Index

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All Classes and Interfaces|All Packages|Constant Field Values|Serialized Form

$

$delimlen - Variable in class si.ijs.kt.clus.util.jeans.util.MultiDelimStringTokenizer
 
$delimpos - Variable in class si.ijs.kt.clus.util.jeans.util.MultiDelimStringTokenizer
 
$delims - Variable in class si.ijs.kt.clus.util.jeans.util.MultiDelimStringTokenizer
 
$example_delims - Static variable in class si.ijs.kt.clus.util.jeans.util.MultiDelimStringTokenizer
 
$lastdelim - Variable in class si.ijs.kt.clus.util.jeans.util.MultiDelimStringTokenizer
 
$len - Variable in class si.ijs.kt.clus.util.jeans.util.MultiDelimStringTokenizer
 
$line - Variable in class si.ijs.kt.clus.util.jeans.util.MultiDelimStringTokenizer
 
$mainargs - Variable in class si.ijs.kt.clus.util.jeans.util.cmdline.CMDLineArgs
 
$ok - Variable in class si.ijs.kt.clus.util.jeans.util.cmdline.CMDLineArgs
 
$optargs - Variable in class si.ijs.kt.clus.util.jeans.util.cmdline.CMDLineArgs
 
$pos - Variable in class si.ijs.kt.clus.util.jeans.util.MultiDelimStringTokenizer
 
$prov - Variable in class si.ijs.kt.clus.util.jeans.util.cmdline.CMDLineArgs
 

A

AbsoluteError - Class in si.ijs.kt.clus.error
 
AbsoluteError(ClusErrorList, NumericAttrType[]) - Constructor for class si.ijs.kt.clus.error.AbsoluteError
 
AbsoluteError(ClusErrorList, NumericAttrType[], String) - Constructor for class si.ijs.kt.clus.error.AbsoluteError
 
ABUNDANCE_SEPARATOR - Static variable in class si.ijs.kt.clus.ext.hierarchical.ClassesValue
 
AccCovWeighted - Enum constant in enum class si.ijs.kt.clus.main.settings.section.SettingsRules.RulePredictionMethod
Each rule's prediction has a weight proportional a product of to its accuracy on the total learning set and its coverage
accept(File, String) - Method in class si.ijs.kt.clus.util.jeans.util.ExtensionFilter
Test if a given File is accepted by this Filter.
Accuracy - Class in si.ijs.kt.clus.error
 
Accuracy - Class in si.ijs.kt.clus.error.sets
 
Accuracy(ClusErrorList, SetAttrType[], ClusAttributeWeights, boolean, ClusDistance) - Constructor for class si.ijs.kt.clus.error.sets.Accuracy
 
Accuracy(ClusErrorList, SetAttrType[], ClusAttributeWeights, ClusDistance) - Constructor for class si.ijs.kt.clus.error.sets.Accuracy
 
Accuracy(ClusErrorList, SetAttrType[], ClusDistance) - Constructor for class si.ijs.kt.clus.error.sets.Accuracy
 
Accuracy(ClusErrorList, NominalAttrType[]) - Constructor for class si.ijs.kt.clus.error.Accuracy
 
Accuracy(ClusErrorList, NominalAttrType[], String) - Constructor for class si.ijs.kt.clus.error.Accuracy
 
AccuracyWeighted - Enum constant in enum class si.ijs.kt.clus.main.settings.section.SettingsRules.RulePredictionMethod
Each rule's prediction has a weight proportional to its accuracy on the total learning set TODO Not yet implemented.
actionPerformed(ActionEvent) - Method in class si.ijs.kt.clus.addon.ILevelC.ilevelc.ILevelCGUI.ClosureListener
 
actionPerformed(ActionEvent) - Method in class si.ijs.kt.clus.addon.ILevelC.ilevelc.ILevelCGUI.LoadListener
 
actionPerformed(ActionEvent) - Method in class si.ijs.kt.clus.addon.ILevelC.ilevelc.ILevelCGUI.SaveListener
 
adaptToData(RowData) - Method in class si.ijs.kt.clus.algo.tdidt.ClusNode
 
add(boolean[]) - Method in class si.ijs.kt.clus.util.jeans.util.IntervalCollection
 
add(double[], double[]) - Static method in class si.ijs.kt.clus.util.jeans.util.array.MDoubleArray
 
add(double[], double[], double) - Static method in class si.ijs.kt.clus.util.jeans.util.array.MDoubleArray
 
add(int, int) - Method in class si.ijs.kt.clus.selection.XValGroup
 
add(ClusRule) - Method in class si.ijs.kt.clus.algo.rules.ClusRuleSet
Add given rule to this rule set
add(DataTuple) - Method in class si.ijs.kt.clus.data.rows.RowData
 
add(RowData) - Method in class si.ijs.kt.clus.data.rows.RowData
 
add(BinaryPredictionList) - Method in class si.ijs.kt.clus.error.BinaryPredictionList
 
add(ClusError) - Method in class si.ijs.kt.clus.error.AbsoluteError
 
add(ClusError) - Method in class si.ijs.kt.clus.error.Accuracy
 
add(ClusError) - Method in class si.ijs.kt.clus.error.AvgDistancesError
 
add(ClusError) - Method in class si.ijs.kt.clus.error.ClusSumError
 
add(ClusError) - Method in class si.ijs.kt.clus.error.common.ClusError
 
add(ClusError) - Method in class si.ijs.kt.clus.error.common.multiscore.MultiScoreWrapper
 
add(ClusError) - Method in class si.ijs.kt.clus.error.ContingencyTable
 
add(ClusError) - Method in class si.ijs.kt.clus.error.hmlc.HierClassWiseAccuracy
 
add(ClusError) - Method in class si.ijs.kt.clus.error.hmlc.HierErrorMeasures
 
add(ClusError) - Method in class si.ijs.kt.clus.error.hmlc.HierLevelAccuracy
 
add(ClusError) - Method in class si.ijs.kt.clus.error.mlc.AveragePrecision
 
add(ClusError) - Method in class si.ijs.kt.clus.error.mlc.Coverage
 
add(ClusError) - Method in class si.ijs.kt.clus.error.mlc.HammingLoss
 
add(ClusError) - Method in class si.ijs.kt.clus.error.mlc.MacroFOne
 
add(ClusError) - Method in class si.ijs.kt.clus.error.mlc.MacroPrecision
 
add(ClusError) - Method in class si.ijs.kt.clus.error.mlc.MacroRecall
 
add(ClusError) - Method in class si.ijs.kt.clus.error.mlc.MicroFOne
 
add(ClusError) - Method in class si.ijs.kt.clus.error.mlc.MicroPrecision
 
add(ClusError) - Method in class si.ijs.kt.clus.error.mlc.MicroRecall
 
add(ClusError) - Method in class si.ijs.kt.clus.error.mlc.MLAccuracy
 
add(ClusError) - Method in class si.ijs.kt.clus.error.mlc.MLFOneMeasure
 
add(ClusError) - Method in class si.ijs.kt.clus.error.mlc.MLPrecision
 
add(ClusError) - Method in class si.ijs.kt.clus.error.mlc.MLRecall
 
add(ClusError) - Method in class si.ijs.kt.clus.error.mlc.MLROCAndPRCurve
 
add(ClusError) - Method in class si.ijs.kt.clus.error.mlc.OneError
 
add(ClusError) - Method in class si.ijs.kt.clus.error.mlc.RankingLoss
 
add(ClusError) - Method in class si.ijs.kt.clus.error.mlc.SubsetAccuracy
 
add(ClusError) - Method in class si.ijs.kt.clus.error.mlcForHmlc.MlcMeasuresForHmlc
 
add(ClusError) - Method in class si.ijs.kt.clus.error.MSError
 
add(ClusError) - Method in class si.ijs.kt.clus.error.MSNominalError
 
add(ClusError) - Method in class si.ijs.kt.clus.error.PearsonCorrelation
 
add(ClusError) - Method in class si.ijs.kt.clus.error.RRMSError
 
add(ClusError) - Method in class si.ijs.kt.clus.error.sets.Accuracy
 
add(ClusError) - Method in class si.ijs.kt.clus.error.sets.F1Score
 
add(ClusError) - Method in class si.ijs.kt.clus.error.sets.HammingLossError
 
add(ClusError) - Method in class si.ijs.kt.clus.error.sets.Precision
 
add(ClusError) - Method in class si.ijs.kt.clus.error.sets.Recall
 
add(ClusError) - Method in class si.ijs.kt.clus.error.sets.SubsetAccuracy
 
add(ClusError) - Method in class si.ijs.kt.clus.error.SpearmanRankCorrelation
 
add(ClusError) - Method in class si.ijs.kt.clus.error.WAHNDError
 
add(ClusError) - Method in class si.ijs.kt.clus.ext.ilevelc.ILevelCRandIndex
 
add(ClusErrorList) - Method in class si.ijs.kt.clus.error.common.ClusErrorList
 
add(MlcHmlcSubError) - Method in class si.ijs.kt.clus.error.mlcForHmlc.AveragePrecision
 
add(MlcHmlcSubError) - Method in class si.ijs.kt.clus.error.mlcForHmlc.Coverage
 
add(MlcHmlcSubError) - Method in class si.ijs.kt.clus.error.mlcForHmlc.HammingLoss
 
add(MlcHmlcSubError) - Method in class si.ijs.kt.clus.error.mlcForHmlc.MacroFOne
 
add(MlcHmlcSubError) - Method in class si.ijs.kt.clus.error.mlcForHmlc.MacroPrecision
 
add(MlcHmlcSubError) - Method in class si.ijs.kt.clus.error.mlcForHmlc.MacroRecall
 
add(MlcHmlcSubError) - Method in class si.ijs.kt.clus.error.mlcForHmlc.MicroFOne
 
add(MlcHmlcSubError) - Method in class si.ijs.kt.clus.error.mlcForHmlc.MicroPrecision
 
add(MlcHmlcSubError) - Method in class si.ijs.kt.clus.error.mlcForHmlc.MicroRecall
 
add(MlcHmlcSubError) - Method in class si.ijs.kt.clus.error.mlcForHmlc.MLAccuracy
 
add(MlcHmlcSubError) - Method in class si.ijs.kt.clus.error.mlcForHmlc.MLaverageAUPRC
 
add(MlcHmlcSubError) - Method in class si.ijs.kt.clus.error.mlcForHmlc.MLaverageAUROC
 
add(MlcHmlcSubError) - Method in interface si.ijs.kt.clus.error.mlcForHmlc.MlcHmlcSubError
 
add(MlcHmlcSubError) - Method in class si.ijs.kt.clus.error.mlcForHmlc.MLFOneMeasure
 
add(MlcHmlcSubError) - Method in class si.ijs.kt.clus.error.mlcForHmlc.MLpooledAUPRC
 
add(MlcHmlcSubError) - Method in class si.ijs.kt.clus.error.mlcForHmlc.MLPrecision
 
add(MlcHmlcSubError) - Method in class si.ijs.kt.clus.error.mlcForHmlc.MLRecall
 
add(MlcHmlcSubError) - Method in class si.ijs.kt.clus.error.mlcForHmlc.MLROCAndPRCurve
 
add(MlcHmlcSubError) - Method in class si.ijs.kt.clus.error.mlcForHmlc.MLweightedAUPRC
 
add(MlcHmlcSubError) - Method in class si.ijs.kt.clus.error.mlcForHmlc.OneError
 
add(MlcHmlcSubError) - Method in class si.ijs.kt.clus.error.mlcForHmlc.RankingLoss
 
add(MlcHmlcSubError) - Method in class si.ijs.kt.clus.error.mlcForHmlc.SubsetAccuracy
 
add(ClusModelInfo) - Method in class si.ijs.kt.clus.model.ClusModelInfo
 
add(ClusStatistic) - Method in class si.ijs.kt.clus.error.common.multiscore.MultiScoreStat
 
add(ClusStatistic) - Method in class si.ijs.kt.clus.ext.beamsearch.ClusBeamSimClassStat
 
add(ClusStatistic) - Method in class si.ijs.kt.clus.ext.beamsearch.ClusBeamSimRegrStat
 
add(ClusStatistic) - Method in class si.ijs.kt.clus.ext.timeseries.TimeSeriesStat
 
add(ClusStatistic) - Method in class si.ijs.kt.clus.statistic.BitVectorStat
 
add(ClusStatistic) - Method in class si.ijs.kt.clus.statistic.ClassificationStat
 
add(ClusStatistic) - Method in class si.ijs.kt.clus.statistic.ClusStatistic
 
add(ClusStatistic) - Method in class si.ijs.kt.clus.statistic.CombStat
 
add(ClusStatistic) - Method in class si.ijs.kt.clus.statistic.CombStatClassRegHier
 
add(ClusStatistic) - Method in class si.ijs.kt.clus.statistic.GeneticDistanceStat
 
add(ClusStatistic) - Method in class si.ijs.kt.clus.statistic.GISStat
Deprecated.
 
add(ClusStatistic) - Method in class si.ijs.kt.clus.statistic.HierSumPairwiseDistancesStat
 
add(ClusStatistic) - Method in class si.ijs.kt.clus.statistic.RegressionStat
 
add(ClusStatistic) - Method in class si.ijs.kt.clus.statistic.RegressionStatBinaryNomiss
 
add(BitList) - Method in class si.ijs.kt.clus.util.jeans.list.BitList
 
add(MNumber) - Method in class si.ijs.kt.clus.util.jeans.math.MNumber
 
add_sym(int, int, double) - Method in class si.ijs.kt.clus.util.jeans.math.matrix.MSymMatrix
 
add_to_group(int, XValGroup[], int, int) - Method in class si.ijs.kt.clus.selection.XValRandomSelection
 
addAll(Collection) - Method in class si.ijs.kt.clus.ext.beamsearch.ClusBeamTreeElem
 
addAll(Collection) - Method in class si.ijs.kt.clus.ext.beamsearch.ClusBeamTreeElemOld
 
addAll(RowData, RowData) - Method in class si.ijs.kt.clus.data.rows.RowData
 
addAll(ClassTerm, MyArray) - Static method in class si.ijs.kt.clus.util.tools.hier.GenerateData
Deprecated.
 
addAllClasses(ClassesTuple, boolean[]) - Method in class si.ijs.kt.clus.ext.hierarchical.ClassHierarchy
 
addAlphaVectorAndFrequencyvector(double[], int[]) - Method in class si.ijs.kt.clus.heuristic.EncodingCost
 
addAlternativeBest(NodeTest) - Method in class si.ijs.kt.clus.algo.split.CurrentBestTestAndHeuristic
 
addAttribute(ClusSchema, String, String, HashMap<String, int[]>) - Method in class si.ijs.kt.clus.data.io.ARFFFile
 
addAttribute(ClusSerializable) - Method in class si.ijs.kt.clus.data.io.ClusView
 
addAttributes(ClassTerm, MyArray) - Static method in class si.ijs.kt.clus.util.tools.hier.GenerateData
Deprecated.
 
addAttrType(ClusAttrType) - Method in class si.ijs.kt.clus.data.ClusSchema
 
addBestNominalTest(NominalAttrType, RowData, ClusStatistic, ClusRandomNonstatic) - Method in class si.ijs.kt.clus.ext.optiontree.FindBestTests
 
addBestNumericTest(ClusAttrType, RowData, ClusStatistic, ClusRandomNonstatic) - Method in class si.ijs.kt.clus.ext.optiontree.FindBestTests
 
addCannotLinkConstraints(HashSet, ArrayList[]) - Method in class si.ijs.kt.clus.ext.ilevelc.DerivedConstraintsComputer
 
addCheckModelProcessor(int, ClusModelProcessor) - Method in class si.ijs.kt.clus.model.ClusModelInfo
 
addCheckModelProcessor(ClusModelProcessor) - Method in class si.ijs.kt.clus.model.processor.ModelProcessorCollection
 
addChild(ClusROSModelInfo) - Method in class si.ijs.kt.clus.ext.ensemble.ros.ClusROSModelInfo
 
addChild(ClusHMTRNode) - Method in class si.ijs.kt.clus.ext.hierarchicalmtr.ClusHMTRNode
 
addChild(MyNode) - Method in class si.ijs.kt.clus.ext.optiontree.MyNode
 
addChild(Node) - Method in class si.ijs.kt.clus.ext.hierarchical.ClassTerm
 
addChild(Node) - Method in class si.ijs.kt.clus.util.jeans.tree.BinaryNode
 
addChild(Node) - Method in class si.ijs.kt.clus.util.jeans.tree.MyNode
 
addChild(Node) - Method in interface si.ijs.kt.clus.util.jeans.tree.Node
 
addChild(Node) - Method in class si.ijs.kt.clus.util.jeans.tree.SimpleNode
 
addChild(Node) - Method in class si.ijs.kt.clus.util.jeans.tree.VisitableNode
 
addChildCheckAndParent(ClassTerm) - Method in class si.ijs.kt.clus.ext.hierarchical.ClassTerm
 
addChildrenToRoot() - Method in class si.ijs.kt.clus.ext.hierarchical.ClassHierarchy
 
addChildStats() - Method in class si.ijs.kt.clus.algo.tdidt.ClusNode
 
addClass(ClassesValue) - Method in class si.ijs.kt.clus.ext.hierarchical.ClassHierarchy
 
addClass(ClassesValue, int, ClassHierarchy) - Method in class si.ijs.kt.clus.ext.hierarchical.ClassTerm
 
addClasses(ClassTerm, MyArray) - Static method in class si.ijs.kt.clus.util.tools.hier.GenerateData
Deprecated.
 
addClassTerm(String, ClassTerm) - Method in class si.ijs.kt.clus.ext.hierarchical.ClassHierarchy
 
addClassTerm(ClassTerm) - Method in class si.ijs.kt.clus.ext.hierarchical.ClassHierarchy
 
addComponent(ClusError) - Method in class si.ijs.kt.clus.error.ClusSumError
 
addData(DataTuple) - Method in class si.ijs.kt.clus.ext.ilevelc.COPKMeansCluster
 
addData(RowData) - Method in class si.ijs.kt.clus.statistic.ClusStatistic
 
addDataToRules(DataTuple) - Method in class si.ijs.kt.clus.algo.rules.ClusRuleSet
Adds tuple to the rule which covers it.
addDataToRules(RowData) - Method in class si.ijs.kt.clus.algo.rules.ClusRuleSet
Adds the data tuples to rules which cover them.
addDataTuple(DataTuple) - Method in class si.ijs.kt.clus.algo.rules.ClusRule
Adds the tuple to the m_Data array
addDefaultRuleToRuleSet() - Method in class si.ijs.kt.clus.algo.rules.ClusRuleSet
For optimization, we need to make the default rule a real rule.
addDistToCandOpt(ClusBeam, ClusBeamModel) - Method in class si.ijs.kt.clus.ext.beamsearch.ClusBeamModelDistance
 
addDouble(double) - Method in class si.ijs.kt.clus.util.jeans.math.MDouble
 
addElement(int) - Method in class si.ijs.kt.clus.util.jeans.util.array.MyIntArray
 
addElement(Object) - Method in class si.ijs.kt.clus.util.jeans.util.MyArray
 
addEnd(MyList) - Method in class si.ijs.kt.clus.util.jeans.util.list.MyListIter
 
addEnsemblePredictionWriter(int, ClusEnsemblePredictionWriter) - Method in class si.ijs.kt.clus.model.ClusModelInfo
 
addError(ClusError) - Method in class si.ijs.kt.clus.error.common.ClusErrorList
 
addError(ClusErrorList, int) - Method in class si.ijs.kt.clus.algo.rules.ClusRule
 
addErrors(ClusErrorList) - Method in class si.ijs.kt.clus.error.common.ClusErrorList
 
addErrs(double, double, double) - Method in class si.ijs.kt.clus.pruning.C45Pruner
 
addExample() - Method in class si.ijs.kt.clus.error.common.ClusErrorList
 
addExample(boolean[], double[], boolean[]) - Method in class si.ijs.kt.clus.error.mlcForHmlc.AveragePrecision
 
addExample(boolean[], double[], boolean[]) - Method in class si.ijs.kt.clus.error.mlcForHmlc.Coverage
 
addExample(boolean[], double[], boolean[]) - Method in class si.ijs.kt.clus.error.mlcForHmlc.HammingLoss
 
addExample(boolean[], double[], boolean[]) - Method in class si.ijs.kt.clus.error.mlcForHmlc.MacroFOne
 
addExample(boolean[], double[], boolean[]) - Method in class si.ijs.kt.clus.error.mlcForHmlc.MacroPrecision
 
addExample(boolean[], double[], boolean[]) - Method in class si.ijs.kt.clus.error.mlcForHmlc.MacroRecall
 
addExample(boolean[], double[], boolean[]) - Method in class si.ijs.kt.clus.error.mlcForHmlc.MicroFOne
 
addExample(boolean[], double[], boolean[]) - Method in class si.ijs.kt.clus.error.mlcForHmlc.MicroPrecision
 
addExample(boolean[], double[], boolean[]) - Method in class si.ijs.kt.clus.error.mlcForHmlc.MicroRecall
 
addExample(boolean[], double[], boolean[]) - Method in class si.ijs.kt.clus.error.mlcForHmlc.MLAccuracy
 
addExample(boolean[], double[], boolean[]) - Method in interface si.ijs.kt.clus.error.mlcForHmlc.MlcHmlcSubError
 
addExample(boolean[], double[], boolean[]) - Method in class si.ijs.kt.clus.error.mlcForHmlc.MLFOneMeasure
 
addExample(boolean[], double[], boolean[]) - Method in class si.ijs.kt.clus.error.mlcForHmlc.MLPrecision
 
addExample(boolean[], double[], boolean[]) - Method in class si.ijs.kt.clus.error.mlcForHmlc.MLRecall
 
addExample(boolean[], double[], boolean[]) - Method in class si.ijs.kt.clus.error.mlcForHmlc.MLROCAndPRCurve
 
addExample(boolean[], double[], boolean[]) - Method in class si.ijs.kt.clus.error.mlcForHmlc.OneError
 
addExample(boolean[], double[], boolean[]) - Method in class si.ijs.kt.clus.error.mlcForHmlc.RankingLoss
 
addExample(boolean[], double[], boolean[]) - Method in class si.ijs.kt.clus.error.mlcForHmlc.SubsetAccuracy
 
addExample(boolean, double) - Method in class si.ijs.kt.clus.error.BinaryPredictionList
Updates the binary-classification statistics.
addExample(double[], boolean[]) - Method in class si.ijs.kt.clus.error.MSError
 
addExample(double[], boolean[]) - Method in class si.ijs.kt.clus.error.RRMSError
 
addExample(double[], boolean[], boolean) - Method in class si.ijs.kt.clus.error.MSError
 
addExample(double[], double[]) - Method in class si.ijs.kt.clus.error.AbsoluteError
 
addExample(double[], double[]) - Method in class si.ijs.kt.clus.error.common.ClusNumericError
 
addExample(double[], double[]) - Method in class si.ijs.kt.clus.error.common.ClusSetError
 
addExample(double[], double[]) - Method in class si.ijs.kt.clus.error.common.multiscore.MultiScoreWrapper
 
addExample(double[], double[]) - Method in class si.ijs.kt.clus.error.MSError
 
addExample(double[], double[]) - Method in class si.ijs.kt.clus.error.PearsonCorrelation
 
addExample(double[], double[]) - Method in class si.ijs.kt.clus.error.RelativeError
 
addExample(double[], double[]) - Method in class si.ijs.kt.clus.error.RRMSError
 
addExample(double[], double[]) - Method in class si.ijs.kt.clus.error.sets.Accuracy
 
addExample(double[], double[]) - Method in class si.ijs.kt.clus.error.sets.F1Score
 
addExample(double[], double[]) - Method in class si.ijs.kt.clus.error.sets.HammingLossError
 
addExample(double[], double[]) - Method in class si.ijs.kt.clus.error.sets.Precision
 
addExample(double[], double[]) - Method in class si.ijs.kt.clus.error.sets.Recall
 
addExample(double[], double[]) - Method in class si.ijs.kt.clus.error.sets.SubsetAccuracy
 
addExample(double[], double[]) - Method in class si.ijs.kt.clus.error.SpearmanRankCorrelation
 
addExample(double[], double[]) - Method in class si.ijs.kt.clus.error.SpearmanRankCorrelationPerExample
 
addExample(double[], double[], boolean) - Method in class si.ijs.kt.clus.error.MSError
 
addExample(int, int) - Method in class si.ijs.kt.clus.error.NominalCorrelation
 
addExample(ClusData, int, ClusStatistic) - Method in class si.ijs.kt.clus.error.WAHNDError
 
addExample(DataTuple, DataTuple) - Method in class si.ijs.kt.clus.error.Accuracy
 
addExample(DataTuple, DataTuple) - Method in class si.ijs.kt.clus.error.ClusSumError
 
addExample(DataTuple, DataTuple) - Method in class si.ijs.kt.clus.error.common.ClusError
 
addExample(DataTuple, DataTuple) - Method in class si.ijs.kt.clus.error.common.ClusErrorList
 
addExample(DataTuple, DataTuple) - Method in class si.ijs.kt.clus.error.mlc.AveragePrecision
 
addExample(DataTuple, DataTuple) - Method in class si.ijs.kt.clus.error.mlc.Coverage
 
addExample(DataTuple, DataTuple) - Method in class si.ijs.kt.clus.error.mlc.HammingLoss
 
addExample(DataTuple, DataTuple) - Method in class si.ijs.kt.clus.error.mlc.MacroFOne
 
addExample(DataTuple, DataTuple) - Method in class si.ijs.kt.clus.error.mlc.MacroPrecision
 
addExample(DataTuple, DataTuple) - Method in class si.ijs.kt.clus.error.mlc.MacroRecall
 
addExample(DataTuple, DataTuple) - Method in class si.ijs.kt.clus.error.mlc.MicroFOne
 
addExample(DataTuple, DataTuple) - Method in class si.ijs.kt.clus.error.mlc.MicroPrecision
 
addExample(DataTuple, DataTuple) - Method in class si.ijs.kt.clus.error.mlc.MicroRecall
 
addExample(DataTuple, DataTuple) - Method in class si.ijs.kt.clus.error.mlc.MLAccuracy
 
addExample(DataTuple, DataTuple) - Method in class si.ijs.kt.clus.error.mlc.MLFOneMeasure
 
addExample(DataTuple, DataTuple) - Method in class si.ijs.kt.clus.error.mlc.MLPrecision
 
addExample(DataTuple, DataTuple) - Method in class si.ijs.kt.clus.error.mlc.MLRecall
 
addExample(DataTuple, DataTuple) - Method in class si.ijs.kt.clus.error.mlc.MLROCAndPRCurve
 
addExample(DataTuple, DataTuple) - Method in class si.ijs.kt.clus.error.mlc.OneError
 
addExample(DataTuple, DataTuple) - Method in class si.ijs.kt.clus.error.mlc.RankingLoss
 
addExample(DataTuple, DataTuple) - Method in class si.ijs.kt.clus.error.mlc.SubsetAccuracy
 
addExample(DataTuple, DataTuple) - Method in class si.ijs.kt.clus.error.MSError
 
addExample(DataTuple, DataTuple) - Method in class si.ijs.kt.clus.error.PearsonCorrelation
 
addExample(DataTuple, DataTuple) - Method in class si.ijs.kt.clus.error.RelativeError
 
addExample(DataTuple, DataTuple) - Method in class si.ijs.kt.clus.error.RRMSError
 
addExample(DataTuple, DataTuple) - Method in class si.ijs.kt.clus.error.sets.Accuracy
 
addExample(DataTuple, DataTuple) - Method in class si.ijs.kt.clus.error.sets.F1Score
 
addExample(DataTuple, DataTuple) - Method in class si.ijs.kt.clus.error.sets.HammingLossError
 
addExample(DataTuple, DataTuple) - Method in class si.ijs.kt.clus.error.sets.Precision
 
addExample(DataTuple, DataTuple) - Method in class si.ijs.kt.clus.error.sets.Recall
 
addExample(DataTuple, DataTuple) - Method in class si.ijs.kt.clus.error.sets.SubsetAccuracy
 
addExample(DataTuple, DataTuple) - Method in class si.ijs.kt.clus.error.SpearmanRankCorrelation
 
addExample(DataTuple, DataTuple) - Method in class si.ijs.kt.clus.error.SpearmanRankCorrelationPerExample
 
addExample(DataTuple, DataTuple, boolean) - Method in class si.ijs.kt.clus.error.MSError
 
addExample(DataTuple, ClusStatistic) - Method in class si.ijs.kt.clus.error.AbsoluteError
 
addExample(DataTuple, ClusStatistic) - Method in class si.ijs.kt.clus.error.Accuracy
 
addExample(DataTuple, ClusStatistic) - Method in class si.ijs.kt.clus.error.AvgDistancesError
 
addExample(DataTuple, ClusStatistic) - Method in class si.ijs.kt.clus.error.ClusSumError
 
addExample(DataTuple, ClusStatistic) - Method in class si.ijs.kt.clus.error.common.ClusError
 
addExample(DataTuple, ClusStatistic) - Method in class si.ijs.kt.clus.error.common.ClusErrorList
 
addExample(DataTuple, ClusStatistic) - Method in class si.ijs.kt.clus.error.common.multiscore.MultiScoreWrapper
 
addExample(DataTuple, ClusStatistic) - Method in class si.ijs.kt.clus.error.ContingencyTable
 
addExample(DataTuple, ClusStatistic) - Method in class si.ijs.kt.clus.error.hmlc.HierClassWiseAccuracy
 
addExample(DataTuple, ClusStatistic) - Method in class si.ijs.kt.clus.error.hmlc.HierErrorMeasures
 
addExample(DataTuple, ClusStatistic) - Method in class si.ijs.kt.clus.error.hmlc.HierLevelAccuracy
 
addExample(DataTuple, ClusStatistic) - Method in class si.ijs.kt.clus.error.hmlc.HierRMSError
 
addExample(DataTuple, ClusStatistic) - Method in class si.ijs.kt.clus.error.mlc.AveragePrecision
 
addExample(DataTuple, ClusStatistic) - Method in class si.ijs.kt.clus.error.mlc.Coverage
 
addExample(DataTuple, ClusStatistic) - Method in class si.ijs.kt.clus.error.mlc.HammingLoss
 
addExample(DataTuple, ClusStatistic) - Method in class si.ijs.kt.clus.error.mlc.MacroFOne
 
addExample(DataTuple, ClusStatistic) - Method in class si.ijs.kt.clus.error.mlc.MacroPrecision
 
addExample(DataTuple, ClusStatistic) - Method in class si.ijs.kt.clus.error.mlc.MacroRecall
 
addExample(DataTuple, ClusStatistic) - Method in class si.ijs.kt.clus.error.mlc.MicroFOne
 
addExample(DataTuple, ClusStatistic) - Method in class si.ijs.kt.clus.error.mlc.MicroPrecision
 
addExample(DataTuple, ClusStatistic) - Method in class si.ijs.kt.clus.error.mlc.MicroRecall
 
addExample(DataTuple, ClusStatistic) - Method in class si.ijs.kt.clus.error.mlc.MLAccuracy
 
addExample(DataTuple, ClusStatistic) - Method in class si.ijs.kt.clus.error.mlc.MLFOneMeasure
 
addExample(DataTuple, ClusStatistic) - Method in class si.ijs.kt.clus.error.mlc.MLPrecision
 
addExample(DataTuple, ClusStatistic) - Method in class si.ijs.kt.clus.error.mlc.MLRecall
 
addExample(DataTuple, ClusStatistic) - Method in class si.ijs.kt.clus.error.mlc.MLROCAndPRCurve
 
addExample(DataTuple, ClusStatistic) - Method in class si.ijs.kt.clus.error.mlc.OneError
 
addExample(DataTuple, ClusStatistic) - Method in class si.ijs.kt.clus.error.mlc.RankingLoss
 
addExample(DataTuple, ClusStatistic) - Method in class si.ijs.kt.clus.error.mlc.SubsetAccuracy
 
addExample(DataTuple, ClusStatistic) - Method in class si.ijs.kt.clus.error.mlcForHmlc.MlcMeasuresForHmlc
Will update the statistics for all submeasures.
addExample(DataTuple, ClusStatistic) - Method in class si.ijs.kt.clus.error.MSError
 
addExample(DataTuple, ClusStatistic) - Method in class si.ijs.kt.clus.error.MSNominalError
 
addExample(DataTuple, ClusStatistic) - Method in class si.ijs.kt.clus.error.PearsonCorrelation
 
addExample(DataTuple, ClusStatistic) - Method in class si.ijs.kt.clus.error.RelativeError
 
addExample(DataTuple, ClusStatistic) - Method in class si.ijs.kt.clus.error.RRMSError
 
addExample(DataTuple, ClusStatistic) - Method in class si.ijs.kt.clus.error.sets.Accuracy
 
addExample(DataTuple, ClusStatistic) - Method in class si.ijs.kt.clus.error.sets.F1Score
 
addExample(DataTuple, ClusStatistic) - Method in class si.ijs.kt.clus.error.sets.HammingLossError
 
addExample(DataTuple, ClusStatistic) - Method in class si.ijs.kt.clus.error.sets.Precision
 
addExample(DataTuple, ClusStatistic) - Method in class si.ijs.kt.clus.error.sets.Recall
 
addExample(DataTuple, ClusStatistic) - Method in class si.ijs.kt.clus.error.sets.SubsetAccuracy
 
addExample(DataTuple, ClusStatistic) - Method in class si.ijs.kt.clus.error.SpearmanRankCorrelation
 
addExample(DataTuple, ClusStatistic) - Method in class si.ijs.kt.clus.error.WAHNDError
 
addExample(DataTuple, ClusStatistic) - Method in class si.ijs.kt.clus.ext.ilevelc.ILevelCRandIndex
 
addExample(DataTuple, ClusStatistic, boolean) - Method in class si.ijs.kt.clus.error.MSError
 
addExample(SparseDataTuple) - Method in class si.ijs.kt.clus.data.type.primitive.SparseNumericAttrType
 
addExample(WHTDStatistic) - Method in class si.ijs.kt.clus.ext.hierarchical.thresholdcalibration.calibrateByLabelCardinality
 
addExample(WHTDStatistic) - Method in interface si.ijs.kt.clus.ext.hierarchical.thresholdcalibration.HierThresholdCalibration
 
addExampleToAttributes() - Method in class si.ijs.kt.clus.data.rows.SparseDataTuple
 
addExtension(String, String) - Static method in class si.ijs.kt.clus.util.jeans.util.FileUtil
Add an Extension to a given File name.
addFloat(double) - Method in class si.ijs.kt.clus.util.jeans.math.SingleStat
 
addFloat(double) - Method in class si.ijs.kt.clus.util.jeans.math.SingleStatList
 
addFold(int, int, String, String, String, double, String, Long) - Method in class si.ijs.kt.clus.addon.sit.ErrorOutput
 
addFoldAllErrors(int, int, String, String, String, MSError, String, Long) - Method in class si.ijs.kt.clus.addon.sit.ErrorOutput
 
addFoldNrs(RowData, XValMainSelection) - Method in class si.ijs.kt.clus.ext.optxval.OptXVal
Deprecated.
 
addFromString(String) - Method in class si.ijs.kt.clus.data.ClusSchema
 
addHierarchyIndices(ClassHierarchy) - Method in class si.ijs.kt.clus.ext.hierarchical.ClassesTuple
 
addHierarchyIndices(ClassHierarchy) - Method in class si.ijs.kt.clus.ext.hierarchical.ClassesValue
 
addHMTRTargets(ClusSchema, ClusHMTRHierarchy) - Method in class si.ijs.kt.clus.main.settings.section.SettingsHMTR
 
addIfNotIn(Comparable) - Method in class si.ijs.kt.clus.ext.beamsearch.ClusBeamTreeElem
 
addIfNotIn(Comparable) - Method in class si.ijs.kt.clus.ext.beamsearch.ClusBeamTreeElemOld
 
addIfNotIn(ClusBeamModel) - Method in class si.ijs.kt.clus.ext.beamsearch.ClusBeam
 
addIfNotIn(ClusBeamModel) - Method in class si.ijs.kt.clus.ext.exhaustivesearch.ClusExhaustive
 
addIfUnique(ClusRule) - Method in class si.ijs.kt.clus.algo.rules.ClusRuleSet
Add given rule if it is not already in the rule set.
addIfUniqueDeeply(ClusRule) - Method in class si.ijs.kt.clus.algo.rules.ClusRuleSet
Add given rule if it is not already in the rule set.
addImplicitLinearTermsExplicitly(ArrayList<Double>, int) - Method in class si.ijs.kt.clus.algo.rules.ClusRuleSet
If used implicit linear term usage, add the linear terms with great enough weight.
addIndices() - Method in class si.ijs.kt.clus.data.rows.RowData
 
addIndices(int) - Method in class si.ijs.kt.clus.data.ClusSchema
 
addIntermediateElems(ClassHierarchy, boolean[], ArrayList<ClassesValue>) - Method in class si.ijs.kt.clus.ext.hierarchical.ClassesTuple
 
addIntermediateLabels(RowData, ClassHierarchy) - Method in class si.ijs.kt.clus.addon.hmc.HMCConvertDAGData.HMCConvertDAGData
 
addInterval(int, int) - Method in class si.ijs.kt.clus.util.jeans.util.IntervalCollection
 
addInvalid(boolean) - Method in class si.ijs.kt.clus.error.BinaryPredictionList
 
addInvalid(DataTuple) - Method in class si.ijs.kt.clus.error.AbsoluteError
 
addInvalid(DataTuple) - Method in class si.ijs.kt.clus.error.Accuracy
 
addInvalid(DataTuple) - Method in class si.ijs.kt.clus.error.AvgDistancesError
 
addInvalid(DataTuple) - Method in class si.ijs.kt.clus.error.ClusSumError
 
addInvalid(DataTuple) - Method in class si.ijs.kt.clus.error.common.ClusError
 
addInvalid(DataTuple) - Method in class si.ijs.kt.clus.error.common.multiscore.MultiScoreWrapper
 
addInvalid(DataTuple) - Method in class si.ijs.kt.clus.error.ContingencyTable
 
addInvalid(DataTuple) - Method in class si.ijs.kt.clus.error.hmlc.HierClassWiseAccuracy
 
addInvalid(DataTuple) - Method in class si.ijs.kt.clus.error.hmlc.HierErrorMeasures
 
addInvalid(DataTuple) - Method in class si.ijs.kt.clus.error.hmlc.HierLevelAccuracy
 
addInvalid(DataTuple) - Method in class si.ijs.kt.clus.error.mlc.AveragePrecision
 
addInvalid(DataTuple) - Method in class si.ijs.kt.clus.error.mlc.Coverage
 
addInvalid(DataTuple) - Method in class si.ijs.kt.clus.error.mlc.HammingLoss
 
addInvalid(DataTuple) - Method in class si.ijs.kt.clus.error.mlc.MacroFOne
 
addInvalid(DataTuple) - Method in class si.ijs.kt.clus.error.mlc.MacroPrecision
 
addInvalid(DataTuple) - Method in class si.ijs.kt.clus.error.mlc.MacroRecall
 
addInvalid(DataTuple) - Method in class si.ijs.kt.clus.error.mlc.MicroFOne
 
addInvalid(DataTuple) - Method in class si.ijs.kt.clus.error.mlc.MicroPrecision
 
addInvalid(DataTuple) - Method in class si.ijs.kt.clus.error.mlc.MicroRecall
 
addInvalid(DataTuple) - Method in class si.ijs.kt.clus.error.mlc.MLAccuracy
 
addInvalid(DataTuple) - Method in class si.ijs.kt.clus.error.mlc.MLFOneMeasure
 
addInvalid(DataTuple) - Method in class si.ijs.kt.clus.error.mlc.MLPrecision
 
addInvalid(DataTuple) - Method in class si.ijs.kt.clus.error.mlc.MLRecall
 
addInvalid(DataTuple) - Method in class si.ijs.kt.clus.error.mlc.MLROCAndPRCurve
 
addInvalid(DataTuple) - Method in class si.ijs.kt.clus.error.mlc.OneError
 
addInvalid(DataTuple) - Method in class si.ijs.kt.clus.error.mlc.RankingLoss
 
addInvalid(DataTuple) - Method in class si.ijs.kt.clus.error.mlc.SubsetAccuracy
 
addInvalid(DataTuple) - Method in class si.ijs.kt.clus.error.mlcForHmlc.MlcMeasuresForHmlc
 
addInvalid(DataTuple) - Method in class si.ijs.kt.clus.error.MSError
 
addInvalid(DataTuple) - Method in class si.ijs.kt.clus.error.MSNominalError
 
addInvalid(DataTuple) - Method in class si.ijs.kt.clus.error.PearsonCorrelation
 
addInvalid(DataTuple) - Method in class si.ijs.kt.clus.error.sets.Accuracy
 
addInvalid(DataTuple) - Method in class si.ijs.kt.clus.error.sets.F1Score
 
addInvalid(DataTuple) - Method in class si.ijs.kt.clus.error.sets.HammingLossError
 
addInvalid(DataTuple) - Method in class si.ijs.kt.clus.error.sets.Precision
 
addInvalid(DataTuple) - Method in class si.ijs.kt.clus.error.sets.Recall
 
addInvalid(DataTuple) - Method in class si.ijs.kt.clus.error.sets.SubsetAccuracy
 
addInvalid(DataTuple) - Method in class si.ijs.kt.clus.error.SpearmanRankCorrelation
 
addInvalid(DataTuple) - Method in class si.ijs.kt.clus.error.WAHNDError
 
addInvalid(DataTuple) - Method in class si.ijs.kt.clus.ext.ilevelc.ILevelCRandIndex
 
addItem(ClassesValue) - Method in class si.ijs.kt.clus.ext.hierarchical.ClassesTuple
 
addLine(String) - Method in class si.ijs.kt.clus.model.test.FakeTest
 
addMean(SingleStat) - Method in class si.ijs.kt.clus.util.jeans.math.SingleStat
 
addModel(ClusBeamModel) - Method in class si.ijs.kt.clus.ext.beamsearch.ClusBeam
 
addModel(ClusModelInfo) - Method in class si.ijs.kt.clus.model.io.ClusModelCollectionIO
 
addModelErrorMeasures(ClusRun) - Method in class si.ijs.kt.clus.Clus
 
addModelInfo(int) - Method in class si.ijs.kt.clus.main.ClusModelInfoList
 
addModelInfo(int, String) - Method in class si.ijs.kt.clus.main.ClusModelInfoList
Analogue of the addModelInfo(int i) which is used in kNN case.
addModelInfo(String) - Method in class si.ijs.kt.clus.main.ClusModelInfoList
 
addModelInfo(ClusModelInfo) - Method in class si.ijs.kt.clus.main.ClusModelInfoList
 
addModelInfo(ClusModelInfo) - Method in class si.ijs.kt.clus.model.processor.ClusModelProcessor
 
addModelInfo(ClusModelInfo) - Method in class si.ijs.kt.clus.model.processor.PredictionWriter
 
addModelProcessor(int, ClusModelProcessor) - Method in class si.ijs.kt.clus.model.ClusModelInfo
 
addModelProcessor(ClusModelProcessor) - Method in class si.ijs.kt.clus.model.processor.ModelProcessorCollection
 
addModelToForest(ClusModel) - Method in class si.ijs.kt.clus.ext.ensemble.ClusForest
 
addModelToForest(ClusModel, double) - Method in class si.ijs.kt.clus.ext.ensemble.ClusBoostingForest
 
addModelToSet(Comparable) - Method in class si.ijs.kt.clus.ext.beamsearch.ClusBeamTreeElemOld
 
addNode(INIFileNode) - Method in class si.ijs.kt.clus.util.jeans.io.ini.INIFile
 
addNode(INIFileNode) - Method in class si.ijs.kt.clus.util.jeans.io.ini.INIFileSection
 
addOOBTuple(DataTuple, ClusModel) - Method in class si.ijs.kt.clus.ext.ensemble.ClusOOBErrorEstimate
 
addOutput(int, int) - Method in class si.ijs.kt.clus.error.ROCAndPRCurve
 
addOutputPR(int, int) - Method in class si.ijs.kt.clus.error.ROCAndPRCurve
 
addOutputROC(int, int) - Method in class si.ijs.kt.clus.error.ROCAndPRCurve
 
addParent(ClassTerm) - Method in class si.ijs.kt.clus.ext.hierarchical.ClassTerm
 
addParentChildTuple(String, String) - Method in class si.ijs.kt.clus.ext.hierarchical.ClassHierarchy
 
addPoint(int, int) - Method in class si.ijs.kt.clus.addon.ILevelC.ilevelc.ILevelCGUI.ILevelCComponent
 
addPoint(ArrayList<SingleStatList>, int, ClusRun[], SizeConstraintPruning[], int, ClusSummary) - Method in class si.ijs.kt.clus.algo.tdidt.tune.CDTuneSizeConstrPruning
 
addPointPR(double, double) - Method in class si.ijs.kt.clus.error.ROCAndPRCurve
 
addPointPROptimized(double, double) - Method in class si.ijs.kt.clus.error.ROCAndPRCurve
 
addPrediction(ClusStatistic, double) - Method in class si.ijs.kt.clus.error.common.multiscore.MultiScoreStat
 
addPrediction(ClusStatistic, double) - Method in class si.ijs.kt.clus.ext.beamsearch.ClusBeamSimClassStat
 
addPrediction(ClusStatistic, double) - Method in class si.ijs.kt.clus.ext.structuredTypes.SetStatistic
 
addPrediction(ClusStatistic, double) - Method in class si.ijs.kt.clus.ext.structuredTypes.TupleStatistic
 
addPrediction(ClusStatistic, double) - Method in class si.ijs.kt.clus.ext.timeseries.TimeSeriesStat
 
addPrediction(ClusStatistic, double) - Method in class si.ijs.kt.clus.statistic.BitVectorStat
 
addPrediction(ClusStatistic, double) - Method in class si.ijs.kt.clus.statistic.ClassificationStat
 
addPrediction(ClusStatistic, double) - Method in class si.ijs.kt.clus.statistic.ClusStatistic
Adds to this target prediction the effect of other statistics with weight considered
addPrediction(ClusStatistic, double) - Method in class si.ijs.kt.clus.statistic.CombStat
 
addPrediction(ClusStatistic, double) - Method in class si.ijs.kt.clus.statistic.CombStatClassRegHier
 
addPrediction(ClusStatistic, double) - Method in class si.ijs.kt.clus.statistic.GeneticDistanceStat
 
addPrediction(ClusStatistic, double) - Method in class si.ijs.kt.clus.statistic.RegressionStatBase
 
addPrediction(ClusStatistic, double) - Method in class si.ijs.kt.clus.statistic.WHTDStatistic
 
addPredictWriterSchema(String, ClusSchema) - Method in class si.ijs.kt.clus.ext.structuredTypes.SetStatistic
 
addPredictWriterSchema(String, ClusSchema) - Method in class si.ijs.kt.clus.ext.structuredTypes.TupleStatistic
 
addPredictWriterSchema(String, ClusSchema) - Method in class si.ijs.kt.clus.ext.timeseries.TimeSeriesStat
 
addPredictWriterSchema(String, ClusSchema) - Method in class si.ijs.kt.clus.statistic.ClassificationStat
 
addPredictWriterSchema(String, ClusSchema) - Method in class si.ijs.kt.clus.statistic.ClusStatistic
 
addPredictWriterSchema(String, ClusSchema) - Method in class si.ijs.kt.clus.statistic.CombStat
 
addPredictWriterSchema(String, ClusSchema) - Method in class si.ijs.kt.clus.statistic.HierSingleLabelStat
 
addPredictWriterSchema(String, ClusSchema) - Method in class si.ijs.kt.clus.statistic.RegressionStatBase
 
addPredictWriterSchema(String, ClusSchema) - Method in class si.ijs.kt.clus.statistic.WHTDStatistic
 
addPreproc(TuplePreproc) - Method in class si.ijs.kt.clus.data.rows.DataPreprocs
 
addResult(TargetSet, RowData[]) - Method in class si.ijs.kt.clus.addon.sit.mtLearner.ResultsCache
 
addROSModelInfo(ClusROSModelInfo) - Method in class si.ijs.kt.clus.ext.ensemble.ros.ClusROSForestInfo
 
addRowsIndex() - Method in class si.ijs.kt.clus.data.ClusSchema
 
addRowWeighted(double[], int, double) - Method in class si.ijs.kt.clus.util.jeans.math.matrix.MSymMatrix
 
addRuleSet(ClusRuleSet) - Method in class si.ijs.kt.clus.algo.rules.ClusRuleSet
Add rules in the given set to this rule set.
addRuleSet(ClusRuleSet, boolean) - Method in class si.ijs.kt.clus.algo.rules.ClusRuleSet
Add rules in the given set to this rule set.
addScaled(double, ClusStatistic) - Method in class si.ijs.kt.clus.error.common.multiscore.MultiScoreStat
 
addScaled(double, ClusStatistic) - Method in class si.ijs.kt.clus.statistic.BitVectorStat
 
addScaled(double, ClusStatistic) - Method in class si.ijs.kt.clus.statistic.ClassificationStat
 
addScaled(double, ClusStatistic) - Method in class si.ijs.kt.clus.statistic.ClusStatistic
 
addScaled(double, ClusStatistic) - Method in class si.ijs.kt.clus.statistic.GeneticDistanceStat
 
addScaled(double, ClusStatistic) - Method in class si.ijs.kt.clus.statistic.GISStat
Deprecated.
 
addScaled(double, ClusStatistic) - Method in class si.ijs.kt.clus.statistic.HierSumPairwiseDistancesStat
 
addScaled(double, ClusStatistic) - Method in class si.ijs.kt.clus.statistic.RegressionStat
 
addScaled(double, ClusStatistic) - Method in class si.ijs.kt.clus.statistic.RegressionStatBinaryNomiss
 
addSection(INIFileSection) - Method in class si.ijs.kt.clus.util.jeans.io.ini.INIFileSectionGroup
 
addSummary(ClusRun) - Method in class si.ijs.kt.clus.main.ClusSummary
 
addTargetAttributesForEachModel() - Method in class si.ijs.kt.clus.model.processor.PredictionWriter
 
addTest(int, int, NodeTest) - Method in class si.ijs.kt.clus.ext.optxval.SoftNumericTest
 
addTest(NodeTest) - Method in class si.ijs.kt.clus.algo.rules.ClusRule
 
addTimes(int) - Static method in class si.ijs.kt.clus.main.ClusStat
 
addTo(ArrayList<DataTuple>) - Method in class si.ijs.kt.clus.data.rows.RowData
 
addToHierarchy(ClassHierarchy) - Method in class si.ijs.kt.clus.ext.hierarchical.ClassesTuple
 
addToken(String, MStreamTokenizer) - Method in class si.ijs.kt.clus.util.jeans.io.ini.INIFileArray
 
addToOther(OOBSelection) - Method in class si.ijs.kt.clus.selection.OOBSelection
 
addToPredictionTime(long, int) - Method in class si.ijs.kt.clus.main.ClusModelInfoList
 
addToRoot(ClusNode) - Method in class si.ijs.kt.clus.data.cols.ColTarget
 
addToStack(DataTuple, double) - Method in class si.ijs.kt.clus.algo.kNN.methods.NNStack
Add new DataTuple tuple with distance dist to stack (if and only if the distance is small enough regarding to tuples already on stack.
addToThis(OOBSelection) - Method in class si.ijs.kt.clus.selection.OOBSelection
 
addToTotal(long, int) - Static method in class si.ijs.kt.clus.main.ClusStat
 
addTransitiveClosureOfMustLinks(ArrayList<DataTuple>[]) - Method in class si.ijs.kt.clus.ext.ilevelc.DerivedConstraintsComputer
 
addValue(double) - Method in class si.ijs.kt.clus.util.jeans.io.ini.INIFileArray
 
addValue(int) - Method in class si.ijs.kt.clus.util.jeans.io.ini.INIFileArray
 
addValue(String) - Method in class si.ijs.kt.clus.util.jeans.io.ini.INIFileArray
 
addVisitorType() - Static method in class si.ijs.kt.clus.util.jeans.util.Visitable
 
afterInduce(ClusStatManager) - Method in class si.ijs.kt.clus.algo.tdidt.ClusNode
 
aggregate(double[]) - Method in interface si.ijs.kt.clus.ext.semisupervised.confidence.aggregation.Aggregation
Class for aggregating per-target reliability scores into a single score
aggregate(double[]) - Method in class si.ijs.kt.clus.ext.semisupervised.confidence.aggregation.Average
 
aggregate(double[]) - Method in class si.ijs.kt.clus.ext.semisupervised.confidence.aggregation.AverageHMC
 
aggregate(double[]) - Method in class si.ijs.kt.clus.ext.semisupervised.confidence.aggregation.Maximum
 
aggregate(double[]) - Method in class si.ijs.kt.clus.ext.semisupervised.confidence.aggregation.Minimum
 
Aggregation - Interface in si.ijs.kt.clus.ext.semisupervised.confidence.aggregation
 
Airbag - Enum constant in enum class si.ijs.kt.clus.main.settings.section.SettingsSSL.SSLStoppingCriteria
(Leistner et al., 2009), based on Out of Bag Error estimate of Random Forest (applicable only if the base method for the Self Training is Random Forest)
ALG_KD - Static variable in class si.ijs.kt.clus.algo.kNN.methods.SearchAlgorithm
 
ALG_PA - Static variable in class si.ijs.kt.clus.algo.kNN.methods.SearchAlgorithm
 
ALG_VP - Static variable in class si.ijs.kt.clus.algo.kNN.methods.SearchAlgorithm
 
All - Enum constant in enum class si.ijs.kt.clus.data.type.ClusAttrType.AttributeUseType
 
All - Enum constant in enum class si.ijs.kt.clus.main.settings.section.SettingsMLC.MultiLabelMeasures
 
allAccurate(RegressionStat) - Method in class si.ijs.kt.clus.pruning.M5PrunerMulti
 
allBetterThanTree(ClusNode, RegressionStat, int) - Method in class si.ijs.kt.clus.pruning.M5PrunerMulti
 
AllData - Enum constant in enum class si.ijs.kt.clus.main.settings.section.SettingsSSL.SSLOOBErrorCalculation
calculate OOB error on all examples in the training set, i.e., unlabeled examples added to the training set are also considered
allFields(Class<?>) - Method in class si.ijs.kt.clus.util.cloner.Cloner
reflection utils, override this to choose which fields to clone
allInvalidLeaves() - Method in class si.ijs.kt.clus.algo.tdidt.ClusNode
 
AllNodes - Enum constant in enum class si.ijs.kt.clus.main.settings.section.SettingsOutput.ConvertRules
 
allOK() - Method in class si.ijs.kt.clus.util.jeans.util.cmdline.CMDLineArgs
 
allowPartialTree() - Method in class si.ijs.kt.clus.model.io.ClusTreeReader
 
allParentsOk(ClassTerm, boolean[]) - Method in class si.ijs.kt.clus.addon.hmc.HMCAverageSingleClass.HMCAverageNodeWiseModels
 
allParentsOk(ClassTerm, boolean[]) - Method in class si.ijs.kt.clus.ext.hierarchical.HierNodeWeights
 
allSameLeaves() - Method in class si.ijs.kt.clus.algo.tdidt.ClusNode
 
AllTargets - Class in si.ijs.kt.clus.addon.sit.searchAlgorithm
 
AllTargets() - Constructor for class si.ijs.kt.clus.addon.sit.searchAlgorithm.AllTargets
 
ALPHA - Static variable in class si.ijs.kt.clus.main.settings.section.SettingsTree
 
ALPHA - Static variable in class si.ijs.kt.clus.util.jeans.util.MSStringTokenizer
 
Always - Enum constant in enum class si.ijs.kt.clus.main.settings.section.SettingsRules.RuleAddingMethod
Always adds a rule to the rule set
AmandaRule - Class in si.ijs.kt.clus.addon.hmc.ClusAmandaRules
 
AmandaRule(ClusStatManager) - Constructor for class si.ijs.kt.clus.addon.hmc.ClusAmandaRules.AmandaRule
 
AminoKimura - Enum constant in enum class si.ijs.kt.clus.main.settings.section.SettingsPhylogeny.PhylogenyDistanceMeasure
 
amountAttribs() - Method in class si.ijs.kt.clus.algo.kNN.distance.valentin.VectorDistance
 
AND - Enum constant in enum class si.ijs.kt.clus.main.settings.section.SettingsHMTR.HierarchyAggregationsHMTR
 
Any - Enum constant in enum class si.ijs.kt.clus.main.settings.section.SettingsPhylogeny.PhylogenySequence
 
appendToFile(ArrayList, ClusRun) - Method in class si.ijs.kt.clus.ext.beamsearch.ClusBeamSimilarityOutput
 
apply(NodeTest, int) - Method in class si.ijs.kt.clus.data.rows.RowData
 
applyAllAlternativeTests(NodeTest, NodeTest[], NodeTest[], int) - Method in class si.ijs.kt.clus.data.rows.RowData
 
applyConstraint(ClusRuleConstraintInduceTest, int) - Method in class si.ijs.kt.clus.data.rows.RowData
 
applyModelProcessor(DataTuple, ClusModelProcessor) - Method in class si.ijs.kt.clus.algo.rules.ClusRuleSet
 
applyModelProcessor(DataTuple, ClusModelProcessor) - Method in class si.ijs.kt.clus.algo.tdidt.ClusNode
 
applyModelProcessors(DataTuple, MyArray) - Method in class si.ijs.kt.clus.addon.hmc.HMCAverageSingleClass.HMCAverageTreeModel
 
applyModelProcessors(DataTuple, MyArray) - Method in class si.ijs.kt.clus.algo.kNN.KnnModel
 
applyModelProcessors(DataTuple, MyArray) - Method in class si.ijs.kt.clus.algo.rules.ClusRule
 
applyModelProcessors(DataTuple, MyArray) - Method in class si.ijs.kt.clus.algo.rules.ClusRuleSet
 
applyModelProcessors(DataTuple, MyArray) - Method in class si.ijs.kt.clus.algo.tdidt.ClusNode
 
applyModelProcessors(DataTuple, MyArray) - Method in class si.ijs.kt.clus.ext.ensemble.ClusForest
 
applyModelProcessors(DataTuple, MyArray) - Method in class si.ijs.kt.clus.ext.featureRanking.relief.ReliefModel
 
applyModelProcessors(DataTuple, MyArray) - Method in class si.ijs.kt.clus.ext.optiontree.ClusOptionNode
 
applyModelProcessors(DataTuple, MyArray) - Method in class si.ijs.kt.clus.ext.optiontree.ClusSplitNode
 
applyModelProcessors(DataTuple, MyArray) - Method in interface si.ijs.kt.clus.model.ClusModel
 
applySoft(SoftTest, int) - Method in class si.ijs.kt.clus.data.rows.RowData
 
applySoft2(SoftTest, int) - Method in class si.ijs.kt.clus.data.rows.RowData
 
applyWeighted(NodeTest, int) - Method in class si.ijs.kt.clus.data.rows.RowData
 
areEqual(TimeSeries, TimeSeries) - Static method in class si.ijs.kt.clus.ext.timeseries.TimeSeries
Checks the equality of the two, possibly null time series.
ARFFFile - Class in si.ijs.kt.clus.data.io
 
ARFFFile(ClusReader) - Constructor for class si.ijs.kt.clus.data.io.ARFFFile
 
arrayclone(double[]) - Static method in class si.ijs.kt.clus.util.jeans.util.sort.DoubleIndexSorter
 
ArrayOfArraysIterator<T> - Class in si.ijs.kt.clus.algo.kNN.methods.bfMethod
 
ArrayOfArraysIterator(T[][]) - Constructor for class si.ijs.kt.clus.algo.kNN.methods.bfMethod.ArrayOfArraysIterator
 
arrayToString(double[]) - Static method in class si.ijs.kt.clus.ext.semisupervised.Helper
Return the values of an array in a comma separated string
arrayToString(double[], String) - Static method in class si.ijs.kt.clus.ext.semisupervised.Helper
Return the values of an array in a string separated sep
arrayToString(String[], String) - Static method in class si.ijs.kt.clus.ext.semisupervised.Helper
Return the values of an array in a string separated sep
arrayToString(IndiceValuePair[], String) - Static method in class si.ijs.kt.clus.ext.semisupervised.Helper
Return the values of an array in a string separated sep
assignAllInstances(ClusNode) - Method in class si.ijs.kt.clus.ext.ilevelc.ILevelCInduce
 
assignAllInstances(ClusNode, int[]) - Method in class si.ijs.kt.clus.ext.ilevelc.ILevelCInduce
 
assignDataToClusters(int[]) - Method in class si.ijs.kt.clus.ext.ilevelc.COPKMeans
 
assignInstances(RowData, int[]) - Method in class si.ijs.kt.clus.ext.ilevelc.ILevelCStatistic
 
assignLabels(ILevelCHeurStat, ILevelCHeurStat, ClusNode, int, int) - Method in class si.ijs.kt.clus.ext.ilevelc.ILevelCInduce
 
assignPointsToComponents(DisjointSetForest) - Method in class si.ijs.kt.clus.ext.ilevelc.DerivedConstraintsComputer
 
assureIsFlatNearestNeighbours(HashMap<Integer, HashMap<Integer, NearestNeighbour[][]>>) - Static method in class si.ijs.kt.clus.ext.featureRanking.relief.nearestNeighbour.SaveLoadNeighbours
Used outside Relief, when we only need the nearest neighbours of each instance and targets do not have any influence.
atBottomLevel() - Method in class si.ijs.kt.clus.ext.hierarchical.ClassTerm
 
atBottomLevel() - Method in class si.ijs.kt.clus.ext.optiontree.MyNode
 
atBottomLevel() - Method in interface si.ijs.kt.clus.ext.optiontree.Node
 
atBottomLevel() - Method in class si.ijs.kt.clus.util.jeans.tree.BinaryNode
 
atBottomLevel() - Method in class si.ijs.kt.clus.util.jeans.tree.MyNode
 
atBottomLevel() - Method in interface si.ijs.kt.clus.util.jeans.tree.Node
 
atBottomLevel() - Method in class si.ijs.kt.clus.util.jeans.tree.SimpleNode
 
atBottomLevel() - Method in class si.ijs.kt.clus.util.jeans.tree.TreeIterator
 
atBottomLevel() - Method in class si.ijs.kt.clus.util.jeans.tree.VisitableNode
 
atRealBottomLevel() - Method in class si.ijs.kt.clus.util.jeans.tree.BinaryNode
 
attach(ClusNode) - Method in class si.ijs.kt.clus.data.ClusData
 
attach(ClusNode) - Method in class si.ijs.kt.clus.data.rows.RowData
 
attachModel(HashMap) - Method in class si.ijs.kt.clus.addon.hmc.HMCAverageSingleClass.HMCAverageTreeModel
 
attachModel(HashMap) - Method in class si.ijs.kt.clus.algo.kNN.KnnModel
 
attachModel(HashMap) - Method in class si.ijs.kt.clus.algo.rules.ClusRule
 
attachModel(HashMap) - Method in class si.ijs.kt.clus.algo.rules.ClusRuleSet
 
attachModel(HashMap) - Method in class si.ijs.kt.clus.algo.tdidt.ClusNode
Code to attach another dataset to the tree
attachModel(HashMap) - Method in class si.ijs.kt.clus.ext.ensemble.ClusForest
 
attachModel(HashMap) - Method in class si.ijs.kt.clus.ext.featureRanking.relief.ReliefModel
 
attachModel(HashMap) - Method in class si.ijs.kt.clus.ext.optiontree.ClusOptionNode
 
attachModel(HashMap) - Method in class si.ijs.kt.clus.ext.optiontree.ClusSplitNode
 
attachModel(HashMap) - Method in interface si.ijs.kt.clus.model.ClusModel
 
attachModel(HashMap) - Method in class si.ijs.kt.clus.model.test.NodeTest
 
attachModel(ClusModel) - Method in class si.ijs.kt.clus.data.ClusSchema
 
attachModels(ClusSchema, ClusRun) - Method in class si.ijs.kt.clus.Clus
 
atTopLevel() - Method in class si.ijs.kt.clus.ext.hierarchical.ClassTerm
 
atTopLevel() - Method in class si.ijs.kt.clus.ext.optiontree.MyNode
 
atTopLevel() - Method in interface si.ijs.kt.clus.ext.optiontree.Node
 
atTopLevel() - Method in class si.ijs.kt.clus.util.jeans.tree.BinaryNode
 
atTopLevel() - Method in class si.ijs.kt.clus.util.jeans.tree.MyNode
 
atTopLevel() - Method in interface si.ijs.kt.clus.util.jeans.tree.Node
 
atTopLevel() - Method in class si.ijs.kt.clus.util.jeans.tree.SimpleNode
 
atTopLevel() - Method in class si.ijs.kt.clus.util.jeans.tree.TreeIterator
 
atTopLevel() - Method in class si.ijs.kt.clus.util.jeans.tree.VisitableNode
 
attributes - Variable in class si.ijs.kt.clus.heuristic.EncodingCost
 
AttributeStatistic - Class in si.ijs.kt.clus.algo.kNN.distance.valentin
This class represents an object containing useful statistics for an attribute of certain data.
AttributeStatistic() - Constructor for class si.ijs.kt.clus.algo.kNN.distance.valentin.AttributeStatistic
 
attributesWithNonZeroWeight(ClusAttrType[], AttributeWeighting) - Static method in class si.ijs.kt.clus.distance.ClusDistance
 
attributeToLinTermPrediction(Settings, DataTuple, int, int, int, boolean) - Static method in class si.ijs.kt.clus.algo.rules.ClusRuleLinearTerm
Returns the prediction for a linear term given a descriptive attribute value.
AttributeWeighting - Class in si.ijs.kt.clus.algo.kNN.distance.attributeWeighting
 
AttributeWeighting() - Constructor for class si.ijs.kt.clus.algo.kNN.distance.attributeWeighting.AttributeWeighting
 
AutomaticOOB - Enum constant in enum class si.ijs.kt.clus.main.settings.section.SettingsSSL.SSLUnlabeledCriteria
AutomaticOOB - the optimal threshold will be selected on the basis of OOB error of the labeled examples
AutomaticOOBInitial - Enum constant in enum class si.ijs.kt.clus.main.settings.section.SettingsSSL.SSLUnlabeledCriteria
AutomaticOOBInitial - the threshold will be selected according to AutomaticOOB at initial iteration, this threshold is in next iterations
average(double[]) - Static method in class si.ijs.kt.clus.ext.semisupervised.Helper
Calculates average of an array of values
average(double[]) - Static method in class si.ijs.kt.clus.util.ClusUtil
 
Average - Class in si.ijs.kt.clus.ext.semisupervised.confidence.aggregation
Averages per-target reliability scores
Average - Enum constant in enum class si.ijs.kt.clus.main.settings.section.SettingsSSL.SSLAggregation
 
Average() - Constructor for class si.ijs.kt.clus.ext.semisupervised.confidence.aggregation.Average
 
averageAUPRC - Enum constant in enum class si.ijs.kt.clus.error.mlcForHmlc.MLROCAndPRCurve.CurveType
 
averageAUPRC - Static variable in class si.ijs.kt.clus.error.mlc.MLROCAndPRCurve
 
AverageAUPRC - Enum constant in enum class si.ijs.kt.clus.main.settings.section.SettingsHMLC.HierarchyMeasures
 
AverageAUPRC - Enum constant in enum class si.ijs.kt.clus.main.settings.section.SettingsMLC.MultiLabelMeasures
 
averageAUROC - Enum constant in enum class si.ijs.kt.clus.error.mlcForHmlc.MLROCAndPRCurve.CurveType
 
averageAUROC - Static variable in class si.ijs.kt.clus.error.mlc.MLROCAndPRCurve
 
AverageAUROC - Enum constant in enum class si.ijs.kt.clus.main.settings.section.SettingsHMLC.HierarchyMeasures
 
AverageAUROC - Enum constant in enum class si.ijs.kt.clus.main.settings.section.SettingsMLC.MultiLabelMeasures
 
AverageHMC - Class in si.ijs.kt.clus.ext.semisupervised.confidence.aggregation
Averages per-target scores, but ignores zeros.
AverageHMC() - Constructor for class si.ijs.kt.clus.ext.semisupervised.confidence.aggregation.AverageHMC
 
averageIgnoreZeros(double[]) - Static method in class si.ijs.kt.clus.ext.semisupervised.Helper
 
AverageIgnoreZeros - Enum constant in enum class si.ijs.kt.clus.main.settings.section.SettingsSSL.SSLAggregation
 
AveragePrecision - Class in si.ijs.kt.clus.error.mlc
 
AveragePrecision - Class in si.ijs.kt.clus.error.mlcForHmlc
 
AveragePrecision - Enum constant in enum class si.ijs.kt.clus.main.settings.section.SettingsMLC.MultiLabelMeasures
 
AveragePrecision() - Constructor for class si.ijs.kt.clus.error.mlcForHmlc.AveragePrecision
 
AveragePrecision(ClusErrorList, NominalAttrType[]) - Constructor for class si.ijs.kt.clus.error.mlc.AveragePrecision
 
Avg - Enum constant in enum class si.ijs.kt.clus.main.settings.section.SettingsRules.OptimizationGDMTCombineGradient
GD optimization, combining of targets - combine by taking average.
AVG - Enum constant in enum class si.ijs.kt.clus.main.settings.section.SettingsHMTR.HierarchyAggregationsHMTR
 
AvgDistancesError - Class in si.ijs.kt.clus.error
 
AvgDistancesError(ClusErrorList, ClusDistance) - Constructor for class si.ijs.kt.clus.error.AvgDistancesError
 
AvgDistancesError(ClusErrorList, ClusDistance, String) - Constructor for class si.ijs.kt.clus.error.AvgDistancesError
 
AvgLearner - Class in si.ijs.kt.clus.addon.sit.mtLearner
 
AvgLearner() - Constructor for class si.ijs.kt.clus.addon.sit.mtLearner.AvgLearner
 

B

Bagging - Enum constant in enum class si.ijs.kt.clus.main.settings.section.SettingsEnsemble.EnsembleMethod
 
baggingRun(ClusInductionAlgorithmType) - Method in class si.ijs.kt.clus.Clus
 
BagSelection - Class in si.ijs.kt.clus.selection
 
BagSelection(int) - Constructor for class si.ijs.kt.clus.selection.BagSelection
Creates a new bag selection of size nbrows from a total of nbrows instances.
BagSelection(int, int, ClusRandomNonstatic) - Constructor for class si.ijs.kt.clus.selection.BagSelection
Create a new bag of size nbselected from a total of nbrows instances.
BagSelectionSemiSupervised - Class in si.ijs.kt.clus.selection
 
BagSelectionSemiSupervised(int, int, int, ClusRandomNonstatic) - Constructor for class si.ijs.kt.clus.selection.BagSelectionSemiSupervised
Creates a new bag selection from dataset consisting of labeled and unlabeled examples.
BagSubspaces - Enum constant in enum class si.ijs.kt.clus.main.settings.section.SettingsEnsemble.EnsembleMethod
 
BANDWIDTH - Static variable in class si.ijs.kt.clus.main.settings.section.SettingsTree
 
BasicDistance - Class in si.ijs.kt.clus.algo.kNN.distance.valentin
This class represents the distance between values of a certain attribute type.
BasicDistance(Settings) - Constructor for class si.ijs.kt.clus.algo.kNN.distance.valentin.BasicDistance
 
BasicExampleCollector - Class in si.ijs.kt.clus.algo.tdidt.processor
 
BasicExampleCollector() - Constructor for class si.ijs.kt.clus.algo.tdidt.processor.BasicExampleCollector
 
BEAM_SEARCH - Enum constant in enum class si.ijs.kt.clus.main.ClusStatManager.Mode
 
BEAM_SIMILARITY - Static variable in class si.ijs.kt.clus.main.settings.section.SettingsBeamSearch
 
BEAM_SYNT_DIST_CONSTR - Static variable in class si.ijs.kt.clus.main.settings.section.SettingsBeamSearch
 
BEAM_WIDTH - Static variable in class si.ijs.kt.clus.main.settings.section.SettingsBeamSearch
Section: Beam search *
BeamRuleDefSet - Enum constant in enum class si.ijs.kt.clus.main.settings.section.SettingsRules.CoveringMethod
Evaluates rules in the context of complete rule set, builds default rule first, checks all rules in the beam: unordered rules FIXME Obsolete - should be deleted!
beamSearch(ClusRun) - Method in class si.ijs.kt.clus.ext.beamsearch.ClusBeamSearch
 
BestFirst - Enum constant in enum class si.ijs.kt.clus.main.settings.section.SettingsTree.InductionOrder
 
BestFirst_getDescriptiveAttributes - Enum constant in enum class si.ijs.kt.clus.ext.ensemble.ClusEnsembleInduce.ParallelTrap
 
BestFirstInduce - Class in si.ijs.kt.clus.ext.bestfirst
 
BestFirstInduce(ClusInductionAlgorithm) - Constructor for class si.ijs.kt.clus.ext.bestfirst.BestFirstInduce
 
BestFirstInduce(ClusInductionAlgorithm, NominalSplit) - Constructor for class si.ijs.kt.clus.ext.bestfirst.BestFirstInduce
 
BestFirstInduce(ClusSchema, Settings) - Constructor for class si.ijs.kt.clus.ext.bestfirst.BestFirstInduce
 
besttests - Variable in class si.ijs.kt.clus.ext.beamsearch.ClusBeamAttrSelector
 
Binary - Enum constant in enum class si.ijs.kt.clus.main.settings.section.SettingsTree.SpatialMatrixType
 
BINARY_NAMES - Static variable in class si.ijs.kt.clus.data.type.primitive.NominalAttrType
 
BinaryNode - Class in si.ijs.kt.clus.util.jeans.tree
 
BinaryNode() - Constructor for class si.ijs.kt.clus.util.jeans.tree.BinaryNode
 
BinaryPredictionList - Class in si.ijs.kt.clus.error
This class could be used in any kind of classification setting (e.g., hierarchical multilabel) and basically stores the statistics, which enables as to compute the number of TP, TN, FP and FN (T - true, F - false, P - positives, and N - negatives) for any given threshold.
BinaryPredictionList() - Constructor for class si.ijs.kt.clus.error.BinaryPredictionList
 
binarySearch(int) - Method in class si.ijs.kt.clus.util.jeans.util.array.MyIntArray
 
BitList - Class in si.ijs.kt.clus.util.jeans.list
 
BitList() - Constructor for class si.ijs.kt.clus.util.jeans.list.BitList
 
BitList(int) - Constructor for class si.ijs.kt.clus.util.jeans.list.BitList
 
BitMapSelection - Class in si.ijs.kt.clus.selection
 
BitMapSelection(int) - Constructor for class si.ijs.kt.clus.selection.BitMapSelection
 
BitVectorStat - Class in si.ijs.kt.clus.statistic
 
BitVectorStat(Settings) - Constructor for class si.ijs.kt.clus.statistic.BitVectorStat
 
BitwiseInt - Enum constant in enum class si.ijs.kt.clus.data.type.ClusAttrType.ValueType
 
BitwiseNominalAttrType - Class in si.ijs.kt.clus.data.type
 
BitwiseNominalAttrType(String) - Constructor for class si.ijs.kt.clus.data.type.BitwiseNominalAttrType
 
BitwiseNominalAttrType(String, int) - Constructor for class si.ijs.kt.clus.data.type.BitwiseNominalAttrType
 
BitwiseNominalAttrType(String, String) - Constructor for class si.ijs.kt.clus.data.type.BitwiseNominalAttrType
 
BitwiseNominalAttrType(String, String[]) - Constructor for class si.ijs.kt.clus.data.type.BitwiseNominalAttrType
 
blackBoxTestInterpolate() - Method in class si.ijs.kt.clus.util.jeans.math.MathUtil
 
blackBoxTestInterpolateX - Variable in class si.ijs.kt.clus.util.jeans.math.MathUtil
 
blackBoxTestInterpolateY - Variable in class si.ijs.kt.clus.util.jeans.math.MathUtil
 
Boosting - Enum constant in enum class si.ijs.kt.clus.main.settings.section.SettingsEnsemble.EnsembleMethod
 
BOTH_MISSING_DIST - Static variable in class si.ijs.kt.clus.ext.featureRanking.relief.ClusReliefFeatureRanking
distance in the case of missing values
BottomLevelIterator - Class in si.ijs.kt.clus.util.jeans.tree
 
BottomLevelIterator(TreeIterator) - Constructor for class si.ijs.kt.clus.util.jeans.tree.BottomLevelIterator
 
BottomUpPruningVSB - Class in si.ijs.kt.clus.pruning
 
BottomUpPruningVSB(ClusErrorList, RowData) - Constructor for class si.ijs.kt.clus.pruning.BottomUpPruningVSB
 
bound - Variable in class si.ijs.kt.clus.ext.beamsearch.ClusBeamSizeConstraintInfo
 
Brute - Enum constant in enum class si.ijs.kt.clus.main.settings.section.SettingsRules.GDExternalMethodValues
 
BruteForce - Class in si.ijs.kt.clus.algo.kNN.methods.bfMethod
 
BruteForce - Enum constant in enum class si.ijs.kt.clus.main.settings.section.SettingsKNN.SearchMethod
 
BruteForce(ClusRun, SearchDistance) - Constructor for class si.ijs.kt.clus.algo.kNN.methods.bfMethod.BruteForce
 
build(int) - Method in class si.ijs.kt.clus.algo.kNN.methods.bfMethod.BruteForce
 
build(int) - Method in class si.ijs.kt.clus.algo.kNN.methods.bfMethod.OracleBruteForce
 
build(int) - Method in class si.ijs.kt.clus.algo.kNN.methods.kdTree.KDNode
Recursive split space on two subspaces along selected axis.
build(int) - Method in class si.ijs.kt.clus.algo.kNN.methods.kdTree.KDTree
Builds tree.
build(int) - Method in class si.ijs.kt.clus.algo.kNN.methods.SearchAlgorithm
Building search structure on known samples.
build(int) - Method in class si.ijs.kt.clus.algo.kNN.methods.vpTree.VPTree
 
build(int, boolean) - Method in class si.ijs.kt.clus.algo.kNN.methods.bfMethod.OracleBruteForce
 
build(MStreamTokenizer) - Method in class si.ijs.kt.clus.util.jeans.io.ini.INIFileArray
 
build(MStreamTokenizer) - Method in class si.ijs.kt.clus.util.jeans.io.ini.INIFileEntry
 
build(MStreamTokenizer) - Method in class si.ijs.kt.clus.util.jeans.io.ini.INIFileNominal
 
build(MStreamTokenizer) - Method in class si.ijs.kt.clus.util.jeans.io.ini.INIFileNominalOrDoubleOrVector
 
build(MStreamTokenizer) - Method in class si.ijs.kt.clus.util.jeans.io.ini.INIFileNominalOrIntOrVector
 
buildAttributeHash() - Method in class si.ijs.kt.clus.data.ClusSchema
 
buildForMissingTargetImputation(int, int[], SettingsKNN) - Method in class si.ijs.kt.clus.algo.kNN.methods.bfMethod.BruteForce
 
buildForMissingTargetImputation(int, int[], SettingsKNN) - Method in class si.ijs.kt.clus.algo.kNN.methods.bfMethod.OracleBruteForce
Keep those of the training examples with missing values that are in the chosen training instances and build the model.
buildForMissingTargetImputation(int, int[], SettingsKNN) - Method in class si.ijs.kt.clus.algo.kNN.methods.kdTree.KDTree
 
buildForMissingTargetImputation(int, int[], SettingsKNN) - Method in class si.ijs.kt.clus.algo.kNN.methods.SearchAlgorithm
 
buildForMissingTargetImputation(int, int[], SettingsKNN) - Method in class si.ijs.kt.clus.algo.kNN.methods.vpTree.VPTree
 
buildSettingsTables(String) - Method in class si.ijs.kt.clus.util.tools.manual.ManualBuilder
 

C

C1E_16 - Static variable in class si.ijs.kt.clus.util.jeans.math.MathUtil
 
C1E_6 - Static variable in class si.ijs.kt.clus.util.jeans.math.MathUtil
 
C1E_9 - Static variable in class si.ijs.kt.clus.util.jeans.math.MathUtil
 
C45 - Enum constant in enum class si.ijs.kt.clus.main.settings.section.SettingsTree.PruningMethod
 
C45Pruner - Class in si.ijs.kt.clus.pruning
 
C45Pruner() - Constructor for class si.ijs.kt.clus.pruning.C45Pruner
 
calcAccuracy(int) - Method in class si.ijs.kt.clus.error.ContingencyTable
 
calcAverageErrors(RowData, ClusModel, ClusStatManager) - Method in class si.ijs.kt.clus.ext.featureRanking.ClusFeatureRanking
Calculates values of all error measures.
calcBeamSimilarity(ArrayList, RowData, boolean) - Static method in class si.ijs.kt.clus.ext.beamsearch.ClusBeamModelDistance
Dragi Calculates BeamSimilarity for a given Data Set
calcBivariateLee(Integer[]) - Method in class si.ijs.kt.clus.statistic.ClassificationStat
 
calcBivariateLee(Integer[]) - Method in class si.ijs.kt.clus.statistic.ClusStatistic
 
calcBivariateLee(Integer[]) - Method in class si.ijs.kt.clus.statistic.RegressionStat
 
calcCItotal(Integer[]) - Method in class si.ijs.kt.clus.statistic.ClassificationStat
 
calcCItotal(Integer[]) - Method in class si.ijs.kt.clus.statistic.ClusStatistic
 
calcCItotal(Integer[]) - Method in class si.ijs.kt.clus.statistic.RegressionStat
 
calcCItotalD(Integer[]) - Method in class si.ijs.kt.clus.statistic.ClassificationStat
 
calcCItotalD(Integer[]) - Method in class si.ijs.kt.clus.statistic.ClusStatistic
 
calcCItotalD(Integer[]) - Method in class si.ijs.kt.clus.statistic.RegressionStat
 
calcCIwithNeighbours(Integer[]) - Method in class si.ijs.kt.clus.statistic.ClassificationStat
 
calcCIwithNeighbours(Integer[]) - Method in class si.ijs.kt.clus.statistic.ClusStatistic
 
calcCIwithNeighbours(Integer[]) - Method in class si.ijs.kt.clus.statistic.RegressionStat
 
calcCramerV() - Method in class si.ijs.kt.clus.error.NominalCorrelation
 
calcCramerV(int) - Method in class si.ijs.kt.clus.error.ContingencyTable
 
calcCwithNeighbourstotal(Integer[]) - Method in class si.ijs.kt.clus.statistic.ClassificationStat
 
calcCwithNeighbourstotal(Integer[]) - Method in class si.ijs.kt.clus.statistic.ClusStatistic
 
calcCwithNeighbourstotal(Integer[]) - Method in class si.ijs.kt.clus.statistic.RegressionStat
 
calcDefaultAccuracy(int) - Method in class si.ijs.kt.clus.error.ContingencyTable
 
calcDHtotalD(Integer[]) - Method in class si.ijs.kt.clus.statistic.ClusStatistic
 
calcDistance(Object, Object) - Method in class si.ijs.kt.clus.distance.ClusDistance
 
calcDistance(Object, Object) - Method in class si.ijs.kt.clus.distance.complex.TupleDistance
 
calcDistance(Object, Object) - Method in class si.ijs.kt.clus.distance.complex.tuples.MinkowskiDistance
 
calcDistance(Object, Object) - Method in class si.ijs.kt.clus.distance.primitive.nominal.NominalDistance
 
calcDistance(Object, Object) - Method in class si.ijs.kt.clus.distance.primitive.timeseries.TimeSeriesDist
 
calcDistance(DataTuple, DataTuple) - Method in class si.ijs.kt.clus.distance.ClusDistance
 
calcDistance(DataTuple, DataTuple) - Method in class si.ijs.kt.clus.distance.complex.SetDistance
 
calcDistance(DataTuple, DataTuple) - Method in class si.ijs.kt.clus.distance.complex.TupleDistance
 
calcDistance(DataTuple, DataTuple) - Method in class si.ijs.kt.clus.distance.complex.tuples.SSPDMatrix
 
calcDistance(DataTuple, DataTuple) - Method in class si.ijs.kt.clus.distance.hierarchies.HierJaccardDistance
 
calcDistance(DataTuple, DataTuple) - Method in class si.ijs.kt.clus.distance.primitive.ChebyshevDistance
 
calcDistance(DataTuple, DataTuple) - Method in class si.ijs.kt.clus.distance.primitive.EuclideanDistance
Returns the Euclidean distance between given tuples.
calcDistance(DataTuple, DataTuple) - Method in class si.ijs.kt.clus.distance.primitive.ManhattanDistance
 
calcDistance(DataTuple, DataTuple) - Method in class si.ijs.kt.clus.distance.primitive.SearchDistance
A wrapper method that returns distance between two tuples based on given (constructor) distance (ClusDistance).
calcDistance(DataTuple, DataTuple) - Method in class si.ijs.kt.clus.distance.primitive.timeseries.TimeSeriesDist
 
calcDistance(DataTuple, DataTuple) - Method in class si.ijs.kt.clus.ext.structuredTypes.TupleStatistic
 
calcDistance(DataTuple, DataTuple) - Method in class si.ijs.kt.clus.statistic.SumPairwiseDistancesStat
 
calcDistance(ClassesTuple, ClassesTuple) - Method in class si.ijs.kt.clus.statistic.WHTDStatistic
 
calcDistance(ClassTerm, ClassTerm) - Method in interface si.ijs.kt.clus.distance.hierarchies.HierBasicDistance
 
calcDistance(ClassTerm, ClassTerm) - Method in class si.ijs.kt.clus.distance.hierarchies.HierLevelDistance
 
calcDistance(ClassTerm, ClassTerm) - Method in class si.ijs.kt.clus.distance.hierarchies.HierWeightSPath
 
calcDistance(ClassTerm, ClassTerm) - Method in class si.ijs.kt.clus.distance.hierarchies.HierWPenalty
 
calcDistance(Set, Set) - Method in class si.ijs.kt.clus.distance.complex.SetDistance
 
calcDistance(Set, Set) - Method in class si.ijs.kt.clus.distance.complex.sets.EuclideanDistance
 
calcDistance(Set, Set) - Method in class si.ijs.kt.clus.distance.complex.sets.GSMDistance
 
calcDistance(Set, Set) - Method in class si.ijs.kt.clus.distance.complex.sets.GSMDistanceBitVector
 
calcDistance(Set, Set) - Method in class si.ijs.kt.clus.distance.complex.sets.HammingLossDistance
 
calcDistance(Set, Set) - Method in class si.ijs.kt.clus.distance.complex.sets.JaccardDistance
 
calcDistance(Set, Set) - Method in class si.ijs.kt.clus.ext.structuredTypes.SetStatistic
 
calcDistance(Tuple, Tuple) - Method in class si.ijs.kt.clus.distance.complex.TupleDistance
 
calcDistance(Tuple, Tuple) - Method in class si.ijs.kt.clus.distance.complex.tuples.EuclideanDistance
 
calcDistance(Tuple, Tuple) - Method in class si.ijs.kt.clus.distance.complex.tuples.MinkowskiDistance
 
calcDistance(Tuple, Tuple) - Method in class si.ijs.kt.clus.ext.structuredTypes.TupleStatistic
 
calcDistance(TimeSeries, TimeSeries) - Method in class si.ijs.kt.clus.distance.primitive.timeseries.DTWTimeSeriesDist
 
calcDistance(TimeSeries, TimeSeries) - Method in class si.ijs.kt.clus.distance.primitive.timeseries.QDMTimeSeriesDist
 
calcDistance(TimeSeries, TimeSeries) - Method in class si.ijs.kt.clus.distance.primitive.timeseries.TimeSeriesDist
 
calcDistance(TimeSeries, TimeSeries) - Method in class si.ijs.kt.clus.distance.primitive.timeseries.TSCTimeSeriesDist
 
calcDistance(TimeSeries, TimeSeries) - Method in class si.ijs.kt.clus.ext.timeseries.TimeSeriesStat
 
calcDistance(TimeSeries, TimeSeries, int) - Method in class si.ijs.kt.clus.distance.primitive.timeseries.DTWTimeSeriesDist
 
calcDistanceOnAttr(DataTuple, DataTuple, ClusAttrType) - Method in class si.ijs.kt.clus.distance.primitive.SearchDistance
Calculates distance between tuples based only on a a given attribute.
calcDistanceToCentroid(DataTuple) - Method in class si.ijs.kt.clus.statistic.SumPairwiseDistancesStat
 
calcDistanceToCentroid(DataTuple, ClusStatistic) - Method in class si.ijs.kt.clus.distance.ClusDistance
 
calcDistanceToCentroid(DataTuple, ClusStatistic) - Method in class si.ijs.kt.clus.distance.complex.SetDistance
 
calcDistanceToCentroid(DataTuple, ClusStatistic) - Method in class si.ijs.kt.clus.distance.complex.TupleDistance
 
calcDistanceToCentroid(DataTuple, ClusStatistic) - Method in class si.ijs.kt.clus.distance.hierarchies.HierJaccardDistance
 
calcDistanceToCentroid(DataTuple, ClusStatistic) - Method in class si.ijs.kt.clus.distance.primitive.timeseries.TimeSeriesDist
 
calcEquvalentGDistance(Integer[]) - Method in class si.ijs.kt.clus.statistic.ClassificationStat
 
calcEquvalentGDistance(Integer[]) - Method in class si.ijs.kt.clus.statistic.ClusStatistic
 
calcEquvalentGDistance(Integer[]) - Method in class si.ijs.kt.clus.statistic.RegressionStat
 
calcEquvalentGDistance(Integer[]) - Method in class si.ijs.kt.clus.statistic.WHTDStatistic
 
calcEquvalentGtotal(Integer[]) - Method in class si.ijs.kt.clus.statistic.ClassificationStat
 
calcEquvalentGtotal(Integer[]) - Method in class si.ijs.kt.clus.statistic.ClusStatistic
 
calcEquvalentGtotal(Integer[]) - Method in class si.ijs.kt.clus.statistic.RegressionStat
 
calcEquvalentGtotal(Integer[]) - Method in class si.ijs.kt.clus.statistic.WHTDStatistic
 
calcEquvalentIDistance(Integer[]) - Method in class si.ijs.kt.clus.statistic.ClassificationStat
 
calcEquvalentIDistance(Integer[]) - Method in class si.ijs.kt.clus.statistic.ClusStatistic
 
calcEquvalentIDistance(Integer[]) - Method in class si.ijs.kt.clus.statistic.RegressionStat
 
calcEquvalentIDistance(Integer[]) - Method in class si.ijs.kt.clus.statistic.WHTDStatistic
 
calcEquvalentItotal(Integer[]) - Method in class si.ijs.kt.clus.statistic.ClassificationStat
 
calcEquvalentItotal(Integer[]) - Method in class si.ijs.kt.clus.statistic.ClusStatistic
 
calcEquvalentItotal(Integer[]) - Method in class si.ijs.kt.clus.statistic.RegressionStat
 
calcEquvalentItotal(Integer[]) - Method in class si.ijs.kt.clus.statistic.WHTDStatistic
 
calcEquvalentIwithNeighbourstotal() - Method in class si.ijs.kt.clus.statistic.RegressionStat
 
calcEquvalentIwithNeighbourstotal(Integer[]) - Method in class si.ijs.kt.clus.statistic.ClassificationStat
 
calcEquvalentIwithNeighbourstotal(Integer[]) - Method in class si.ijs.kt.clus.statistic.ClusStatistic
 
calcEquvalentPDistance(Integer[]) - Method in class si.ijs.kt.clus.statistic.ClusStatistic
 
calcEquvalentPDistance(Integer[]) - Method in class si.ijs.kt.clus.statistic.WHTDStatistic
 
calcError(ClusNode, ClusErrorList) - Method in class si.ijs.kt.clus.data.ClusData
 
calcError(ClusNode, ClusErrorList) - Method in class si.ijs.kt.clus.data.rows.RowData
 
calcError(TupleIterator, int, ClusRun) - Method in class si.ijs.kt.clus.Clus
 
calcError(TupleIterator, int, ClusRun, ClusEnsemblePredictionWriter) - Method in class si.ijs.kt.clus.Clus
Compute either test or train error
calcError(TupleIterator, ClusModel) - Method in class si.ijs.kt.clus.error.common.ClusErrorList
 
calcError(ClusRun, ClusSummary) - Method in class si.ijs.kt.clus.Clus
 
calcError(ClusRun, ClusSummary, ClusEnsemblePredictionWriter) - Method in class si.ijs.kt.clus.Clus
 
calcExtraTrainingSetErrors(ClusRun) - Method in class si.ijs.kt.clus.Clus
 
calcFitness(ArrayList<Double>, ClusRuleSet) - Method in class si.ijs.kt.clus.util.tools.optimization.OptimizationProblem
Fitness function over all targets.
calcFitnessForTarget(ArrayList<Double>, int, ClusRuleSet) - Method in class si.ijs.kt.clus.util.tools.optimization.OptimizationProblem
Fitness function for single target, not for all of them.
calcGetisTotal(Integer[]) - Method in class si.ijs.kt.clus.statistic.ClassificationStat
 
calcGetisTotal(Integer[]) - Method in class si.ijs.kt.clus.statistic.ClusStatistic
 
calcGetisTotal(Integer[]) - Method in class si.ijs.kt.clus.statistic.RegressionStat
 
calcGETIStotal(Integer[]) - Method in class si.ijs.kt.clus.statistic.ClassificationStat
 
calcGETIStotal(Integer[]) - Method in class si.ijs.kt.clus.statistic.ClusStatistic
 
calcGETIStotal(Integer[]) - Method in class si.ijs.kt.clus.statistic.RegressionStat
 
calcGLocalTotal(Integer[]) - Method in class si.ijs.kt.clus.statistic.ClassificationStat
 
calcGLocalTotal(Integer[]) - Method in class si.ijs.kt.clus.statistic.ClusStatistic
 
calcGLocalTotal(Integer[]) - Method in class si.ijs.kt.clus.statistic.RegressionStat
 
calcGtotal(Integer[]) - Method in class si.ijs.kt.clus.statistic.ClassificationStat
 
calcGtotal(Integer[]) - Method in class si.ijs.kt.clus.statistic.ClusStatistic
 
calcGtotal(Integer[]) - Method in class si.ijs.kt.clus.statistic.RegressionStat
 
calcGtotal(Integer[]) - Method in class si.ijs.kt.clus.statistic.WHTDStatistic
 
calcGtotalD(Integer[]) - Method in class si.ijs.kt.clus.statistic.ClassificationStat
 
calcGtotalD(Integer[]) - Method in class si.ijs.kt.clus.statistic.ClusStatistic
 
calcGtotalD(Integer[]) - Method in class si.ijs.kt.clus.statistic.RegressionStat
 
calcGtotalD(Integer[]) - Method in class si.ijs.kt.clus.statistic.WHTDStatistic
 
calcHeuristic(ClusStatistic) - Method in class si.ijs.kt.clus.algo.split.CurrentBestTestAndHeuristic
Heuristics
calcHeuristic(ClusStatistic) - Method in class si.ijs.kt.clus.ext.optiontree.TestAndHeuristic
Heuristics
calcHeuristic(ClusStatistic, ClusStatistic) - Method in class si.ijs.kt.clus.algo.split.CurrentBestTestAndHeuristic
 
calcHeuristic(ClusStatistic, ClusStatistic) - Method in class si.ijs.kt.clus.ext.optiontree.TestAndHeuristic
 
calcHeuristic(ClusStatistic, ClusStatistic[], int) - Method in class si.ijs.kt.clus.algo.split.CurrentBestTestAndHeuristic
 
calcHeuristic(ClusStatistic, ClusStatistic[], int) - Method in class si.ijs.kt.clus.ext.optiontree.TestAndHeuristic
 
calcHeuristic(ClusStatistic, ClusStatistic[], int) - Method in class si.ijs.kt.clus.heuristic.ClusHeuristic
 
calcHeuristic(ClusStatistic, ClusStatistic[], int) - Method in class si.ijs.kt.clus.heuristic.GainHeuristic
 
calcHeuristic(ClusStatistic, ClusStatistic[], int) - Method in class si.ijs.kt.clus.heuristic.GeneticDistanceHeuristicMatrix
 
calcHeuristic(ClusStatistic, ClusStatistic[], int) - Method in class si.ijs.kt.clus.heuristic.GISHeuristic
 
calcHeuristic(ClusStatistic, ClusStatistic[], int) - Method in class si.ijs.kt.clus.heuristic.ReducedErrorHeuristic
 
calcHeuristic(ClusStatistic, ClusStatistic[], int) - Method in class si.ijs.kt.clus.heuristic.VarianceReductionHeuristicEfficient
 
calcHeuristic(ClusStatistic, ClusStatistic, ClusStatistic) - Method in class si.ijs.kt.clus.ext.beamsearch.ClusBeamHeuristicError
 
calcHeuristic(ClusStatistic, ClusStatistic, ClusStatistic) - Method in class si.ijs.kt.clus.ext.beamsearch.ClusBeamHeuristicMEstimate
 
calcHeuristic(ClusStatistic, ClusStatistic, ClusStatistic) - Method in class si.ijs.kt.clus.ext.beamsearch.ClusBeamHeuristicMorishita
 
calcHeuristic(ClusStatistic, ClusStatistic, ClusStatistic) - Method in class si.ijs.kt.clus.ext.beamsearch.ClusBeamHeuristicSS
 
calcHeuristic(ClusStatistic, ClusStatistic, ClusStatistic) - Method in class si.ijs.kt.clus.heuristic.ClusHeuristic
 
calcHeuristic(ClusStatistic, ClusStatistic, ClusStatistic) - Method in class si.ijs.kt.clus.heuristic.ClusHeuristicImpl
 
calcHeuristic(ClusStatistic, ClusStatistic, ClusStatistic) - Method in class si.ijs.kt.clus.heuristic.GainHeuristic
 
calcHeuristic(ClusStatistic, ClusStatistic, ClusStatistic) - Method in class si.ijs.kt.clus.heuristic.GeneticDistanceHeuristicMatrix
 
calcHeuristic(ClusStatistic, ClusStatistic, ClusStatistic) - Method in class si.ijs.kt.clus.heuristic.GISHeuristic
 
calcHeuristic(ClusStatistic, ClusStatistic, ClusStatistic) - Method in class si.ijs.kt.clus.heuristic.hierarchical.ClusRuleHeuristicHierarchical
This heuristic calculates: ( |S|.Var(S) - |Sr|.Var(Sr) ) .
calcHeuristic(ClusStatistic, ClusStatistic, ClusStatistic) - Method in class si.ijs.kt.clus.heuristic.ReducedErrorHeuristic
 
calcHeuristic(ClusStatistic, ClusStatistic, ClusStatistic) - Method in class si.ijs.kt.clus.heuristic.rules.ClusRuleHeuristicDispersionAdt
 
calcHeuristic(ClusStatistic, ClusStatistic, ClusStatistic) - Method in class si.ijs.kt.clus.heuristic.rules.ClusRuleHeuristicDispersionMlt
 
calcHeuristic(ClusStatistic, ClusStatistic, ClusStatistic) - Method in class si.ijs.kt.clus.heuristic.rules.ClusRuleHeuristicError
 
calcHeuristic(ClusStatistic, ClusStatistic, ClusStatistic) - Method in class si.ijs.kt.clus.heuristic.rules.ClusRuleHeuristicMEstimate
 
calcHeuristic(ClusStatistic, ClusStatistic, ClusStatistic) - Method in class si.ijs.kt.clus.heuristic.rules.ClusRuleHeuristicRDispersionAdt
 
calcHeuristic(ClusStatistic, ClusStatistic, ClusStatistic) - Method in class si.ijs.kt.clus.heuristic.rules.ClusRuleHeuristicRDispersionMlt
 
calcHeuristic(ClusStatistic, ClusStatistic, ClusStatistic) - Method in class si.ijs.kt.clus.heuristic.rules.ClusRuleHeuristicSSD
 
calcHeuristic(ClusStatistic, ClusStatistic, ClusStatistic) - Method in class si.ijs.kt.clus.heuristic.VarianceReductionHeuristic
 
calcHeuristic(ClusStatistic, ClusStatistic, ClusStatistic) - Method in class si.ijs.kt.clus.heuristic.VarianceReductionHeuristicCompatibility
 
calcHeuristic(ClusStatistic, ClusStatistic, ClusStatistic) - Method in class si.ijs.kt.clus.heuristic.VarianceReductionHeuristicEfficient
 
calcHeuristic(ClusStatistic, ClusStatistic, ClusStatistic) - Method in class si.ijs.kt.clus.heuristic.VarianceReductionHeuristicInclMissingValues
 
calcHeuristic(ClusStatistic, ClusStatistic, ClusStatistic, double) - Method in class si.ijs.kt.clus.heuristic.ClusHeuristic
This method should be overwritten in the classes of heuristics that are efficient.
calcHeuristic(ClusStatistic, ClusStatistic, ClusStatistic, double) - Method in class si.ijs.kt.clus.heuristic.VarianceReductionHeuristicEfficient
 
calcHeuristic(ClusStatistic, ClusStatistic, ClusStatistic, ClusStatistic) - Method in class si.ijs.kt.clus.ext.semisupervised.ModifiedGainHeuristic
 
calcHeuristic(ClusStatistic, ClusStatistic, ClusStatistic, ClusStatistic) - Method in class si.ijs.kt.clus.heuristic.ClusHeuristicImpl
 
calcHeuristicArslan(ClusStatistic, ClusStatistic, ClusStatistic) - Method in class si.ijs.kt.clus.heuristic.GeneticDistanceHeuristicMatrix
 
calcHeuristicBranchLengths(ClusStatistic, ClusStatistic, ClusStatistic) - Method in class si.ijs.kt.clus.heuristic.GeneticDistanceHeuristicMatrix
 
calcHeuristicMaxMinDistance(ClusStatistic, ClusStatistic, ClusStatistic) - Method in class si.ijs.kt.clus.heuristic.GeneticDistanceHeuristicMatrix
 
calcI(ClusStatistic, ClusStatistic, ClusStatistic, Integer[]) - Method in class si.ijs.kt.clus.heuristic.GISHeuristic
 
calcI(ClusStatistic, ClusStatistic, ClusStatistic, Integer[]) - Method in class si.ijs.kt.clus.heuristic.VarianceReductionHeuristicCompatibility
 
calcItotal(Integer[]) - Method in class si.ijs.kt.clus.statistic.ClassificationStat
 
calcItotal(Integer[]) - Method in class si.ijs.kt.clus.statistic.ClusStatistic
 
calcItotal(Integer[]) - Method in class si.ijs.kt.clus.statistic.RegressionStat
 
calcItotal(Integer[]) - Method in class si.ijs.kt.clus.statistic.WHTDStatistic
 
calcItotalD(Integer[]) - Method in class si.ijs.kt.clus.statistic.ClassificationStat
 
calcItotalD(Integer[]) - Method in class si.ijs.kt.clus.statistic.ClusStatistic
 
calcItotalD(Integer[]) - Method in class si.ijs.kt.clus.statistic.RegressionStat
 
calcItotalD(Integer[]) - Method in class si.ijs.kt.clus.statistic.WHTDStatistic
 
calcIwithNeighbourstotal(Integer[]) - Method in class si.ijs.kt.clus.statistic.ClassificationStat
 
calcIwithNeighbourstotal(Integer[]) - Method in class si.ijs.kt.clus.statistic.ClusStatistic
 
calcIwithNeighbourstotal(Integer[]) - Method in class si.ijs.kt.clus.statistic.RegressionStat
 
calcLeewithNeighbours(Integer[]) - Method in class si.ijs.kt.clus.statistic.ClassificationStat
 
calcLeewithNeighbours(Integer[]) - Method in class si.ijs.kt.clus.statistic.ClusStatistic
 
calcLeewithNeighbours(Integer[]) - Method in class si.ijs.kt.clus.statistic.RegressionStat
 
calcLISAtotal(Integer[]) - Method in class si.ijs.kt.clus.statistic.ClassificationStat
 
calcLISAtotal(Integer[]) - Method in class si.ijs.kt.clus.statistic.ClusStatistic
 
calcLISAtotal(Integer[]) - Method in class si.ijs.kt.clus.statistic.RegressionStat
 
calcLocalGetisTotal(Integer[]) - Method in class si.ijs.kt.clus.statistic.ClassificationStat
 
calcLocalGetisTotal(Integer[]) - Method in class si.ijs.kt.clus.statistic.ClusStatistic
 
calcLocalGetisTotal(Integer[]) - Method in class si.ijs.kt.clus.statistic.RegressionStat
 
calcMaxDepth() - Method in class si.ijs.kt.clus.ext.hierarchical.ClassHierarchy
 
calcMean() - Method in class si.ijs.kt.clus.error.common.multiscore.MultiScoreStat
 
calcMean() - Method in class si.ijs.kt.clus.ext.structuredTypes.SetStatistic
 
calcMean() - Method in class si.ijs.kt.clus.ext.structuredTypes.TupleStatistic
 
calcMean() - Method in class si.ijs.kt.clus.ext.timeseries.TimeSeriesStat
 
calcMean() - Method in class si.ijs.kt.clus.statistic.BitVectorStat
 
calcMean() - Method in class si.ijs.kt.clus.statistic.ClassificationStat
 
calcMean() - Method in class si.ijs.kt.clus.statistic.ClusStatistic
 
calcMean() - Method in class si.ijs.kt.clus.statistic.CombStat
 
calcMean() - Method in class si.ijs.kt.clus.statistic.CombStatClassRegHier
 
calcMean() - Method in class si.ijs.kt.clus.statistic.GeneticDistanceStat
 
calcMean() - Method in class si.ijs.kt.clus.statistic.KnnMlcStat
 
calcMean() - Method in class si.ijs.kt.clus.statistic.RegressionStatBase
 
calcMean() - Method in class si.ijs.kt.clus.statistic.SumPairwiseDistancesStat
 
calcMean() - Method in class si.ijs.kt.clus.statistic.WHTDStatistic
 
calcMean(double[]) - Method in class si.ijs.kt.clus.ext.beamsearch.ClusBeamSimRegrStat
 
calcMean(double[]) - Method in class si.ijs.kt.clus.statistic.RegressionStat
 
calcMean(double[]) - Method in class si.ijs.kt.clus.statistic.RegressionStatBase
 
calcMean(double[]) - Method in class si.ijs.kt.clus.statistic.RegressionStatBinaryNomiss
 
calcMean(double[]) - Method in class si.ijs.kt.clus.statistic.WHTDStatistic
 
calcMeanDepth(ClassTerm, SingleStat) - Static method in class si.ijs.kt.clus.util.tools.hier.GenerateData
Deprecated.
 
calcMeans(ClusStatistic[]) - Static method in class si.ijs.kt.clus.statistic.ClusStatistic
 
calcMeanSpatial() - Method in class si.ijs.kt.clus.statistic.ClassificationStat
 
calcMeanSpatial(double[]) - Method in class si.ijs.kt.clus.statistic.RegressionStat
 
calcMeasures(RowData) - Method in class si.ijs.kt.clus.algo.kNN.KNNStatistics
Deprecated.
Calculates some meaningful measures of the data like mean of each attribute.
calcMinMax(ClusAttrType, double) - Method in class si.ijs.kt.clus.algo.split.CurrentBestTestAndHeuristic
 
calcModelError(ClusStatManager, RowData, ClusModel) - Static method in class si.ijs.kt.clus.Clus
 
calcMultiIwithNeighbours(Integer[]) - Method in class si.ijs.kt.clus.statistic.ClassificationStat
 
calcMultiIwithNeighbours(Integer[]) - Method in class si.ijs.kt.clus.statistic.ClusStatistic
 
calcMultiIwithNeighbours(Integer[]) - Method in class si.ijs.kt.clus.statistic.RegressionStat
 
calcMutivariateItotal(Integer[]) - Method in class si.ijs.kt.clus.statistic.ClassificationStat
 
calcMutivariateItotal(Integer[]) - Method in class si.ijs.kt.clus.statistic.ClusStatistic
 
calcMutivariateItotal(Integer[]) - Method in class si.ijs.kt.clus.statistic.RegressionStat
 
calcMutualInfo() - Method in class si.ijs.kt.clus.error.NominalCorrelation
 
calcNbCorrect(int) - Method in class si.ijs.kt.clus.error.ContingencyTable
 
calcNbCorrect(int[][]) - Method in class si.ijs.kt.clus.error.NominalCorrelation
 
calcNbTotal(int) - Method in class si.ijs.kt.clus.error.ContingencyTable
 
calcNominalMeasures(RowData, NominalAttrType) - Method in class si.ijs.kt.clus.algo.kNN.KNNStatistics
Deprecated.
Calculates the meaningful measures for given nominal attribute in the data : -> find most frequent value for given attribute Also calculates the prototype values of this attribute
calcNumericMeasures(RowData, NumericAttrType) - Method in class si.ijs.kt.clus.algo.kNN.KNNStatistics
Deprecated.
Calculate meaningful measures like mean, variance,max and min for given numerical attribute.
calcolaW() - Static method in class si.ijs.kt.clus.addon.network.PredictionAnalyzer
 
calcOOBError(OOBSelection, RowData, int, ClusRun) - Method in class si.ijs.kt.clus.ext.ensemble.ClusOOBErrorEstimate
 
calcPDistance(Integer[]) - Method in class si.ijs.kt.clus.statistic.ClassificationStat
 
calcPDistance(Integer[]) - Method in class si.ijs.kt.clus.statistic.ClusStatistic
 
calcPDistance(Integer[]) - Method in class si.ijs.kt.clus.statistic.RegressionStat
 
calcPDistance(Integer[]) - Method in class si.ijs.kt.clus.statistic.WHTDStatistic
 
calcPosAndMissStat(NodeTest, int, ClusStatistic, ClusStatistic) - Method in class si.ijs.kt.clus.data.rows.RowData
 
calcPosFreq() - Method in class si.ijs.kt.clus.algo.split.CurrentBestTestAndHeuristic
 
calcPosFreq() - Method in class si.ijs.kt.clus.ext.optiontree.TestAndHeuristic
 
calcPtotal(Integer[]) - Method in class si.ijs.kt.clus.statistic.ClassificationStat
 
calcPtotal(Integer[]) - Method in class si.ijs.kt.clus.statistic.ClusStatistic
 
calcPtotal(Integer[]) - Method in class si.ijs.kt.clus.statistic.RegressionStat
 
calcPtotal(Integer[]) - Method in class si.ijs.kt.clus.statistic.WHTDStatistic
 
calcScores() - Method in class si.ijs.kt.clus.statistic.ClassificationStat
Used in RankingLoss.addExample methods.
CalcStatisticProcessor - Class in si.ijs.kt.clus.model.processor
 
CalcStatisticProcessor(ClusStatistic) - Constructor for class si.ijs.kt.clus.model.processor.CalcStatisticProcessor
 
calcStdDevsForTheSet(RowData, NumericAttrType[]) - Static method in class si.ijs.kt.clus.Clus
Compute standard deviation and mean for each of the given attributes.
calcSumAndSumSqDistances(Set) - Method in class si.ijs.kt.clus.ext.structuredTypes.SetStatistic
 
calcSumAndSumSqDistances(Tuple) - Method in class si.ijs.kt.clus.ext.structuredTypes.TupleStatistic
 
calcSumAndSumSqDistances(TimeSeries) - Method in class si.ijs.kt.clus.ext.timeseries.TimeSeriesStat
 
calcTotalStat(ClusStatistic) - Method in class si.ijs.kt.clus.data.ClusData
 
calcTotalStat(ClusStatistic) - Method in class si.ijs.kt.clus.data.cols.ColTarget
 
calcTotalStat(ClusStatistic) - Method in class si.ijs.kt.clus.data.rows.RowData
 
calcTotalStatBitVector(ClusStatistic) - Method in class si.ijs.kt.clus.data.rows.RowData
 
calcTotalStats() - Method in class si.ijs.kt.clus.ext.optxval.OptXValGroup
 
calcTotalStats(ClusStatistic[]) - Method in class si.ijs.kt.clus.data.ClusData
 
calcTotalStats(ClusStatistic[]) - Method in class si.ijs.kt.clus.ext.optxval.OptXValGroup
 
calcTotalStats2() - Method in class si.ijs.kt.clus.ext.optxval.OptXValGroup
 
calculateAggregateWeights() - Method in class si.ijs.kt.clus.ext.ensemble.ClusOOBWeights
 
calculateAggregateWeights() - Method in class si.ijs.kt.clus.ext.ensemble.ros.ClusROSOOBWeights
 
calculateBI(String, int, double) - Static method in class si.ijs.kt.clus.addon.network.PredictionAnalyzer
 
calculateComponentWeights() - Method in class si.ijs.kt.clus.ext.ensemble.ClusOOBWeights
 
calculateComponentWeights() - Method in class si.ijs.kt.clus.ext.ensemble.ros.ClusROSOOBWeights
 
calculateConfidenceScores(ClusModel, RowData) - Method in class si.ijs.kt.clus.ext.semisupervised.confidence.PredictionConfidence
 
calculateConfidenceScores(ClusModel, RowData) - Method in class si.ijs.kt.clus.ext.semisupervised.confidence.RandomScore
 
calculateConfidenceScores(ClusModel, RowData) - Method in class si.ijs.kt.clus.ext.semisupervised.confidence.regression.RForestProximities
 
calculateConfidenceScores(ClusModel, RowData, boolean) - Method in class si.ijs.kt.clus.ext.semisupervised.confidence.PredictionConfidence
 
calculateCoverageBitVectors(RowData) - Method in class si.ijs.kt.clus.algo.rules.ClusRuleSet
Calculate coverage bit vectors for each rule in the rule set with respect to the provided data
calculateDefaultRuleAndPrototypesForRuleSet(ClusRuleSet) - Method in class si.ijs.kt.clus.algo.rules.probabilistic.ClusRuleProbabilisticRuleSetInduce
Calculate the default rule for a given rule set
calculateDist(DataTuple, DataTuple) - Method in class si.ijs.kt.clus.distance.primitive.relief.MultiLabelDistance
Computes the distance between the sets of labels that belong to tuple one and two.
calculateDist(DataTuple, DataTuple, ClassesAttrType) - Method in class si.ijs.kt.clus.distance.primitive.relief.HierarchicalMultiLabelDistance
Calculates the weighted Euclidean distance between the two classes in the hierarchy, where the weight of a label is m_HierarWeight^depth.
calculateEncodingCost(ClusNode, RowData) - Method in class si.ijs.kt.clus.pruning.EncodingCostPruning
 
calculateError(RowData) - Method in class si.ijs.kt.clus.ext.semisupervised.ClusSemiSupervisedInduce
 
calculateError(ClusModel, RowData, int) - Method in class si.ijs.kt.clus.ext.semisupervised.ClusSemiSupervisedInduce
Calculate error for a given test set By Tomaz: This doesn't seem right, because MODE depends also on clustering attributes.
calculateFrequency(int, int) - Method in class si.ijs.kt.clus.heuristic.EncodingCost
 
calculateGENI3value(ClusNode, ClusRun) - Method in class si.ijs.kt.clus.ext.featureRanking.ensemble.ClusEnsembleFeatureRanking
Deprecated.
calculateGENI3value(ClusNode, ClusStatManager, int) - Method in class si.ijs.kt.clus.ext.featureRanking.ensemble.ClusEnsembleFeatureRanking
 
calculateGENIE3importance(ClusNode, ClusRun) - Method in class si.ijs.kt.clus.ext.featureRanking.ensemble.ClusEnsembleFeatureRanking
Deprecated.
calculateGENIE3importanceIteratively(ClusNode, ClusStatManager) - Method in class si.ijs.kt.clus.ext.featureRanking.ensemble.ClusEnsembleFeatureRanking
An iterative version of ClusEnsembleFeatureRanking.calculateGENIE3importance(si.ijs.kt.clus.algo.tdidt.ClusNode,si.ijs.kt.clus.main.ClusRun), which does not update feature importances in place.
calculateHMinMax(double, ClusAttrType) - Method in class si.ijs.kt.clus.algo.split.CurrentBestTestAndHeuristic
 
calculateHMTRAttribute(ClusReader, DataTuple, ClusSchema, ClusHMTRHierarchy) - Method in class si.ijs.kt.clus.data.type.primitive.NumericAttrType.MySerializable
 
calculateHMTRAttribute(ClusReader, DataTuple, ClusSchema, ClusHMTRHierarchy) - Method in class si.ijs.kt.clus.util.io.ClusSerializable
 
calculateI(String, int, double) - Static method in class si.ijs.kt.clus.addon.network.PredictionAnalyzer
 
calculateLogGammaAlphaValues() - Method in class si.ijs.kt.clus.heuristic.EncodingCost
 
calculateMean(double[]) - Method in class si.ijs.kt.clus.distance.primitive.timeseries.TSCTimeSeriesDist
 
calculateNbRandomAttrSelected(ClusSchema, SettingsEnsemble.RandomAttributeTypeSelection) - Method in class si.ijs.kt.clus.main.settings.section.SettingsEnsemble
 
calculateOOBConfidenceScores(ClusForest, RowData) - Method in class si.ijs.kt.clus.ext.semisupervised.confidence.PredictionConfidence
 
calculateOOBConfidenceScores(ClusForest, RowData) - Method in class si.ijs.kt.clus.ext.semisupervised.confidence.regression.RForestProximities
 
calculatePerTargetOOBScores(ClusForest, DataTuple) - Method in class si.ijs.kt.clus.ext.semisupervised.confidence.classification.ClassesProbabilities
 
calculatePerTargetOOBScores(ClusForest, DataTuple) - Method in class si.ijs.kt.clus.ext.semisupervised.confidence.OracleScore
 
calculatePerTargetOOBScores(ClusForest, DataTuple) - Method in class si.ijs.kt.clus.ext.semisupervised.confidence.PredictionConfidence
Per-target reliability scores for out-of-bag (labeled) examples.
calculatePerTargetOOBScores(ClusForest, DataTuple) - Method in class si.ijs.kt.clus.ext.semisupervised.confidence.RandomScore
 
calculatePerTargetOOBScores(ClusForest, DataTuple) - Method in class si.ijs.kt.clus.ext.semisupervised.confidence.regression.RForestProximities
 
calculatePerTargetOOBScores(ClusForest, DataTuple) - Method in class si.ijs.kt.clus.ext.semisupervised.confidence.regression.VarianceScore
 
calculatePerTargetScores(ClusModel, DataTuple) - Method in class si.ijs.kt.clus.ext.semisupervised.confidence.classification.ClassesProbabilities
 
calculatePerTargetScores(ClusModel, DataTuple) - Method in class si.ijs.kt.clus.ext.semisupervised.confidence.OracleScore
Returns per-target confidence scores
calculatePerTargetScores(ClusModel, DataTuple) - Method in class si.ijs.kt.clus.ext.semisupervised.confidence.PredictionConfidence
Per-target reliability scores for a given tuple.
calculatePerTargetScores(ClusModel, DataTuple) - Method in class si.ijs.kt.clus.ext.semisupervised.confidence.RandomScore
 
calculatePerTargetScores(ClusModel, DataTuple) - Method in class si.ijs.kt.clus.ext.semisupervised.confidence.regression.RForestProximities
 
calculatePerTargetScores(ClusModel, DataTuple) - Method in class si.ijs.kt.clus.ext.semisupervised.confidence.regression.VarianceScore
 
calculatePredictionDistances(ClusBeam, ClusBeamModel) - Method in class si.ijs.kt.clus.ext.beamsearch.ClusBeamModelDistance
 
calculatePredictionDistancesOpt(ClusBeam, ClusBeamModel) - Method in class si.ijs.kt.clus.ext.beamsearch.ClusBeamModelDistance
 
calculateRFimportance(ClusModel, ClusRun, OOBSelection, ClusRandomNonstatic, ClusStatManager) - Method in class si.ijs.kt.clus.ext.featureRanking.ensemble.ClusEnsembleFeatureRanking
 
calculateSYMBOLICimportanceIteratively(ClusNode, String[]) - Method in class si.ijs.kt.clus.ext.featureRanking.ensemble.ClusEnsembleFeatureRanking
Computes partial symbolic importances for all attributes.
calculateWeights() - Method in class si.ijs.kt.clus.ext.ensemble.ClusOOBWeights
Normalize errors to get weights Loss functions (less is better): => RMSE for regression => 1-CA for classification Weights are proportionate to the loss function: 1/error
calcVarianceReductionHeuristic(double, double, double) - Static method in class si.ijs.kt.clus.util.FTest
 
calcWeights() - Method in class si.ijs.kt.clus.ext.hierarchical.ClassHierarchy
 
calcXSquare() - Method in class si.ijs.kt.clus.error.NominalCorrelation
 
calcXSquare(int) - Method in class si.ijs.kt.clus.error.ContingencyTable
 
calcXValTotalStat(ClusStatistic[]) - Method in class si.ijs.kt.clus.data.rows.RowData
 
calcXValTotalStat(ClusStatistic[], ClusStatistic[]) - Method in class si.ijs.kt.clus.data.rows.RowData
 
calibrateByLabelCardinality - Class in si.ijs.kt.clus.ext.hierarchical.thresholdcalibration
Threshold calibration method by choosing the threshold that minimizes the difference in label cardinality between the training data and the predictions for the test data.
calibrateByLabelCardinality(double, double) - Constructor for class si.ijs.kt.clus.ext.hierarchical.thresholdcalibration.calibrateByLabelCardinality
 
call() - Method in class si.ijs.kt.clus.ext.ensemble.callable.InduceOneBagCallable
 
call() - Method in class si.ijs.kt.clus.ext.featureRanking.relief.nearestNeighbour.FindNeighboursCallable
 
callBackFunction(Object) - Method in interface si.ijs.kt.clus.util.jeans.util.CallBackFunction
 
CallBackFunction - Interface in si.ijs.kt.clus.util.jeans.util
 
CallExternGD - Class in si.ijs.kt.clus.util.tools.optimization.gd
 
CallExternGD() - Constructor for class si.ijs.kt.clus.util.tools.optimization.gd.CallExternGD
 
candidates - Variable in class si.ijs.kt.clus.addon.sit.searchAlgorithm.SITFitnessFunction
 
CartMaxSize - Enum constant in enum class si.ijs.kt.clus.main.settings.section.SettingsTree.PruningMethod
 
CartPruning - Class in si.ijs.kt.clus.pruning
 
CartPruning(int[], ClusAttributeWeights) - Constructor for class si.ijs.kt.clus.pruning.CartPruning
 
CartPruning(ClusAttributeWeights, boolean) - Constructor for class si.ijs.kt.clus.pruning.CartPruning
 
CartVisitor - Class in si.ijs.kt.clus.pruning
 
CartVisitor() - Constructor for class si.ijs.kt.clus.pruning.CartVisitor
 
CartVSB - Enum constant in enum class si.ijs.kt.clus.main.settings.section.SettingsTree.PruningMethod
 
CategoryUtility - Enum constant in enum class si.ijs.kt.clus.main.settings.section.SettingsTree.PruningMethod
 
CDTTuneFTest - Class in si.ijs.kt.clus.algo.tdidt.tune
 
CDTTuneFTest(ClusInductionAlgorithmType) - Constructor for class si.ijs.kt.clus.algo.tdidt.tune.CDTTuneFTest
 
CDTTuneFTest(ClusInductionAlgorithmType, double[]) - Constructor for class si.ijs.kt.clus.algo.tdidt.tune.CDTTuneFTest
 
CDTuneSizeConstrPruning - Class in si.ijs.kt.clus.algo.tdidt.tune
 
CDTuneSizeConstrPruning(ClusInductionAlgorithmType) - Constructor for class si.ijs.kt.clus.algo.tdidt.tune.CDTuneSizeConstrPruning
 
changeData(OptimizationProblem.OptimizationParameter) - Method in class si.ijs.kt.clus.util.tools.optimization.OptimizationProblem
Change the data used for learning.
changePruneError(ClusErrorList) - Method in class si.ijs.kt.clus.main.ClusRun
 
changeRuleSetToUndoNormNormalization(ClusRuleSet) - Method in class si.ijs.kt.clus.util.tools.optimization.OptimizationProblem
Changes rule set to undo the changes done to predictions
changesDistribution() - Method in class si.ijs.kt.clus.selection.BagSelection
 
changesDistribution() - Method in class si.ijs.kt.clus.selection.ClusSelection
 
changesDistribution() - Method in class si.ijs.kt.clus.selection.OOBSelection
 
changeTestError(ClusErrorList) - Method in class si.ijs.kt.clus.main.ClusRun
Preparation
changeWeight(double) - Method in class si.ijs.kt.clus.data.rows.DataTuple
 
CHAR_CR - Static variable in class si.ijs.kt.clus.data.io.ClusReader
 
CHAR_NL - Static variable in class si.ijs.kt.clus.data.io.ClusReader
 
CHARSET - Static variable in class si.ijs.kt.clus.main.settings.SettingsBase
 
chartokens - Variable in class si.ijs.kt.clus.util.jeans.util.MStreamTokenizer
 
chartokens - Variable in class si.ijs.kt.clus.util.jeans.util.MStringTokenizer
 
chartokens - Variable in class si.ijs.kt.clus.util.jeans.util.MTokenizer
 
Chebyshev - Enum constant in enum class si.ijs.kt.clus.main.settings.section.SettingsKNN.Distance
 
ChebyshevDistance - Class in si.ijs.kt.clus.distance.primitive
 
ChebyshevDistance(SearchDistance, boolean, ClusAttrType[]) - Constructor for class si.ijs.kt.clus.distance.primitive.ChebyshevDistance
 
check() - Method in class si.ijs.kt.clus.main.ClusStatManager
 
check() - Method in class si.ijs.kt.clus.model.ClusModelInfo
 
checkAcceptable(ClusStatistic, ClusStatistic) - Method in class si.ijs.kt.clus.algo.split.CurrentBestTestAndHeuristic
 
checkAcceptable(ClusStatistic, ClusStatistic) - Method in class si.ijs.kt.clus.ext.optiontree.TestAndHeuristic
 
checkAtEnd(LineNumberReader) - Static method in class si.ijs.kt.clus.model.io.ClusTreeReader
 
checkChildren() - Method in class si.ijs.kt.clus.error.common.ClusErrorList
 
checkConstraints(DataTuple, int, int[]) - Method in class si.ijs.kt.clus.ext.ilevelc.COPKMeans
 
checkCoverage(ClusModelInfoList, int, int) - Static method in class si.ijs.kt.clus.error.common.ClusErrorList
 
checkData(boolean) - Method in class si.ijs.kt.clus.data.rows.RowData
 
checkDelim() - Method in class si.ijs.kt.clus.util.jeans.util.MultiDelimStringTokenizer
 
checkIfBest(DEIndividual) - Method in class si.ijs.kt.clus.util.tools.optimization.de.DEAlgorithm
Checks if the individual is the new best.
checkInvariant() - Method in class si.ijs.kt.clus.ext.timeseries.TimeSeriesStat
For debugging purposes.
checkModelInfo() - Method in class si.ijs.kt.clus.main.ClusModelInfoList
 
checkPartialTreeAllowed(String) - Method in class si.ijs.kt.clus.model.io.ClusTreeReader
 
checkRange(IntervalCollection, String) - Method in class si.ijs.kt.clus.data.ClusSchema
 
checkSetDistance(SettingsTree.SetDistance) - Method in class si.ijs.kt.clus.main.settings.section.SettingsTree
 
checkStopCriterion(GeneticDistanceStat, GeneticDistanceStat, GeneticDistanceStat) - Method in class si.ijs.kt.clus.heuristic.GeneticDistanceHeuristicMatrix
 
checkTimeSeriesDistance(SettingsTimeSeries.TimeSeriesDistanceMeasure) - Method in class si.ijs.kt.clus.main.settings.section.SettingsTimeSeries
 
checkToOutEnsemble(int) - Method in class si.ijs.kt.clus.ext.ensemble.ClusEnsembleInduce
 
checkTotalWeight() - Method in class si.ijs.kt.clus.algo.tdidt.ClusNode
 
checkTupleDistance(SettingsTree.TupleDistance) - Method in class si.ijs.kt.clus.main.settings.section.SettingsTree
 
checkValue(Object) - Method in class si.ijs.kt.clus.util.jeans.io.range.DoubleRangeCheck
 
checkValue(Object) - Method in class si.ijs.kt.clus.util.jeans.io.range.IntRangeCheck
 
checkValue(Object) - Method in interface si.ijs.kt.clus.util.jeans.io.range.ValueCheck
 
CI - Enum constant in enum class si.ijs.kt.clus.main.settings.section.SettingsTree.SpatialMeasure
 
CIDistance - Enum constant in enum class si.ijs.kt.clus.main.settings.section.SettingsTree.SpatialMeasure
 
CIwithNeighbours - Enum constant in enum class si.ijs.kt.clus.main.settings.section.SettingsTree.SpatialMeasure
 
Classes - Enum constant in enum class si.ijs.kt.clus.data.type.ClusAttrType.AttributeType
 
ClassesAttrType - Class in si.ijs.kt.clus.data.type.hierarchies
 
ClassesAttrType(String) - Constructor for class si.ijs.kt.clus.data.type.hierarchies.ClassesAttrType
 
ClassesAttrType(String, String) - Constructor for class si.ijs.kt.clus.data.type.hierarchies.ClassesAttrType
 
ClassesAttrType(String, ClassHierarchy) - Constructor for class si.ijs.kt.clus.data.type.hierarchies.ClassesAttrType
 
ClassesAttrType.MySerializable - Class in si.ijs.kt.clus.data.type.hierarchies
 
ClassesAttrTypeSingleLabel - Class in si.ijs.kt.clus.data.type.hierarchies
 
ClassesAttrTypeSingleLabel(String) - Constructor for class si.ijs.kt.clus.data.type.hierarchies.ClassesAttrTypeSingleLabel
 
ClassesAttrTypeSingleLabel(String, String) - Constructor for class si.ijs.kt.clus.data.type.hierarchies.ClassesAttrTypeSingleLabel
 
ClassesAttrTypeSingleLabel(String, ClassHierarchy) - Constructor for class si.ijs.kt.clus.data.type.hierarchies.ClassesAttrTypeSingleLabel
 
ClassesProbabilities - Class in si.ijs.kt.clus.ext.semisupervised.confidence.classification
Calculate the confidence of prediction for the multi-target classification as follows: For each target, get the max classification probability (i.e., majority) among possible class values.
ClassesProbabilities - Enum constant in enum class si.ijs.kt.clus.main.settings.section.SettingsSSL.SSLConfidenceMeasure
Reliability score for MLC and HMLC, based on empirical probabilities of classes
ClassesProbabilities(ClusStatManager, SettingsSSL.SSLNormalization, SettingsSSL.SSLAggregation) - Constructor for class si.ijs.kt.clus.ext.semisupervised.confidence.classification.ClassesProbabilities
 
ClassesTuple - Class in si.ijs.kt.clus.ext.hierarchical
 
ClassesTuple() - Constructor for class si.ijs.kt.clus.ext.hierarchical.ClassesTuple
 
ClassesTuple(int) - Constructor for class si.ijs.kt.clus.ext.hierarchical.ClassesTuple
 
ClassesTuple(String, StringTable) - Constructor for class si.ijs.kt.clus.ext.hierarchical.ClassesTuple
 
ClassesValue - Class in si.ijs.kt.clus.ext.hierarchical
 
ClassesValue(int) - Constructor for class si.ijs.kt.clus.ext.hierarchical.ClassesValue
 
ClassesValue(String, StringTable) - Constructor for class si.ijs.kt.clus.ext.hierarchical.ClassesValue
 
ClassesValue(ClassTerm) - Constructor for class si.ijs.kt.clus.ext.hierarchical.ClassesValue
 
ClassesValue(ClassTerm, double) - Constructor for class si.ijs.kt.clus.ext.hierarchical.ClassesValue
 
ClassHierarchy - Class in si.ijs.kt.clus.ext.hierarchical
 
ClassHierarchy() - Constructor for class si.ijs.kt.clus.ext.hierarchical.ClassHierarchy
 
ClassHierarchy(ClassesAttrType) - Constructor for class si.ijs.kt.clus.ext.hierarchical.ClassHierarchy
 
ClassHierarchy(ClassTerm) - Constructor for class si.ijs.kt.clus.ext.hierarchical.ClassHierarchy
 
ClassHierarchyIO - Class in si.ijs.kt.clus.ext.hierarchical
 
ClassHierarchyIO() - Constructor for class si.ijs.kt.clus.ext.hierarchical.ClassHierarchyIO
 
ClassHierarchyPreproc - Class in si.ijs.kt.clus.ext.hierarchical
 
ClassHierarchyPreproc(ClassesAttrType, boolean) - Constructor for class si.ijs.kt.clus.ext.hierarchical.ClassHierarchyPreproc
 
Classic - Class in si.ijs.kt.clus.ext.featureRanking.relief.statistics
 
Classic(ClusReliefFeatureRanking, int, int, int) - Constructor for class si.ijs.kt.clus.ext.featureRanking.relief.statistics.Classic
 
CLASSIFICATION - Enum constant in enum class si.ijs.kt.clus.main.ClusStatManager.TargetType
 
ClassificationStat - Class in si.ijs.kt.clus.statistic
Classification statistics about the data.
ClassificationStat(Settings, NominalAttrType[]) - Constructor for class si.ijs.kt.clus.statistic.ClassificationStat
Constructor for this class.
ClassificationStat(Settings, NominalAttrType[], INIFileNominalOrDoubleOrVector) - Constructor for class si.ijs.kt.clus.statistic.ClassificationStat
Constructor for this class in the case of multi-label setting.
ClassificationStat.Distance - Class in si.ijs.kt.clus.statistic
 
ClassificationStat.DistanceB - Class in si.ijs.kt.clus.statistic
 
CLASSIFY - Enum constant in enum class si.ijs.kt.clus.main.ClusStatManager.Mode
 
CLASSIFY_AND_REGRESSION - Enum constant in enum class si.ijs.kt.clus.main.ClusStatManager.Mode
 
ClassTerm - Class in si.ijs.kt.clus.ext.hierarchical
 
ClassTerm() - Constructor for class si.ijs.kt.clus.ext.hierarchical.ClassTerm
 
ClassTerm(String) - Constructor for class si.ijs.kt.clus.ext.hierarchical.ClassTerm
 
cleanFolds() - Method in class si.ijs.kt.clus.ext.optxval.OptXValGroup
 
cleanNode(int) - Method in class si.ijs.kt.clus.ext.optxval.OptXValGroup
 
cleanSplit() - Method in class si.ijs.kt.clus.algo.split.FindBestTest
 
cleanSplit() - Method in class si.ijs.kt.clus.algo.tdidt.DepthFirstInduce
 
cleanSplit() - Method in class si.ijs.kt.clus.ext.bestfirst.BestFirstInduce
 
cleanSplit() - Method in class si.ijs.kt.clus.ext.optxval.OptXValInduce
 
cleanup() - Method in class si.ijs.kt.clus.algo.tdidt.ClusNode
 
clear() - Method in class si.ijs.kt.clus.error.BinaryPredictionList
 
clear() - Method in class si.ijs.kt.clus.error.common.ClusErrorList
 
clear() - Method in class si.ijs.kt.clus.error.ROCAndPRCurve
 
clear() - Method in class si.ijs.kt.clus.util.jeans.util.array.MDoubleArray
 
clear() - Method in class si.ijs.kt.clus.util.jeans.util.array.MIntArray
 
clear() - Method in class si.ijs.kt.clus.util.jeans.util.IntegerStack
 
clear() - Method in class si.ijs.kt.clus.util.jeans.util.IntervalCollection
 
clearAll() - Method in class si.ijs.kt.clus.model.ClusModelInfo
 
clearAttributeStatusClusteringAndTarget() - Method in class si.ijs.kt.clus.data.ClusSchema
 
clearData() - Method in class si.ijs.kt.clus.error.BinaryPredictionList
 
clearData() - Method in class si.ijs.kt.clus.ext.ilevelc.COPKMeansCluster
 
clearDataFromClusters() - Method in class si.ijs.kt.clus.ext.ilevelc.COPKMeans
 
clearMissingFlagTargetAttrs(ClusSchema) - Static method in class si.ijs.kt.clus.selection.CriterionBasedSelection
 
clearVisitors() - Method in class si.ijs.kt.clus.algo.tdidt.ClusNode
 
clone() - Method in class si.ijs.kt.clus.ext.ensemble.ros.ClusROSModelInfo
 
clone(double[]) - Static method in class si.ijs.kt.clus.util.jeans.util.array.MDoubleArray
 
clone(Object, IDeepCloner, Map<Object, Object>) - Method in class si.ijs.kt.clus.util.cloner.FastClonerArrayList
 
clone(Object, IDeepCloner, Map<Object, Object>) - Method in class si.ijs.kt.clus.util.cloner.FastClonerCalendar
 
clone(Object, IDeepCloner, Map<Object, Object>) - Method in class si.ijs.kt.clus.util.cloner.FastClonerConcurrentHashMap
 
clone(Object, IDeepCloner, Map<Object, Object>) - Method in class si.ijs.kt.clus.util.cloner.FastClonerCustomCollection
 
clone(Object, IDeepCloner, Map<Object, Object>) - Method in class si.ijs.kt.clus.util.cloner.FastClonerCustomMap
 
clone(Object, IDeepCloner, Map<Object, Object>) - Method in class si.ijs.kt.clus.util.cloner.FastClonerHashMap
 
clone(Object, IDeepCloner, Map<Object, Object>) - Method in class si.ijs.kt.clus.util.cloner.FastClonerHashSet
 
clone(Object, IDeepCloner, Map<Object, Object>) - Method in class si.ijs.kt.clus.util.cloner.FastClonerLinkedHashMap
 
clone(Object, IDeepCloner, Map<Object, Object>) - Method in class si.ijs.kt.clus.util.cloner.FastClonerLinkedList
 
clone(Object, IDeepCloner, Map<Object, Object>) - Method in class si.ijs.kt.clus.util.cloner.FastClonerTreeMap
 
clone(Object, IDeepCloner, Map<Object, Object>) - Method in interface si.ijs.kt.clus.util.cloner.IFastCloner
 
cloneBoostingForestWithThreshold(double) - Method in class si.ijs.kt.clus.ext.ensemble.ClusBoostingForest
 
cloneData() - Method in class si.ijs.kt.clus.data.ClusData
 
cloneData() - Method in class si.ijs.kt.clus.data.rows.RowData
 
cloneDeep() - Method in class si.ijs.kt.clus.algo.rules.ClusRuleSet
 
cloneForestWithThreshold(double) - Method in class si.ijs.kt.clus.ext.ensemble.ClusForest
 
cloneFrom(ClassesTuple) - Method in class si.ijs.kt.clus.ext.hierarchical.ClassesTuple
 
cloneFrom(BitVectorStat) - Method in class si.ijs.kt.clus.statistic.BitVectorStat
 
cloneFrom(GeneticDistanceStat) - Method in class si.ijs.kt.clus.statistic.GeneticDistanceStat
 
cloneGroup() - Method in class si.ijs.kt.clus.ext.optxval.OptXValGroup
 
cloneInternal(T, Map<Object, Object>) - Method in class si.ijs.kt.clus.util.cloner.Cloner
 
cloneList() - Method in class si.ijs.kt.clus.util.jeans.list.BitList
 
cloneModel() - Method in class si.ijs.kt.clus.ext.beamsearch.ClusBeamModel
 
cloneModelInfo() - Method in class si.ijs.kt.clus.model.ClusModelInfo
 
cloneModels() - Method in class si.ijs.kt.clus.main.ClusModelInfoList
************************************************************************* Functions for all models
cloneNode() - Method in class si.ijs.kt.clus.algo.tdidt.ClusNode
 
cloneNode() - Method in class si.ijs.kt.clus.ext.optiontree.ClusOptionNode
 
cloneNode() - Method in class si.ijs.kt.clus.ext.optiontree.ClusSplitNode
Inspectors concerning statistics
cloneNode() - Method in class si.ijs.kt.clus.ext.optiontree.MyNode
 
cloneNode() - Method in class si.ijs.kt.clus.util.jeans.io.ini.INIFileArray
 
cloneNode() - Method in class si.ijs.kt.clus.util.jeans.io.ini.INIFileBool
 
cloneNode() - Method in class si.ijs.kt.clus.util.jeans.io.ini.INIFileDouble
 
cloneNode() - Method in class si.ijs.kt.clus.util.jeans.io.ini.INIFileEnum
 
cloneNode() - Method in class si.ijs.kt.clus.util.jeans.io.ini.INIFileEnumList
 
cloneNode() - Method in class si.ijs.kt.clus.util.jeans.io.ini.INIFileInt
 
cloneNode() - Method in class si.ijs.kt.clus.util.jeans.io.ini.INIFileNode
 
cloneNode() - Method in class si.ijs.kt.clus.util.jeans.io.ini.INIFileNominal
 
cloneNode() - Method in class si.ijs.kt.clus.util.jeans.io.ini.INIFileNominalOrDoubleOrVector
 
cloneNode() - Method in class si.ijs.kt.clus.util.jeans.io.ini.INIFileNominalOrIntOrVector
 
cloneNode() - Method in class si.ijs.kt.clus.util.jeans.io.ini.INIFileSection
 
cloneNode() - Method in class si.ijs.kt.clus.util.jeans.io.ini.INIFileSectionGroup
 
cloneNode() - Method in class si.ijs.kt.clus.util.jeans.io.ini.INIFileString
 
cloneNode() - Method in class si.ijs.kt.clus.util.jeans.io.ini.INIFileStringOrDouble
 
cloneNode() - Method in class si.ijs.kt.clus.util.jeans.io.ini.INIFileStringOrInt
 
cloneNode() - Method in class si.ijs.kt.clus.util.jeans.tree.MyNode
 
cloneNodeWithVisitor() - Method in class si.ijs.kt.clus.algo.tdidt.ClusNode
 
cloneNoModel() - Method in class si.ijs.kt.clus.ext.beamsearch.ClusBeamModel
 
Cloner - Class in si.ijs.kt.clus.util.cloner
Cloner: deep clone objects.
Cloner() - Constructor for class si.ijs.kt.clus.util.cloner.Cloner
 
Cloner(IInstantiationStrategy) - Constructor for class si.ijs.kt.clus.util.cloner.Cloner
 
cloneRule() - Method in class si.ijs.kt.clus.algo.rules.ClusRule
 
cloneRuleSet() - Method in class si.ijs.kt.clus.algo.rules.ClusRuleSet
Clones the rule set so that it points to the same rules.
cloneRuleSetNonUnique() - Method in class si.ijs.kt.clus.algo.rules.ClusRuleSet
 
cloneRuleSetWithThreshold(double) - Method in class si.ijs.kt.clus.algo.rules.ClusRuleSet
Deep clones this ruleset, so that it points to different rules that have target statistics with the given threshold.
cloneSchema() - Method in class si.ijs.kt.clus.data.ClusSchema
 
cloneSimple() - Method in class si.ijs.kt.clus.ext.beamsearch.ClusBeamSimRegrStat
 
cloneSimple() - Method in class si.ijs.kt.clus.ext.structuredTypes.SetStatistic
 
cloneSimple() - Method in class si.ijs.kt.clus.ext.structuredTypes.TupleStatistic
 
cloneSimple() - Method in class si.ijs.kt.clus.ext.timeseries.TimeSeriesStat
 
cloneSimple() - Method in class si.ijs.kt.clus.statistic.ClusStatistic
Statistic with only memory allocated for storing mean / not variance, see e.g.
cloneSimple() - Method in class si.ijs.kt.clus.statistic.CombStat
 
cloneSimple() - Method in class si.ijs.kt.clus.statistic.CombStatClassRegHier
 
cloneSimple() - Method in class si.ijs.kt.clus.statistic.GISStat
Deprecated.
 
cloneSimple() - Method in class si.ijs.kt.clus.statistic.RegressionStat
 
cloneSimple() - Method in class si.ijs.kt.clus.statistic.RegressionStatBinaryNomiss
 
cloneSimple() - Method in class si.ijs.kt.clus.statistic.WHTDStatistic
 
cloneStat() - Method in class si.ijs.kt.clus.error.common.multiscore.MultiScoreStat
 
cloneStat() - Method in class si.ijs.kt.clus.ext.beamsearch.ClusBeamSimClassStat
 
cloneStat() - Method in class si.ijs.kt.clus.ext.beamsearch.ClusBeamSimRegrStat
 
cloneStat() - Method in class si.ijs.kt.clus.ext.ilevelc.ILevelCStatistic
 
cloneStat() - Method in class si.ijs.kt.clus.ext.structuredTypes.SetStatistic
 
cloneStat() - Method in class si.ijs.kt.clus.ext.structuredTypes.TupleStatistic
 
cloneStat() - Method in class si.ijs.kt.clus.ext.timeseries.TimeSeriesStat
 
cloneStat() - Method in class si.ijs.kt.clus.statistic.BitVectorStat
 
cloneStat() - Method in class si.ijs.kt.clus.statistic.ClassificationStat
 
cloneStat() - Method in class si.ijs.kt.clus.statistic.ClusStatistic
 
cloneStat() - Method in class si.ijs.kt.clus.statistic.CombStat
 
cloneStat() - Method in class si.ijs.kt.clus.statistic.CombStatClassRegHier
 
cloneStat() - Method in class si.ijs.kt.clus.statistic.GeneticDistanceStat
 
cloneStat() - Method in class si.ijs.kt.clus.statistic.GISStat
Deprecated.
 
cloneStat() - Method in class si.ijs.kt.clus.statistic.HierSingleLabelStat
 
cloneStat() - Method in class si.ijs.kt.clus.statistic.HierSumPairwiseDistancesStat
 
cloneStat() - Method in class si.ijs.kt.clus.statistic.KnnMlcStat
 
cloneStat() - Method in class si.ijs.kt.clus.statistic.RegressionStat
 
cloneStat() - Method in class si.ijs.kt.clus.statistic.RegressionStatBinaryNomiss
 
cloneStat() - Method in class si.ijs.kt.clus.statistic.SumPairwiseDistancesStat
 
cloneStat() - Method in class si.ijs.kt.clus.statistic.WHTDStatistic
 
cloneTree() - Method in class si.ijs.kt.clus.ext.optiontree.MyNode
 
cloneTree() - Method in class si.ijs.kt.clus.util.jeans.tree.MyNode
 
cloneTree(MyNode, MyNode) - Method in class si.ijs.kt.clus.ext.optiontree.MyNode
 
cloneTree(MyNode, MyNode) - Method in class si.ijs.kt.clus.util.jeans.tree.MyNode
 
cloneTreeWithVisitors() - Method in class si.ijs.kt.clus.algo.tdidt.ClusNode
 
cloneTreeWithVisitors(ClusNode, ClusNode) - Method in class si.ijs.kt.clus.algo.tdidt.ClusNode
 
cloneTuple() - Method in class si.ijs.kt.clus.data.rows.DataTuple
 
cloneTuple() - Method in class si.ijs.kt.clus.data.rows.SparseDataTuple
 
cloneTuple(DataTuple) - Method in class si.ijs.kt.clus.data.rows.DataTuple
 
cloneType() - Method in class si.ijs.kt.clus.data.type.BitwiseNominalAttrType
 
cloneType() - Method in class si.ijs.kt.clus.data.type.ClusAttrType
 
cloneType() - Method in class si.ijs.kt.clus.data.type.complex.SetAttrType
 
cloneType() - Method in class si.ijs.kt.clus.data.type.complex.TupleAttrType
 
cloneType() - Method in class si.ijs.kt.clus.data.type.hierarchies.ClassesAttrType
 
cloneType() - Method in class si.ijs.kt.clus.data.type.hierarchies.ClassesAttrTypeSingleLabel
 
cloneType() - Method in class si.ijs.kt.clus.data.type.primitive.IndexAttrType
 
cloneType() - Method in class si.ijs.kt.clus.data.type.primitive.IntegerAttrType
 
cloneType() - Method in class si.ijs.kt.clus.data.type.primitive.NominalAttrType
 
cloneType() - Method in class si.ijs.kt.clus.data.type.primitive.NumericAttrType
 
cloneType() - Method in class si.ijs.kt.clus.data.type.primitive.SparseNumericAttrType
 
cloneType() - Method in class si.ijs.kt.clus.data.type.primitive.StringAttrType
 
cloneType() - Method in class si.ijs.kt.clus.data.type.primitive.TimeSeriesAttrType
 
cloneType(ClusAttrType) - Method in class si.ijs.kt.clus.data.type.ClusAttrType
 
cloning(Field, Class<?>) - Method in interface si.ijs.kt.clus.util.cloner.IDumpCloned
 
CloningException - Exception Class in si.ijs.kt.clus.util.cloner
thrown if cloning fails
CloningException(String, Throwable) - Constructor for exception class si.ijs.kt.clus.util.cloner.CloningException
 
close() - Method in class si.ijs.kt.clus.data.io.ClusReader
 
close() - Method in class si.ijs.kt.clus.data.rows.FileTupleIterator
 
close() - Method in class si.ijs.kt.clus.data.rows.TupleIterator
 
close() - Method in class si.ijs.kt.clus.main.ClusOutput
 
close() - Method in class si.ijs.kt.clus.model.processor.PredictionWriter
 
close() - Static method in class si.ijs.kt.clus.util.DebugFile
 
close() - Method in class si.ijs.kt.clus.util.jeans.io.MyFile
 
close() - Method in class si.ijs.kt.clus.util.jeans.io.ObjectSaveStream
Closes a file previously opened for saving
close() - Method in class si.ijs.kt.clus.util.jeans.util.MStreamTokenizer
 
closeEntry() - Method in class si.ijs.kt.clus.util.jeans.io.ObjectSaveStream
 
closeWriter() - Method in class si.ijs.kt.clus.model.processor.ClusEnsemblePredictionWriter
 
ClosureListener() - Constructor for class si.ijs.kt.clus.addon.ILevelC.ilevelc.ILevelCGUI.ClosureListener
 
Clus - Class in si.ijs.kt.clus
 
Clus() - Constructor for class si.ijs.kt.clus.Clus
 
Clus.DebugType - Enum Class in si.ijs.kt.clus
 
ClusAmandaRules - Class in si.ijs.kt.clus.addon.hmc.ClusAmandaRules
 
ClusAmandaRules() - Constructor for class si.ijs.kt.clus.addon.hmc.ClusAmandaRules.ClusAmandaRules
 
ClusAttribute - Class in si.ijs.kt.clus.data.cols.attribute
 
ClusAttribute() - Constructor for class si.ijs.kt.clus.data.cols.attribute.ClusAttribute
 
ClusAttributeWeights - Class in si.ijs.kt.clus.data.attweights
 
ClusAttributeWeights(int) - Constructor for class si.ijs.kt.clus.data.attweights.ClusAttributeWeights
 
ClusAttrType - Class in si.ijs.kt.clus.data.type
 
ClusAttrType(String) - Constructor for class si.ijs.kt.clus.data.type.ClusAttrType
 
ClusAttrType(String, String) - Constructor for class si.ijs.kt.clus.data.type.ClusAttrType
 
ClusAttrType.AttributeType - Enum Class in si.ijs.kt.clus.data.type
 
ClusAttrType.AttributeUseType - Enum Class in si.ijs.kt.clus.data.type
 
ClusAttrType.Status - Enum Class in si.ijs.kt.clus.data.type
 
ClusAttrType.ValueType - Enum Class in si.ijs.kt.clus.data.type
 
ClusBeam - Class in si.ijs.kt.clus.ext.beamsearch
 
ClusBeam(int, boolean) - Constructor for class si.ijs.kt.clus.ext.beamsearch.ClusBeam
 
ClusBeamAttrSelector - Class in si.ijs.kt.clus.ext.beamsearch
 
ClusBeamAttrSelector() - Constructor for class si.ijs.kt.clus.ext.beamsearch.ClusBeamAttrSelector
 
ClusBeamHeuristic - Class in si.ijs.kt.clus.ext.beamsearch
 
ClusBeamHeuristic(ClusStatistic, Settings) - Constructor for class si.ijs.kt.clus.ext.beamsearch.ClusBeamHeuristic
 
ClusBeamHeuristicError - Class in si.ijs.kt.clus.ext.beamsearch
 
ClusBeamHeuristicError(ClusStatistic, Settings) - Constructor for class si.ijs.kt.clus.ext.beamsearch.ClusBeamHeuristicError
 
ClusBeamHeuristicMEstimate - Class in si.ijs.kt.clus.ext.beamsearch
 
ClusBeamHeuristicMEstimate(ClusStatistic, double, Settings) - Constructor for class si.ijs.kt.clus.ext.beamsearch.ClusBeamHeuristicMEstimate
 
ClusBeamHeuristicMorishita - Class in si.ijs.kt.clus.ext.beamsearch
 
ClusBeamHeuristicMorishita(ClusStatistic, Settings) - Constructor for class si.ijs.kt.clus.ext.beamsearch.ClusBeamHeuristicMorishita
 
ClusBeamHeuristicSS - Class in si.ijs.kt.clus.ext.beamsearch
 
ClusBeamHeuristicSS(ClusStatistic, ClusAttributeWeights, Settings) - Constructor for class si.ijs.kt.clus.ext.beamsearch.ClusBeamHeuristicSS
 
ClusBeamInduce - Class in si.ijs.kt.clus.ext.beamsearch
 
ClusBeamInduce(ClusSchema, Settings, ClusBeamSearch) - Constructor for class si.ijs.kt.clus.ext.beamsearch.ClusBeamInduce
 
ClusBeamModel - Class in si.ijs.kt.clus.ext.beamsearch
 
ClusBeamModel() - Constructor for class si.ijs.kt.clus.ext.beamsearch.ClusBeamModel
 
ClusBeamModel(double, ClusModel) - Constructor for class si.ijs.kt.clus.ext.beamsearch.ClusBeamModel
 
ClusBeamModelDistance - Class in si.ijs.kt.clus.ext.beamsearch
 
ClusBeamModelDistance(ClusRun, ClusBeam) - Constructor for class si.ijs.kt.clus.ext.beamsearch.ClusBeamModelDistance
 
ClusBeamSearch - Class in si.ijs.kt.clus.ext.beamsearch
 
ClusBeamSearch(Clus) - Constructor for class si.ijs.kt.clus.ext.beamsearch.ClusBeamSearch
 
ClusBeamSimClassStat - Class in si.ijs.kt.clus.ext.beamsearch
 
ClusBeamSimClassStat(Settings, NominalAttrType[], ClusBeam) - Constructor for class si.ijs.kt.clus.ext.beamsearch.ClusBeamSimClassStat
 
ClusBeamSimilarityOutput - Class in si.ijs.kt.clus.ext.beamsearch
 
ClusBeamSimilarityOutput(Settings) - Constructor for class si.ijs.kt.clus.ext.beamsearch.ClusBeamSimilarityOutput
 
ClusBeamSimRegrStat - Class in si.ijs.kt.clus.ext.beamsearch
 
ClusBeamSimRegrStat(Settings, NumericAttrType[], boolean, ClusBeam) - Constructor for class si.ijs.kt.clus.ext.beamsearch.ClusBeamSimRegrStat
 
ClusBeamSimRegrStat(Settings, NumericAttrType[], ClusBeam) - Constructor for class si.ijs.kt.clus.ext.beamsearch.ClusBeamSimRegrStat
 
ClusBeamSizeConstraintInfo - Class in si.ijs.kt.clus.ext.beamsearch
 
ClusBeamSizeConstraintInfo(int) - Constructor for class si.ijs.kt.clus.ext.beamsearch.ClusBeamSizeConstraintInfo
 
ClusBeamSizeConstraints - Class in si.ijs.kt.clus.ext.beamsearch
 
ClusBeamSizeConstraints() - Constructor for class si.ijs.kt.clus.ext.beamsearch.ClusBeamSizeConstraints
 
ClusBeamSyntacticConstraint - Class in si.ijs.kt.clus.ext.beamsearch
 
ClusBeamSyntacticConstraint(ClusRun) - Constructor for class si.ijs.kt.clus.ext.beamsearch.ClusBeamSyntacticConstraint
 
ClusBeamTreeElem - Class in si.ijs.kt.clus.ext.beamsearch
 
ClusBeamTreeElem(ClusBeamModel) - Constructor for class si.ijs.kt.clus.ext.beamsearch.ClusBeamTreeElem
 
ClusBeamTreeElemOld - Class in si.ijs.kt.clus.ext.beamsearch
 
ClusBeamTreeElemOld(ClusBeamModel) - Constructor for class si.ijs.kt.clus.ext.beamsearch.ClusBeamTreeElemOld
 
ClusBoostingForest - Class in si.ijs.kt.clus.ext.ensemble
 
ClusBoostingForest(ClusStatManager) - Constructor for class si.ijs.kt.clus.ext.ensemble.ClusBoostingForest
 
ClusBoostingInduce - Class in si.ijs.kt.clus.ext.ensemble
 
ClusBoostingInduce(ClusSchema, Settings) - Constructor for class si.ijs.kt.clus.ext.ensemble.ClusBoostingInduce
 
ClusCalcRuleErrorProc - Class in si.ijs.kt.clus.algo.rules
 
ClusCalcRuleErrorProc(int, ClusErrorList) - Constructor for class si.ijs.kt.clus.algo.rules.ClusCalcRuleErrorProc
 
ClusConstraintFile - Class in si.ijs.kt.clus.ext.constraint
 
ClusConstraintFile() - Constructor for class si.ijs.kt.clus.ext.constraint.ClusConstraintFile
 
ClusData - Class in si.ijs.kt.clus.data
 
ClusData() - Constructor for class si.ijs.kt.clus.data.ClusData
 
ClusDecisionTree - Class in si.ijs.kt.clus.algo.tdidt
 
ClusDecisionTree(Clus) - Constructor for class si.ijs.kt.clus.algo.tdidt.ClusDecisionTree
 
ClusDistance - Class in si.ijs.kt.clus.distance
 
ClusDistance() - Constructor for class si.ijs.kt.clus.distance.ClusDistance
 
ClusEnsembleClassifier - Class in si.ijs.kt.clus.ext.ensemble
 
ClusEnsembleClassifier(Clus) - Constructor for class si.ijs.kt.clus.ext.ensemble.ClusEnsembleClassifier
 
ClusEnsembleFeatureRanking - Class in si.ijs.kt.clus.ext.featureRanking.ensemble
 
ClusEnsembleFeatureRanking(Settings, SettingsEnsemble.EnsembleRanking, ClusEnsembleFeatureRankings) - Constructor for class si.ijs.kt.clus.ext.featureRanking.ensemble.ClusEnsembleFeatureRanking
 
ClusEnsembleFeatureRankings - Class in si.ijs.kt.clus.ext.featureRanking.ensemble
 
ClusEnsembleFeatureRankings(Settings) - Constructor for class si.ijs.kt.clus.ext.featureRanking.ensemble.ClusEnsembleFeatureRankings
 
ClusEnsembleInduce - Class in si.ijs.kt.clus.ext.ensemble
 
ClusEnsembleInduce(ClusInductionAlgorithm, Clus) - Constructor for class si.ijs.kt.clus.ext.ensemble.ClusEnsembleInduce
 
ClusEnsembleInduce(ClusSchema, Settings, Clus) - Constructor for class si.ijs.kt.clus.ext.ensemble.ClusEnsembleInduce
 
ClusEnsembleInduce.ParallelTrap - Enum Class in si.ijs.kt.clus.ext.ensemble
Random tree depths for different iterations, used for tree to rules optimization procedures.
ClusEnsembleInduceOptClassification - Class in si.ijs.kt.clus.ext.ensemble
 
ClusEnsembleInduceOptClassification(TupleIterator, TupleIterator, Settings) - Constructor for class si.ijs.kt.clus.ext.ensemble.ClusEnsembleInduceOptClassification
 
ClusEnsembleInduceOptimization - Class in si.ijs.kt.clus.ext.ensemble
 
ClusEnsembleInduceOptimization(TupleIterator, TupleIterator, Settings) - Constructor for class si.ijs.kt.clus.ext.ensemble.ClusEnsembleInduceOptimization
 
ClusEnsembleInduceOptRegHMLC - Class in si.ijs.kt.clus.ext.ensemble
 
ClusEnsembleInduceOptRegHMLC(TupleIterator, TupleIterator, Settings) - Constructor for class si.ijs.kt.clus.ext.ensemble.ClusEnsembleInduceOptRegHMLC
 
ClusEnsemblePredictionWriter - Class in si.ijs.kt.clus.model.processor
Writing the predictions from the ensemble in a separate file, their standard deviations from the voting procedure and the respective votes from each base classifier.
ClusEnsemblePredictionWriter(String) - Constructor for class si.ijs.kt.clus.model.processor.ClusEnsemblePredictionWriter
 
ClusEnsemblePredictionWriter(String, ClusSchema, Settings) - Constructor for class si.ijs.kt.clus.model.processor.ClusEnsemblePredictionWriter
 
ClusEnsembleROSInfo - Class in si.ijs.kt.clus.ext.ensemble.ros
 
ClusEnsembleROSInfo(ClusSchema, ArrayList<int[]>, SettingsEnsemble.EnsembleROSAlgorithmType, SettingsEnsemble.EnsembleROSVotingType, int) - Constructor for class si.ijs.kt.clus.ext.ensemble.ros.ClusEnsembleROSInfo
 
ClusError - Class in si.ijs.kt.clus.error.common
 
ClusError(ClusErrorList) - Constructor for class si.ijs.kt.clus.error.common.ClusError
 
ClusError(ClusErrorList, int) - Constructor for class si.ijs.kt.clus.error.common.ClusError
 
ClusErrorList - Class in si.ijs.kt.clus.error.common
 
ClusErrorList() - Constructor for class si.ijs.kt.clus.error.common.ClusErrorList
 
ClusErrorOutput - Class in si.ijs.kt.clus.error.common
 
ClusErrorOutput(String, ClusSchema, Settings) - Constructor for class si.ijs.kt.clus.error.common.ClusErrorOutput
 
ClusErrorOutput(String, Settings) - Constructor for class si.ijs.kt.clus.error.common.ClusErrorOutput
 
ClusErrorOutput(ClusSchema, Settings) - Constructor for class si.ijs.kt.clus.error.common.ClusErrorOutput
 
ClusException - Exception Class in si.ijs.kt.clus.util.exception
 
ClusException(String) - Constructor for exception class si.ijs.kt.clus.util.exception.ClusException
 
ClusException(String, Object...) - Constructor for exception class si.ijs.kt.clus.util.exception.ClusException
 
ClusExhaustive - Class in si.ijs.kt.clus.ext.exhaustivesearch
 
ClusExhaustive(int) - Constructor for class si.ijs.kt.clus.ext.exhaustivesearch.ClusExhaustive
 
ClusExhaustiveDFSearch - Class in si.ijs.kt.clus.ext.exhaustivesearch
 
ClusExhaustiveDFSearch(Clus) - Constructor for class si.ijs.kt.clus.ext.exhaustivesearch.ClusExhaustiveDFSearch
 
ClusExhaustiveInduce - Class in si.ijs.kt.clus.ext.exhaustivesearch
 
ClusExhaustiveInduce(ClusSchema, Settings, ClusExhaustiveSearch) - Constructor for class si.ijs.kt.clus.ext.exhaustivesearch.ClusExhaustiveInduce
 
ClusExhaustiveSearch - Class in si.ijs.kt.clus.ext.exhaustivesearch
 
ClusExhaustiveSearch(Clus) - Constructor for class si.ijs.kt.clus.ext.exhaustivesearch.ClusExhaustiveSearch
 
ClusFastBeamSearch - Class in si.ijs.kt.clus.ext.beamsearch
 
ClusFastBeamSearch(Clus) - Constructor for class si.ijs.kt.clus.ext.beamsearch.ClusFastBeamSearch
 
ClusFeatureRanking - Class in si.ijs.kt.clus.ext.featureRanking
 
ClusFeatureRanking(Settings) - Constructor for class si.ijs.kt.clus.ext.featureRanking.ClusFeatureRanking
 
ClusForest - Class in si.ijs.kt.clus.ext.ensemble
Ensemble of decision trees.
ClusForest(ClusStatManager) - Constructor for class si.ijs.kt.clus.ext.ensemble.ClusForest
 
ClusForest(ClusStatManager, ClusEnsembleInduceOptimization) - Constructor for class si.ijs.kt.clus.ext.ensemble.ClusForest
 
ClusFormat - Class in si.ijs.kt.clus.util.format
 
ClusFormat() - Constructor for class si.ijs.kt.clus.util.format.ClusFormat
 
ClusHeuristic - Class in si.ijs.kt.clus.heuristic
 
ClusHeuristic(Settings) - Constructor for class si.ijs.kt.clus.heuristic.ClusHeuristic
 
ClusHeuristicImpl - Class in si.ijs.kt.clus.heuristic
 
ClusHeuristicImpl(ClusStatistic, Settings) - Constructor for class si.ijs.kt.clus.heuristic.ClusHeuristicImpl
 
ClusHMTRHierarchy - Class in si.ijs.kt.clus.ext.hierarchicalmtr
Created by Vanja Mileski on 12/15/2016.
ClusHMTRHierarchy() - Constructor for class si.ijs.kt.clus.ext.hierarchicalmtr.ClusHMTRHierarchy
 
ClusHMTRHierarchy(String) - Constructor for class si.ijs.kt.clus.ext.hierarchicalmtr.ClusHMTRHierarchy
 
ClusHMTRNode - Class in si.ijs.kt.clus.ext.hierarchicalmtr
Created by Vanja Mileski on 12/16/2016.
ClusHMTRNode(boolean, String) - Constructor for class si.ijs.kt.clus.ext.hierarchicalmtr.ClusHMTRNode
 
ClusHMTRNode(String) - Constructor for class si.ijs.kt.clus.ext.hierarchicalmtr.ClusHMTRNode
 
ClusInductionAlgorithm - Class in si.ijs.kt.clus.algo
Subclasses should implement: public ClusModel induceSingleUnpruned(ClusRun cr); In addition, subclasses may also want to implement (to return more than one model): public void induceAll(ClusRun cr);
ClusInductionAlgorithm(ClusInductionAlgorithm) - Constructor for class si.ijs.kt.clus.algo.ClusInductionAlgorithm
 
ClusInductionAlgorithm(ClusInductionAlgorithm, ClusStatManager) - Constructor for class si.ijs.kt.clus.algo.ClusInductionAlgorithm
Used in parallelisation.
ClusInductionAlgorithm(ClusSchema, Settings) - Constructor for class si.ijs.kt.clus.algo.ClusInductionAlgorithm
 
ClusInductionAlgorithmType - Class in si.ijs.kt.clus.algo
For each type of algorithm there should be a ClusClassifier object.
ClusInductionAlgorithmType(Clus) - Constructor for class si.ijs.kt.clus.algo.ClusInductionAlgorithmType
 
ClusInvalidSettingsException - Exception Class in si.ijs.kt.clus.util.exception
 
ClusInvalidSettingsException(String) - Constructor for exception class si.ijs.kt.clus.util.exception.ClusInvalidSettingsException
 
ClusInvalidSettingsException(List<String>) - Constructor for exception class si.ijs.kt.clus.util.exception.ClusInvalidSettingsException
 
ClusLearner - Class in si.ijs.kt.clus.addon.sit.mtLearner
 
ClusLearner() - Constructor for class si.ijs.kt.clus.addon.sit.mtLearner.ClusLearner
 
ClusLogger - Class in si.ijs.kt.clus.util
This is the logging class.
ClusLogger() - Constructor for class si.ijs.kt.clus.util.ClusLogger
 
ClusMisc - Class in si.ijs.kt.clus.util
 
ClusMisc() - Constructor for class si.ijs.kt.clus.util.ClusMisc
 
ClusModel - Interface in si.ijs.kt.clus.model
 
ClusModelCollectionIO - Class in si.ijs.kt.clus.model.io
 
ClusModelCollectionIO() - Constructor for class si.ijs.kt.clus.model.io.ClusModelCollectionIO
 
ClusModelInfo - Class in si.ijs.kt.clus.model
 
ClusModelInfo(String) - Constructor for class si.ijs.kt.clus.model.ClusModelInfo
 
ClusModelInfoList - Class in si.ijs.kt.clus.main
 
ClusModelInfoList() - Constructor for class si.ijs.kt.clus.main.ClusModelInfoList
 
ClusModelPredictor - Class in si.ijs.kt.clus.model
 
ClusModelPredictor() - Constructor for class si.ijs.kt.clus.model.ClusModelPredictor
 
ClusModelProcessor - Class in si.ijs.kt.clus.model.processor
 
ClusModelProcessor() - Constructor for class si.ijs.kt.clus.model.processor.ClusModelProcessor
 
ClusNode - Class in si.ijs.kt.clus.algo.tdidt
 
ClusNode() - Constructor for class si.ijs.kt.clus.algo.tdidt.ClusNode
 
ClusNominalError - Class in si.ijs.kt.clus.error.common
 
ClusNominalError(ClusErrorList, int) - Constructor for class si.ijs.kt.clus.error.common.ClusNominalError
 
ClusNominalError(ClusErrorList, NominalAttrType[]) - Constructor for class si.ijs.kt.clus.error.common.ClusNominalError
 
ClusNormalizedAttributeWeights - Class in si.ijs.kt.clus.data.attweights
 
ClusNormalizedAttributeWeights(ClusAttributeWeights) - Constructor for class si.ijs.kt.clus.data.attweights.ClusNormalizedAttributeWeights
 
ClusNumberFormat - Class in si.ijs.kt.clus.util.format
Clus formatter for the numbers that differently formats numbers whose absolute value is at least 1, and the others.
ClusNumberFormat(int) - Constructor for class si.ijs.kt.clus.util.format.ClusNumberFormat
 
ClusNumericError - Class in si.ijs.kt.clus.error.common
 
ClusNumericError(ClusErrorList, int) - Constructor for class si.ijs.kt.clus.error.common.ClusNumericError
 
ClusNumericError(ClusErrorList, NumericAttrType[]) - Constructor for class si.ijs.kt.clus.error.common.ClusNumericError
 
ClusOOBErrorEstimate - Class in si.ijs.kt.clus.ext.ensemble
 
ClusOOBErrorEstimate(ClusStatManager.Mode, Settings) - Constructor for class si.ijs.kt.clus.ext.ensemble.ClusOOBErrorEstimate
 
ClusOOBWeights - Class in si.ijs.kt.clus.ext.ensemble
Class that holds OOB weights.
ClusOOBWeights(SettingsEnsemble.EnsembleVotingType) - Constructor for class si.ijs.kt.clus.ext.ensemble.ClusOOBWeights
 
ClusOptionNode - Class in si.ijs.kt.clus.ext.optiontree
 
ClusOptionNode() - Constructor for class si.ijs.kt.clus.ext.optiontree.ClusOptionNode
 
ClusOptionTree - Class in si.ijs.kt.clus.ext.optiontree
 
ClusOptionTree(Clus) - Constructor for class si.ijs.kt.clus.ext.optiontree.ClusOptionTree
 
ClusOutput - Class in si.ijs.kt.clus.main
Class for outputting the training and testing results to .out file.
ClusOutput(String, ClusSchema, Settings) - Constructor for class si.ijs.kt.clus.main.ClusOutput
 
ClusOutput(ClusSchema, Settings) - Constructor for class si.ijs.kt.clus.main.ClusOutput
 
ClusRandom - Class in si.ijs.kt.clus.util
 
ClusRandom() - Constructor for class si.ijs.kt.clus.util.ClusRandom
 
ClusRandomNonstatic - Class in si.ijs.kt.clus.util
 
ClusRandomNonstatic(int) - Constructor for class si.ijs.kt.clus.util.ClusRandomNonstatic
 
ClusReader - Class in si.ijs.kt.clus.data.io
 
ClusReader(String, Settings) - Constructor for class si.ijs.kt.clus.data.io.ClusReader
 
ClusReadWriteLock - Class in si.ijs.kt.clus.ext.ensemble
 
ClusReadWriteLock() - Constructor for class si.ijs.kt.clus.ext.ensemble.ClusReadWriteLock
 
ClusReliefFeatureRanking - Class in si.ijs.kt.clus.ext.featureRanking.relief
 
ClusReliefFeatureRanking(RowData, int[], int[], boolean, double, int, Settings, SettingsRelief.MissingTargetHandling, double[], ClusRun) - Constructor for class si.ijs.kt.clus.ext.featureRanking.relief.ClusReliefFeatureRanking
Constructor for the ClusReliefFeatureRanking, with the standard parameters of (R)Relief(F).
ClusROSForestInfo - Class in si.ijs.kt.clus.ext.ensemble.ros
 
ClusROSForestInfo(SettingsEnsemble.EnsembleROSAlgorithmType, SettingsEnsemble.EnsembleROSVotingType, int) - Constructor for class si.ijs.kt.clus.ext.ensemble.ros.ClusROSForestInfo
 
ClusROSHelpers - Class in si.ijs.kt.clus.ext.ensemble.ros
 
ClusROSHelpers() - Constructor for class si.ijs.kt.clus.ext.ensemble.ros.ClusROSHelpers
 
ClusROSModelInfo - Class in si.ijs.kt.clus.ext.ensemble.ros
 
ClusROSModelInfo(int, int, HashMap<Integer, Integer>, int) - Constructor for class si.ijs.kt.clus.ext.ensemble.ros.ClusROSModelInfo
 
ClusROSOOBWeights - Class in si.ijs.kt.clus.ext.ensemble.ros
Class that holds OOB weights for ROS ensembles.
ClusROSOOBWeights(SettingsEnsemble.EnsembleVotingType, SettingsEnsemble.EnsembleROSVotingType) - Constructor for class si.ijs.kt.clus.ext.ensemble.ros.ClusROSOOBWeights
 
ClusRule - Class in si.ijs.kt.clus.algo.rules
 
ClusRule(ClusStatManager) - Constructor for class si.ijs.kt.clus.algo.rules.ClusRule
 
ClusRuleClassifier - Class in si.ijs.kt.clus.algo.rules
 
ClusRuleClassifier(Clus) - Constructor for class si.ijs.kt.clus.algo.rules.ClusRuleClassifier
 
ClusRuleConstraintInduce - Class in si.ijs.kt.clus.algo.rules
 
ClusRuleConstraintInduce(ClusSchema, Settings) - Constructor for class si.ijs.kt.clus.algo.rules.ClusRuleConstraintInduce
 
ClusRuleConstraintInduceTest - Class in si.ijs.kt.clus.model.test
 
ClusRuleConstraintInduceTest(ClusAttrType, double, boolean) - Constructor for class si.ijs.kt.clus.model.test.ClusRuleConstraintInduceTest
 
ClusRuleFromTreeInduce - Class in si.ijs.kt.clus.algo.rules
Create rules by decision tree ensemble algorithms (forests).
ClusRuleFromTreeInduce(ClusSchema, Settings, Clus) - Constructor for class si.ijs.kt.clus.algo.rules.ClusRuleFromTreeInduce
 
ClusRuleHelperMethods - Class in si.ijs.kt.clus.algo.rules.probabilistic
 
ClusRuleHelperMethods() - Constructor for class si.ijs.kt.clus.algo.rules.probabilistic.ClusRuleHelperMethods
 
ClusRuleHeuristicDispersion - Class in si.ijs.kt.clus.heuristic.rules
 
ClusRuleHeuristicDispersion(Settings) - Constructor for class si.ijs.kt.clus.heuristic.rules.ClusRuleHeuristicDispersion
 
ClusRuleHeuristicDispersionAdt - Class in si.ijs.kt.clus.heuristic.rules
 
ClusRuleHeuristicDispersionAdt(ClusStatManager, ClusAttributeWeights, Settings) - Constructor for class si.ijs.kt.clus.heuristic.rules.ClusRuleHeuristicDispersionAdt
 
ClusRuleHeuristicDispersionMlt - Class in si.ijs.kt.clus.heuristic.rules
 
ClusRuleHeuristicDispersionMlt(ClusStatManager, ClusAttributeWeights, Settings) - Constructor for class si.ijs.kt.clus.heuristic.rules.ClusRuleHeuristicDispersionMlt
 
ClusRuleHeuristicError - Class in si.ijs.kt.clus.heuristic.rules
 
ClusRuleHeuristicError(ClusStatManager, ClusAttributeWeights, Settings) - Constructor for class si.ijs.kt.clus.heuristic.rules.ClusRuleHeuristicError
 
ClusRuleHeuristicHierarchical - Class in si.ijs.kt.clus.heuristic.hierarchical
 
ClusRuleHeuristicHierarchical(ClusStatManager, ClusAttributeWeights, Settings) - Constructor for class si.ijs.kt.clus.heuristic.hierarchical.ClusRuleHeuristicHierarchical
 
ClusRuleHeuristicMEstimate - Class in si.ijs.kt.clus.heuristic.rules
 
ClusRuleHeuristicMEstimate(double, Settings) - Constructor for class si.ijs.kt.clus.heuristic.rules.ClusRuleHeuristicMEstimate
 
ClusRuleHeuristicRDispersionAdt - Class in si.ijs.kt.clus.heuristic.rules
 
ClusRuleHeuristicRDispersionAdt(ClusStatManager, ClusAttributeWeights, Settings) - Constructor for class si.ijs.kt.clus.heuristic.rules.ClusRuleHeuristicRDispersionAdt
 
ClusRuleHeuristicRDispersionMlt - Class in si.ijs.kt.clus.heuristic.rules
 
ClusRuleHeuristicRDispersionMlt(ClusStatManager, ClusAttributeWeights, Settings) - Constructor for class si.ijs.kt.clus.heuristic.rules.ClusRuleHeuristicRDispersionMlt
 
ClusRuleHeuristicSSD - Class in si.ijs.kt.clus.heuristic.rules
 
ClusRuleHeuristicSSD(ClusStatManager, String, ClusStatistic, ClusAttributeWeights, Settings) - Constructor for class si.ijs.kt.clus.heuristic.rules.ClusRuleHeuristicSSD
 
ClusRuleInduce - Class in si.ijs.kt.clus.algo.rules
 
ClusRuleInduce(ClusSchema, Settings) - Constructor for class si.ijs.kt.clus.algo.rules.ClusRuleInduce
 
ClusRuleLinearTerm - Class in si.ijs.kt.clus.algo.rules
A linear term that has been included in the rule set.
ClusRuleLinearTerm(ClusStatManager, int, int) - Constructor for class si.ijs.kt.clus.algo.rules.ClusRuleLinearTerm
A constructor for creating linear terms.
ClusRuleProbabilisticRuleSetInduce - Class in si.ijs.kt.clus.algo.rules.probabilistic
 
ClusRuleProbabilisticRuleSetInduce(ClusSchema, Settings, Clus) - Constructor for class si.ijs.kt.clus.algo.rules.probabilistic.ClusRuleProbabilisticRuleSetInduce
Constructor
ClusRuleProbabilisticRuleSetInduceOLD - Class in si.ijs.kt.clus.algo.rules.probabilistic
 
ClusRuleProbabilisticRuleSetInduceOLD() - Constructor for class si.ijs.kt.clus.algo.rules.probabilistic.ClusRuleProbabilisticRuleSetInduceOLD
 
ClusRuleProbabilisticRuleSetInduceWeights - Class in si.ijs.kt.clus.algo.rules.probabilistic
Helper class for SLS algorithm weights.
ClusRuleProbabilisticRuleSetInduceWeights() - Constructor for class si.ijs.kt.clus.algo.rules.probabilistic.ClusRuleProbabilisticRuleSetInduceWeights
By Default Accuracy and Size are taken into account with weights 1.0
ClusRuleProbabilisticRuleSetInduceWeights(double[], boolean[]) - Constructor for class si.ijs.kt.clus.algo.rules.probabilistic.ClusRuleProbabilisticRuleSetInduceWeights
Return input weights
ClusRuleSet - Class in si.ijs.kt.clus.algo.rules
Class representing a set of predictive clustering rules.
ClusRuleSet(ClusStatManager) - Constructor for class si.ijs.kt.clus.algo.rules.ClusRuleSet
 
ClusRulesForAttrs - Class in si.ijs.kt.clus.algo.rules
Create one rule for each value of each nominal attribute
ClusRulesForAttrs() - Constructor for class si.ijs.kt.clus.algo.rules.ClusRulesForAttrs
 
ClusRulesFromTree - Class in si.ijs.kt.clus.algo.rules
Rule set created from a tree.
ClusRulesFromTree(boolean, SettingsOutput.ConvertRules) - Constructor for class si.ijs.kt.clus.algo.rules.ClusRulesFromTree
The parameter seems to be always true?
ClusRulesRandom - Class in si.ijs.kt.clus.algo.rules
 
ClusRulesRandom(ClusRun) - Constructor for class si.ijs.kt.clus.algo.rules.ClusRulesRandom
 
ClusRun - Class in si.ijs.kt.clus.main
 
ClusRun(ClusData, ClusSummary) - Constructor for class si.ijs.kt.clus.main.ClusRun
 
ClusRun(ClusRun) - Constructor for class si.ijs.kt.clus.main.ClusRun
 
ClusSchema - Class in si.ijs.kt.clus.data
 
ClusSchema(String) - Constructor for class si.ijs.kt.clus.data.ClusSchema
 
ClusSchema(String, String) - Constructor for class si.ijs.kt.clus.data.ClusSchema
 
ClusSchemaInitializer - Interface in si.ijs.kt.clus.data
 
ClusSelection - Class in si.ijs.kt.clus.selection
 
ClusSelection(int) - Constructor for class si.ijs.kt.clus.selection.ClusSelection
 
ClusSelfTrainingFTFInduce - Class in si.ijs.kt.clus.ext.semisupervised
Self-training that operates without confidence score Implemented on the basis of: Culp and Michailidis, An iterative algorithm for extending learners to a semi-supervised setting, Journal of Computational and Graphical Statistics, 2008
ClusSelfTrainingFTFInduce(ClusSchema, Settings, ClusInductionAlgorithm) - Constructor for class si.ijs.kt.clus.ext.semisupervised.ClusSelfTrainingFTFInduce
 
ClusSelfTrainingInduce - Class in si.ijs.kt.clus.ext.semisupervised
 
ClusSelfTrainingInduce(ClusSchema, Settings, ClusInductionAlgorithm) - Constructor for class si.ijs.kt.clus.ext.semisupervised.ClusSelfTrainingInduce
 
ClusSemiSupervisedClassifier - Class in si.ijs.kt.clus.ext.semisupervised
 
ClusSemiSupervisedClassifier(Clus, ClusInductionAlgorithmType) - Constructor for class si.ijs.kt.clus.ext.semisupervised.ClusSemiSupervisedClassifier
 
ClusSemiSupervisedInduce - Class in si.ijs.kt.clus.ext.semisupervised
 
ClusSemiSupervisedInduce(ClusInductionAlgorithm) - Constructor for class si.ijs.kt.clus.ext.semisupervised.ClusSemiSupervisedInduce
 
ClusSemiSupervisedInduce(ClusSchema, Settings) - Constructor for class si.ijs.kt.clus.ext.semisupervised.ClusSemiSupervisedInduce
 
ClusSemiSupervisedPCTs - Class in si.ijs.kt.clus.ext.semisupervised
 
ClusSemiSupervisedPCTs(ClusInductionAlgorithm) - Constructor for class si.ijs.kt.clus.ext.semisupervised.ClusSemiSupervisedPCTs
 
ClusSerializable - Class in si.ijs.kt.clus.util.io
 
ClusSerializable() - Constructor for class si.ijs.kt.clus.util.io.ClusSerializable
 
ClusSetError - Class in si.ijs.kt.clus.error.common
 
ClusSetError(ClusErrorList, int) - Constructor for class si.ijs.kt.clus.error.common.ClusSetError
 
ClusSetError(ClusErrorList, SetAttrType[]) - Constructor for class si.ijs.kt.clus.error.common.ClusSetError
 
ClusShowModelInfo - Class in si.ijs.kt.clus.util.tools
 
ClusShowModelInfo() - Constructor for class si.ijs.kt.clus.util.tools.ClusShowModelInfo
 
ClusSITDecisionTree - Class in si.ijs.kt.clus.algo.tdidt
 
ClusSITDecisionTree(ClusInductionAlgorithmType) - Constructor for class si.ijs.kt.clus.algo.tdidt.ClusSITDecisionTree
 
ClusSplitNode - Class in si.ijs.kt.clus.ext.optiontree
 
ClusSplitNode() - Constructor for class si.ijs.kt.clus.ext.optiontree.ClusSplitNode
 
ClusStat - Class in si.ijs.kt.clus.main
 
ClusStat() - Constructor for class si.ijs.kt.clus.main.ClusStat
 
ClusStatistic - Class in si.ijs.kt.clus.statistic
Statistics about the data set.
ClusStatistic(Settings) - Constructor for class si.ijs.kt.clus.statistic.ClusStatistic
 
ClusStatManager - Class in si.ijs.kt.clus.main
Statistics manager Includes information about target attributes and weights etc.
ClusStatManager(ClusSchema, Settings) - Constructor for class si.ijs.kt.clus.main.ClusStatManager
 
ClusStatManager(ClusSchema, Settings, boolean) - Constructor for class si.ijs.kt.clus.main.ClusStatManager
 
ClusStatManager.Mode - Enum Class in si.ijs.kt.clus.main
 
ClusStatManager.TargetType - Enum Class in si.ijs.kt.clus.main
 
ClusStopCriterion - Interface in si.ijs.kt.clus.heuristic.stopCriterion
 
ClusStopCriterionMinNbExamples - Class in si.ijs.kt.clus.heuristic.stopCriterion
 
ClusStopCriterionMinNbExamples(int) - Constructor for class si.ijs.kt.clus.heuristic.stopCriterion.ClusStopCriterionMinNbExamples
 
ClusStopCriterionMinWeight - Class in si.ijs.kt.clus.heuristic.stopCriterion
 
ClusStopCriterionMinWeight(double) - Constructor for class si.ijs.kt.clus.heuristic.stopCriterion.ClusStopCriterionMinWeight
 
ClusStructuredDistance - Class in si.ijs.kt.clus.distance.complex
 
ClusStructuredDistance() - Constructor for class si.ijs.kt.clus.distance.complex.ClusStructuredDistance
 
ClusSumError - Class in si.ijs.kt.clus.error
 
ClusSumError(ClusErrorList) - Constructor for class si.ijs.kt.clus.error.ClusSumError
 
ClusSummary - Class in si.ijs.kt.clus.main
 
ClusSummary() - Constructor for class si.ijs.kt.clus.main.ClusSummary
 
Clustering - Enum constant in enum class si.ijs.kt.clus.data.type.ClusAttrType.AttributeUseType
 
Clustering - Enum constant in enum class si.ijs.kt.clus.main.settings.section.SettingsEnsemble.RandomAttributeTypeSelection
 
ClusterNoTarget - Enum constant in enum class si.ijs.kt.clus.data.type.ClusAttrType.Status
 
clusterWeighted(DataTuple) - Method in class si.ijs.kt.clus.algo.tdidt.ClusNode
 
ClusTreeReader - Class in si.ijs.kt.clus.model.io
 
ClusTreeReader() - Constructor for class si.ijs.kt.clus.model.io.ClusTreeReader
 
ClusUtil - Class in si.ijs.kt.clus.util
 
ClusUtil() - Constructor for class si.ijs.kt.clus.util.ClusUtil
 
ClusView - Class in si.ijs.kt.clus.data.io
 
ClusView() - Constructor for class si.ijs.kt.clus.data.io.ClusView
 
cmbPath(String, String) - Static method in class si.ijs.kt.clus.util.jeans.util.FileUtil
 
CMDLineArgs - Class in si.ijs.kt.clus.util.jeans.util.cmdline
 
CMDLineArgs(CMDLineArgsProvider) - Constructor for class si.ijs.kt.clus.util.jeans.util.cmdline.CMDLineArgs
 
CMDLineArgsProvider - Interface in si.ijs.kt.clus.util.jeans.util.cmdline
 
collectAttributes(ClusAttrType.AttributeUseType, ClusAttrType.AttributeType) - Method in class si.ijs.kt.clus.data.ClusSchema
 
COLS - Static variable in class si.ijs.kt.clus.data.ClusSchema
 
ColTarget - Class in si.ijs.kt.clus.data.cols
 
ColTarget(ClusSchema) - Constructor for class si.ijs.kt.clus.data.cols.ColTarget
 
combineAllFoldRuns(ClusInductionAlgorithmType) - Method in class si.ijs.kt.clus.Clus
 
combineTrainAndValidSets() - Method in class si.ijs.kt.clus.main.ClusRun
 
CombStat - Class in si.ijs.kt.clus.statistic
 
CombStat(ClusStatManager, NumericAttrType[], NominalAttrType[]) - Constructor for class si.ijs.kt.clus.statistic.CombStat
Constructor for this class.
CombStat(ClusStatManager, RegressionStat, ClassificationStat) - Constructor for class si.ijs.kt.clus.statistic.CombStat
 
CombStatClassRegHier - Class in si.ijs.kt.clus.statistic
 
CombStatClassRegHier(ClusStatManager, NumericAttrType[], NominalAttrType[], WHTDStatistic) - Constructor for class si.ijs.kt.clus.statistic.CombStatClassRegHier
 
CombStatClassRegHier(ClusStatManager, RegressionStat, ClassificationStat, WHTDStatistic) - Constructor for class si.ijs.kt.clus.statistic.CombStatClassRegHier
Constructor for this class.
commentchar - Variable in class si.ijs.kt.clus.util.jeans.util.MStreamTokenizer
 
commentchar - Variable in class si.ijs.kt.clus.util.jeans.util.MTokenizer
 
commonPrintForRuleTypes(PrintWriter, StatisticPrintInfo) - Method in class si.ijs.kt.clus.algo.rules.ClusRule
Print for also nonregular rules
compare(int, int) - Method in class si.ijs.kt.clus.data.rows.RowData
 
compare(Object, Object) - Method in class si.ijs.kt.clus.util.jeans.util.array.MDoubleArrayComparator
 
compare(Object, Object) - Method in interface si.ijs.kt.clus.util.jeans.util.sort.MComparator
 
compare(Object, Object) - Method in class si.ijs.kt.clus.util.jeans.util.sort.MStringSorter
 
compare(TestAndHeuristic, TestAndHeuristic) - Method in class si.ijs.kt.clus.ext.optiontree.FindBestTests.HeuristicComparator
 
compareObjects(Vector, int, int, MComparator) - Static method in class si.ijs.kt.clus.util.jeans.util.sort.MVectorSorter
 
compareTo(Object) - Method in class si.ijs.kt.clus.ext.beamsearch.ClusBeamModel
 
compareTo(Object) - Method in class si.ijs.kt.clus.ext.semisupervised.utils.DoublesPair
 
compareTo(Object) - Method in class si.ijs.kt.clus.ext.semisupervised.utils.IndiceValuePair
 
compareTo(Object) - Method in class si.ijs.kt.clus.util.jeans.util.compound.DoubleBoolean
Comparing function that is used for sorting the objects of the type DoubleBooleanCount.
compareTo(Object) - Method in class si.ijs.kt.clus.util.jeans.util.compound.DoubleObject
 
compareTo(Object) - Method in class si.ijs.kt.clus.util.jeans.util.compound.IntObject
 
compareTo(ClusAttrType) - Method in class si.ijs.kt.clus.data.type.ClusAttrType
Compares to ClusAttrTypes based on index, allowing them to be sorted.
compareTo(ClassTerm) - Method in class si.ijs.kt.clus.ext.hierarchical.ClassTerm
 
compareValue(DataTuple, DataTuple) - Method in class si.ijs.kt.clus.data.type.ClusAttrType
 
compareValue(DataTuple, DataTuple) - Method in class si.ijs.kt.clus.data.type.primitive.IntegerAttrType
 
compareValue(DataTuple, DataTuple) - Method in class si.ijs.kt.clus.data.type.primitive.NominalAttrType
 
compareValue(DataTuple, DataTuple) - Method in class si.ijs.kt.clus.data.type.primitive.NumericAttrType
 
compareValue(DataTuple, DataTuple) - Method in class si.ijs.kt.clus.data.type.primitive.StringAttrType
 
compatibility(ROCAndPRCurve[], ROCAndPRCurve) - Method in class si.ijs.kt.clus.error.hmlc.HierErrorMeasures
 
CompleteTreeIterator - Class in si.ijs.kt.clus.util.jeans.tree
 
CompleteTreeIterator(Node) - Constructor for class si.ijs.kt.clus.util.jeans.tree.CompleteTreeIterator
 
ComponentError - Interface in si.ijs.kt.clus.error.common
 
ComponentStatistic - Interface in si.ijs.kt.clus.statistic
 
compute() - Method in class si.ijs.kt.clus.ext.ilevelc.DerivedConstraintsComputer
 
compute(RowData) - Method in class si.ijs.kt.clus.error.CorrelationMatrixComputer
 
compute(RowData, ClusModel) - Method in class si.ijs.kt.clus.error.common.ClusError
 
compute(RowData, ClusModel) - Method in class si.ijs.kt.clus.error.common.ClusErrorList
 
compute(RowData, ClusModel) - Method in class si.ijs.kt.clus.error.ICVPairwiseDistancesError
 
compute(RowData, ClusModel) - Method in class si.ijs.kt.clus.ext.timeseries.TimeSeriesSignificantChangeTesterXVAL
 
compute(RowData, ClusModelInfo) - Method in class si.ijs.kt.clus.error.common.ClusErrorList
 
computeAll() - Method in class si.ijs.kt.clus.error.hmlc.HierErrorMeasures
 
computeAll() - Method in class si.ijs.kt.clus.error.mlc.MLROCAndPRCurve
 
computeAll() - Method in class si.ijs.kt.clus.error.mlcForHmlc.MlcMeasuresForHmlc
 
computeAll() - Method in class si.ijs.kt.clus.error.mlcForHmlc.MLROCAndPRCurve
 
computeArea(ArrayList<double[]>) - Method in class si.ijs.kt.clus.error.ROCAndPRCurve
 
computeArea(ArrayList<double[]>) - Static method in class si.ijs.kt.clus.statistic.WHTDStatistic
Computes the area under the (pooled) curve.
computeAverageLoss(RowData, double[]) - Method in class si.ijs.kt.clus.ext.ensemble.ClusBoostingInduce
 
computeCHeurStat(ClusNode, ClusNode, int[], int[]) - Method in class si.ijs.kt.clus.ext.ilevelc.ILevelCInduce
 
computeClosure() - Method in class si.ijs.kt.clus.addon.ILevelC.ilevelc.ILevelCGUI.ILevelCComponent
 
computeClusteringErrorStandard(ClusNode, RowData, ClusError) - Static method in class si.ijs.kt.clus.pruning.TreeErrorComputer
 
computeClusteringErrorStandard(ClusNode, RowData, ClusErrorList) - Static method in class si.ijs.kt.clus.pruning.TreeErrorComputer
 
computeCosts(ClusNode, int) - Method in class si.ijs.kt.clus.pruning.SizeConstraintPruning
 
computeCostUsingConstraints(ClusNode, int) - Static method in class si.ijs.kt.clus.ext.beamsearch.ClusBeamSizeConstraints
 
computeCovariancesIfNeeded(int) - Method in class si.ijs.kt.clus.util.tools.optimization.gd.GDProblem
Compute the needed covariances for the weight.
computeCoverageBits(RowData) - Method in class si.ijs.kt.clus.algo.rules.ClusRule
Compute a bit vector of covered examples
computeCovered(RowData) - Method in class si.ijs.kt.clus.algo.rules.ClusRule
 
computeCoverStat(RowData, ClusStatistic) - Method in class si.ijs.kt.clus.algo.rules.ClusRule
 
computeCurves() - Method in class si.ijs.kt.clus.error.ROCAndPRCurve
 
computed - Variable in class si.ijs.kt.clus.ext.beamsearch.ClusBeamSizeConstraintInfo
 
computed - Variable in class si.ijs.kt.clus.pruning.SizeConstraintVisitor
 
computeDispersion() - Method in class si.ijs.kt.clus.main.settings.section.SettingsRules
 
computeDispersion(int) - Method in class si.ijs.kt.clus.algo.rules.ClusRule
Computes the dispersion of data tuples covered by this rule.
computeDispersion(int) - Method in class si.ijs.kt.clus.algo.rules.ClusRuleSet
Computes the dispersion of data tuples covered by each rule.
computeDist() - Method in class si.ijs.kt.clus.distance.primitive.relief.Levenshtein
Dynamically computes distance between the strings m_str1 and m_str2 and needs only O( m_len1 + m_len2) space.
computeDistance(DataTuple) - Method in class si.ijs.kt.clus.ext.ilevelc.COPKMeansCluster
 
computeDistance(DataTuple, DataTuple, int) - Method in class si.ijs.kt.clus.ext.featureRanking.relief.ClusReliefFeatureRanking
Distance between tuples in the subspace space.
computeDistance1D(DataTuple, DataTuple, ClusAttrType) - Method in class si.ijs.kt.clus.ext.featureRanking.relief.ClusReliefFeatureRanking
Calculates the distance between to tuples in a given component attr.
computeError(RowData, TimeSeries) - Method in class si.ijs.kt.clus.ext.timeseries.TimeSeriesSignificantChangeTesterXVAL
 
computeErrorList(ClusSchema, ClusStatManager) - Method in class si.ijs.kt.clus.ext.featureRanking.ClusFeatureRanking
 
computeErrorNode(ClusNode, RowData, ClusError) - Static method in class si.ijs.kt.clus.pruning.TreeErrorComputer
 
computeErrorOptimized(ClusNode, RowData, ClusErrorList, boolean) - Static method in class si.ijs.kt.clus.pruning.TreeErrorComputer
 
computeErrorOptimized(ClusNode, RowData, ClusError, boolean) - Static method in class si.ijs.kt.clus.pruning.TreeErrorComputer
 
computeErrorScore(RowData) - Method in class si.ijs.kt.clus.algo.rules.ClusRuleSet
Computes the error score of the rule set.
computeErrorSimple(ClusNode, ClusError) - Static method in class si.ijs.kt.clus.pruning.TreeErrorComputer
 
computeErrorStandard(ClusNode, int, ClusRun) - Method in class si.ijs.kt.clus.algo.tdidt.tune.CDTuneSizeConstrPruning
 
computeErrorStandard(ClusNode, RowData, ClusError) - Static method in class si.ijs.kt.clus.pruning.TreeErrorComputer
 
computeFinalScores(int) - Method in class si.ijs.kt.clus.ext.featureRanking.ClusFeatureRanking
Normalizes the feature importance scores.
computeForRule(ClusRule, ClusSchema) - Method in class si.ijs.kt.clus.error.ICVPairwiseDistancesError
 
computeForRule(ClusRule, ClusSchema) - Method in class si.ijs.kt.clus.ext.timeseries.TimeSeriesSignificantChangeTesterXVAL
 
computeForRuleSet(ClusRuleSet, ClusSchema) - Method in class si.ijs.kt.clus.error.ICVPairwiseDistancesError
 
computeGlobalHeuristic(NodeTest, RowData, CurrentBestTestAndHeuristic) - Method in class si.ijs.kt.clus.ext.beamsearch.ClusFastBeamSearch
 
computeHeuristic(int, double) - Method in class si.ijs.kt.clus.ext.ilevelc.ILevelCInduce
 
computeHeuristic(ILevelCHeurStat, ILevelCHeurStat, ILevelCStatistic, boolean, double, int) - Method in class si.ijs.kt.clus.ext.ilevelc.ILevelCInduce
 
computeHierarchicalDist1D(DataTuple, DataTuple, ClassesAttrType) - Method in class si.ijs.kt.clus.ext.featureRanking.relief.ClusReliefFeatureRanking
Calculates the distance between hierarchical sets of labels of data tuples t1 and t2.
computeICVPairwiseDistances(ClusDistance, RowData) - Static method in class si.ijs.kt.clus.error.ICVPairwiseDistancesError
 
computeImportances(int, int, int, boolean, double[]) - Method in class si.ijs.kt.clus.ext.featureRanking.relief.statistics.Classic
 
computeImportances(int, int, int, boolean, double[]) - Method in class si.ijs.kt.clus.ext.featureRanking.relief.statistics.DistanceSimplified
 
computeImportances(int, int, int, boolean, double[]) - Method in class si.ijs.kt.clus.ext.featureRanking.relief.statistics.Statistics
 
computeImportances(int, int, int, boolean, double[]) - Method in class si.ijs.kt.clus.ext.featureRanking.relief.statistics.Steepness
 
computeImportances(int, int, int, boolean, double[]) - Method in class si.ijs.kt.clus.ext.featureRanking.relief.statistics.Variance
 
computeLeafAdd(ClusNode) - Method in class si.ijs.kt.clus.ext.beamsearch.ClusBeamHeuristic
 
computeLeafAdd(ClusNode) - Method in class si.ijs.kt.clus.ext.beamsearch.ClusBeamHeuristicError
 
computeLeafAdd(ClusNode) - Method in class si.ijs.kt.clus.ext.beamsearch.ClusBeamHeuristicMEstimate
 
computeLeafAdd(ClusNode) - Method in class si.ijs.kt.clus.ext.beamsearch.ClusBeamHeuristicMorishita
 
computeLeafAdd(ClusNode) - Method in class si.ijs.kt.clus.ext.beamsearch.ClusBeamHeuristicSS
 
computeLeafAdd(ClusNode) - Method in class si.ijs.kt.clus.ext.beamsearch.ClusBeamSearch
 
computeLeafAdd(ClusNode) - Method in class si.ijs.kt.clus.ext.exhaustivesearch.ClusExhaustiveSearch
 
computeLeafError(ClusStatistic) - Method in class si.ijs.kt.clus.error.ClusSumError
 
computeLeafError(ClusStatistic) - Method in class si.ijs.kt.clus.error.common.ClusError
 
computeLeafError(ClusStatistic) - Method in class si.ijs.kt.clus.error.MisclassificationError
 
computeLeafError(ClusStatistic) - Method in class si.ijs.kt.clus.error.MSError
 
computeLeafError(ClusStatistic) - Method in class si.ijs.kt.clus.error.MSNominalError
 
computeLeafError(ClusStatistic) - Method in class si.ijs.kt.clus.error.sets.Accuracy
 
computeLeafError(ClusStatistic) - Method in class si.ijs.kt.clus.error.sets.F1Score
 
computeLeafError(ClusStatistic) - Method in class si.ijs.kt.clus.error.sets.HammingLossError
 
computeLeafError(ClusStatistic) - Method in class si.ijs.kt.clus.error.sets.Precision
 
computeLeafError(ClusStatistic) - Method in class si.ijs.kt.clus.error.sets.Recall
 
computeLeafError(ClusStatistic) - Method in class si.ijs.kt.clus.error.sets.SubsetAccuracy
 
computeLowerBound(ClusStatistic, int) - Static method in class si.ijs.kt.clus.ext.beamsearch.ClusBeamSizeConstraints
 
computeMeanTuple() - Method in class si.ijs.kt.clus.statistic.WHTDStatistic
 
computeMeanValue(TimeSeriesAttrType, RowData) - Method in class si.ijs.kt.clus.ext.timeseries.TimeSeriesSignificantChangeTesterXVAL
 
computeMinimumExtViolated(int, int, boolean) - Method in class si.ijs.kt.clus.ext.ilevelc.ILevelCHeurStat
 
computeMinValue() - Method in class si.ijs.kt.clus.ext.beamsearch.ClusBeam
 
computeMorishitaStat(ClusStatistic, ClusStatistic) - Method in class si.ijs.kt.clus.ext.beamsearch.ClusBeamHeuristicMorishita
 
computeNodeCost(ClusNode) - Method in class si.ijs.kt.clus.pruning.SizeConstraintPruning
 
computeNodesLeavesDepth() - Method in class si.ijs.kt.clus.algo.tdidt.ClusNode
 
computeNom(RowData) - Method in class si.ijs.kt.clus.error.CorrelationMatrixComputer
 
computeNominalDist1D(DataTuple, DataTuple, NominalAttrType) - Method in class si.ijs.kt.clus.ext.featureRanking.relief.ClusReliefFeatureRanking
Calculates distance between the nominal values of the component attr.
computeNormalizedLoss(RowData, ClusNode) - Method in class si.ijs.kt.clus.ext.ensemble.ClusBoostingInduce
 
computeNRecursive(ClusNode) - Method in class si.ijs.kt.clus.ext.hierarchical.HierRemoveInsigClasses
 
computeNum(RowData) - Method in class si.ijs.kt.clus.error.CorrelationMatrixComputer
 
computeNumericDist1D(DataTuple, DataTuple, NumericAttrType, double) - Method in class si.ijs.kt.clus.ext.featureRanking.relief.ClusReliefFeatureRanking
Calculates distance between the numeric values of the component attr.
computePrecision(double) - Method in class si.ijs.kt.clus.error.ROCAndPRCurve
 
computePrecisions(double[]) - Method in class si.ijs.kt.clus.error.ROCAndPRCurve
 
computePrediction() - Method in class si.ijs.kt.clus.algo.rules.ClusRule
Computes predictions for the rule by taking the mean of covered examples.
computePrediction() - Method in class si.ijs.kt.clus.algo.tdidt.ClusNode
 
computePrediction() - Method in class si.ijs.kt.clus.statistic.ClusStatistic
 
computePrediction() - Method in class si.ijs.kt.clus.statistic.RegressionStatBase
 
computePrediction() - Method in class si.ijs.kt.clus.statistic.WHTDStatistic
 
computePrintTuple() - Method in class si.ijs.kt.clus.statistic.WHTDStatistic
 
computeRandIndex() - Method in class si.ijs.kt.clus.ext.ilevelc.ILevelCRandIndex
 
computeRandIndex(int[]) - Method in class si.ijs.kt.clus.ext.ilevelc.COPKMeans
 
computeRandIndex(RowData, int[], String) - Method in class si.ijs.kt.clus.ext.ilevelc.MPCKMeansWrapper
 
computeRecursive(ClusNode, RowData) - Method in class si.ijs.kt.clus.error.ICVPairwiseDistancesError
 
computeRecursive(ClassTerm, ClassHierarchy, RowData, RowData, RowData, boolean[]) - Method in class si.ijs.kt.clus.addon.hmc.HMCNodeWiseModels.hmcnwmodels.HMCNodeWiseModels
 
computeRecursiveRoot(ClassTerm, ClassHierarchy, RowData, RowData, RowData, boolean[]) - Method in class si.ijs.kt.clus.addon.hmc.HMCNodeWiseModels.hmcnwmodels.HMCNodeWiseModels
 
computeReliefImportance(RowData) - Method in class si.ijs.kt.clus.ext.featureRanking.relief.ClusReliefFeatureRanking
Calculates the feature importances for a given dataset.
computeSignificantChangePValueXVAL(RowData) - Method in class si.ijs.kt.clus.ext.timeseries.TimeSeriesSignificantChangeTesterXVAL
 
computeSplitInfo(double, double, double) - Static method in class si.ijs.kt.clus.statistic.ClassificationStat
 
computeStats() - Method in class si.ijs.kt.clus.addon.hmc.HMCAverageSingleClass.HMCAverageSingleClass
 
computeStringDist1D(DataTuple, DataTuple, StringAttrType) - Method in class si.ijs.kt.clus.ext.featureRanking.relief.ClusReliefFeatureRanking
Computes Levenshtein's distance between the string values of the component attr.
computeTestStatistics(ClusRun[], int, ClusError) - Method in class si.ijs.kt.clus.algo.tdidt.tune.CDTuneSizeConstrPruning
 
computeTimeSeriesDist1D(DataTuple, DataTuple, TimeSeriesAttrType) - Method in class si.ijs.kt.clus.ext.featureRanking.relief.ClusReliefFeatureRanking
Computes distance between the time series values of the component attr.
computeTotal() - Method in class si.ijs.kt.clus.util.jeans.util.IntervalCollection
 
computeTrainSetStat(RowData) - Method in class si.ijs.kt.clus.main.ClusStatManager
 
computeTrainSetStat(RowData, ClusAttrType.AttributeUseType) - Method in class si.ijs.kt.clus.main.ClusStatManager
 
computeTreeError(ClusRun[], SizeConstraintPruning[], int, ClusSummary, int) - Method in class si.ijs.kt.clus.algo.tdidt.tune.CDTuneSizeConstrPruning
 
computeTreeErrorClusteringAbsolute(ClusNode) - Method in class si.ijs.kt.clus.error.common.ClusError
 
computeVariance() - Method in class si.ijs.kt.clus.ext.ilevelc.COPKMeans
 
computeWeights() - Method in class si.ijs.kt.clus.ext.featureRanking.relief.ReliefModel
 
computeZScore() - Method in class si.ijs.kt.clus.pruning.C45Pruner
 
concatarraysorted(double[], double[]) - Static method in class si.ijs.kt.clus.ext.exhaustivesearch.ClusExhaustiveSearch
 
considerImmutable(Class<?>) - Method in class si.ijs.kt.clus.util.cloner.Cloner
override this to decide if a class is immutable.
considerUnlableInstancesInIGCalc() - Method in class si.ijs.kt.clus.main.settings.section.SettingsTree
 
Constant - Enum constant in enum class si.ijs.kt.clus.main.settings.section.SettingsKNN.DistanceWeights
 
ConstraintDFInduce - Class in si.ijs.kt.clus.algo.tdidt
 
ConstraintDFInduce(ClusInductionAlgorithm) - Constructor for class si.ijs.kt.clus.algo.tdidt.ConstraintDFInduce
 
ConstraintDFInduce(ClusSchema, Settings, boolean) - Constructor for class si.ijs.kt.clus.algo.tdidt.ConstraintDFInduce
 
constructComplDistVector(int[], int[]) - Method in class si.ijs.kt.clus.heuristic.GeneticDistanceHeuristicMatrix
 
constructComplIndexVector(RowData, int[]) - Method in class si.ijs.kt.clus.heuristic.GeneticDistanceHeuristic
 
constructIndexVector(RowData) - Method in class si.ijs.kt.clus.heuristic.GeneticDistanceHeuristic
 
constructIndexVector(RowData) - Method in class si.ijs.kt.clus.heuristic.GISHeuristic
 
constructIndexVector(RowData, ClusStatistic) - Method in class si.ijs.kt.clus.heuristic.GeneticDistanceHeuristic
 
constructIndexVector(RowData, ClusStatistic) - Method in class si.ijs.kt.clus.heuristic.GISHeuristic
 
constructMatrix(ClusStatistic) - Method in class si.ijs.kt.clus.heuristic.GeneticDistanceHeuristicMatrix
 
constructOptionRules(MyNode, ClusStatManager) - Method in class si.ijs.kt.clus.algo.rules.ClusRulesFromTree
Option tree conversion
constructOptionRules(ClusRun, MyNode, ClusStatManager, boolean, SettingsRules.RulePredictionMethod) - Method in class si.ijs.kt.clus.algo.rules.ClusRulesFromTree
 
constructRandomly(ClusRuleSet, RowData) - Method in class si.ijs.kt.clus.algo.rules.ClusRulesRandom
 
constructRecursive(ClusNode, ClusRule, ClusRuleSet) - Method in class si.ijs.kt.clus.algo.rules.ClusRulesFromTree
Only terminal nodes are added to rule set
constructRecursiveOption(MyNode, ClusRule, ClusRuleSet) - Method in class si.ijs.kt.clus.algo.rules.ClusRulesFromTree
Only terminal nodes are added to rule set (OPTION TREE)
constructRules(ClusNode, ClusStatManager) - Method in class si.ijs.kt.clus.algo.rules.ClusRulesFromTree
Construct rules from terminal nodes of the given tree.
constructRules(ClusRun) - Method in class si.ijs.kt.clus.algo.rules.ClusRulesForAttrs
 
constructRules(ClusRun) - Method in class si.ijs.kt.clus.algo.rules.ClusRulesRandom
Constructs the random rules.
constructRules(ClusRun, ClusNode, ClusStatManager, boolean, SettingsRules.RulePredictionMethod) - Method in class si.ijs.kt.clus.algo.rules.ClusRulesFromTree
Same as constructRules(ClusNode node, ClusStatManager mgr) but with additional parameter - ClusRun to get access to the data set.
contains(int) - Method in class si.ijs.kt.clus.ext.optxval.OptXValSplit
 
contains(int) - Method in class si.ijs.kt.clus.util.jeans.io.ini.INIFileNominal
 
containsFold(DataTuple, int[]) - Method in class si.ijs.kt.clus.data.rows.RowData
 
containsOOBForTuple(DataTuple) - Method in class si.ijs.kt.clus.ext.ensemble.ClusForest
 
containsPredictionForTuple(DataTuple) - Static method in class si.ijs.kt.clus.ext.ensemble.ClusOOBErrorEstimate
 
ContingencyTable - Class in si.ijs.kt.clus.error
 
ContingencyTable(ClusErrorList, NominalAttrType[]) - Constructor for class si.ijs.kt.clus.error.ContingencyTable
 
ContingencyTable(ClusErrorList, NominalAttrType[], String) - Constructor for class si.ijs.kt.clus.error.ContingencyTable
 
CONTROL - Static variable in class si.ijs.kt.clus.util.jeans.util.MSStringTokenizer
 
convert(String, String, boolean, boolean) - Method in class si.ijs.kt.clus.addon.hmc.HMCConvertToSC.HMCConvertToSC
 
convert(String, String, double) - Method in class si.ijs.kt.clus.addon.hmc.HMCConvertDAGData.HMCConvertDAGData
 
convertTo(MNumber) - Method in class si.ijs.kt.clus.util.jeans.math.MDouble
 
convertTo(MNumber) - Method in class si.ijs.kt.clus.util.jeans.math.MNumber
 
convertToPlainLinearTerms() - Method in class si.ijs.kt.clus.algo.rules.ClusRuleSet
Update rule sets so, that the offset and scaling factors of linear terms are included In the weights.
convertToPlainTerm(double[], double) - Method in class si.ijs.kt.clus.algo.rules.ClusRuleLinearTerm
 
convertToRules(ClusRun, boolean) - Method in class si.ijs.kt.clus.ext.ensemble.ClusForest
Converts the forest to rule set and adds the model.
convertToRules(ClusRun, ClusModelInfo) - Method in class si.ijs.kt.clus.algo.tdidt.ClusDecisionTree
Convert the tree to rules
convertTree(Object) - Static method in class si.ijs.kt.clus.ext.optxval.OptXValBinTree
 
convertTree(MyArray) - Static method in class si.ijs.kt.clus.ext.optxval.OptXValBinTree
 
COPKMeans - Class in si.ijs.kt.clus.ext.ilevelc
 
COPKMeans(int, ClusStatManager) - Constructor for class si.ijs.kt.clus.ext.ilevelc.COPKMeans
 
COPKMeansCluster - Class in si.ijs.kt.clus.ext.ilevelc
 
COPKMeansCluster(DataTuple, ClusStatManager) - Constructor for class si.ijs.kt.clus.ext.ilevelc.COPKMeansCluster
 
COPKMeansModel - Class in si.ijs.kt.clus.ext.ilevelc
 
COPKMeansModel() - Constructor for class si.ijs.kt.clus.ext.ilevelc.COPKMeansModel
 
copy(ClusStatistic) - Method in class si.ijs.kt.clus.error.common.multiscore.MultiScoreStat
 
copy(ClusStatistic) - Method in class si.ijs.kt.clus.ext.beamsearch.ClusBeamSimClassStat
 
copy(ClusStatistic) - Method in class si.ijs.kt.clus.ext.beamsearch.ClusBeamSimRegrStat
 
copy(ClusStatistic) - Method in class si.ijs.kt.clus.ext.structuredTypes.SetStatistic
 
copy(ClusStatistic) - Method in class si.ijs.kt.clus.ext.structuredTypes.TupleStatistic
 
copy(ClusStatistic) - Method in class si.ijs.kt.clus.ext.timeseries.TimeSeriesStat
 
copy(ClusStatistic) - Method in class si.ijs.kt.clus.statistic.BitVectorStat
 
copy(ClusStatistic) - Method in class si.ijs.kt.clus.statistic.ClassificationStat
 
copy(ClusStatistic) - Method in class si.ijs.kt.clus.statistic.ClusStatistic
 
copy(ClusStatistic) - Method in class si.ijs.kt.clus.statistic.CombStat
 
copy(ClusStatistic) - Method in class si.ijs.kt.clus.statistic.CombStatClassRegHier
 
copy(ClusStatistic) - Method in class si.ijs.kt.clus.statistic.GeneticDistanceStat
 
copy(ClusStatistic) - Method in class si.ijs.kt.clus.statistic.GISStat
Deprecated.
 
copy(ClusStatistic) - Method in class si.ijs.kt.clus.statistic.HierSumPairwiseDistancesStat
 
copy(ClusStatistic) - Method in class si.ijs.kt.clus.statistic.RegressionStat
 
copy(ClusStatistic) - Method in class si.ijs.kt.clus.statistic.RegressionStatBinaryNomiss
 
copy(ClusStatistic) - Method in class si.ijs.kt.clus.statistic.SumPairwiseDistancesStat
 
copy(ClusStatistic) - Method in class si.ijs.kt.clus.statistic.WHTDStatistic
 
copy(BitList) - Method in class si.ijs.kt.clus.util.jeans.list.BitList
 
copy(DEIndividual) - Method in class si.ijs.kt.clus.util.tools.optimization.de.DEIndividual
 
copyActual(BinaryPredictionList) - Method in class si.ijs.kt.clus.error.BinaryPredictionList
 
copyAll(ClusStatistic) - Method in class si.ijs.kt.clus.statistic.WHTDStatistic
 
copyAllModelsMIs() - Method in class si.ijs.kt.clus.main.ClusModelInfoList
 
copyAndSubtractFromThis(ClusStatistic, ClusStatistic) - Method in class si.ijs.kt.clus.statistic.GeneticDistanceStat
 
copyAndSubtractFromThis(BitList, BitList) - Method in class si.ijs.kt.clus.util.jeans.list.BitList
 
copyArrayIndex(ClusAttrType) - Method in class si.ijs.kt.clus.data.type.BitwiseNominalAttrType
 
copyArrayIndex(ClusAttrType) - Method in class si.ijs.kt.clus.data.type.ClusAttrType
 
copyFrom(ClusAttributeWeights) - Method in class si.ijs.kt.clus.data.attweights.ClusAttributeWeights
 
copyFrom(IntervalCollection) - Method in class si.ijs.kt.clus.util.jeans.util.IntervalCollection
 
copyModelProcessors(int, ClusModelInfo) - Method in class si.ijs.kt.clus.model.ClusModelInfo
 
copyModelProcessors(ClusModelInfo) - Method in class si.ijs.kt.clus.model.ClusModelInfo
 
copyNormalizedWeighted(double) - Method in class si.ijs.kt.clus.statistic.ClusStatistic
Clone this statistic by taking the given weight into account
copyNormalizedWeighted(double) - Method in class si.ijs.kt.clus.statistic.GISStat
Deprecated.
Clone this statistic by taking the given weight into account.
copyNormalizedWeighted(double) - Method in class si.ijs.kt.clus.statistic.RegressionStat
Clone this statistic by taking the given weight into account.
copyNormalizedWeighted(double) - Method in class si.ijs.kt.clus.statistic.RegressionStatBinaryNomiss
Clone this statistic by taking the given weight into account.
copyPropertiesOfInheritedClass(T, E) - Method in class si.ijs.kt.clus.util.cloner.Cloner
copies all properties from src to dest.
copyTotal() - Method in class si.ijs.kt.clus.algo.split.CurrentBestTestAndHeuristic
 
copyTotal() - Method in class si.ijs.kt.clus.ext.optiontree.TestAndHeuristic
 
copyTotal(OptXValGroup) - Method in class si.ijs.kt.clus.ext.optxval.OptXValInduce
 
copyTrainingData() - Method in class si.ijs.kt.clus.main.ClusRun
 
correctCoverRuleCount(DataTuple) - Method in class si.ijs.kt.clus.algo.rules.ClusRuleSet
Returns the number of rules, that correctly predict a given tuple Correct prediction means that it is equal as original (for classification) and in certain bounds (for regression)
correlation(double[], double[]) - Static method in class si.ijs.kt.clus.util.ClusUtil
 
CorrelationMatrixComputer - Class in si.ijs.kt.clus.error
 
CorrelationMatrixComputer() - Constructor for class si.ijs.kt.clus.error.CorrelationMatrixComputer
 
cost - Variable in class si.ijs.kt.clus.pruning.SizeConstraintVisitor
 
Count - Enum constant in enum class si.ijs.kt.clus.main.settings.section.SettingsOutput.ShowInfo
 
COUNT - Enum constant in enum class si.ijs.kt.clus.main.settings.section.SettingsHMTR.HierarchyAggregationsHMTR
 
CountByTarget - Enum constant in enum class si.ijs.kt.clus.main.settings.section.SettingsOutput.ShowInfo
 
countClasses(RowData, double[]) - Method in class si.ijs.kt.clus.addon.hmc.HMCAverageSingleClass.HMCAverageSingleClass
 
countClassesRecursive(ClassTerm, int, int[]) - Method in class si.ijs.kt.clus.ext.hierarchical.ClassHierarchy
 
countLabel(ClusNode, int) - Method in class si.ijs.kt.clus.ext.ilevelc.ILevelCInduce
 
countNodesLeaves(ClusNode) - Static method in class si.ijs.kt.clus.ext.ensemble.ClusForest
 
countOnes(boolean[]) - Static method in class si.ijs.kt.clus.ext.hierarchical.ClassHierarchy
 
countPredictedRelevant() - Method in class si.ijs.kt.clus.algo.tdidt.ClusNode
 
countRows() - Method in class si.ijs.kt.clus.data.io.ClusReader
 
countRows2() - Method in class si.ijs.kt.clus.data.io.ClusReader
 
countTrueRelevant() - Method in class si.ijs.kt.clus.algo.tdidt.ClusNode
 
countViolatedConstaints(int[]) - Method in class si.ijs.kt.clus.ext.ilevelc.ILevelCInduce
 
countViolatedConstaints(RowData, int[]) - Method in class si.ijs.kt.clus.ext.ilevelc.ILevelCInduce
 
Coverage - Class in si.ijs.kt.clus.error.mlc
 
Coverage - Class in si.ijs.kt.clus.error.mlcForHmlc
 
Coverage - Enum constant in enum class si.ijs.kt.clus.main.settings.section.SettingsMLC.MultiLabelMeasures
 
Coverage() - Constructor for class si.ijs.kt.clus.error.mlcForHmlc.Coverage
 
Coverage(ClusErrorList, NominalAttrType[]) - Constructor for class si.ijs.kt.clus.error.mlc.Coverage
 
CoverageWeighted - Enum constant in enum class si.ijs.kt.clus.main.settings.section.SettingsRules.RulePredictionMethod
Each rule's prediction has a weight proportional to its coverage on the current learning set i.e., learning set on which the rule was learned
covers(DataTuple) - Method in class si.ijs.kt.clus.addon.hmc.ClusAmandaRules.AmandaRule
 
covers(DataTuple) - Method in class si.ijs.kt.clus.algo.rules.ClusRule
Does the rule tests cover the given tuple
covers(DataTuple) - Method in class si.ijs.kt.clus.algo.rules.ClusRuleLinearTerm
Does the term cover the given tuple
coversCorrect(DataTuple) - Method in class si.ijs.kt.clus.algo.rules.ClusRule
 
coversIncorrect() - Method in class si.ijs.kt.clus.algo.rules.ClusRule
 
create() - Method in class si.ijs.kt.clus.main.settings.section.SettingsAttribute
 
create() - Method in class si.ijs.kt.clus.main.settings.section.SettingsBeamSearch
 
create() - Method in class si.ijs.kt.clus.main.settings.section.SettingsConstraints
 
create() - Method in class si.ijs.kt.clus.main.settings.section.SettingsData
 
create() - Method in class si.ijs.kt.clus.main.settings.section.SettingsEnsemble
 
create() - Method in class si.ijs.kt.clus.main.settings.section.SettingsExhaustiveSearch
 
create() - Method in class si.ijs.kt.clus.main.settings.section.SettingsExperimental
 
create() - Method in class si.ijs.kt.clus.main.settings.section.SettingsGeneral
 
create() - Method in class si.ijs.kt.clus.main.settings.section.SettingsHMLC
 
create() - Method in class si.ijs.kt.clus.main.settings.section.SettingsHMTR
 
create() - Method in class si.ijs.kt.clus.main.settings.section.SettingsILevelC
 
create() - Method in class si.ijs.kt.clus.main.settings.section.SettingsKNN
 
create() - Method in class si.ijs.kt.clus.main.settings.section.SettingsKNNTree
 
create() - Method in class si.ijs.kt.clus.main.settings.section.SettingsMLC
 
create() - Method in class si.ijs.kt.clus.main.settings.section.SettingsModel
 
create() - Method in class si.ijs.kt.clus.main.settings.section.SettingsNominal
 
create() - Method in class si.ijs.kt.clus.main.settings.section.SettingsOptionTree
 
create() - Method in class si.ijs.kt.clus.main.settings.section.SettingsOutput
 
create() - Method in class si.ijs.kt.clus.main.settings.section.SettingsPhylogeny
 
create() - Method in class si.ijs.kt.clus.main.settings.section.SettingsRelief
 
create() - Method in class si.ijs.kt.clus.main.settings.section.SettingsRules
 
create() - Method in class si.ijs.kt.clus.main.settings.section.SettingsSIT
 
create() - Method in class si.ijs.kt.clus.main.settings.section.SettingsSSL
 
create() - Method in class si.ijs.kt.clus.main.settings.section.SettingsTimeSeries
 
create() - Method in class si.ijs.kt.clus.main.settings.section.SettingsTree
 
create() - Method in class si.ijs.kt.clus.main.settings.SettingsBase
Method should handle the INIFileSection initialization.
create(ClusStatManager, int) - Method in class si.ijs.kt.clus.algo.split.CurrentBestTestAndHeuristic
Create statistics
create(ClusStatManager, int) - Method in class si.ijs.kt.clus.ext.optiontree.TestAndHeuristic
Create statistics
create(ClusStatManager, int) - Method in class si.ijs.kt.clus.ext.optxval.OptXValGroup
 
CREATE_TRAIN_TUNE_TEST_SPLIT - Static variable in class si.ijs.kt.clus.addon.hmc.HMCConvertDAGData.HMCConvertDAGData
 
create2(ClusStatManager, int) - Method in class si.ijs.kt.clus.ext.optxval.OptXValGroup
 
createAdditiveError() - Method in class si.ijs.kt.clus.main.ClusStatManager
 
createCallables(Iterable<T>, Parallel.Operation<T>) - Static method in class si.ijs.kt.clus.algo.rules.probabilistic.Parallel
 
createCannotLinkSet(DisjointSetForest) - Method in class si.ijs.kt.clus.ext.ilevelc.DerivedConstraintsComputer
 
createChildData(RowData, ClassesAttrType, int) - Method in class si.ijs.kt.clus.addon.hmc.HMCNodeWiseModels.hmcnwmodels.HMCNodeWiseModels
 
createChildSchema(ClusSchema, ClassesAttrType, String) - Method in class si.ijs.kt.clus.addon.hmc.HMCNodeWiseModels.hmcnwmodels.HMCNodeWiseModels
 
createClusAttrType(String, String) - Static method in class si.ijs.kt.clus.data.type.ClusAttrType
 
createClusteringStat() - Method in class si.ijs.kt.clus.main.ClusStatManager
 
createConstraints(RowData, int) - Method in class si.ijs.kt.clus.algo.rules.ClusRuleConstraintInduce
 
createConstraints(RowData, int) - Method in class si.ijs.kt.clus.ext.ilevelc.ILevelCInduce
 
createConstraintsIndex() - Method in class si.ijs.kt.clus.ext.ilevelc.ILevelCInduce
 
createConstraintsIndex(int, ArrayList) - Static method in class si.ijs.kt.clus.ext.ilevelc.ILevelCUtil
 
createConstrStat(ClusNode, ClusStatManager, RowData) - Method in class si.ijs.kt.clus.ext.beamsearch.ClusBeamSyntacticConstraint
 
createData() - Method in class si.ijs.kt.clus.algo.ClusInductionAlgorithm
 
createData() - Method in class si.ijs.kt.clus.ext.exhaustivesearch.ClusExhaustiveInduce
 
createData() - Method in class si.ijs.kt.clus.ext.optxval.OptXValInduce
 
createDataObject(String, ClusAttrType) - Static method in class si.ijs.kt.clus.data.type.ClusAttrType
 
createDefaultError() - Method in class si.ijs.kt.clus.main.ClusStatManager
 
createDistance(ClusAttrType, Settings) - Static method in class si.ijs.kt.clus.data.type.ClusAttrType
 
createDSFWithMustLinks() - Method in class si.ijs.kt.clus.ext.ilevelc.DerivedConstraintsComputer
 
createError(String) - Method in class si.ijs.kt.clus.model.io.ClusTreeReader
 
createErrorMeasure(RowData, ClusAttributeWeights) - Method in class si.ijs.kt.clus.pruning.CartPruning
 
createErrorMeasure(RowData, ClusAttributeWeights) - Method in class si.ijs.kt.clus.pruning.PruneTree
 
createErrorMeasure(MultiScore) - Method in class si.ijs.kt.clus.main.ClusStatManager
 
createEvalError() - Method in class si.ijs.kt.clus.main.ClusStatManager
 
createExtraError(int) - Method in class si.ijs.kt.clus.main.ClusStatManager
 
createExtraStats() - Method in class si.ijs.kt.clus.ext.optxval.OptXValIndOV
Deprecated.
 
createFimp(ClusRun) - Method in class si.ijs.kt.clus.ext.featureRanking.ClusFeatureRanking
 
createFimp(ClusRun, String, int, int) - Method in class si.ijs.kt.clus.ext.featureRanking.ClusFeatureRanking
 
createFimp(ClusRun, String, int, int) - Method in class si.ijs.kt.clus.ext.featureRanking.ensemble.ClusEnsembleFeatureRankings
 
createFirstPop() - Method in class si.ijs.kt.clus.util.tools.optimization.de.DEPopulation
 
createFreqList(double, ClusStatistic[], int) - Method in class si.ijs.kt.clus.algo.split.NominalSplit
 
createHash() - Method in class si.ijs.kt.clus.data.type.primitive.NominalAttrType
 
createHeuristic(SettingsTree.Heuristic) - Method in class si.ijs.kt.clus.main.ClusStatManager
 
createHierarchy() - Static method in class si.ijs.kt.clus.util.tools.hier.GenerateData
Deprecated.
 
createIE(RowData) - Method in class si.ijs.kt.clus.ext.ilevelc.ILevelCInduce
 
createInduce(ClusSchema, Settings, CMDLineArgs) - Method in class si.ijs.kt.clus.algo.ClusInductionAlgorithmType
 
createInduce(ClusSchema, Settings, CMDLineArgs) - Method in class si.ijs.kt.clus.algo.kNN.KnnClassifier
 
createInduce(ClusSchema, Settings, CMDLineArgs) - Method in class si.ijs.kt.clus.algo.rules.ClusRuleClassifier
 
createInduce(ClusSchema, Settings, CMDLineArgs) - Method in class si.ijs.kt.clus.algo.rules.tune.FIREROSTune
 
createInduce(ClusSchema, Settings, CMDLineArgs) - Method in class si.ijs.kt.clus.algo.tdidt.ClusDecisionTree
 
createInduce(ClusSchema, Settings, CMDLineArgs) - Method in class si.ijs.kt.clus.algo.tdidt.tune.CDTTuneFTest
 
createInduce(ClusSchema, Settings, CMDLineArgs) - Method in class si.ijs.kt.clus.ext.beamsearch.ClusBeamSearch
 
createInduce(ClusSchema, Settings, CMDLineArgs) - Method in class si.ijs.kt.clus.ext.ensemble.ClusEnsembleClassifier
 
createInduce(ClusSchema, Settings, CMDLineArgs) - Method in class si.ijs.kt.clus.ext.exhaustivesearch.ClusExhaustiveSearch
 
createInduce(ClusSchema, Settings, CMDLineArgs) - Method in class si.ijs.kt.clus.ext.featureRanking.relief.Relief
 
createInduce(ClusSchema, Settings, CMDLineArgs) - Method in class si.ijs.kt.clus.ext.optiontree.ClusOptionTree
 
createInduce(ClusSchema, Settings, CMDLineArgs) - Method in class si.ijs.kt.clus.ext.optxval.OptXVal
Deprecated.
 
createInduce(ClusSchema, Settings, CMDLineArgs) - Method in class si.ijs.kt.clus.ext.semisupervised.ClusSemiSupervisedClassifier
 
createInitHier(ClassTerm, int) - Static method in class si.ijs.kt.clus.util.tools.hier.GenerateData
Deprecated.
 
createInitHierarchy() - Static method in class si.ijs.kt.clus.util.tools.hier.GenerateData
Deprecated.
 
createInitialClusters(RowData, ArrayList) - Method in class si.ijs.kt.clus.ext.ilevelc.COPKMeans
 
createInMemoryData() - Method in class si.ijs.kt.clus.data.rows.TupleIterator
 
createInstance() - Method in class si.ijs.kt.clus.pruning.CartVisitor
 
createInstance() - Method in class si.ijs.kt.clus.pruning.ErrorVisitor
 
createLeaveOneOutXVAL(int) - Method in class si.ijs.kt.clus.selection.XValRandomSelection
 
createLinTerm(int, int, double) - Static method in class si.ijs.kt.clus.algo.rules.ClusRuleLinearTerm
Return new linear term with weight
createNormalView() - Method in class si.ijs.kt.clus.data.ClusSchema
 
createNormalView(ClusView) - Method in class si.ijs.kt.clus.data.ClusSchema
 
createPredefinedDoubles() - Static method in class si.ijs.kt.clus.data.type.primitive.SparseNumericAttrType
 
createRandomizedOOBdata(OOBSelection, RowData, int, int, int) - Method in class si.ijs.kt.clus.ext.featureRanking.ClusFeatureRanking
Implements the Fisher-Yates algorithm for uniform shuffling.
createRegularXVAL(int, int, Random) - Method in class si.ijs.kt.clus.selection.XValRandomSelection
 
createRootNode(RowData, ClusStatistic, ClusStatistic) - Method in class si.ijs.kt.clus.algo.tdidt.ConstraintDFInduce
 
createRowSerializable() - Method in class si.ijs.kt.clus.data.type.ClusAttrType
 
createRowSerializable() - Method in class si.ijs.kt.clus.data.type.complex.SetAttrType
 
createRowSerializable() - Method in class si.ijs.kt.clus.data.type.complex.TupleAttrType
 
createRowSerializable() - Method in class si.ijs.kt.clus.data.type.hierarchies.ClassesAttrType
 
createRowSerializable() - Method in class si.ijs.kt.clus.data.type.hierarchies.FlatClassesAttrType
 
createRowSerializable() - Method in class si.ijs.kt.clus.data.type.primitive.IntegerAttrType
 
createRowSerializable() - Method in class si.ijs.kt.clus.data.type.primitive.NominalAttrType
 
createRowSerializable() - Method in class si.ijs.kt.clus.data.type.primitive.NumericAttrType
 
createRowSerializable() - Method in class si.ijs.kt.clus.data.type.primitive.SparseNumericAttrType
 
createRowSerializable() - Method in class si.ijs.kt.clus.data.type.primitive.StringAttrType
 
createRowSerializable() - Method in class si.ijs.kt.clus.data.type.primitive.TimeSeriesAttrType
 
createRowSerializable(RowData, boolean) - Method in class si.ijs.kt.clus.data.type.primitive.IndexAttrType
 
createSearchDistance(ClusRun, SettingsKNN, AttributeWeighting) - Static method in class si.ijs.kt.clus.algo.kNN.KnnModel
 
createSimpleHierarchy() - Static method in class si.ijs.kt.clus.util.tools.hier.GenerateData
Deprecated.
 
createSimpleHierarchy(ClassTerm, int) - Static method in class si.ijs.kt.clus.util.tools.hier.GenerateData
Deprecated.
 
createStatistic(ClusAttrType.AttributeUseType) - Method in class si.ijs.kt.clus.main.ClusStatManager
 
createStats() - Method in class si.ijs.kt.clus.ext.optxval.OptXValInduce
 
createStringParser(String) - Static method in class si.ijs.kt.clus.util.jeans.util.MStreamTokenizer
 
createSuitableStat(NumericAttrType[], NominalAttrType[]) - Method in class si.ijs.kt.clus.main.ClusStatManager
 
createTargetAttr(ColTarget) - Method in class si.ijs.kt.clus.data.type.ClusAttrType
 
createTargetAttr(ColTarget) - Method in class si.ijs.kt.clus.data.type.primitive.NominalAttrType
 
createTargetAttr(ColTarget) - Method in class si.ijs.kt.clus.data.type.primitive.NumericAttrType
 
createTargetStat() - Method in class si.ijs.kt.clus.addon.hmc.HMCAverageSingleClass.HMCAverageSingleClass
 
createTargetStat() - Method in class si.ijs.kt.clus.main.ClusStatManager
 
createTokenizer() - Static method in class si.ijs.kt.clus.model.io.ClusTreeReader
 
createTotalClusteringStat(RowData) - Method in class si.ijs.kt.clus.algo.ClusInductionAlgorithm
 
createTotalStat(RowData) - Method in class si.ijs.kt.clus.algo.tdidt.tune.CDTuneSizeConstrPruning
 
createTotalTargetStat(RowData) - Method in class si.ijs.kt.clus.algo.ClusInductionAlgorithm
Compute the statistics for all the (rows in the) data.
createTuneError(ClusStatManager) - Method in class si.ijs.kt.clus.algo.rules.tune.FIREROSTune
 
createTuneError(ClusStatManager) - Method in class si.ijs.kt.clus.algo.tdidt.ClusSITDecisionTree
 
createTuneError(ClusStatManager) - Method in class si.ijs.kt.clus.algo.tdidt.tune.CDTTuneFTest
 
createTuple() - Method in class si.ijs.kt.clus.data.ClusSchema
 
createTuple() - Method in class si.ijs.kt.clus.data.rows.RowData
 
createValueByName(String, StringTable) - Method in class si.ijs.kt.clus.ext.hierarchical.ClassHierarchy
 
CriterionBasedSelection - Class in si.ijs.kt.clus.selection
 
CriterionBasedSelection() - Constructor for class si.ijs.kt.clus.selection.CriterionBasedSelection
 
critical_f_0001 - Static variable in class si.ijs.kt.clus.util.FTest
 
critical_f_0005 - Static variable in class si.ijs.kt.clus.util.FTest
 
critical_f_001 - Static variable in class si.ijs.kt.clus.util.FTest
 
critical_f_005 - Static variable in class si.ijs.kt.clus.util.FTest
 
critical_f_01 - Static variable in class si.ijs.kt.clus.util.FTest
 
CurrentBestTestAndHeuristic - Class in si.ijs.kt.clus.algo.split
 
CurrentBestTestAndHeuristic(Settings) - Constructor for class si.ijs.kt.clus.algo.split.CurrentBestTestAndHeuristic
 
cutTrees(ClusNode) - Static method in class si.ijs.kt.clus.algo.tdidt.ClusNode
 
CwithNeighbours - Enum constant in enum class si.ijs.kt.clus.main.settings.section.SettingsTree.SpatialMeasure
 

D

DAG - Enum constant in enum class si.ijs.kt.clus.main.settings.section.SettingsHMLC.HierarchyType
 
DAG - Enum constant in enum class si.ijs.kt.clus.main.settings.section.SettingsHMTR.HierarchyTypesHMTR
 
DAG - Static variable in class si.ijs.kt.clus.ext.hierarchical.ClassHierarchy
 
data - Variable in class si.ijs.kt.clus.ext.beamsearch.ClusBeamAttrSelector
 
data - Variable in class si.ijs.kt.clus.heuristic.EncodingCost
 
DataPreprocs - Class in si.ijs.kt.clus.data.rows
 
DataPreprocs() - Constructor for class si.ijs.kt.clus.data.rows.DataPreprocs
 
DataTuple - Class in si.ijs.kt.clus.data.rows
 
DataTuple() - Constructor for class si.ijs.kt.clus.data.rows.DataTuple
 
DataTuple(ClusSchema) - Constructor for class si.ijs.kt.clus.data.rows.DataTuple
Creates a dummy DataTuple of a given schema.
DEAlgorithm - Class in si.ijs.kt.clus.util.tools.optimization.de
Differential evolution algorithm.
DEAlgorithm(ClusStatManager, OptimizationProblem.OptimizationParameter, ClusRuleSet) - Constructor for class si.ijs.kt.clus.util.tools.optimization.de.DEAlgorithm
Constructor for classification and regression optimization.
DEBUG - Static variable in class si.ijs.kt.clus.data.cols.attribute.NominalAttribute
 
DEBUG - Variable in class si.ijs.kt.clus.data.cols.attribute.NumericAttribute
 
DebugFile - Class in si.ijs.kt.clus.util
 
DebugFile() - Constructor for class si.ijs.kt.clus.util.DebugFile
 
DecisionList - Enum constant in enum class si.ijs.kt.clus.main.settings.section.SettingsRules.RulePredictionMethod
 
decomposeArrayStr(String) - Static method in class si.ijs.kt.clus.ext.featureRanking.Fimp
Converts, e.g., "[I, love, Clus]" to ["I", "love", "Clus"].
deductFromBeamOpt(ClusBeam, ClusBeamModel, int) - Method in class si.ijs.kt.clus.ext.beamsearch.ClusBeamModelDistance
 
deepClone(T) - Method in class si.ijs.kt.clus.util.cloner.Cloner
deep clones "o".
deepClone(T, Map<Object, Object>) - Method in interface si.ijs.kt.clus.util.cloner.IDeepCloner
deep clones o
deepCloneData() - Method in class si.ijs.kt.clus.data.rows.RowData
 
deepCloneDontCloneInstances(T, Object...) - Method in class si.ijs.kt.clus.util.cloner.Cloner
 
deepCloneTuple() - Method in class si.ijs.kt.clus.data.rows.DataTuple
 
deepCloneTuple() - Method in class si.ijs.kt.clus.data.rows.SparseDataTuple
 
Default - Enum constant in enum class si.ijs.kt.clus.main.settings.section.SettingsOutput.ShowModels
 
Default - Enum constant in enum class si.ijs.kt.clus.main.settings.section.SettingsTree.Heuristic
 
Default - Enum constant in enum class si.ijs.kt.clus.main.settings.section.SettingsTree.PruningMethod
 
DEFAULT - Static variable in class si.ijs.kt.clus.main.settings.SettingsBase
Simple constants *
DEFAULT - Static variable in interface si.ijs.kt.clus.model.ClusModel
The type of model returned.
DEFAULT_ERROR - Static variable in class si.ijs.kt.clus.error.common.ClusError
 
DEFAULT_INTERNAL_FOLD - Static variable in class si.ijs.kt.clus.main.settings.section.SettingsSSL
 
DEFAULT_MODEL_NAME_WITH_CONSTANT_WEIGHTS - Static variable in class si.ijs.kt.clus.algo.kNN.KnnClassifier
 
DEFAULT_POSTFIX - Static variable in class si.ijs.kt.clus.error.common.ClusError
 
DefaultModel - Enum constant in enum class si.ijs.kt.clus.main.settings.section.SettingsTree.MissingTargetAttributeHandlingType
variance and mean (i.e., prediction) will be estimated on the basis of the root node (i.e., default model)
deg2rad(double) - Method in class si.ijs.kt.clus.heuristic.GISHeuristic
 
deg2rad(double) - Method in class si.ijs.kt.clus.heuristic.VarianceReductionHeuristicCompatibility
 
DEIndividual - Class in si.ijs.kt.clus.util.tools.optimization.de
Class representing a DE individual
DEIndividual() - Constructor for class si.ijs.kt.clus.util.tools.optimization.de.DEIndividual
 
delete(String) - Static method in class si.ijs.kt.clus.util.jeans.util.FileUtil
 
deleteData() - Method in class si.ijs.kt.clus.main.ClusRun
 
deleteDataAndModels() - Method in class si.ijs.kt.clus.main.ClusRun
 
deleteElement() - Method in class si.ijs.kt.clus.util.jeans.util.list.MyListIter
 
DeleteImplicitLinearTerms() - Static method in class si.ijs.kt.clus.algo.rules.ClusRuleLinearTerm
When the real linear terms are added to RuleSet, the implicit ones can be deleted
DeleteImplicitLinearTerms() - Method in class si.ijs.kt.clus.util.tools.optimization.ImplicitLinearTerms
 
deleteModel() - Method in class si.ijs.kt.clus.model.ClusModelInfo
 
deleteModels() - Method in class si.ijs.kt.clus.main.ClusModelInfoList
 
DELIMS - Static variable in class si.ijs.kt.clus.util.jeans.util.IntervalCollection
 
DELTA - Static variable in class si.ijs.kt.clus.heuristic.ClusHeuristic
 
delta_u1 - Variable in class si.ijs.kt.clus.pruning.CartVisitor
 
delta_u2 - Variable in class si.ijs.kt.clus.pruning.CartVisitor
 
deltaHeur() - Static method in class si.ijs.kt.clus.main.ClusStat
 
deltaSort() - Static method in class si.ijs.kt.clus.main.ClusStat
 
deltaSplit() - Static method in class si.ijs.kt.clus.main.ClusStat
 
deltaStat() - Static method in class si.ijs.kt.clus.main.ClusStat
 
deltaTest() - Static method in class si.ijs.kt.clus.main.ClusStat
 
DEPopulation - Class in si.ijs.kt.clus.util.tools.optimization.de
Class representing the population.
DEPopulation(ClusStatManager, DEProblem) - Constructor for class si.ijs.kt.clus.util.tools.optimization.de.DEPopulation
 
DEProblem - Class in si.ijs.kt.clus.util.tools.optimization.de
Class representing a Differential evolution optimization problem.
DEProblem(ClusStatManager, OptimizationProblem.OptimizationParameter, ClusRuleSet) - Constructor for class si.ijs.kt.clus.util.tools.optimization.de.DEProblem
Constructor for problem to be solved with differential evolution.
DEPTH_FIRST - Static variable in class si.ijs.kt.clus.algo.tdidt.ClusDecisionTree
 
DepthFirst - Enum constant in enum class si.ijs.kt.clus.main.settings.section.SettingsTree.InductionOrder
 
DepthFirst_getDescriptiveAttributes - Enum constant in enum class si.ijs.kt.clus.ext.ensemble.ClusEnsembleInduce.ParallelTrap
 
DepthFirstInduce - Class in si.ijs.kt.clus.algo.tdidt
 
DepthFirstInduce(ClusInductionAlgorithm) - Constructor for class si.ijs.kt.clus.algo.tdidt.DepthFirstInduce
 
DepthFirstInduce(ClusInductionAlgorithm, NominalSplit) - Constructor for class si.ijs.kt.clus.algo.tdidt.DepthFirstInduce
 
DepthFirstInduce(ClusInductionAlgorithm, ClusStatManager, boolean) - Constructor for class si.ijs.kt.clus.algo.tdidt.DepthFirstInduce
Used in parallelisation.
DepthFirstInduce(ClusSchema, Settings) - Constructor for class si.ijs.kt.clus.algo.tdidt.DepthFirstInduce
 
DepthFirstInduceSparse - Class in si.ijs.kt.clus.algo.tdidt
 
DepthFirstInduceSparse(ClusInductionAlgorithm) - Constructor for class si.ijs.kt.clus.algo.tdidt.DepthFirstInduceSparse
 
DepthFirstInduceSparse(ClusInductionAlgorithm, NominalSplit) - Constructor for class si.ijs.kt.clus.algo.tdidt.DepthFirstInduceSparse
 
DepthFirstInduceSparse(ClusInductionAlgorithm, ClusStatManager, boolean) - Constructor for class si.ijs.kt.clus.algo.tdidt.DepthFirstInduceSparse
Used in parallelisation.
DepthFirstInduceSparse(ClusSchema, Settings) - Constructor for class si.ijs.kt.clus.algo.tdidt.DepthFirstInduceSparse
 
DepthFirstInduceWithOptions - Class in si.ijs.kt.clus.ext.optiontree
 
DepthFirstInduceWithOptions(ClusSchema, Settings) - Constructor for class si.ijs.kt.clus.ext.optiontree.DepthFirstInduceWithOptions
 
DerivedConstraintsComputer - Class in si.ijs.kt.clus.ext.ilevelc
 
DerivedConstraintsComputer(ArrayList, ArrayList<ILevelConstraint>) - Constructor for class si.ijs.kt.clus.ext.ilevelc.DerivedConstraintsComputer
 
Descriptive - Enum constant in enum class si.ijs.kt.clus.data.type.ClusAttrType.AttributeUseType
 
Descriptive - Enum constant in enum class si.ijs.kt.clus.main.settings.section.SettingsEnsemble.RandomAttributeTypeSelection
 
DESCRIPTIVE_SPACE - Static variable in class si.ijs.kt.clus.ext.featureRanking.relief.ClusReliefFeatureRanking
 
DETAIL_ALWAYS_VISIBLE - Static variable in class si.ijs.kt.clus.error.common.ClusError
 
DETAIL_NEVER_VISIBLE - Static variable in class si.ijs.kt.clus.error.common.ClusError
 
DETAIL_SMALL - Static variable in class si.ijs.kt.clus.error.common.ClusError
 
DETAIL_VERY_SMALL - Static variable in class si.ijs.kt.clus.error.common.ClusError
 
determineBoostrapping() - Method in class si.ijs.kt.clus.main.settings.section.SettingsEnsemble
If bootstrapping is not defined, choose the appropriate default value for the selected ensemble method.
devide2(XValGroup[], int, int, int) - Method in class si.ijs.kt.clus.selection.XValRandomSelection
Selects randomly the data for all the folds fold.
df(double, double, double, double) - Method in class si.ijs.kt.clus.statistic.RegressionStatBase
Computes approximate degrees of freedom for 2-sample t-test.
DFS_BLACK - Static variable in class si.ijs.kt.clus.ext.hierarchical.ClassHierarchy
 
DFS_GRAY - Static variable in class si.ijs.kt.clus.ext.hierarchical.ClassHierarchy
 
DFS_WHITE - Static variable in class si.ijs.kt.clus.ext.hierarchical.ClassHierarchy
 
DH - Enum constant in enum class si.ijs.kt.clus.main.settings.section.SettingsTree.SpatialMeasure
 
diff(double, double) - Static method in class si.ijs.kt.clus.distance.primitive.timeseries.QDMTimeSeriesDist
 
dirList(String) - Static method in class si.ijs.kt.clus.util.jeans.util.FileUtil
Return a list of all the files in a given (by name) Directory.
dirList(String, String) - Static method in class si.ijs.kt.clus.util.jeans.util.FileUtil
Return a list of all the files in a given (by name) Directory, filtered by Extension.
Disabled - Enum constant in enum class si.ijs.kt.clus.data.type.ClusAttrType.Status
 
Disabled - Enum constant in enum class si.ijs.kt.clus.main.settings.section.SettingsEnsemble.EnsembleROSAlgorithmType
ROS is disabled
Disabled - Enum constant in enum class si.ijs.kt.clus.main.settings.section.SettingsHMTR.HierarchyTypesHMTR
 
disableRuleInduceParams() - Method in class si.ijs.kt.clus.main.settings.section.SettingsRules
For forest induction, disable rule parameters that interfere.
DisjointSetForest - Class in si.ijs.kt.clus.util.jeans.util
 
DisjointSetForest(int) - Constructor for class si.ijs.kt.clus.util.jeans.util.DisjointSetForest
 
DiskTupleIterator - Class in si.ijs.kt.clus.data.rows
 
DiskTupleIterator(String, ClusSchemaInitializer, DataPreprocs, Settings) - Constructor for class si.ijs.kt.clus.data.rows.DiskTupleIterator
 
dispersion(int) - Method in class si.ijs.kt.clus.statistic.CombStat
Returns the dispersion over clustering or all attributes (nominal and numeric).
DispersionAdt - Enum constant in enum class si.ijs.kt.clus.main.settings.section.SettingsTree.Heuristic
 
dispersionAdtHeur() - Method in class si.ijs.kt.clus.statistic.CombStat
Dispersion based heuristic - additive version Smaller values are better!
dispersionCalc() - Method in class si.ijs.kt.clus.statistic.CombStat
Returns the dispersion of all attributes.
DispersionMlt - Enum constant in enum class si.ijs.kt.clus.main.settings.section.SettingsTree.Heuristic
 
dispersionMltHeur() - Method in class si.ijs.kt.clus.statistic.CombStat
Dispersion based heuristic - multiplicative version Smaller values are better!
dispersionNom(int) - Method in class si.ijs.kt.clus.statistic.CombStat
Returns the dispersion of nominal attributes.
dispersionNum(int) - Method in class si.ijs.kt.clus.statistic.CombStat
Returns the dispersion of numeric attributes.
Distance - Class in si.ijs.kt.clus.statistic
 
DistanceB - Class in si.ijs.kt.clus.statistic
 
DistanceClassic - Enum constant in enum class si.ijs.kt.clus.main.settings.section.SettingsRelief.ReliefStatisticsType
 
distanceName() - Method in class si.ijs.kt.clus.distance.primitive.relief.MultiLabelDistance
 
DistanceSimplified - Class in si.ijs.kt.clus.ext.featureRanking.relief.statistics
 
DistanceSimplified - Enum constant in enum class si.ijs.kt.clus.main.settings.section.SettingsRelief.ReliefStatisticsType
 
DistanceSimplified(ClusReliefFeatureRanking, int, int, int) - Constructor for class si.ijs.kt.clus.ext.featureRanking.relief.statistics.DistanceSimplified
 
DistanceWeighting - Class in si.ijs.kt.clus.algo.kNN.distance.distanceWeighting
 
DistanceWeighting(LinkedList<DataTuple>, SearchAlgorithm, DataTuple) - Constructor for class si.ijs.kt.clus.algo.kNN.distance.distanceWeighting.DistanceWeighting
Inicialize new distance weigthing schem for set of tuples, selected algorithm and interested tuple.
Distribution - Enum constant in enum class si.ijs.kt.clus.main.settings.section.SettingsOutput.ShowInfo
 
divide(double[], double[]) - Static method in class si.ijs.kt.clus.util.jeans.util.array.MDoubleArray
 
divide(MNumber) - Method in class si.ijs.kt.clus.util.jeans.math.MNumber
 
DNA - Enum constant in enum class si.ijs.kt.clus.main.settings.section.SettingsPhylogeny.PhylogenySequence
 
doAdd(MNumber) - Method in class si.ijs.kt.clus.util.jeans.math.MDouble
 
doAdd(MNumber) - Method in class si.ijs.kt.clus.util.jeans.math.MNumber
 
doDivide(MNumber) - Method in class si.ijs.kt.clus.util.jeans.math.MDouble
 
doDivide(MNumber) - Method in class si.ijs.kt.clus.util.jeans.math.MNumber
 
doLoad(String, String, MStreamTokenizer) - Method in class si.ijs.kt.clus.util.jeans.io.ini.INIFileSection
 
doLoad(String, MStreamTokenizer) - Method in class si.ijs.kt.clus.util.jeans.io.ini.INIFileSection
 
doMultiply(MNumber) - Method in class si.ijs.kt.clus.util.jeans.math.MDouble
 
doMultiply(MNumber) - Method in class si.ijs.kt.clus.util.jeans.math.MNumber
 
done(int) - Method in class si.ijs.kt.clus.data.rows.DataPreprocs
 
done(int) - Method in interface si.ijs.kt.clus.data.rows.TuplePreproc
 
done(int) - Method in class si.ijs.kt.clus.ext.hierarchical.ClassHierarchyPreproc
 
dontClone(Class<?>...) - Method in class si.ijs.kt.clus.util.cloner.Cloner
instances of classes that shouldn't be cloned can be registered using this method.
dontCloneInstanceOf(Class<?>...) - Method in class si.ijs.kt.clus.util.cloner.Cloner
 
doOneClass(ClassTerm, ClusRun) - Method in class si.ijs.kt.clus.addon.hmc.HMCAverageSingleClass.HMCAverageNodeWiseModels
 
doOneFold(int, ClusInductionAlgorithmType, XValMainSelection, ClusModelCollectionIO, PredictionWriter, ClusOutput, ClusErrorOutput, ClusEnsemblePredictionWriter) - Method in class si.ijs.kt.clus.Clus
 
doOneFold(RowData, RowData) - Method in class si.ijs.kt.clus.ext.timeseries.TimeSeriesSignificantChangeTesterXVAL
 
doOneNode(ClassTerm, ClassHierarchy, RowData, RowData, RowData) - Method in class si.ijs.kt.clus.addon.hmc.HMCNodeWiseModels.hmcnwmodels.HMCNodeWiseModels
 
doParamXVal(ClusData, ClusData) - Method in class si.ijs.kt.clus.algo.tdidt.ClusSITDecisionTree
 
doParamXVal(RowData, RowData) - Method in class si.ijs.kt.clus.algo.rules.tune.FIREROSTune
 
doParamXVal(RowData, RowData) - Method in class si.ijs.kt.clus.algo.tdidt.tune.CDTTuneFTest
 
doPrune(ClusNode) - Method in class si.ijs.kt.clus.pruning.EncodingCostPruning
 
doRun() - Method in class si.ijs.kt.clus.addon.hmc.HMCNodeWiseModels.hmcnwmodels.HMCNodeWiseModels
 
doSubstract(MNumber) - Method in class si.ijs.kt.clus.util.jeans.math.MDouble
 
doSubstract(MNumber) - Method in class si.ijs.kt.clus.util.jeans.math.MNumber
 
dot(double[], double[]) - Static method in class si.ijs.kt.clus.util.jeans.math.matrix.MMatrix
 
dot(MySparseVector, double[]) - Static method in class si.ijs.kt.clus.util.jeans.math.matrix.MMatrix
 
dot_delta(double[], double[], double[], double[]) - Static method in class si.ijs.kt.clus.util.jeans.math.matrix.MMatrix
 
doTest(NodeTest, DataTuple) - Method in class si.ijs.kt.clus.addon.hmc.ClusAmandaRules.AmandaRule
 
dotscalar(double[], double) - Static method in class si.ijs.kt.clus.util.jeans.util.array.MDoubleArray
 
Double - Enum constant in enum class si.ijs.kt.clus.data.type.ClusAttrType.ValueType
 
DOUBLE_CHARS - Static variable in class si.ijs.kt.clus.util.jeans.util.StringUtils
 
DoubleBoolean - Class in si.ijs.kt.clus.util.jeans.util.compound
Parent class of the DoubleBooleanCount that stores statistics that are used when building ROC- and PR-curves.
DoubleBoolean(double, boolean) - Constructor for class si.ijs.kt.clus.util.jeans.util.compound.DoubleBoolean
See DoubleBooleanCount.DoubleBooleanCount(double val, boolean bol).
DoubleBooleanCount - Class in si.ijs.kt.clus.util.jeans.util.compound
Class that stores prediction statistics that are used when building ROC- and PR-curves.
DoubleBooleanCount(double, boolean) - Constructor for class si.ijs.kt.clus.util.jeans.util.compound.DoubleBooleanCount
Constructor for this type.
DoubleBooleanCount(DoubleBooleanCount) - Constructor for class si.ijs.kt.clus.util.jeans.util.compound.DoubleBooleanCount
 
DoubleIndexSorter - Class in si.ijs.kt.clus.util.jeans.util.sort
 
DoubleIndexSorter() - Constructor for class si.ijs.kt.clus.util.jeans.util.sort.DoubleIndexSorter
 
DoubleObject - Class in si.ijs.kt.clus.util.jeans.util.compound
 
DoubleObject() - Constructor for class si.ijs.kt.clus.util.jeans.util.compound.DoubleObject
 
DoubleObject(double, Object) - Constructor for class si.ijs.kt.clus.util.jeans.util.compound.DoubleObject
 
DoubleRangeCheck - Class in si.ijs.kt.clus.util.jeans.io.range
 
DoubleRangeCheck(double, double) - Constructor for class si.ijs.kt.clus.util.jeans.io.range.DoubleRangeCheck
 
DOUBLES - Static variable in class si.ijs.kt.clus.data.type.primitive.SparseNumericAttrType
 
DoublesPair - Class in si.ijs.kt.clus.ext.semisupervised.utils
Structure that contains two doubles
DoublesPair(double, double) - Constructor for class si.ijs.kt.clus.ext.semisupervised.utils.DoublesPair
 
dropStepSize(double) - Method in class si.ijs.kt.clus.util.tools.optimization.gd.GDProblem
In case of oscillation, make the step size shorter We should be changing the step size just enough not to prevent further oscillation
DTW - Enum constant in enum class si.ijs.kt.clus.main.settings.section.SettingsTimeSeries.TimeSeriesDistanceMeasure
 
DTW - Enum constant in enum class si.ijs.kt.clus.main.settings.section.SettingsTree.TimeSeriesDistanceMeasure
 
DTWTimeSeriesDist - Class in si.ijs.kt.clus.distance.primitive.timeseries
 
DTWTimeSeriesDist(TimeSeriesAttrType) - Constructor for class si.ijs.kt.clus.distance.primitive.timeseries.DTWTimeSeriesDist
 
DUMMY_INSTANCES - Static variable in class si.ijs.kt.clus.main.settings.section.SettingsKNN
 
DUMMY_INSTANCES - Static variable in class si.ijs.kt.clus.main.settings.section.SettingsRelief
 
DUMMY_INT - Static variable in class si.ijs.kt.clus.data.rows.DataTuple
 
DUMMY_TARGET - Static variable in class si.ijs.kt.clus.ext.featureRanking.relief.nearestNeighbour.SaveLoadNeighbours
 
DummySerializable - Class in si.ijs.kt.clus.util.io
 
DummySerializable() - Constructor for class si.ijs.kt.clus.util.io.DummySerializable
 
DuoObject - Class in si.ijs.kt.clus.util.jeans.util.compound
 
DuoObject(Object, Object) - Constructor for class si.ijs.kt.clus.util.jeans.util.compound.DuoObject
 
DYNAMIC_WEIGHT - Static variable in class si.ijs.kt.clus.main.settings.section.SettingsEnsemble
 
DynamicSubspaces - Enum constant in enum class si.ijs.kt.clus.main.settings.section.SettingsEnsemble.EnsembleROSAlgorithmType
Similar to Random forest algorithm, this option selects a different subset of targets on every split.

E

edblock - Variable in class si.ijs.kt.clus.util.jeans.util.MStringTokenizer
 
Edit - Enum constant in enum class si.ijs.kt.clus.main.settings.section.SettingsPhylogeny.PhylogenyDistanceMeasure
 
effcalculate(GeneticDistanceStat, GeneticDistanceStat, int[]) - Method in class si.ijs.kt.clus.heuristic.GeneticDistanceHeuristicMatrix
 
elementAt(int) - Method in class si.ijs.kt.clus.util.jeans.util.array.MyIntArray
 
elementAt(int) - Method in class si.ijs.kt.clus.util.jeans.util.MyArray
 
elements() - Method in class si.ijs.kt.clus.util.jeans.util.array.MyIntArray
 
EMPTY - Static variable in class si.ijs.kt.clus.main.settings.SettingsBase
 
EMPTY - Static variable in class si.ijs.kt.clus.util.jeans.util.IntervalCollection
 
EMPTY_SET_INDICATOR - Static variable in class si.ijs.kt.clus.ext.hierarchical.ClassesValue
 
enableVerbose(int) - Method in class si.ijs.kt.clus.main.settings.section.SettingsGeneral
 
EncodingCost - Class in si.ijs.kt.clus.heuristic
 
EncodingCost - Enum constant in enum class si.ijs.kt.clus.main.settings.section.SettingsTree.PruningMethod
 
EncodingCost() - Constructor for class si.ijs.kt.clus.heuristic.EncodingCost
 
EncodingCost(ArrayList<ClusNode>, ArrayList<RowData>, ClusAttrType[]) - Constructor for class si.ijs.kt.clus.heuristic.EncodingCost
 
EncodingCost(ArrayList<RowData>, ClusAttrType[]) - Constructor for class si.ijs.kt.clus.heuristic.EncodingCost
 
EncodingCostPruning - Class in si.ijs.kt.clus.pruning
 
EncodingCostPruning() - Constructor for class si.ijs.kt.clus.pruning.EncodingCostPruning
 
enforce(ClusNode, int) - Method in class si.ijs.kt.clus.ext.beamsearch.ClusBeamSizeConstraints
 
enoughNeighbours() - Method in class si.ijs.kt.clus.algo.kNN.methods.NNStack
 
ensureAtEnd() - Method in class si.ijs.kt.clus.data.io.ClusReader
 
ensureNextChar(int) - Method in class si.ijs.kt.clus.data.io.ClusReader
 
ensureSparse() - Method in class si.ijs.kt.clus.data.ClusSchema
 
enterBestTest(ClusNode, ClusNode, int[]) - Method in class si.ijs.kt.clus.ext.ilevelc.ILevelCInduce
 
entropy() - Method in class si.ijs.kt.clus.statistic.ClassificationStat
 
entropy(int) - Method in class si.ijs.kt.clus.statistic.ClassificationStat
 
entropy(int) - Method in class si.ijs.kt.clus.statistic.CombStat
Returns the entropy of attribute attr.
entropy(ClusAttributeWeights) - Method in class si.ijs.kt.clus.statistic.ClassificationStat
 
entropyDifference(ClassificationStat) - Method in class si.ijs.kt.clus.statistic.ClassificationStat
 
entropyDifference(ClassificationStat, ClusAttributeWeights) - Method in class si.ijs.kt.clus.statistic.ClassificationStat
 
entropyDifferenceROS(ClassificationStat, ClusAttributeWeights) - Method in class si.ijs.kt.clus.statistic.ClassificationStat
 
entropyROS(ClusAttributeWeights) - Method in class si.ijs.kt.clus.statistic.ClassificationStat
 
enumerateThresholds() - Method in class si.ijs.kt.clus.error.ROCAndPRCurve
 
enumerateThresholdsAll() - Method in class si.ijs.kt.clus.error.ROCAndPRCurve
Computes points for PR- and ROC- curves that would be obtained if the threshold would go continuously from Infinity to 0.
enumerateThresholdsSelected(double[]) - Method in class si.ijs.kt.clus.error.ROCAndPRCurve
 
EnumerationGenerator - Class in si.ijs.kt.clus.util.jeans.util
A class that returns an Enumeration that returns only a subset of a given Enumeration using a certain filter.
EnumerationGenerator() - Constructor for class si.ijs.kt.clus.util.jeans.util.EnumerationGenerator
 
eq(double, double) - Static method in class si.ijs.kt.clus.util.ClusUtil
 
eq(double, double, double) - Static method in class si.ijs.kt.clus.util.ClusUtil
 
EQUAL - Static variable in interface si.ijs.kt.clus.util.jeans.util.sort.MComparator
 
EquallyWeighted - Enum constant in enum class si.ijs.kt.clus.main.settings.section.SettingsRules.RulePredictionMethod
Not yet implemented
equals(Object) - Method in class si.ijs.kt.clus.algo.rules.ClusRule
Equality is based on the tests only.
equals(Object) - Method in class si.ijs.kt.clus.algo.tdidt.ClusNode
 
equals(Object) - Method in class si.ijs.kt.clus.ext.beamsearch.ClusBeamModel
 
equals(Object) - Method in class si.ijs.kt.clus.ext.featureRanking.relief.nearestNeighbour.NearestNeighbour
 
equals(Object) - Method in class si.ijs.kt.clus.util.jeans.util.compound.DoubleBoolean
 
equals(Object) - Method in class si.ijs.kt.clus.util.UniqueNodeIdentifier
 
equals(RowData) - Method in class si.ijs.kt.clus.data.rows.RowData
 
equals(NodeTest) - Method in class si.ijs.kt.clus.model.test.ClusRuleConstraintInduceTest
 
equals(NodeTest) - Method in class si.ijs.kt.clus.model.test.FakeTest
 
equals(NodeTest) - Method in class si.ijs.kt.clus.model.test.NodeTest
Equality test
equals(NodeTest) - Method in class si.ijs.kt.clus.model.test.NominalTest
 
equals(NodeTest) - Method in class si.ijs.kt.clus.model.test.NumericTest
 
equals(NodeTest) - Method in class si.ijs.kt.clus.model.test.SoftTest
 
equals(NodeTest) - Method in class si.ijs.kt.clus.model.test.SubsetTest
 
equalsDeeply(Object) - Method in class si.ijs.kt.clus.algo.rules.ClusRule
Equality is based on the tests AND the targets.
equalsPath(int[]) - Method in class si.ijs.kt.clus.util.jeans.tree.MyNode
 
equalsTuple(ClassesTuple) - Method in class si.ijs.kt.clus.ext.hierarchical.ClassesTuple
 
equalsValue(ClassesValue) - Method in class si.ijs.kt.clus.ext.hierarchical.ClassesValue
 
equalsValue(IndexedItem) - Method in class si.ijs.kt.clus.util.jeans.util.compound.IndexedItem
 
EquvalentG - Enum constant in enum class si.ijs.kt.clus.main.settings.section.SettingsTree.SpatialMeasure
 
EquvalentGDistance - Enum constant in enum class si.ijs.kt.clus.main.settings.section.SettingsTree.SpatialMeasure
 
EquvalentI - Enum constant in enum class si.ijs.kt.clus.main.settings.section.SettingsTree.SpatialMeasure
 
EquvalentIDistance - Enum constant in enum class si.ijs.kt.clus.main.settings.section.SettingsTree.SpatialMeasure
 
EquvalentIwithNeighbours - Enum constant in enum class si.ijs.kt.clus.main.settings.section.SettingsTree.SpatialMeasure
 
EquvalentPDistance - Enum constant in enum class si.ijs.kt.clus.main.settings.section.SettingsTree.SpatialMeasure
 
error - Variable in class si.ijs.kt.clus.pruning.SizeConstraintVisitor
 
ERROR - Static variable in class si.ijs.kt.clus.ext.hierarchical.ClassHierarchy
 
ErrorOutput - Class in si.ijs.kt.clus.addon.sit
 
ErrorOutput(Settings) - Constructor for class si.ijs.kt.clus.addon.sit.ErrorOutput
 
ErrorVisitor - Class in si.ijs.kt.clus.pruning
 
ErrorVisitor() - Constructor for class si.ijs.kt.clus.pruning.ErrorVisitor
 
estimateBeamMeasure(ClusRule) - Method in class si.ijs.kt.clus.algo.rules.ClusRuleConstraintInduce
 
estimateBeamMeasure(ClusRule) - Method in class si.ijs.kt.clus.algo.rules.ClusRuleInduce
 
estimateBeamMeasure(ClusNode) - Method in class si.ijs.kt.clus.ext.beamsearch.ClusBeamHeuristic
 
estimateBeamMeasure(ClusNode) - Method in class si.ijs.kt.clus.ext.beamsearch.ClusBeamHeuristicError
 
estimateBeamMeasure(ClusNode) - Method in class si.ijs.kt.clus.ext.beamsearch.ClusBeamHeuristicMEstimate
 
estimateBeamMeasure(ClusNode) - Method in class si.ijs.kt.clus.ext.beamsearch.ClusBeamHeuristicMorishita
 
estimateBeamMeasure(ClusNode) - Method in class si.ijs.kt.clus.ext.beamsearch.ClusBeamHeuristicSS
 
estimateBeamMeasure(ClusNode) - Method in class si.ijs.kt.clus.ext.beamsearch.ClusBeamSearch
 
estimateBeamMeasure(ClusNode) - Method in class si.ijs.kt.clus.ext.exhaustivesearch.ClusExhaustiveSearch
 
estimateBeamMeasure(ClusNode, ClusNode) - Method in class si.ijs.kt.clus.ext.beamsearch.ClusBeamHeuristicMorishita
 
estimateBeamStats(ClusBeam) - Method in class si.ijs.kt.clus.ext.beamsearch.ClusBeamSearch
 
estimateBeamStats(ClusBeam) - Method in class si.ijs.kt.clus.ext.exhaustivesearch.ClusExhaustiveSearch
 
estimateClusteringSS(ClusAttributeWeights) - Method in class si.ijs.kt.clus.algo.tdidt.ClusNode
 
estimateClusteringSSRecursive(ClusNode, ClusAttributeWeights) - Static method in class si.ijs.kt.clus.algo.tdidt.ClusNode
 
estimateClusteringVariance(ClusAttributeWeights) - Method in class si.ijs.kt.clus.algo.tdidt.ClusNode
 
estimateError(ClusAttributeWeights) - Method in class si.ijs.kt.clus.algo.tdidt.ClusNode
 
estimateErrorAbsolute(ClusAttributeWeights) - Method in class si.ijs.kt.clus.algo.tdidt.ClusNode
 
estimateErrorRecursive(ClusNode) - Static method in class si.ijs.kt.clus.algo.tdidt.ClusNode
 
estimateErrorRecursive(ClusNode, ClusAttributeWeights) - Static method in class si.ijs.kt.clus.algo.tdidt.ClusNode
 
EstimateFromParentNode - Enum constant in enum class si.ijs.kt.clus.main.settings.section.SettingsTree.MissingClusteringAttributeHandlingType
 
EstimateFromTrainingSet - Enum constant in enum class si.ijs.kt.clus.main.settings.section.SettingsTree.MissingClusteringAttributeHandlingType
 
estimateRootScaledVariance(ClusNode, int, ClusAttributeWeights) - Static method in class si.ijs.kt.clus.pruning.M5PrunerMulti
 
estimateScaledVariance(ClusNode, int, ClusAttributeWeights) - Static method in class si.ijs.kt.clus.pruning.M5PrunerMulti
 
estimateTargetSS(ClusAttributeWeights) - Method in class si.ijs.kt.clus.algo.tdidt.ClusNode
 
estimateTargetSSRecursive(ClusNode, ClusAttributeWeights) - Static method in class si.ijs.kt.clus.algo.tdidt.ClusNode
 
euclDistance(DataTuple) - Method in class si.ijs.kt.clus.data.rows.DataTuple
Calculates euclidean distance between numeric attributes of two tuples.
Euclidean - Enum constant in enum class si.ijs.kt.clus.main.settings.section.SettingsKNN.Distance
 
Euclidean - Enum constant in enum class si.ijs.kt.clus.main.settings.section.SettingsTree.SetDistance
 
Euclidean - Enum constant in enum class si.ijs.kt.clus.main.settings.section.SettingsTree.SpatialMatrixType
 
Euclidean - Enum constant in enum class si.ijs.kt.clus.main.settings.section.SettingsTree.TupleDistance
 
EuclideanDistance - Class in si.ijs.kt.clus.distance.complex.sets
 
EuclideanDistance - Class in si.ijs.kt.clus.distance.complex.tuples
 
EuclideanDistance - Class in si.ijs.kt.clus.distance.primitive
EuclideanDistance works on all type of attributes.
EuclideanDistance(SetAttrType, ClusDistance) - Constructor for class si.ijs.kt.clus.distance.complex.sets.EuclideanDistance
 
EuclideanDistance(TupleAttrType, ClusDistance[]) - Constructor for class si.ijs.kt.clus.distance.complex.tuples.EuclideanDistance
 
EuclideanDistance(ClusDistance) - Constructor for class si.ijs.kt.clus.distance.complex.sets.EuclideanDistance
 
EuclideanDistance(ClusDistance[]) - Constructor for class si.ijs.kt.clus.distance.complex.tuples.EuclideanDistance
 
EuclideanDistance(SearchDistance, boolean, ClusAttrType[]) - Constructor for class si.ijs.kt.clus.distance.primitive.EuclideanDistance
 
eval(TargetSet, ClusAttrType) - Method in class si.ijs.kt.clus.addon.sit.searchAlgorithm.SearchAlgorithmImpl
 
evaluate(IChromosome) - Method in class si.ijs.kt.clus.addon.sit.searchAlgorithm.SITFitnessFunction
 
evaluate(DEProblem, int) - Method in class si.ijs.kt.clus.util.tools.optimization.de.DEIndividual
Re-evaluates this individuals fitness with the problems fitness function.
evaluateModelAndUpdateErrors(int, int, ClusModel, ClusRun) - Method in class si.ijs.kt.clus.addon.hmc.HMCAverageSingleClass.HMCAverageSingleClass
 
evaluatePop(int) - Method in class si.ijs.kt.clus.util.tools.optimization.de.DEPopulation
Evaluate population fitness with the population's function.
Evaluator - Class in si.ijs.kt.clus.addon.sit
Functions to evaluate predictions
Evaluator() - Constructor for class si.ijs.kt.clus.addon.sit.Evaluator
 
Exact - Enum constant in enum class si.ijs.kt.clus.main.settings.section.SettingsTree.SplitPositions
 
EXACT_TIME - Static variable in class si.ijs.kt.clus.main.settings.section.SettingsGeneric
 
exampleDone() - Method in class si.ijs.kt.clus.model.processor.ClusModelProcessor
 
exampleDone() - Method in class si.ijs.kt.clus.model.processor.ModelProcessorCollection
 
exampleDone() - Method in class si.ijs.kt.clus.model.processor.PredictionWriter
 
exampleUpdate(DataTuple) - Method in class si.ijs.kt.clus.model.processor.ClusModelProcessor
 
exampleUpdate(DataTuple) - Method in class si.ijs.kt.clus.model.processor.ModelProcessorCollection
 
exampleUpdate(DataTuple) - Method in class si.ijs.kt.clus.model.processor.PredictionWriter
 
exampleUpdate(DataTuple, ClusStatistic) - Method in class si.ijs.kt.clus.model.processor.ClusModelProcessor
 
exampleUpdate(DataTuple, ClusStatistic) - Method in class si.ijs.kt.clus.model.processor.ModelProcessorCollection
 
exampleUpdate(DataTuple, ClusStatistic) - Method in class si.ijs.kt.clus.model.processor.PredictionWriter
 
execute(Object) - Method in interface si.ijs.kt.clus.util.jeans.util.Executer
 
Executer - Interface in si.ijs.kt.clus.util.jeans.util
 
executeRecursive(ClusNode, WHTDStatistic, RowData) - Method in class si.ijs.kt.clus.ext.hierarchical.HierRemoveInsigClasses
 
exhaustiveRun(ClusInductionAlgorithmType) - Method in class si.ijs.kt.clus.Clus
 
exhaustiveSearch(ClusRun) - Method in class si.ijs.kt.clus.algo.tdidt.ClusSITDecisionTree
 
exhaustiveSearch(ClusRun) - Method in class si.ijs.kt.clus.ext.exhaustivesearch.ClusExhaustiveDFSearch
 
exhaustiveSearch(ClusRun) - Method in class si.ijs.kt.clus.ext.exhaustivesearch.ClusExhaustiveSearch
 
ExhaustiveSearch - Enum constant in enum class si.ijs.kt.clus.main.settings.section.SettingsSSL.SSLUnlabeledCriteria
ExhaustiveSearch - the optimal threshold will be selected from the specified list at each iteration
existsOOBtuple(DataTuple) - Method in class si.ijs.kt.clus.ext.ensemble.ClusOOBErrorEstimate
 
exit() - Static method in class si.ijs.kt.clus.util.DebugFile
 
ExpAvgParentWeight - Enum constant in enum class si.ijs.kt.clus.main.settings.section.SettingsHMLC.HierarchyWeight
 
ExpMaxParentWeight - Enum constant in enum class si.ijs.kt.clus.main.settings.section.SettingsHMLC.HierarchyWeight
 
ExpMinParentWeight - Enum constant in enum class si.ijs.kt.clus.main.settings.section.SettingsHMLC.HierarchyWeight
 
ExpSumParentWeight - Enum constant in enum class si.ijs.kt.clus.main.settings.section.SettingsHMLC.HierarchyWeight
 
EXT - Static variable in class si.ijs.kt.clus.ext.ilevelc.ILevelCHeurStat
 
ExtensionFilter - Class in si.ijs.kt.clus.util.jeans.util
A Filter Class to filter Files by Extension.
ExtensionFilter(String) - Constructor for class si.ijs.kt.clus.util.jeans.util.ExtensionFilter
Construct a new Extension Filter.
ExtraTrees - Enum constant in enum class si.ijs.kt.clus.main.settings.section.SettingsEnsemble.EnsembleMethod
 

F

F1Score - Class in si.ijs.kt.clus.error.sets
 
F1Score(ClusErrorList, SetAttrType[], ClusAttributeWeights, boolean, ClusDistance) - Constructor for class si.ijs.kt.clus.error.sets.F1Score
 
F1Score(ClusErrorList, SetAttrType[], ClusAttributeWeights, ClusDistance) - Constructor for class si.ijs.kt.clus.error.sets.F1Score
 
F1Score(ClusErrorList, SetAttrType[], ClusDistance) - Constructor for class si.ijs.kt.clus.error.sets.F1Score
 
fac - Variable in class si.ijs.kt.clus.distance.hierarchies.HierWeightSPath
 
FakeTest - Class in si.ijs.kt.clus.model.test
 
FakeTest() - Constructor for class si.ijs.kt.clus.model.test.FakeTest
 
fastClone(Object, Map<Object, Object>) - Method in class si.ijs.kt.clus.util.cloner.Cloner
 
fastCloneOrNewInstance(Class<T>) - Method in class si.ijs.kt.clus.util.cloner.Cloner
 
FastClonerArrayList - Class in si.ijs.kt.clus.util.cloner
 
FastClonerArrayList() - Constructor for class si.ijs.kt.clus.util.cloner.FastClonerArrayList
 
FastClonerCalendar - Class in si.ijs.kt.clus.util.cloner
 
FastClonerCalendar() - Constructor for class si.ijs.kt.clus.util.cloner.FastClonerCalendar
 
FastClonerConcurrentHashMap - Class in si.ijs.kt.clus.util.cloner
 
FastClonerConcurrentHashMap() - Constructor for class si.ijs.kt.clus.util.cloner.FastClonerConcurrentHashMap
 
FastClonerCustomCollection<T extends Collection> - Class in si.ijs.kt.clus.util.cloner
 
FastClonerCustomCollection() - Constructor for class si.ijs.kt.clus.util.cloner.FastClonerCustomCollection
 
FastClonerCustomMap<T extends Map> - Class in si.ijs.kt.clus.util.cloner
 
FastClonerCustomMap() - Constructor for class si.ijs.kt.clus.util.cloner.FastClonerCustomMap
 
FastClonerHashMap - Class in si.ijs.kt.clus.util.cloner
 
FastClonerHashMap() - Constructor for class si.ijs.kt.clus.util.cloner.FastClonerHashMap
 
FastClonerHashSet - Class in si.ijs.kt.clus.util.cloner
 
FastClonerHashSet() - Constructor for class si.ijs.kt.clus.util.cloner.FastClonerHashSet
 
FastClonerLinkedHashMap - Class in si.ijs.kt.clus.util.cloner
 
FastClonerLinkedHashMap() - Constructor for class si.ijs.kt.clus.util.cloner.FastClonerLinkedHashMap
 
FastClonerLinkedList - Class in si.ijs.kt.clus.util.cloner
 
FastClonerLinkedList() - Constructor for class si.ijs.kt.clus.util.cloner.FastClonerLinkedList
 
FastClonerTreeMap - Class in si.ijs.kt.clus.util.cloner
 
FastClonerTreeMap() - Constructor for class si.ijs.kt.clus.util.cloner.FastClonerTreeMap
 
fileExists(String) - Static method in class si.ijs.kt.clus.util.jeans.util.FileUtil
 
filename - Variable in class si.ijs.kt.clus.util.jeans.util.MStreamTokenizer
 
fileName(String) - Static method in class si.ijs.kt.clus.util.ClusUtil
From "a/b/c/d" or "a\\b\\c\\d" or "d" extracts d.
FileTupleIterator - Class in si.ijs.kt.clus.data.rows
 
FileTupleIterator(ClusSchema, ClusReader) - Constructor for class si.ijs.kt.clus.data.rows.FileTupleIterator
 
FileTupleIterator(ClusSchema, ClusReader, DataPreprocs) - Constructor for class si.ijs.kt.clus.data.rows.FileTupleIterator
 
FileTupleIterator(DataPreprocs) - Constructor for class si.ijs.kt.clus.data.rows.FileTupleIterator
 
FileUtil - Class in si.ijs.kt.clus.util.jeans.util
A Helper Class for working with Files on the Persistent Storage.
FileUtil() - Constructor for class si.ijs.kt.clus.util.jeans.util.FileUtil
 
fillArray(int[], int) - Static method in class si.ijs.kt.clus.util.jeans.util.array.MIntArray
 
fillBeamWithPredictions(ClusBeam) - Method in class si.ijs.kt.clus.ext.beamsearch.ClusBeamModelDistance
 
fillBoolArrayNodeAndAncestors(boolean[]) - Method in class si.ijs.kt.clus.ext.hierarchical.ClassesTuple
 
fillBoolArrayNodeAndAncestors(boolean[]) - Method in class si.ijs.kt.clus.ext.hierarchical.ClassTerm
 
fillBooleanMatrixMaj(double[], boolean[], double) - Method in class si.ijs.kt.clus.ext.hierarchical.ClassHierarchy
 
fillInInduce(ClusRun, ClusNode, MultiScore) - Method in class si.ijs.kt.clus.algo.tdidt.ConstraintDFInduce
 
fillInInTree(RowData, ClusNode, ClusStatistic, ClusStatistic) - Method in class si.ijs.kt.clus.algo.tdidt.ConstraintDFInduce
 
fillInStatsAndTests(ClusNode, RowData) - Method in class si.ijs.kt.clus.algo.tdidt.ConstraintDFInduce
 
fillVectorNodeAndAncestors(double[]) - Method in class si.ijs.kt.clus.ext.hierarchical.ClassTerm
 
filterAlternativeSplits(ClusNode, RowData, RowData[]) - Method in class si.ijs.kt.clus.algo.tdidt.DepthFirstInduce
 
filterAlternativeSplits(ClusNode, RowData, RowData[]) - Method in class si.ijs.kt.clus.ext.bestfirst.BestFirstInduce
 
Fimp - Class in si.ijs.kt.clus.ext.featureRanking
 
Fimp(String) - Constructor for class si.ijs.kt.clus.ext.featureRanking.Fimp
 
Fimp(ArrayList<String>, Quadruple<String, String, String[], String[]>, ArrayList<Quadruple<Integer, String, int[], double[]>>) - Constructor for class si.ijs.kt.clus.ext.featureRanking.Fimp
 
FIMP_RELEVANCES_SIGNIFICANT_PLACES - Static variable in class si.ijs.kt.clus.ext.featureRanking.ClusFeatureRanking
 
FIMP_SEPARATOR - Static variable in class si.ijs.kt.clus.ext.featureRanking.ClusFeatureRanking
Separator that separates different blocks of columns in fimp file.
fimpTableHeader(CharSequence...) - Method in class si.ijs.kt.clus.ext.featureRanking.ClusFeatureRanking
 
fimpTableHeader(Iterable<? extends CharSequence>) - Method in class si.ijs.kt.clus.ext.featureRanking.ClusFeatureRanking
 
fimpTableRow(String, int[], double[]) - Method in class si.ijs.kt.clus.ext.featureRanking.ClusFeatureRanking
Produces a fimp table row of the form datasetIndex of the attribute, attribute name, ranks, relevances
find(DataTuple) - Method in class si.ijs.kt.clus.algo.kNN.methods.kdTree.KDNode
Find k (tree.getK) nearest neighbors for specified tuple.
findAttrType(String, boolean) - Method in class si.ijs.kt.clus.model.io.ClusTreeReader
 
findBestFTest(RowData, RowData) - Method in class si.ijs.kt.clus.algo.tdidt.tune.CDTTuneFTest
 
findBestROSParameters(RowData, RowData) - Method in class si.ijs.kt.clus.algo.rules.tune.FIREROSTune
 
findBestSize(ClusData) - Method in class si.ijs.kt.clus.algo.tdidt.tune.CDTuneSizeConstrPruning
 
findBestSupportTasks(ClusData, ClusData) - Method in class si.ijs.kt.clus.algo.tdidt.ClusSITDecisionTree
 
findBestTest(OptXValGroup) - Method in class si.ijs.kt.clus.ext.optxval.OptXValInduce
 
findBestTest(MyArray, ColTarget, ClusStatManager) - Method in class si.ijs.kt.clus.data.cols.attribute.ClusAttribute
 
findBestTest(MyArray, ColTarget, ClusStatManager) - Method in class si.ijs.kt.clus.data.cols.attribute.NominalAttribute
 
findBestTest(MyArray, ColTarget, ClusStatManager) - Method in class si.ijs.kt.clus.data.cols.attribute.NumericAttribute
 
FindBestTest - Class in si.ijs.kt.clus.algo.split
 
FindBestTest(ClusStatManager) - Constructor for class si.ijs.kt.clus.algo.split.FindBestTest
 
FindBestTest(ClusStatManager, NominalSplit) - Constructor for class si.ijs.kt.clus.algo.split.FindBestTest
 
findBestTestOV(OptXValGroup) - Method in class si.ijs.kt.clus.ext.optxval.OptXValIndOV
Deprecated.
 
FindBestTestRules - Class in si.ijs.kt.clus.algo.rules
 
FindBestTestRules(ClusStatManager) - Constructor for class si.ijs.kt.clus.algo.rules.FindBestTestRules
 
FindBestTestRules(ClusStatManager, NominalSplit) - Constructor for class si.ijs.kt.clus.algo.rules.FindBestTestRules
 
FindBestTests - Class in si.ijs.kt.clus.ext.optiontree
 
FindBestTests(ClusStatManager) - Constructor for class si.ijs.kt.clus.ext.optiontree.FindBestTests
 
FindBestTests(ClusStatManager, NominalSplit) - Constructor for class si.ijs.kt.clus.ext.optiontree.FindBestTests
 
FindBestTests.HeuristicComparator - Class in si.ijs.kt.clus.ext.optiontree
 
findCycle() - Method in class si.ijs.kt.clus.ext.hierarchical.ClassHierarchy
 
findCycleRecursive(ClassTerm, char[], ClassTerm[], boolean[]) - Method in class si.ijs.kt.clus.ext.hierarchical.ClassHierarchy
 
findDistanceToFirstNotUnlabeledNeighbour(int) - Method in class si.ijs.kt.clus.ext.featureRanking.relief.ClusReliefFeatureRanking
 
findExtraTreeSplit(CurrentBestTestAndHeuristic, NominalAttrType, Random) - Method in class si.ijs.kt.clus.algo.split.NArySplit
 
findExtraTreeSplit(CurrentBestTestAndHeuristic, NominalAttrType, Random) - Method in class si.ijs.kt.clus.algo.split.NominalSplit
 
findExtraTreeSplit(CurrentBestTestAndHeuristic, NominalAttrType, Random) - Method in class si.ijs.kt.clus.algo.split.SubsetSplit
 
findNearestNeighbours(int, int) - Method in class si.ijs.kt.clus.ext.featureRanking.relief.ClusReliefFeatureRanking
Deprecated.
findNearestNeighbours(int, ArrayList<Integer>) - Method in class si.ijs.kt.clus.ext.featureRanking.relief.ClusReliefFeatureRanking
 
FindNeighboursCallable - Class in si.ijs.kt.clus.ext.featureRanking.relief.nearestNeighbour
 
FindNeighboursCallable(ClusReliefFeatureRanking, int, ArrayList<Integer>) - Constructor for class si.ijs.kt.clus.ext.featureRanking.relief.nearestNeighbour.FindNeighboursCallable
 
findNominal(NominalAttrType, RowData) - Method in class si.ijs.kt.clus.algo.rules.FindBestTestRules
Generate nominal split value and rule (and inverse '<=') for that.
findNominal(NominalAttrType, RowData, ArrayList<ILevelConstraint>) - Method in class si.ijs.kt.clus.algo.rules.ClusRuleConstraintInduce
 
findNominal(NominalAttrType, RowData, ClusRandomNonstatic) - Method in class si.ijs.kt.clus.algo.split.FindBestTest
 
findNominal(NominalAttrType, OptXValGroup) - Method in class si.ijs.kt.clus.ext.optxval.OptXValInduce
 
findNominalExtraTree(NominalAttrType, RowData, ClusRandomNonstatic) - Method in class si.ijs.kt.clus.algo.split.FindBestTest
 
findNominalOV(NominalAttrType, OptXValGroup) - Method in class si.ijs.kt.clus.ext.optxval.OptXValIndOV
Deprecated.
 
findNominalRandom(NominalAttrType, RowData, Random) - Method in class si.ijs.kt.clus.algo.rules.FindBestTestRules
Randomly generates nominal split
findNumeric(NumericAttrType, RowData) - Method in class si.ijs.kt.clus.algo.rules.FindBestTestRules
Generate numeric split value and rule (and inverse '<=') for that.
findNumeric(NumericAttrType, RowData, ArrayList<ILevelConstraint>, ClusRule, int) - Method in class si.ijs.kt.clus.algo.rules.ClusRuleConstraintInduce
 
findNumeric(NumericAttrType, RowData, ClusRandomNonstatic) - Method in class si.ijs.kt.clus.algo.split.FindBestTest
 
findNumeric(NumericAttrType, OptXValGroup) - Method in class si.ijs.kt.clus.ext.optxval.OptXValInduce
 
findNumericConstraints(NumericAttrType, ClusNode, boolean, double, int, int, int[]) - Method in class si.ijs.kt.clus.ext.ilevelc.ILevelCInduce
 
findNumericExtraTree(NumericAttrType, RowData, ClusRandomNonstatic) - Method in class si.ijs.kt.clus.algo.split.FindBestTest
 
findNumericOV(NumericAttrType, OptXValGroup) - Method in class si.ijs.kt.clus.ext.optxval.OptXValIndOV
Deprecated.
 
findNumericRandom(NumericAttrType, RowData, RowData, Random) - Method in class si.ijs.kt.clus.algo.rules.FindBestTestRules
Randomly generates numeric split value.
findOptimalSize(ArrayList<SingleStatList>, boolean) - Method in class si.ijs.kt.clus.algo.tdidt.tune.CDTuneSizeConstrPruning
 
findRandomPertSplit(CurrentBestTestAndHeuristic, NominalAttrType, Random, int, int) - Method in class si.ijs.kt.clus.algo.split.SubsetSplit
 
findRandomSplit(CurrentBestTestAndHeuristic, NominalAttrType, Random) - Method in class si.ijs.kt.clus.algo.split.NArySplit
 
findRandomSplit(CurrentBestTestAndHeuristic, NominalAttrType, Random) - Method in class si.ijs.kt.clus.algo.split.NominalSplit
 
findRandomSplit(CurrentBestTestAndHeuristic, NominalAttrType, Random) - Method in class si.ijs.kt.clus.algo.split.SubsetSplit
 
findSet(int) - Method in class si.ijs.kt.clus.util.jeans.util.DisjointSetForest
 
findSplit(CurrentBestTestAndHeuristic, NominalAttrType) - Method in class si.ijs.kt.clus.algo.split.NArySplit
 
findSplit(CurrentBestTestAndHeuristic, NominalAttrType) - Method in class si.ijs.kt.clus.algo.split.NominalSplit
 
findSplit(CurrentBestTestAndHeuristic, NominalAttrType) - Method in class si.ijs.kt.clus.algo.split.SubsetSplit
 
findSplit(MyArray, ClusStatManager) - Method in class si.ijs.kt.clus.data.cols.attribute.NominalAttribute
 
findTupleByKey(String) - Method in class si.ijs.kt.clus.data.rows.RowData
 
fine() - Static method in class si.ijs.kt.clus.util.ClusLogger
 
fine(String) - Static method in class si.ijs.kt.clus.util.ClusLogger
 
finer(String) - Static method in class si.ijs.kt.clus.util.ClusLogger
 
FIREROSTune - Class in si.ijs.kt.clus.algo.rules.tune
 
FIREROSTune(ClusInductionAlgorithmType) - Constructor for class si.ijs.kt.clus.algo.rules.tune.FIREROSTune
 
FIREROSTune(ClusInductionAlgorithmType, String[]) - Constructor for class si.ijs.kt.clus.algo.rules.tune.FIREROSTune
 
FixedSubspaces - Enum constant in enum class si.ijs.kt.clus.main.settings.section.SettingsEnsemble.EnsembleROSAlgorithmType
Algorithm generates fixed subspaces before learning and uses them.
FlatClassesAttrType - Class in si.ijs.kt.clus.data.type.hierarchies
 
FlatClassesAttrType(String, ClassesAttrType) - Constructor for class si.ijs.kt.clus.data.type.hierarchies.FlatClassesAttrType
 
FlatClassesAttrType.MySerializable - Class in si.ijs.kt.clus.data.type.hierarchies
 
FLOAT - Static variable in class si.ijs.kt.clus.util.jeans.util.MSStringTokenizer
 
flushWriter() - Method in class si.ijs.kt.clus.model.processor.ClusModelProcessor
 
flushWriter() - Method in class si.ijs.kt.clus.model.processor.ModelProcessorCollection
 
flushWriter() - Method in class si.ijs.kt.clus.model.processor.PredictionWriter
 
foldSetIntersects(DataTuple, int[]) - Method in class si.ijs.kt.clus.ext.optxval.SoftNumericTest
 
foldSetIntersects2(DataTuple, int[]) - Method in class si.ijs.kt.clus.ext.optxval.SoftNumericTest
 
For(Iterable<T>, Parallel.Operation<T>) - Static method in class si.ijs.kt.clus.algo.rules.probabilistic.Parallel
 
format(double) - Method in class si.ijs.kt.clus.util.format.ClusNumberFormat
 
format(int) - Method in class si.ijs.kt.clus.util.format.ClusNumberFormat
 
format(long) - Method in class si.ijs.kt.clus.util.format.ClusNumberFormat
 
formatInvalid(INIFileEntry, Object) - Static method in class si.ijs.kt.clus.main.settings.SettingsBase
Convenience method for denoting illegal settings
formatInvalid(INIFileEntry, Object, String) - Static method in class si.ijs.kt.clus.main.settings.SettingsBase
Convenience method for denoting illegal settings
FOUR_AFTER_DOT - Static variable in class si.ijs.kt.clus.util.format.ClusFormat
 
FOUR_ONES - Static variable in class si.ijs.kt.clus.main.settings.SettingsBase
 
freeLabel(ClusNode, int) - Method in class si.ijs.kt.clus.ext.ilevelc.ILevelCInduce
 
fromArray(double[]) - Method in class si.ijs.kt.clus.util.jeans.io.ini.INIFileArray
 
fromArray(int[]) - Method in class si.ijs.kt.clus.util.jeans.io.ini.INIFileArray
 
fromArray(String[]) - Method in class si.ijs.kt.clus.util.jeans.io.ini.INIFileArray
 
fromPath(int[], int) - Method in class si.ijs.kt.clus.util.jeans.tree.MyNode
 
ftest(int, double, double, int) - Static method in class si.ijs.kt.clus.util.FTest
 
FTest - Class in si.ijs.kt.clus.util
 
FTest() - Constructor for class si.ijs.kt.clus.util.FTest
 
FTEST_LEVEL - Static variable in class si.ijs.kt.clus.main.settings.section.SettingsTree
 
FTEST_LIMIT - Static variable in class si.ijs.kt.clus.util.FTest
 
FTEST_SIG - Static variable in class si.ijs.kt.clus.util.FTest
 
FTEST_VALUE - Static variable in class si.ijs.kt.clus.main.settings.section.SettingsTree
 
FTEST_VALUE - Static variable in class si.ijs.kt.clus.util.FTest
 
fullGradientComputation(ArrayList<Double>) - Method in class si.ijs.kt.clus.util.tools.optimization.gd.GDProblem
Compute the gradients for weights from scratch
Function - Enum constant in enum class si.ijs.kt.clus.main.settings.section.SettingsOutput.PythonModelType
 
functionGamma(double) - Method in class si.ijs.kt.clus.heuristic.EncodingCost
 
functionLogZ(double[]) - Method in class si.ijs.kt.clus.heuristic.EncodingCost
 
functionZ(double[], int, int) - Method in class si.ijs.kt.clus.heuristic.EncodingCost
 
functionZAlternative(double[]) - Method in class si.ijs.kt.clus.heuristic.EncodingCost
 

G

Gain - Enum constant in enum class si.ijs.kt.clus.main.settings.section.SettingsTree.Heuristic
 
GainHeuristic - Class in si.ijs.kt.clus.heuristic
 
GainHeuristic(boolean, ClusAttributeWeights, Settings) - Constructor for class si.ijs.kt.clus.heuristic.GainHeuristic
 
GainRatio - Enum constant in enum class si.ijs.kt.clus.main.settings.section.SettingsTree.Heuristic
 
Garofalakis - Enum constant in enum class si.ijs.kt.clus.main.settings.section.SettingsTree.PruningMethod
 
GarofalakisVSB - Enum constant in enum class si.ijs.kt.clus.main.settings.section.SettingsTree.PruningMethod
 
Gaussian - Enum constant in enum class si.ijs.kt.clus.main.settings.section.SettingsTree.SpatialMatrixType
 
GDAlgorithm - Class in si.ijs.kt.clus.util.tools.optimization.gd
Class for gradient descent optimization.
GDAlgorithm(ClusStatManager, OptimizationProblem.OptimizationParameter, ClusRuleSet) - Constructor for class si.ijs.kt.clus.util.tools.optimization.gd.GDAlgorithm
Constructor for classification and regression optimization.
GDOptimized - Enum constant in enum class si.ijs.kt.clus.main.settings.section.SettingsRules.RulePredictionMethod
Gradient descent optimization of rule weights
GDOptimizedBinary - Enum constant in enum class si.ijs.kt.clus.main.settings.section.SettingsRules.RulePredictionMethod
Use external binary file for gradient descent optimization of rule weights
GDProblem - Class in si.ijs.kt.clus.util.tools.optimization.gd
Class representing a gradient descent optimization problem.
GDProblem(ClusStatManager, OptimizationProblem.OptimizationParameter, ClusRuleSet) - Constructor for class si.ijs.kt.clus.util.tools.optimization.gd.GDProblem
Constructor for problem to be solved with gradient descent.
General - Enum constant in enum class si.ijs.kt.clus.Clus.DebugType
 
GeneralException - Exception Class in si.ijs.kt.clus.util.jeans.util
 
GeneralException(String) - Constructor for exception class si.ijs.kt.clus.util.jeans.util.GeneralException
 
generateAndSetClusterIDs(ArrayList<ClusNode>) - Method in class si.ijs.kt.clus.heuristic.EncodingCost
 
GenerateData - Class in si.ijs.kt.clus.util.tools.hier
Deprecated.
GenerateData() - Constructor for class si.ijs.kt.clus.util.tools.hier.GenerateData
Deprecated.
 
generateElement() - Method in class si.ijs.kt.clus.util.jeans.util.EnumerationGenerator
 
generateMatrix(RowData) - Method in class si.ijs.kt.clus.heuristic.VarianceReductionHeuristicCompatibility
 
generateMatrix(RowData, Integer[]) - Method in class si.ijs.kt.clus.heuristic.GISHeuristic
 
generateSubspace(ClusSchema, int, SettingsEnsemble.EnsembleROSAlgorithmType, int) - Static method in class si.ijs.kt.clus.ext.ensemble.ros.ClusROSHelpers
 
GeneticDistance - Enum constant in enum class si.ijs.kt.clus.main.settings.section.SettingsTree.Heuristic
 
GeneticDistanceHeuristic - Class in si.ijs.kt.clus.heuristic
 
GeneticDistanceHeuristic(Settings) - Constructor for class si.ijs.kt.clus.heuristic.GeneticDistanceHeuristic
 
GeneticDistanceHeuristicMatrix - Class in si.ijs.kt.clus.heuristic
 
GeneticDistanceHeuristicMatrix(Settings) - Constructor for class si.ijs.kt.clus.heuristic.GeneticDistanceHeuristicMatrix
 
GeneticDistanceStat - Class in si.ijs.kt.clus.statistic
 
GeneticDistanceStat(Settings, NominalAttrType[]) - Constructor for class si.ijs.kt.clus.statistic.GeneticDistanceStat
Constructor for this class.
GeneticSearch - Class in si.ijs.kt.clus.addon.sit.searchAlgorithm
 
GeneticSearch() - Constructor for class si.ijs.kt.clus.addon.sit.searchAlgorithm.GeneticSearch
 
Genie3 - Enum constant in enum class si.ijs.kt.clus.main.settings.section.SettingsEnsemble.EnsembleRanking
 
get(int) - Method in class si.ijs.kt.clus.error.BinaryPredictionList
 
get(int, int) - Method in class si.ijs.kt.clus.util.jeans.math.matrix.MMatrix
 
get(int, int) - Method in class si.ijs.kt.clus.util.jeans.math.matrix.MSymMatrix
 
get(String) - Method in class si.ijs.kt.clus.ext.constraint.ClusConstraintFile
 
get(String) - Method in class si.ijs.kt.clus.util.jeans.util.array.StringTable
 
get_accuracy() - Method in class si.ijs.kt.clus.error.common.ClusError
 
get_accuracy() - Method in class si.ijs.kt.clus.error.ContingencyTable
 
get_auc() - Method in class si.ijs.kt.clus.error.common.ClusError
 
get_auc() - Method in class si.ijs.kt.clus.error.ContingencyTable
 
get_error_classif() - Method in class si.ijs.kt.clus.error.common.ClusError
 
get_error_classif() - Method in class si.ijs.kt.clus.error.ContingencyTable
 
get_fast(int, int) - Method in class si.ijs.kt.clus.util.jeans.math.matrix.MSymMatrix
 
get_itemsetcpt() - Static method in class si.ijs.kt.clus.main.Global
 
get_precision() - Method in class si.ijs.kt.clus.error.common.ClusError
 
get_precision() - Method in class si.ijs.kt.clus.error.ContingencyTable
 
get_recall() - Method in class si.ijs.kt.clus.error.common.ClusError
 
get_recall() - Method in class si.ijs.kt.clus.error.ContingencyTable
 
get_TP() - Method in class si.ijs.kt.clus.error.ContingencyTable
 
get_treecpt() - Static method in class si.ijs.kt.clus.main.Global
 
get1SERule() - Method in class si.ijs.kt.clus.main.settings.section.SettingsTree
 
getAbsoluteDistance(DataTuple, ClusAttributeWeights) - Method in class si.ijs.kt.clus.ext.structuredTypes.SetStatistic
 
getAbsoluteDistance(DataTuple, ClusAttributeWeights) - Method in class si.ijs.kt.clus.ext.structuredTypes.TupleStatistic
 
getAbsoluteDistance(DataTuple, ClusAttributeWeights) - Method in class si.ijs.kt.clus.ext.timeseries.TimeSeriesStat
 
getAbsoluteDistance(DataTuple, ClusAttributeWeights) - Method in class si.ijs.kt.clus.statistic.ClusStatistic
 
getAbsoluteDistance(DataTuple, ClusAttributeWeights, ClusStatManager) - Method in class si.ijs.kt.clus.statistic.WHTDStatistic
 
getAbundance() - Method in class si.ijs.kt.clus.ext.hierarchical.ClassesValue
 
getAccuracy() - Method in class si.ijs.kt.clus.error.hmlc.HierLevelAccuracy
 
getAccuracy(int) - Method in class si.ijs.kt.clus.error.Accuracy
 
getAdditionalInfo() - Method in class si.ijs.kt.clus.error.common.ClusError
 
getAdditionalInfoFormatted() - Method in class si.ijs.kt.clus.error.common.ClusError
 
getAdditiveError() - Method in class si.ijs.kt.clus.pruning.SizeConstraintPruning
 
getAddModelProcessors(int) - Method in class si.ijs.kt.clus.model.ClusModelInfo
 
getAirbagTrails() - Method in class si.ijs.kt.clus.main.settings.section.SettingsSSL
 
getAllAncestors(boolean) - Method in class si.ijs.kt.clus.ext.hierarchical.ClassTerm
Returns all non-root parents of the given term.
getAllAttrUse(ClusAttrType.AttributeUseType) - Method in class si.ijs.kt.clus.data.ClusSchema
 
getAllModelsMI() - Method in class si.ijs.kt.clus.main.ClusModelInfoList
 
getAllParentChildTuples() - Method in class si.ijs.kt.clus.ext.hierarchical.ClassHierarchy
 
getAllPaths() - Method in class si.ijs.kt.clus.ext.hierarchical.ClassHierarchy
 
getAllValues() - Method in class si.ijs.kt.clus.util.jeans.io.range.NominalType
 
getAlternativeBest() - Method in class si.ijs.kt.clus.algo.split.CurrentBestTestAndHeuristic
 
getAlternatives() - Method in class si.ijs.kt.clus.algo.tdidt.ClusNode
 
getAminoKimuraDistance(String[], String[]) - Method in class si.ijs.kt.clus.heuristic.GeneticDistanceHeuristic
 
getAnObject() - Method in class si.ijs.kt.clus.ext.beamsearch.ClusBeamTreeElem
 
getAnObject() - Method in class si.ijs.kt.clus.ext.beamsearch.ClusBeamTreeElemOld
 
getAppName() - Method in class si.ijs.kt.clus.Clus
 
getAppName() - Method in class si.ijs.kt.clus.main.settings.section.SettingsGeneric
 
getAppNameWithSuffix() - Method in class si.ijs.kt.clus.main.settings.section.SettingsGeneric
 
getAppropriateWeight(ClusRule) - Method in class si.ijs.kt.clus.algo.rules.ClusRuleSet
 
getAreaPR() - Method in class si.ijs.kt.clus.error.ROCAndPRCurve
 
getAreaROC() - Method in class si.ijs.kt.clus.error.ROCAndPRCurve
 
getArray() - Method in class si.ijs.kt.clus.util.jeans.util.array.MIntArray
 
getArrayIndex() - Method in class si.ijs.kt.clus.data.type.ClusAttrType
 
getArrayIndexNamesString() - Method in class si.ijs.kt.clus.util.jeans.io.ini.INIFileNominalOrDoubleOrVector
 
getArrayOfDoubles(String) - Static method in class si.ijs.kt.clus.ext.featureRanking.Fimp
Converts, e.g., "[1.1, 2.1, 3.2]" to [1.1, 2.1, 3.2].
getArrayOfInts(String) - Static method in class si.ijs.kt.clus.ext.featureRanking.Fimp
Converts, e.g., "[1, 2, 3]" to [1, 2, 3].
getArrayOfSecond(DoublesPair[]) - Static method in class si.ijs.kt.clus.ext.semisupervised.Helper
Return array containing just the second values of the DoublePairs array
getArrayOfStatistic() - Method in class si.ijs.kt.clus.error.common.multiscore.MultiScoreStat
 
getArrayOfStatistic() - Method in class si.ijs.kt.clus.statistic.BitVectorStat
 
getArrayOfStatistic() - Method in class si.ijs.kt.clus.statistic.ClassificationStat
 
getArrayOfStatistic() - Method in class si.ijs.kt.clus.statistic.ClusStatistic
 
getArrayOfStatistic() - Method in class si.ijs.kt.clus.statistic.CombStat
 
getArrayOfStatistic() - Method in class si.ijs.kt.clus.statistic.CombStatClassRegHier
 
getArrayOfStatistic() - Method in class si.ijs.kt.clus.statistic.RegressionStatBase
 
getArrayOfStatisticExtended() - Method in class si.ijs.kt.clus.statistic.WHTDStatistic
 
getArrayOfStatisticExtended(boolean) - Method in class si.ijs.kt.clus.statistic.ClassificationStat
 
getAttr() - Method in class si.ijs.kt.clus.data.ClusSchema
 
getAttr(int) - Method in class si.ijs.kt.clus.error.common.ClusNominalError
 
getAttr(int) - Method in class si.ijs.kt.clus.error.common.ClusNumericError
 
getAttr(int) - Method in class si.ijs.kt.clus.error.common.ClusSetError
 
getAttrHeuristicString() - Method in class si.ijs.kt.clus.ext.beamsearch.ClusBeamHeuristic
 
getAttrib(int) - Method in class si.ijs.kt.clus.algo.kNN.distance.valentin.VectorDistance
Returns index'th attribute.
getAttribute() - Method in class si.ijs.kt.clus.ext.structuredTypes.SetStatistic
 
getAttribute() - Method in class si.ijs.kt.clus.ext.structuredTypes.TupleStatistic
 
getAttribute() - Method in class si.ijs.kt.clus.ext.timeseries.TimeSeriesStat
 
getAttribute() - Method in class si.ijs.kt.clus.main.settings.Settings
 
getAttribute(int) - Method in class si.ijs.kt.clus.data.io.ClusView
 
getAttribute(int) - Method in class si.ijs.kt.clus.statistic.ClassificationStat
Returns the nominal attribute.
getAttribute(int) - Method in class si.ijs.kt.clus.statistic.RegressionStatBase
 
getAttributeIndices() - Method in class si.ijs.kt.clus.data.rows.SparseDataTuple
 
getAttributeIndicesSet() - Method in class si.ijs.kt.clus.data.rows.SparseDataTuple
 
getAttributeInfo(String) - Method in class si.ijs.kt.clus.ext.featureRanking.ClusFeatureRanking
 
getAttributeJSON() - Method in class si.ijs.kt.clus.data.type.ClusAttrType
 
getAttributeRelevance(String, int) - Method in class si.ijs.kt.clus.ext.featureRanking.ClusFeatureRanking
 
getAttributes() - Method in class si.ijs.kt.clus.statistic.ClassificationStat
 
getAttributes() - Method in class si.ijs.kt.clus.statistic.RegressionStatBase
 
getAttributeType() - Method in class si.ijs.kt.clus.data.type.ClusAttrType
 
getAttributeType() - Method in class si.ijs.kt.clus.data.type.complex.SetAttrType
 
getAttributeType() - Method in class si.ijs.kt.clus.data.type.complex.TupleAttrType
 
getAttributeType() - Method in class si.ijs.kt.clus.data.type.hierarchies.ClassesAttrType
 
getAttributeType() - Method in class si.ijs.kt.clus.data.type.primitive.IndexAttrType
 
getAttributeType() - Method in class si.ijs.kt.clus.data.type.primitive.IntegerAttrType
 
getAttributeType() - Method in class si.ijs.kt.clus.data.type.primitive.NominalAttrType
 
getAttributeType() - Method in class si.ijs.kt.clus.data.type.primitive.NumericAttrType
 
getAttributeType() - Method in class si.ijs.kt.clus.data.type.primitive.StringAttrType
 
getAttributeType() - Method in class si.ijs.kt.clus.data.type.primitive.TimeSeriesAttrType
 
getAttrIndex() - Method in class si.ijs.kt.clus.model.test.ClusRuleConstraintInduceTest
 
getAttrIndex() - Method in class si.ijs.kt.clus.model.test.NumericTest
 
getAttrType(int) - Method in class si.ijs.kt.clus.data.ClusSchema
 
getAttrType(String) - Method in class si.ijs.kt.clus.data.ClusSchema
 
getAverage(ArrayList<Double>) - Static method in class si.ijs.kt.clus.ext.beamsearch.ClusBeamSimilarityOutput
 
getAverageNumberOfTargetsUsed() - Method in class si.ijs.kt.clus.ext.ensemble.ros.ClusEnsembleROSInfo
 
getAverageNumberOfTargetsUsedInfo() - Method in class si.ijs.kt.clus.ext.ensemble.ros.ClusEnsembleROSInfo
 
getAverageNumberOfTargetsUsedInfo() - Method in class si.ijs.kt.clus.ext.ensemble.ros.ClusROSForestInfo
 
getAvgPWDistanceBetween(int[], int[]) - Method in class si.ijs.kt.clus.heuristic.GeneticDistanceHeuristicMatrix
 
getAvgPWDistancesWithin(int[]) - Method in class si.ijs.kt.clus.heuristic.GeneticDistanceHeuristicMatrix
 
getAvgRankCorr() - Method in class si.ijs.kt.clus.error.SpearmanRankCorrelationPerExample
Gives the average (=arithmetic mean) spearman rank correlation over all examples.
getBaggingSets() - Method in class si.ijs.kt.clus.main.settings.section.SettingsExperimental
 
getBagSelection() - Method in class si.ijs.kt.clus.main.settings.section.SettingsEnsemble
 
getBandwidth() - Method in class si.ijs.kt.clus.main.settings.section.SettingsTree
 
getBasicDistance() - Method in class si.ijs.kt.clus.distance.ClusDistance
 
getBasicDistance() - Method in class si.ijs.kt.clus.distance.primitive.SearchDistance
 
getBasicDistance(DataTuple, DataTuple) - Method in class si.ijs.kt.clus.data.type.ClusAttrType
Returns the distance between the 2 given tuples for this attribute.
getBeam() - Method in class si.ijs.kt.clus.ext.beamsearch.ClusBeamSearch
 
getBeam() - Method in class si.ijs.kt.clus.ext.exhaustivesearch.ClusExhaustiveSearch
 
getBeamAttrHeuristic() - Method in class si.ijs.kt.clus.main.settings.section.SettingsBeamSearch
 
getBeamBestN() - Method in class si.ijs.kt.clus.main.settings.section.SettingsBeamSearch
 
getBeamConstraintFile() - Method in class si.ijs.kt.clus.main.settings.section.SettingsBeamSearch
 
getBeamRemoveEqualHeur() - Method in class si.ijs.kt.clus.main.settings.section.SettingsBeamSearch
 
getBeamSearch() - Method in class si.ijs.kt.clus.main.settings.Settings
 
getBeamSimilarity() - Method in class si.ijs.kt.clus.ext.beamsearch.ClusBeam
 
getBeamSimilarity() - Method in class si.ijs.kt.clus.main.settings.section.SettingsBeamSearch
 
getBeamSortOnTrainParameter() - Method in class si.ijs.kt.clus.main.settings.section.SettingsBeamSearch
 
getBeamTreeMaxSize() - Method in class si.ijs.kt.clus.main.settings.section.SettingsBeamSearch
 
getBeamWidth() - Method in class si.ijs.kt.clus.main.settings.section.SettingsBeamSearch
 
getBestAndSmallestModel() - Method in class si.ijs.kt.clus.ext.beamsearch.ClusBeam
 
getBestFitness() - Method in class si.ijs.kt.clus.util.tools.optimization.gd.GDAlgorithm
 
getBestFitness() - Method in class si.ijs.kt.clus.util.tools.optimization.gd.GDProblem
Returns best fitness so far.
getBestModel() - Method in class si.ijs.kt.clus.ext.beamsearch.ClusBeam
 
getBestTest() - Method in class si.ijs.kt.clus.algo.split.FindBestTest
 
getBestTest() - Method in class si.ijs.kt.clus.algo.tdidt.DepthFirstInduce
 
getBestTest() - Method in class si.ijs.kt.clus.ext.bestfirst.BestFirstInduce
 
getBestTest() - Method in class si.ijs.kt.clus.ext.optiontree.FindBestTests
 
getBestTests() - Method in class si.ijs.kt.clus.ext.beamsearch.ClusBeamAttrSelector
 
getBestTests(int) - Method in class si.ijs.kt.clus.ext.optiontree.FindBestTests
 
getBestTupleMaj(double[], double) - Method in class si.ijs.kt.clus.ext.hierarchical.ClassHierarchy
 
getBestTupleMajNoParents(double[], double) - Method in class si.ijs.kt.clus.ext.hierarchical.ClassHierarchy
 
getBetaI(int) - Method in class si.ijs.kt.clus.ext.ensemble.ClusBoostingForest
 
getBit(int) - Method in class si.ijs.kt.clus.util.jeans.list.BitList
 
getBitPosition() - Method in class si.ijs.kt.clus.data.type.BitwiseNominalAttrType
 
getBits() - Method in class si.ijs.kt.clus.statistic.GeneticDistanceStat
 
getBoolean() - Method in class si.ijs.kt.clus.util.jeans.util.compound.DoubleBoolean
 
getBoolean(String) - Static method in class si.ijs.kt.clus.util.jeans.util.StringUtils
 
getBound() - Method in class si.ijs.kt.clus.model.test.ClusRuleConstraintInduceTest
 
getBound() - Method in class si.ijs.kt.clus.model.test.NumericTest
 
getBounds() - Method in class si.ijs.kt.clus.algo.kNN.methods.vpTree.VPNode
 
getBranchLabel(int) - Method in class si.ijs.kt.clus.model.test.NodeTest
 
getBranchLabel(int) - Method in class si.ijs.kt.clus.model.test.NominalTest
 
getBranchString(int) - Method in class si.ijs.kt.clus.model.test.NodeTest
 
getBranchString(int) - Method in class si.ijs.kt.clus.model.test.NominalTest
 
getBranchTest(int) - Method in class si.ijs.kt.clus.model.test.InverseNumericTest
 
getBranchTest(int) - Method in class si.ijs.kt.clus.model.test.NodeTest
 
getBranchTest(int) - Method in class si.ijs.kt.clus.model.test.NominalTest
 
getBranchTest(int) - Method in class si.ijs.kt.clus.model.test.NumericTest
 
getBranchTest(int) - Method in class si.ijs.kt.clus.model.test.SubsetTest
 
getByName(String) - Method in class si.ijs.kt.clus.ext.hierarchical.ClassTerm
 
getCalcItotal() - Method in class si.ijs.kt.clus.statistic.ClassificationStat
 
getCalcItotal() - Method in class si.ijs.kt.clus.statistic.RegressionStat
 
getCandidate(int) - Method in class si.ijs.kt.clus.util.tools.optimization.de.DEPopulation
Create a new candidate rule out of parent gene.
getCardinality(double) - Method in class si.ijs.kt.clus.ext.hierarchical.thresholdcalibration.calibrateByLabelCardinality
 
getCardinality(Set) - Static method in class si.ijs.kt.clus.ext.structuredTypes.SetOperations
 
getCargo() - Method in class si.ijs.kt.clus.util.jeans.tree.BinaryNode
 
getCenter() - Method in class si.ijs.kt.clus.ext.ilevelc.COPKMeansCluster
 
getCharToken() - Method in class si.ijs.kt.clus.util.jeans.util.MStreamTokenizer
 
getCharTokens() - Method in class si.ijs.kt.clus.util.jeans.util.MStreamTokenizer
 
getCharTokens() - Method in class si.ijs.kt.clus.util.jeans.util.MStringTokenizer
 
getCharTokens() - Method in class si.ijs.kt.clus.util.jeans.util.MTokenizer
 
getChild(int) - Method in class si.ijs.kt.clus.ext.hierarchical.ClassTerm
 
getChild(int) - Method in class si.ijs.kt.clus.ext.optiontree.MyNode
 
getChild(int) - Method in interface si.ijs.kt.clus.ext.optiontree.Node
 
getChild(int) - Method in class si.ijs.kt.clus.util.jeans.tree.BinaryNode
 
getChild(int) - Method in class si.ijs.kt.clus.util.jeans.tree.MyNode
 
getChild(int) - Method in interface si.ijs.kt.clus.util.jeans.tree.Node
 
getChild(int) - Method in class si.ijs.kt.clus.util.jeans.tree.SimpleNode
 
getChild(int) - Method in class si.ijs.kt.clus.util.jeans.tree.VisitableNode
 
getChildIndex(MyNode) - Method in class si.ijs.kt.clus.ext.optiontree.MyNode
 
getChildren() - Method in class si.ijs.kt.clus.algo.tdidt.ClusNode
 
getChildren() - Method in class si.ijs.kt.clus.ext.ensemble.ros.ClusROSModelInfo
 
getChildren() - Method in class si.ijs.kt.clus.ext.hierarchicalmtr.ClusHMTRNode
 
getChildren() - Method in class si.ijs.kt.clus.ext.optiontree.ClusSplitNode
 
getChiSquareInvProb(int) - Method in class si.ijs.kt.clus.main.ClusStatManager
 
getChosenIntances() - Method in class si.ijs.kt.clus.main.settings.section.SettingsRelief
 
getChosenIntancesTest(int) - Method in class si.ijs.kt.clus.main.settings.section.SettingsKNN
 
getChosenIntancesTrain(int) - Method in class si.ijs.kt.clus.main.settings.section.SettingsKNN
 
getClass(int) - Method in class si.ijs.kt.clus.ext.hierarchical.ClassesTuple
 
getClassCounts() - Method in class si.ijs.kt.clus.statistic.ClassificationStat
Returns class counts for all targets
getClassCounts(int) - Method in class si.ijs.kt.clus.statistic.ClassificationStat
Returns class counts for given target
getClassesByLevel() - Method in class si.ijs.kt.clus.ext.hierarchical.ClassHierarchy
 
getClassID(int) - Method in class si.ijs.kt.clus.ext.hierarchical.ClassesValue
 
getClassification() - Method in class si.ijs.kt.clus.data.rows.DataTuple
 
getClassificationStat() - Method in class si.ijs.kt.clus.statistic.ClassificationStat
 
getClassificationStat() - Method in class si.ijs.kt.clus.statistic.ClusStatistic
 
getClassificationStat() - Method in class si.ijs.kt.clus.statistic.CombStat
 
getClassificationThresholds() - Method in class si.ijs.kt.clus.main.settings.section.SettingsHMLC
 
getClassifier() - Method in class si.ijs.kt.clus.Clus
 
getClassIndex(String) - Method in class si.ijs.kt.clus.addon.hmc.HMCAverageSingleClass.HMCAverageSingleClass
 
getClassIndex(ClassesValue) - Method in class si.ijs.kt.clus.ext.hierarchical.ClassHierarchy
 
getClassName(int, int) - Method in class si.ijs.kt.clus.statistic.ClassificationStat
 
getClassStr(String) - Method in class si.ijs.kt.clus.addon.hmc.HMCAverageSingleClass.HMCAverageSingleClass
 
getClassString() - Method in class si.ijs.kt.clus.statistic.ClassificationStat
 
getClassString() - Method in class si.ijs.kt.clus.statistic.ClusStatistic
 
getClassTerm(ClassesValue) - Method in class si.ijs.kt.clus.ext.hierarchical.ClassHierarchy
 
getClassTermByName(String) - Method in class si.ijs.kt.clus.ext.hierarchical.ClassHierarchy
 
getClassTermByNameAddIfNotIn(String) - Method in class si.ijs.kt.clus.ext.hierarchical.ClassHierarchy
 
getClassTermDAG(ClassesValue) - Method in class si.ijs.kt.clus.ext.hierarchical.ClassHierarchy
 
getClassTermTree(ClassesValue) - Method in class si.ijs.kt.clus.ext.hierarchical.ClassHierarchy
 
getClassValue() - Method in class si.ijs.kt.clus.addon.ILevelC.ilevelc.ILevelCGUI
 
getClassWisePredictions() - Method in class si.ijs.kt.clus.error.mlc.MLROCAndPRCurve
 
getClone(String) - Method in class si.ijs.kt.clus.ext.constraint.ClusConstraintFile
 
getClosestPoint(int, int) - Method in class si.ijs.kt.clus.addon.ILevelC.ilevelc.ILevelCGUI.ILevelCComponent
 
getClus() - Method in class si.ijs.kt.clus.addon.hmc.HMCAverageSingleClass.HMCAverageNodeWiseModels
 
getClus() - Method in class si.ijs.kt.clus.addon.hmc.HMCAverageSingleClass.HMCAverageSingleClass
 
getClus() - Method in class si.ijs.kt.clus.algo.ClusInductionAlgorithmType
 
getClusterID() - Method in class si.ijs.kt.clus.ext.ilevelc.ILevelCStatistic
 
getClustering() - Method in class si.ijs.kt.clus.data.ClusSchema
 
getClustering() - Method in class si.ijs.kt.clus.main.settings.section.SettingsAttribute
 
getClusteringAttributes() - Method in class si.ijs.kt.clus.data.ClusSchema
 
getClusteringAttributeWeights() - Method in class si.ijs.kt.clus.heuristic.ClusHeuristic
 
getClusteringStat() - Method in class si.ijs.kt.clus.algo.rules.ClusRule
 
getClusteringStat() - Method in class si.ijs.kt.clus.algo.tdidt.ClusNode
Insprectors concenring statistics
getClusteringStat() - Method in class si.ijs.kt.clus.ext.optiontree.MyNode
 
getClusteringWeights() - Method in class si.ijs.kt.clus.main.ClusStatManager
 
getClusteringWeights() - Method in class si.ijs.kt.clus.main.settings.section.SettingsAttribute
 
getClusterMode() - Method in class si.ijs.kt.clus.main.ClusStatManager
 
getCols() - Method in class si.ijs.kt.clus.util.jeans.math.matrix.MMatrix
 
getCols() - Method in class si.ijs.kt.clus.util.jeans.math.matrix.MSymMatrix
 
getComponent(int) - Method in class si.ijs.kt.clus.error.ClusSumError
 
getComponent(int) - Method in class si.ijs.kt.clus.util.jeans.util.DisjointSetForest
 
getComponentWeight(int, int) - Method in class si.ijs.kt.clus.ext.ensemble.ClusOOBWeights
 
getComposeWeight(ClusAttrType) - Method in class si.ijs.kt.clus.data.attweights.ClusNormalizedAttributeWeights
 
getConfidence(int) - Method in class si.ijs.kt.clus.ext.semisupervised.confidence.PredictionConfidence
 
getConfidenceMeasure() - Method in class si.ijs.kt.clus.main.settings.section.SettingsSSL
 
getConfidenceScores() - Method in class si.ijs.kt.clus.ext.semisupervised.confidence.PredictionConfidence
 
getConfidenceThreshold() - Method in class si.ijs.kt.clus.main.settings.section.SettingsSSL
 
getConstraintFile() - Method in class si.ijs.kt.clus.main.settings.section.SettingsConstraints
 
getConstraintPredictions() - Method in class si.ijs.kt.clus.ext.beamsearch.ClusBeamSyntacticConstraint
 
getConstraints() - Method in class si.ijs.kt.clus.algo.rules.ClusRule
 
getConstraints() - Method in class si.ijs.kt.clus.main.settings.Settings
 
getCorrelation(int) - Method in class si.ijs.kt.clus.error.PearsonCorrelation
 
getCount() - Method in class si.ijs.kt.clus.ext.beamsearch.ClusBeamTreeElem
 
getCount() - Method in class si.ijs.kt.clus.ext.beamsearch.ClusBeamTreeElemOld
 
getCount() - Method in class si.ijs.kt.clus.util.jeans.math.SingleStat
 
getCount() - Method in class si.ijs.kt.clus.util.jeans.util.compound.DoubleBooleanCount
 
getCount(int) - Method in class si.ijs.kt.clus.selection.BagSelection
 
getCount(int) - Method in class si.ijs.kt.clus.selection.OOBSelection
 
getCount(int, int) - Method in class si.ijs.kt.clus.statistic.ClassificationStat
 
getCount(int, int) - Method in class si.ijs.kt.clus.statistic.ClusStatistic
 
getCount(int, int) - Method in class si.ijs.kt.clus.statistic.GeneticDistanceStat
 
getCounter() - Method in class si.ijs.kt.clus.ext.semisupervised.confidence.PredictionConfidence
Return the number of instances for which the confidence score is != Double.NaN
getCoverage() - Method in class si.ijs.kt.clus.algo.rules.ClusRule
 
getCoverage() - Method in class si.ijs.kt.clus.error.common.ClusError
 
getCoverage() - Method in class si.ijs.kt.clus.ext.ensemble.ros.ClusEnsembleROSInfo
 
getCoverage() - Method in class si.ijs.kt.clus.ext.ensemble.ros.ClusROSForestInfo
 
getCoverageInfo() - Method in class si.ijs.kt.clus.ext.ensemble.ros.ClusEnsembleROSInfo
 
getCoverageInfo() - Method in class si.ijs.kt.clus.ext.ensemble.ros.ClusROSForestInfo
 
getCoverageNormalized() - Method in class si.ijs.kt.clus.ext.ensemble.ros.ClusEnsembleROSInfo
 
getCoverageNormalizedInfo() - Method in class si.ijs.kt.clus.ext.ensemble.ros.ClusEnsembleROSInfo
 
getCoverageNormalizedInfo() - Method in class si.ijs.kt.clus.ext.ensemble.ros.ClusROSForestInfo
 
getCoverageOpt(int) - Method in class si.ijs.kt.clus.ext.ensemble.ros.ClusEnsembleROSInfo
Used when ensembles run in optimized mode
getCoveringMethod() - Method in class si.ijs.kt.clus.main.settings.section.SettingsRules
 
getCoveringWeight() - Method in class si.ijs.kt.clus.main.settings.section.SettingsRules
 
getCovForPrediction(int) - Method in class si.ijs.kt.clus.util.tools.optimization.gd.GDProblem
 
getCPUTime() - Static method in class si.ijs.kt.clus.util.ResourceInfo
 
getCreateTestError() - Method in class si.ijs.kt.clus.model.ClusModelInfo
 
getCriticalF(int, int) - Static method in class si.ijs.kt.clus.util.FTest
 
getCriticalFCommonsMath(double, double) - Static method in class si.ijs.kt.clus.util.FTest
 
getCrValue() - Method in class si.ijs.kt.clus.data.type.primitive.IndexAttrType
 
getCrWidth() - Method in class si.ijs.kt.clus.ext.beamsearch.ClusBeam
 
getCrWidth() - Method in class si.ijs.kt.clus.ext.exhaustivesearch.ClusExhaustive
 
getCSets() - Method in class si.ijs.kt.clus.ext.ilevelc.COPKMeansModel
 
getCTParent() - Method in class si.ijs.kt.clus.ext.hierarchical.ClassTerm
 
getCTree() - Method in class si.ijs.kt.clus.ext.exhaustivesearch.ClusExhaustiveDFSearch
 
getCurrentDir() - Static method in class si.ijs.kt.clus.util.jeans.util.FileUtil
Return the current working Directory of the File SASystem.
getCurrentDirectory() - Static method in class si.ijs.kt.clus.util.jeans.util.FileUtil
 
getCurrentModel() - Method in class si.ijs.kt.clus.ext.beamsearch.ClusBeamSearch
 
getCurrentModel() - Method in class si.ijs.kt.clus.ext.exhaustivesearch.ClusExhaustiveSearch
 
getCurrentTree() - Method in class si.ijs.kt.clus.pruning.PruneTree
 
getCurveError(MLROCAndPRCurve.CurveType) - Method in class si.ijs.kt.clus.error.mlcForHmlc.MLROCAndPRCurve
 
getData() - Method in class si.ijs.kt.clus.algo.rules.ClusRule
 
getData() - Method in class si.ijs.kt.clus.Clus
 
getData() - Method in class si.ijs.kt.clus.data.rows.MemoryTupleIterator
 
getData() - Method in class si.ijs.kt.clus.data.rows.RowData
 
getData() - Method in class si.ijs.kt.clus.data.rows.TupleIterator
 
getData() - Method in class si.ijs.kt.clus.ext.beamsearch.ClusBeamAttrSelector
 
getData() - Method in class si.ijs.kt.clus.ext.featureRanking.relief.ReliefModel
 
getData() - Method in class si.ijs.kt.clus.ext.optxval.OptXValGroup
 
getData() - Method in class si.ijs.kt.clus.main.settings.Settings
 
getData() - Method in class si.ijs.kt.clus.statistic.ClassificationStat
 
getData() - Method in class si.ijs.kt.clus.statistic.RegressionStat
 
getData() - Method in class si.ijs.kt.clus.statistic.WHTDStatistic
 
getDataFile() - Method in class si.ijs.kt.clus.main.settings.section.SettingsData
 
getDataIndexesPerVal() - Method in class si.ijs.kt.clus.heuristic.rules.ClusRuleHeuristicDispersion
 
getDataSet(int) - Method in class si.ijs.kt.clus.main.ClusRun
 
getDatasetIndex() - Method in class si.ijs.kt.clus.data.rows.DataTuple
 
getDatasetIndex() - Method in class si.ijs.kt.clus.data.type.ClusAttrType
 
getDate() - Method in class si.ijs.kt.clus.main.settings.section.SettingsGeneric
 
getDebugString() - Method in class si.ijs.kt.clus.statistic.ClusStatistic
 
getDebugString() - Method in class si.ijs.kt.clus.statistic.RegressionStatBase
 
getDefault() - Method in class si.ijs.kt.clus.util.tools.manual.ManualEntry
 
getDefaultData() - Method in class si.ijs.kt.clus.algo.rules.ClusRuleSet
 
getDefaultSettings() - Static method in class si.ijs.kt.clus.main.settings.Settings
 
getDefinitionFile() - Method in class si.ijs.kt.clus.main.settings.section.SettingsHMLC
 
getDelimToken(char, char) - Method in class si.ijs.kt.clus.util.jeans.util.MStreamTokenizer
 
getDepth() - Method in class si.ijs.kt.clus.ext.ensemble.container.NodeDepthPair
 
getDepth() - Method in class si.ijs.kt.clus.ext.hierarchical.ClassHierarchy
 
getDepth() - Method in class si.ijs.kt.clus.ext.hierarchical.ClassTerm
Getter for m_Depth.
getDepth() - Method in class si.ijs.kt.clus.util.jeans.io.ini.INIFileNode
 
getDepth(String) - Static method in class si.ijs.kt.clus.ext.hierarchical.HierIO
 
getDescMean(int) - Static method in class si.ijs.kt.clus.algo.rules.RuleNormalization
 
getDescription() - Method in class si.ijs.kt.clus.util.tools.manual.ManualEntry
 
getDescriptive() - Method in class si.ijs.kt.clus.data.ClusSchema
 
getDescriptive() - Method in class si.ijs.kt.clus.main.settings.section.SettingsAttribute
 
getDescriptiveAttribute(int) - Method in class si.ijs.kt.clus.ext.featureRanking.relief.ClusReliefFeatureRanking
 
getDescriptiveAttributes() - Method in class si.ijs.kt.clus.data.ClusSchema
 
getDescriptiveAttributes() - Method in class si.ijs.kt.clus.ext.bestfirst.BestFirstInduce
 
getDescriptiveAttributes(ClusRandomNonstatic) - Method in class si.ijs.kt.clus.algo.tdidt.DepthFirstInduce
 
getDescriptiveAttributesIndices(ClusStatManager) - Static method in class si.ijs.kt.clus.util.ClusUtil
 
getDescriptiveDidstance() - Method in class si.ijs.kt.clus.ext.featureRanking.relief.nearestNeighbour.NearestNeighbour
 
getDescriptiveIndex(String) - Method in class si.ijs.kt.clus.ext.ensemble.ClusForest
 
getDescriptiveIndices() - Method in class si.ijs.kt.clus.ext.ensemble.ClusForest
 
getDescStdDev(int) - Static method in class si.ijs.kt.clus.algo.rules.RuleNormalization
 
getDetailLevel() - Method in class si.ijs.kt.clus.error.common.ClusError
 
getDifferenceCardinality(Set, Set, ClusDistance) - Static method in class si.ijs.kt.clus.ext.structuredTypes.SetOperations
 
getDimension() - Method in class si.ijs.kt.clus.error.common.ClusError
 
getDisabled() - Method in class si.ijs.kt.clus.data.ClusSchema
 
getDisabled() - Method in class si.ijs.kt.clus.main.settings.section.SettingsAttribute
 
getDiscretePred() - Method in class si.ijs.kt.clus.statistic.WHTDStatistic
 
getDispersion(ClusAttributeWeights, RowData) - Method in class si.ijs.kt.clus.ext.structuredTypes.SetStatistic
Currently only used to compute the default dispersion within rule heuristics.
getDispersion(ClusAttributeWeights, RowData) - Method in class si.ijs.kt.clus.ext.structuredTypes.TupleStatistic
Currently only used to compute the default dispersion within rule heuristics.
getDispersion(ClusAttributeWeights, RowData) - Method in class si.ijs.kt.clus.ext.timeseries.TimeSeriesStat
Currently only used to compute the default dispersion within rule heuristics.
getDispersion(ClusAttributeWeights, RowData) - Method in class si.ijs.kt.clus.statistic.ClassificationStat
Currently only used to compute the default dispersion within rule heuristics.
getDispersion(ClusAttributeWeights, RowData) - Method in class si.ijs.kt.clus.statistic.ClusStatistic
Currently only used to compute the default dispersion within rule heuristics.
getDispersion(ClusAttributeWeights, RowData) - Method in class si.ijs.kt.clus.statistic.CombStat
Currently only used to compute the default dispersion within rule heuristics.
getDispersion(ClusAttributeWeights, RowData) - Method in class si.ijs.kt.clus.statistic.RegressionStatBase
Currently only used to compute the default dispersion within rule heuristics.
getDispersion(ClusAttributeWeights, RowData) - Method in class si.ijs.kt.clus.statistic.WHTDStatistic
Used for the hierarchical rules heuristic
getDispersionString() - Method in class si.ijs.kt.clus.statistic.CombStat
 
getDispersionWeights() - Method in class si.ijs.kt.clus.main.ClusStatManager
 
getDispersionWeights() - Method in class si.ijs.kt.clus.main.settings.section.SettingsRules
 
getDist() - Method in class si.ijs.kt.clus.distance.primitive.relief.Levenshtein
 
getDistance() - Method in class si.ijs.kt.clus.algo.kNN.methods.NN
 
getDistance() - Method in class si.ijs.kt.clus.algo.kNN.methods.SearchAlgorithm
Returns distance used in search algorithm.
getDistance() - Method in class si.ijs.kt.clus.main.settings.section.SettingsKNN
 
getDistance() - Method in class si.ijs.kt.clus.statistic.ClusStatistic
 
getDistance() - Method in class si.ijs.kt.clus.statistic.SumPairwiseDistancesStat
 
getDistance(String[], String[]) - Method in class si.ijs.kt.clus.heuristic.GeneticDistanceHeuristic
 
getDistance(ArrayList<ClusStatistic>, ArrayList<ClusStatistic>) - Static method in class si.ijs.kt.clus.ext.beamsearch.ClusBeamModelDistance
 
getDistance(DataTuple, DataTuple) - Method in class si.ijs.kt.clus.algo.kNN.distance.valentin.VectorDistance
Returns the distance between the 2 given tuples
getDistance(ClusAttrType, DataTuple, DataTuple) - Method in class si.ijs.kt.clus.algo.kNN.distance.valentin.BasicDistance
Returns the distance for given tuples for given Attribute
getDistance(ClusAttrType, DataTuple, DataTuple) - Method in class si.ijs.kt.clus.algo.kNN.distance.valentin.NominalBasicDistance
Returns the distance for given tuples for given (Nominal) Attribute Require type : must be a NominalAttrType object
getDistance(ClusAttrType, DataTuple, DataTuple) - Method in class si.ijs.kt.clus.algo.kNN.distance.valentin.NumericBasicDistance
Returns the distance for given tuples for given (Numerical) Attribute Require type : must be a NumericAttrType object
getDistanceName() - Method in class si.ijs.kt.clus.distance.ClusDistance
 
getDistanceName() - Method in class si.ijs.kt.clus.distance.complex.sets.EuclideanDistance
 
getDistanceName() - Method in class si.ijs.kt.clus.distance.complex.sets.GSMDistance
 
getDistanceName() - Method in class si.ijs.kt.clus.distance.complex.sets.GSMDistanceBitVector
 
getDistanceName() - Method in class si.ijs.kt.clus.distance.complex.sets.HammingLossDistance
 
getDistanceName() - Method in class si.ijs.kt.clus.distance.complex.sets.JaccardDistance
 
getDistanceName() - Method in class si.ijs.kt.clus.distance.complex.tuples.EuclideanDistance
 
getDistanceName() - Method in class si.ijs.kt.clus.distance.complex.tuples.MinkowskiDistance
 
getDistanceName() - Method in class si.ijs.kt.clus.distance.complex.tuples.SSPDMatrix
 
getDistanceName() - Method in class si.ijs.kt.clus.distance.hierarchies.HierJaccardDistance
 
getDistanceName() - Method in class si.ijs.kt.clus.distance.primitive.ChebyshevDistance
 
getDistanceName() - Method in class si.ijs.kt.clus.distance.primitive.EuclideanDistance
 
getDistanceName() - Method in class si.ijs.kt.clus.distance.primitive.ManhattanDistance
 
getDistanceName() - Method in class si.ijs.kt.clus.distance.primitive.nominal.NominalDistance
 
getDistanceName() - Method in class si.ijs.kt.clus.distance.primitive.SearchDistance
 
getDistanceName() - Method in class si.ijs.kt.clus.distance.primitive.timeseries.DTWTimeSeriesDist
 
getDistanceName() - Method in class si.ijs.kt.clus.distance.primitive.timeseries.QDMTimeSeriesDist
 
getDistanceName() - Method in class si.ijs.kt.clus.distance.primitive.timeseries.TSCTimeSeriesDist
 
getDistanceName() - Method in class si.ijs.kt.clus.statistic.ClusStatistic
 
getDistanceName() - Method in class si.ijs.kt.clus.statistic.HierSumPairwiseDistancesStat
 
getDistanceName() - Method in class si.ijs.kt.clus.statistic.SumPairwiseDistancesStat
 
getDistanceName() - Method in class si.ijs.kt.clus.statistic.WHTDStatistic
 
getDistanceToBeam() - Method in class si.ijs.kt.clus.ext.beamsearch.ClusBeamModel
 
getDistToConstraint(ClusBeamModel, ClusBeamSyntacticConstraint) - Method in class si.ijs.kt.clus.ext.beamsearch.ClusBeamModelDistance
Dragi Calculates the distance between a given model and the syntactic constraint
getDouble() - Method in class si.ijs.kt.clus.util.jeans.io.ini.INIFileNominalOrDoubleOrVector
 
getDouble() - Method in class si.ijs.kt.clus.util.jeans.math.MDouble
 
getDouble() - Method in class si.ijs.kt.clus.util.jeans.math.MNumber
 
getDouble() - Method in class si.ijs.kt.clus.util.jeans.util.compound.DoubleBoolean
 
getDouble(int) - Method in class si.ijs.kt.clus.data.rows.RowData
 
getDouble(int) - Method in class si.ijs.kt.clus.data.rows.RowDataSortHelper
 
getDouble(int) - Method in class si.ijs.kt.clus.util.jeans.io.ini.INIFileNominalOrDoubleOrVector
 
getDouble(int) - Method in interface si.ijs.kt.clus.util.jeans.util.sort.MSortable
 
getDoubleAt(int) - Method in class si.ijs.kt.clus.util.jeans.io.ini.INIFileArray
 
getDoubles() - Method in class si.ijs.kt.clus.data.rows.DataTuple
 
getDoubleVal(int) - Method in class si.ijs.kt.clus.data.rows.DataTuple
 
getDoubleValue() - Method in class si.ijs.kt.clus.util.jeans.io.ini.INIFileStringOrDouble
 
getDoubleValueSparse(int) - Method in class si.ijs.kt.clus.data.rows.SparseDataTuple
 
getDoubleValueSparse(Integer) - Method in class si.ijs.kt.clus.data.rows.SparseDataTuple
 
getDoubleVector() - Method in class si.ijs.kt.clus.util.jeans.io.ini.INIFileNominalOrDoubleOrVector
 
getDummyAttrs() - Method in class si.ijs.kt.clus.ext.hierarchical.ClassHierarchy
 
getDumpCloned() - Method in class si.ijs.kt.clus.util.cloner.Cloner
 
getEditDistance(String[], String[]) - Method in class si.ijs.kt.clus.heuristic.GeneticDistanceHeuristic
 
getEfficiencyLevel() - Method in class si.ijs.kt.clus.statistic.SumPairwiseDistancesStat
 
getElement(int) - Method in class si.ijs.kt.clus.selection.XValGroup
 
getElementAt(int) - Method in class si.ijs.kt.clus.util.jeans.util.IntegerStack
 
getEnabledCount(int[]) - Static method in class si.ijs.kt.clus.ext.ensemble.ros.ClusEnsembleROSInfo
 
getEncodingCostValue() - Method in class si.ijs.kt.clus.heuristic.EncodingCost
 
getEncodingCostValueWithNormalizer() - Method in class si.ijs.kt.clus.heuristic.EncodingCost
 
getEnsemble() - Method in class si.ijs.kt.clus.main.settings.Settings
 
getEnsembleBagSize() - Method in class si.ijs.kt.clus.main.settings.section.SettingsEnsemble
Gets the size of bags for ensembles
getEnsembleBootstrapping() - Method in class si.ijs.kt.clus.main.settings.section.SettingsEnsemble
 
getEnsembleFeatureRanking(int, SettingsEnsemble.EnsembleRanking) - Method in class si.ijs.kt.clus.ext.ensemble.ClusEnsembleInduce
 
getEnsembleMethod() - Method in class si.ijs.kt.clus.main.settings.section.SettingsEnsemble
 
getEnsembleMethodName() - Method in class si.ijs.kt.clus.main.settings.section.SettingsEnsemble
 
getEnsemblePredictionWriter(int) - Method in class si.ijs.kt.clus.model.ClusModelInfo
 
getEnsembleROSAlgorithmType() - Method in class si.ijs.kt.clus.main.settings.section.SettingsEnsemble
 
getEnsembleROSForestInfo() - Method in class si.ijs.kt.clus.ext.ensemble.ClusForest
 
getEnsembleROSVotingType() - Method in class si.ijs.kt.clus.main.settings.section.SettingsEnsemble
 
getEnsembleVotingType() - Method in class si.ijs.kt.clus.main.settings.section.SettingsEnsemble
 
getEntropyType() - Method in class si.ijs.kt.clus.main.settings.section.SettingsTree
 
getEntry(String) - Method in class si.ijs.kt.clus.util.jeans.io.ini.INIFileSection
 
getError() - Method in class si.ijs.kt.clus.main.settings.section.SettingsSIT
 
getError() - Method in class si.ijs.kt.clus.statistic.ClusStatistic
 
getError(int) - Method in class si.ijs.kt.clus.algo.rules.ClusRule
 
getError(int) - Method in class si.ijs.kt.clus.error.common.ClusErrorList
 
getError(int) - Method in class si.ijs.kt.clus.model.ClusModelInfo
 
getError(String, String) - Method in class si.ijs.kt.clus.util.jeans.io.range.NominalType
 
getError(ClusAttributeWeights) - Method in class si.ijs.kt.clus.ext.structuredTypes.TupleStatistic
 
getError(ClusAttributeWeights) - Method in class si.ijs.kt.clus.statistic.ClassificationStat
 
getError(ClusAttributeWeights) - Method in class si.ijs.kt.clus.statistic.ClusStatistic
 
getError(ClusAttributeWeights) - Method in class si.ijs.kt.clus.statistic.CombStat
 
getError(ClusAttributeWeights) - Method in class si.ijs.kt.clus.statistic.RegressionStatBase
 
getError(ClusAttributeWeights, RowData) - Method in class si.ijs.kt.clus.statistic.ClusStatistic
 
getErrorAccuracy() - Method in class si.ijs.kt.clus.error.common.ClusErrorList
 
getErrorAuc() - Method in class si.ijs.kt.clus.error.common.ClusErrorList
 
getErrorByName(String) - Method in class si.ijs.kt.clus.error.common.ClusErrorList
 
getErrorClassif() - Method in class si.ijs.kt.clus.error.common.ClusErrorList
 
getErrorClone() - Method in class si.ijs.kt.clus.error.common.ClusError
 
getErrorClone() - Method in class si.ijs.kt.clus.error.common.ClusErrorList
 
getErrorClone(String) - Method in class si.ijs.kt.clus.error.common.ClusErrorList
 
getErrorClone(ClusErrorList) - Method in class si.ijs.kt.clus.error.AbsoluteError
 
getErrorClone(ClusErrorList) - Method in class si.ijs.kt.clus.error.Accuracy
 
getErrorClone(ClusErrorList) - Method in class si.ijs.kt.clus.error.AvgDistancesError
 
getErrorClone(ClusErrorList) - Method in class si.ijs.kt.clus.error.ClusSumError
 
getErrorClone(ClusErrorList) - Method in class si.ijs.kt.clus.error.common.ClusError
 
getErrorClone(ClusErrorList) - Method in class si.ijs.kt.clus.error.common.multiscore.MultiScoreWrapper
 
getErrorClone(ClusErrorList) - Method in class si.ijs.kt.clus.error.ContingencyTable
 
getErrorClone(ClusErrorList) - Method in class si.ijs.kt.clus.error.hmlc.HierClassWiseAccuracy
 
getErrorClone(ClusErrorList) - Method in class si.ijs.kt.clus.error.hmlc.HierErrorMeasures
 
getErrorClone(ClusErrorList) - Method in class si.ijs.kt.clus.error.hmlc.HierLevelAccuracy
 
getErrorClone(ClusErrorList) - Method in class si.ijs.kt.clus.error.hmlc.HierRMSError
 
getErrorClone(ClusErrorList) - Method in class si.ijs.kt.clus.error.ICVPairwiseDistancesError
 
getErrorClone(ClusErrorList) - Method in class si.ijs.kt.clus.error.MisclassificationError
 
getErrorClone(ClusErrorList) - Method in class si.ijs.kt.clus.error.mlc.AveragePrecision
 
getErrorClone(ClusErrorList) - Method in class si.ijs.kt.clus.error.mlc.Coverage
 
getErrorClone(ClusErrorList) - Method in class si.ijs.kt.clus.error.mlc.HammingLoss
 
getErrorClone(ClusErrorList) - Method in class si.ijs.kt.clus.error.mlc.MacroFOne
 
getErrorClone(ClusErrorList) - Method in class si.ijs.kt.clus.error.mlc.MacroPrecision
 
getErrorClone(ClusErrorList) - Method in class si.ijs.kt.clus.error.mlc.MacroRecall
 
getErrorClone(ClusErrorList) - Method in class si.ijs.kt.clus.error.mlc.MicroFOne
 
getErrorClone(ClusErrorList) - Method in class si.ijs.kt.clus.error.mlc.MicroPrecision
 
getErrorClone(ClusErrorList) - Method in class si.ijs.kt.clus.error.mlc.MicroRecall
 
getErrorClone(ClusErrorList) - Method in class si.ijs.kt.clus.error.mlc.MLAccuracy
 
getErrorClone(ClusErrorList) - Method in class si.ijs.kt.clus.error.mlc.MLaverageAUPRC
 
getErrorClone(ClusErrorList) - Method in class si.ijs.kt.clus.error.mlc.MLaverageAUROC
 
getErrorClone(ClusErrorList) - Method in class si.ijs.kt.clus.error.mlc.MLFOneMeasure
 
getErrorClone(ClusErrorList) - Method in class si.ijs.kt.clus.error.mlc.MLpooledAUPRC
 
getErrorClone(ClusErrorList) - Method in class si.ijs.kt.clus.error.mlc.MLPrecision
 
getErrorClone(ClusErrorList) - Method in class si.ijs.kt.clus.error.mlc.MLRecall
 
getErrorClone(ClusErrorList) - Method in class si.ijs.kt.clus.error.mlc.MLROCAndPRCurve
 
getErrorClone(ClusErrorList) - Method in class si.ijs.kt.clus.error.mlc.MLweightedAUPRC
 
getErrorClone(ClusErrorList) - Method in class si.ijs.kt.clus.error.mlc.OneError
 
getErrorClone(ClusErrorList) - Method in class si.ijs.kt.clus.error.mlc.RankingLoss
 
getErrorClone(ClusErrorList) - Method in class si.ijs.kt.clus.error.mlc.SubsetAccuracy
 
getErrorClone(ClusErrorList) - Method in class si.ijs.kt.clus.error.mlcForHmlc.MlcMeasuresForHmlc
 
getErrorClone(ClusErrorList) - Method in class si.ijs.kt.clus.error.MSError
 
getErrorClone(ClusErrorList) - Method in class si.ijs.kt.clus.error.MSNominalError
 
getErrorClone(ClusErrorList) - Method in class si.ijs.kt.clus.error.NominalCorrelation
 
getErrorClone(ClusErrorList) - Method in class si.ijs.kt.clus.error.PearsonCorrelation
 
getErrorClone(ClusErrorList) - Method in class si.ijs.kt.clus.error.RelativeError
 
getErrorClone(ClusErrorList) - Method in class si.ijs.kt.clus.error.RMSError
 
getErrorClone(ClusErrorList) - Method in class si.ijs.kt.clus.error.RRMSError
 
getErrorClone(ClusErrorList) - Method in class si.ijs.kt.clus.error.sets.Accuracy
 
getErrorClone(ClusErrorList) - Method in class si.ijs.kt.clus.error.sets.F1Score
 
getErrorClone(ClusErrorList) - Method in class si.ijs.kt.clus.error.sets.HammingLossError
 
getErrorClone(ClusErrorList) - Method in class si.ijs.kt.clus.error.sets.Precision
 
getErrorClone(ClusErrorList) - Method in class si.ijs.kt.clus.error.sets.Recall
 
getErrorClone(ClusErrorList) - Method in class si.ijs.kt.clus.error.sets.SubsetAccuracy
 
getErrorClone(ClusErrorList) - Method in class si.ijs.kt.clus.error.SpearmanRankCorrelation
 
getErrorClone(ClusErrorList) - Method in class si.ijs.kt.clus.error.SpearmanRankCorrelationPerExample
 
getErrorClone(ClusErrorList) - Method in class si.ijs.kt.clus.error.WAHNDError
 
getErrorClone(ClusErrorList) - Method in class si.ijs.kt.clus.ext.ilevelc.ILevelCRandIndex
 
getErrorClone(ClusErrorList) - Method in class si.ijs.kt.clus.ext.timeseries.TimeSeriesSignificantChangeTesterXVAL
 
getErrorComp(int) - Method in class si.ijs.kt.clus.error.hmlc.HierLevelAccuracy
 
getErrorDiff(ClusAttributeWeights, ClusStatistic) - Method in class si.ijs.kt.clus.statistic.ClassificationStat
 
getErrorDiff(ClusAttributeWeights, ClusStatistic) - Method in class si.ijs.kt.clus.statistic.ClusStatistic
 
getErrorDiff(ClusAttributeWeights, ClusStatistic) - Method in class si.ijs.kt.clus.statistic.RegressionStatBase
 
getErrorDiff(ClusStatistic) - Method in class si.ijs.kt.clus.statistic.ClusStatistic
 
getErrorDiffROS(ClusAttributeWeights, ClusStatistic) - Method in class si.ijs.kt.clus.statistic.ClassificationStat
 
getErrorOrNull(int) - Method in class si.ijs.kt.clus.error.common.ClusErrorList
 
getErrorPerleaf(ClusNode) - Static method in class si.ijs.kt.clus.ext.exhaustivesearch.ClusExhaustiveSearch
 
getErrorPerleaf(ClusNode, MDouble) - Static method in class si.ijs.kt.clus.ext.exhaustivesearch.ClusExhaustiveDFSearch
 
getErrorPerleaf(ClusNode, MDouble, ArrayList) - Static method in class si.ijs.kt.clus.ext.exhaustivesearch.ClusExhaustiveDFSearch
 
getErrorPrecision() - Method in class si.ijs.kt.clus.error.common.ClusErrorList
 
getErrorRecall() - Method in class si.ijs.kt.clus.error.common.ClusErrorList
 
getErrorRel() - Method in class si.ijs.kt.clus.statistic.ClassificationStat
 
getErrorRel() - Method in class si.ijs.kt.clus.statistic.ClusStatistic
 
getErrorROS(ClusAttributeWeights) - Method in class si.ijs.kt.clus.statistic.ClassificationStat
 
getEsimatedGini(int) - Method in class si.ijs.kt.clus.statistic.ClassificationStat
If there is no examples for an attribute i, gini is estimated according to setting given in settings file
getEstimatedErrors(ClusNode) - Method in class si.ijs.kt.clus.pruning.C45Pruner
 
getEstimatedErrorsForBranch(ClusNode, RowData) - Method in class si.ijs.kt.clus.pruning.C45Pruner
 
getEstimatedErrorsForDistribution(ClassificationStat) - Method in class si.ijs.kt.clus.pruning.C45Pruner
 
getEstimatedProbabilityPrediction(int) - Method in class si.ijs.kt.clus.statistic.ClassificationStat
 
getEstimatedSVarS(int) - Method in class si.ijs.kt.clus.statistic.RegressionStat
The case where are examples have missing value for the i-th attribute, i.e., variance can not be calculated, so it is estimated
getEstimatedSVarS(ClusAttributeWeights) - Method in class si.ijs.kt.clus.statistic.RegressionStatBinaryNomiss
The case where are examples have missing value for the i-th attribute, i.e., variance can not be calculated, so it is estimated
getEvalArray(int, int) - Method in class si.ijs.kt.clus.addon.hmc.HMCAverageSingleClass.HMCAverageSingleClass
 
getEvalClasses() - Method in class si.ijs.kt.clus.ext.hierarchical.ClassHierarchy
 
getEvalClassesVector() - Method in class si.ijs.kt.clus.ext.hierarchical.ClassHierarchy
 
getExamples() - Method in class si.ijs.kt.clus.data.type.primitive.SparseNumericAttrType
 
getExampleWeight() - Method in class si.ijs.kt.clus.data.type.primitive.SparseNumericAttrType
 
getExampleWeight(ArrayList) - Method in class si.ijs.kt.clus.algo.tdidt.DepthFirstInduceSparse
Deprecated.
getExampleWeight(RowData, SparseNumericAttrType) - Method in class si.ijs.kt.clus.algo.tdidt.DepthFirstInduceSparse
 
getExhaustiveSearch() - Method in class si.ijs.kt.clus.main.settings.Settings
 
getExhaustiveSearchThresholds() - Method in class si.ijs.kt.clus.main.settings.section.SettingsSSL
 
getExperimental() - Method in class si.ijs.kt.clus.main.settings.Settings
 
getExtension(File) - Static method in class si.ijs.kt.clus.util.jeans.util.FileUtil
Return the File SASystem Extension of a given File.
getExtension(String) - Static method in class si.ijs.kt.clus.util.jeans.util.FileUtil
Return the File SASystem Extension of a given (by name) File.
getExtraError(int) - Method in class si.ijs.kt.clus.model.ClusModelInfo
 
getExtraInfo() - Method in class si.ijs.kt.clus.statistic.ClusStatistic
 
getExtraInfo() - Method in class si.ijs.kt.clus.statistic.WHTDStatistic
 
getExtraInfoRec(ClassTerm, double[], StringBuffer) - Method in class si.ijs.kt.clus.statistic.WHTDStatistic
 
getFac() - Method in class si.ijs.kt.clus.distance.hierarchies.HierWeightSPath
 
getFileAbsolute(String) - Method in class si.ijs.kt.clus.main.settings.section.SettingsGeneric
 
getFileAbsoluteWriter(String) - Method in class si.ijs.kt.clus.main.settings.section.SettingsGeneric
 
getFileName() - Method in class si.ijs.kt.clus.util.jeans.util.MStreamTokenizer
 
getFileNameForErrorMsg() - Method in class si.ijs.kt.clus.util.jeans.util.MStreamTokenizer
 
getFileOpen() - Method in class si.ijs.kt.clus.addon.ILevelC.ilevelc.ILevelCGUI
 
getFimpHeader() - Method in class si.ijs.kt.clus.ext.featureRanking.Fimp
 
getFimportances() - Method in class si.ijs.kt.clus.ext.ensemble.container.OneBagResults
 
getFindBestTest() - Method in class si.ijs.kt.clus.algo.tdidt.DepthFirstInduce
 
getFindBestTest() - Method in class si.ijs.kt.clus.ext.bestfirst.BestFirstInduce
 
getFirst() - Method in class si.ijs.kt.clus.ext.semisupervised.utils.DoublesPair
 
getFirst() - Method in class si.ijs.kt.clus.util.jeans.util.list.MyListIter
 
getFirst() - Method in class si.ijs.kt.clus.util.tuple.Pair
 
getFirst() - Method in class si.ijs.kt.clus.util.tuple.Quadruple
 
getFirst() - Method in class si.ijs.kt.clus.util.tuple.Triple
 
getFirstError() - Method in class si.ijs.kt.clus.error.common.ClusErrorList
 
getFirstNonEmptyLine(LineNumberReader) - Static method in class si.ijs.kt.clus.model.io.ClusTreeReader
 
getFIs() - Method in class si.ijs.kt.clus.ext.optxval.OptXValBinTree
 
getFloat() - Method in class si.ijs.kt.clus.data.io.ClusReader
 
getFN() - Method in class si.ijs.kt.clus.error.hmlc.HierClassWiseAccuracy
 
getFold() - Method in class si.ijs.kt.clus.ext.optxval.OptXValGroup
 
getFold(int) - Method in class si.ijs.kt.clus.ext.optxval.OptXValGroup
 
getFold(int) - Method in class si.ijs.kt.clus.selection.XValDataSelection
 
getFold(int) - Method in class si.ijs.kt.clus.selection.XValMainSelection
 
getFold(int) - Method in class si.ijs.kt.clus.selection.XValRandomSelection
 
getFoldData(int) - Method in class si.ijs.kt.clus.data.rows.RowData
 
getFoldData2(int) - Method in class si.ijs.kt.clus.data.rows.RowData
Only used in efficient XVal code TODO Could be a bug: changeWeight -> multiplyWeight
getFolds() - Method in class si.ijs.kt.clus.ext.optxval.OptXValGroup
 
getFolds() - Method in class si.ijs.kt.clus.ext.optxval.OptXValSplit
 
getFormat() - Method in class si.ijs.kt.clus.error.common.ClusError
 
getFormat() - Method in class si.ijs.kt.clus.error.common.ClusErrorList
 
getFourth() - Method in class si.ijs.kt.clus.util.tuple.Quadruple
 
getFP() - Method in class si.ijs.kt.clus.error.hmlc.HierClassWiseAccuracy
 
getFrequency() - Method in class si.ijs.kt.clus.error.BinaryPredictionList
 
getFromOOBUsage(DataTuple) - Method in class si.ijs.kt.clus.ext.ensemble.ClusOOBErrorEstimate
 
getFTest() - Method in class si.ijs.kt.clus.main.settings.section.SettingsTree
 
getFTestArray() - Method in class si.ijs.kt.clus.main.settings.section.SettingsTree
 
getGeneral() - Method in class si.ijs.kt.clus.main.settings.Settings
 
getGeneric() - Method in class si.ijs.kt.clus.main.settings.Settings
 
getGenes() - Method in class si.ijs.kt.clus.util.tools.optimization.de.DEIndividual
 
getGIS() - Method in class si.ijs.kt.clus.main.settings.section.SettingsAttribute
 
getGISStat() - Method in class si.ijs.kt.clus.statistic.GISStat
Deprecated.
 
getGradient(int, ArrayList<Double>) - Method in class si.ijs.kt.clus.util.tools.optimization.gd.GDProblem
Compute gradient for the given weight dimension
getGroup() - Method in class si.ijs.kt.clus.util.jeans.util.MSStringTokenizer
 
getGroup(char) - Method in class si.ijs.kt.clus.util.jeans.util.MSStringTokenizer
 
getGTest(int, ClusStatManager) - Method in class si.ijs.kt.clus.statistic.ClassificationStat
Computes a G statistic and returns the result of a G test.
getGTestPValue(int, ClusStatManager) - Method in class si.ijs.kt.clus.statistic.ClassificationStat
Computes a G statistic and returns the p-value of a G test.
getHarmonicAvgRankCorr() - Method in class si.ijs.kt.clus.error.SpearmanRankCorrelationPerExample
Gives the average (=arithmetic mean) spearman rank correlation over all examples.
getHarmonicRankCorrVariance() - Method in class si.ijs.kt.clus.error.SpearmanRankCorrelationPerExample
Gives the variance of the harmonic mean of the rank correlation over all examples
getHeight(BinaryNode) - Static method in class si.ijs.kt.clus.util.jeans.tree.BinaryNode
 
getHeurCoveragePar() - Method in class si.ijs.kt.clus.main.settings.section.SettingsRules
 
getHeurDispOffset() - Method in class si.ijs.kt.clus.main.settings.section.SettingsRules
 
getHeuristic() - Method in class si.ijs.kt.clus.algo.split.CurrentBestTestAndHeuristic
 
getHeuristic() - Method in class si.ijs.kt.clus.ext.optiontree.TestAndHeuristic
 
getHeuristic() - Method in class si.ijs.kt.clus.main.ClusStatManager
 
getHeuristic() - Method in class si.ijs.kt.clus.main.settings.section.SettingsTree
 
getHeuristicComplexity() - Method in class si.ijs.kt.clus.main.settings.section.SettingsTree
 
getHeuristicName() - Method in class si.ijs.kt.clus.main.ClusStatManager
 
getHeuristicRatios() - Method in class si.ijs.kt.clus.ext.optiontree.ClusOptionNode
 
getHeuristicValue() - Method in class si.ijs.kt.clus.algo.split.CurrentBestTestAndHeuristic
 
getHeuristicValue() - Method in class si.ijs.kt.clus.ext.optiontree.TestAndHeuristic
 
getHeuristicValue() - Method in class si.ijs.kt.clus.model.test.NodeTest
 
getHeurPrototypeDistPar() - Method in class si.ijs.kt.clus.main.settings.section.SettingsRules
 
getHeurRuleDistPar() - Method in class si.ijs.kt.clus.main.settings.section.SettingsRules
 
getHier() - Method in class si.ijs.kt.clus.data.type.hierarchies.ClassesAttrType
 
getHier() - Method in class si.ijs.kt.clus.ext.hierarchical.ClassHierarchyPreproc
 
getHier() - Method in class si.ijs.kt.clus.main.ClusStatManager
 
getHier() - Method in class si.ijs.kt.clus.statistic.WHTDStatistic
 
getHierarchicalStat() - Method in class si.ijs.kt.clus.statistic.CombStatClassRegHier
 
getHierDistance() - Method in class si.ijs.kt.clus.main.settings.section.SettingsHMLC
 
getHierEvalClasses() - Method in class si.ijs.kt.clus.main.settings.section.SettingsHMLC
 
getHierOptimizeErrorMeasure() - Method in class si.ijs.kt.clus.main.settings.section.SettingsHMLC
 
getHierPruneInSig() - Method in class si.ijs.kt.clus.main.settings.section.SettingsHMLC
 
getHierSingleLabel() - Method in class si.ijs.kt.clus.main.settings.section.SettingsHMLC
 
getHierType() - Method in class si.ijs.kt.clus.main.settings.section.SettingsHMLC
 
getHierWParam() - Method in class si.ijs.kt.clus.main.settings.section.SettingsHMLC
 
getHierWType() - Method in class si.ijs.kt.clus.main.settings.section.SettingsHMLC
 
getHMLC() - Method in class si.ijs.kt.clus.main.settings.Settings
 
getHMTR() - Method in class si.ijs.kt.clus.main.settings.Settings
 
getHMTRAggregation() - Method in class si.ijs.kt.clus.main.settings.section.SettingsHMTR
 
getHMTRAggregationName() - Method in class si.ijs.kt.clus.main.settings.section.SettingsHMTR
 
getHMTRDistance() - Method in class si.ijs.kt.clus.main.settings.section.SettingsHMTR
 
getHMTRHierarchy() - Method in class si.ijs.kt.clus.data.ClusSchema
 
getHMTRHierarchyString() - Method in class si.ijs.kt.clus.main.settings.section.SettingsHMTR
 
getHMTRHierarchyWeight() - Method in class si.ijs.kt.clus.main.settings.section.SettingsHMTR
 
getHMTRType() - Method in class si.ijs.kt.clus.main.settings.section.SettingsHMTR
 
getHMTRValue(DataTuple, String) - Method in class si.ijs.kt.clus.data.type.primitive.NumericAttrType.MySerializable
 
getID() - Method in class si.ijs.kt.clus.addon.hmc.HMCAverageSingleClass.HMCAverageTreeModel
 
getID() - Method in class si.ijs.kt.clus.algo.kNN.KnnModel
 
getID() - Method in class si.ijs.kt.clus.algo.rules.ClusRule
 
getID() - Method in class si.ijs.kt.clus.algo.rules.ClusRuleSet
 
getID() - Method in class si.ijs.kt.clus.algo.tdidt.ClusNode
 
getID() - Method in class si.ijs.kt.clus.ext.ensemble.ClusForest
 
getID() - Method in class si.ijs.kt.clus.ext.featureRanking.relief.ReliefModel
 
getID() - Method in class si.ijs.kt.clus.ext.hierarchical.ClassTerm
 
getID() - Method in class si.ijs.kt.clus.ext.optiontree.ClusOptionNode
 
getID() - Method in class si.ijs.kt.clus.ext.optiontree.ClusSplitNode
 
getID() - Method in interface si.ijs.kt.clus.model.ClusModel
 
getID() - Method in class si.ijs.kt.clus.util.UniqueNodeIdentifier
 
getID(String) - Method in class si.ijs.kt.clus.ext.hierarchical.HierIO
 
getILevelC() - Method in class si.ijs.kt.clus.main.settings.Settings
 
getILevelCAlpha() - Method in class si.ijs.kt.clus.main.settings.section.SettingsILevelC
 
getILevelCFile() - Method in class si.ijs.kt.clus.main.settings.section.SettingsILevelC
 
getILevelCNbRandomConstraints() - Method in class si.ijs.kt.clus.main.settings.section.SettingsILevelC
 
getImmutableAnnotation() - Method in class si.ijs.kt.clus.util.cloner.Cloner
 
getIndex() - Method in class si.ijs.kt.clus.data.rows.DataTuple
 
getIndex() - Method in enum class si.ijs.kt.clus.data.type.ClusAttrType.AttributeUseType
 
getIndex() - Method in class si.ijs.kt.clus.data.type.ClusAttrType
 
getIndex() - Method in enum class si.ijs.kt.clus.data.type.ClusAttrType.ValueType
 
getIndex() - Method in class si.ijs.kt.clus.ext.hierarchical.ClassesValue
 
getIndex() - Method in class si.ijs.kt.clus.main.ClusRun
Index of clus run
getIndex() - Method in class si.ijs.kt.clus.util.jeans.tree.TreeIterator
 
getIndex() - Method in class si.ijs.kt.clus.util.jeans.util.compound.IndexedItem
 
getIndex() - Method in class si.ijs.kt.clus.util.jeans.util.sort.DoubleIndexSorter
 
getIndex(ClusAttrType) - Method in class si.ijs.kt.clus.addon.sit.TargetSet
 
getIndex(ClusRandomNonstatic) - Method in class si.ijs.kt.clus.selection.ClusSelection
 
getIndex(ClusRandomNonstatic) - Method in class si.ijs.kt.clus.selection.OverSample
 
getIndexInDataset() - Method in class si.ijs.kt.clus.ext.featureRanking.relief.nearestNeighbour.NearestNeighbour
 
getIndexString() - Method in class si.ijs.kt.clus.main.ClusRun
 
getIndice() - Method in class si.ijs.kt.clus.ext.semisupervised.utils.IndiceValuePair
 
getIndString() - Method in class si.ijs.kt.clus.util.tools.optimization.de.DEIndividual
 
getInduce() - Method in class si.ijs.kt.clus.algo.ClusInductionAlgorithmType
 
getInduce() - Method in class si.ijs.kt.clus.Clus
 
getInductionOrder() - Method in class si.ijs.kt.clus.main.settings.section.SettingsTree
 
getInductionTime() - Method in class si.ijs.kt.clus.ext.ensemble.container.OneBagResults
 
getInductionTime() - Method in class si.ijs.kt.clus.main.ClusModelInfoList
 
getInductionTimeSequential() - Method in class si.ijs.kt.clus.main.ClusModelInfoList
 
getInfo(int) - Method in class si.ijs.kt.clus.ext.ensemble.ros.ClusEnsembleROSInfo
 
getInitialRuleGeneratingMethod() - Method in class si.ijs.kt.clus.main.settings.section.SettingsRules
 
getInitialWeightVector() - Method in class si.ijs.kt.clus.util.tools.optimization.gd.GDProblem
Generates a zero vector.
getInnerTypes() - Method in class si.ijs.kt.clus.data.type.ClusAttrType
 
getInstance() - Static method in class si.ijs.kt.clus.addon.sit.Sit
Returns the one and only Sit instance (singleton pattern)
getInstance() - Static method in class si.ijs.kt.clus.ext.constraint.ClusConstraintFile
 
getInstance() - Static method in class si.ijs.kt.clus.statistic.StatisticPrintInfo
 
getInstance() - Static method in class si.ijs.kt.clus.util.cloner.ObjenesisInstantiationStrategy
 
getInstance() - Static method in class si.ijs.kt.clus.util.jeans.util.sort.DoubleIndexSorter
 
getInstance() - Static method in class si.ijs.kt.clus.util.jeans.util.sort.MStringSorter
 
getInstance(T) - Method in class si.ijs.kt.clus.util.cloner.FastClonerCustomCollection
 
getInstance(T) - Method in class si.ijs.kt.clus.util.cloner.FastClonerCustomMap
 
getInstCoveringWeightThreshold() - Method in class si.ijs.kt.clus.main.settings.section.SettingsRules
 
getInt() - Method in class si.ijs.kt.clus.util.jeans.io.ini.INIFileNominalOrIntOrVector
 
getInt(int) - Method in class si.ijs.kt.clus.util.jeans.io.ini.INIFileNominalOrIntOrVector
 
getIntAt(int) - Method in class si.ijs.kt.clus.util.jeans.io.ini.INIFileArray
 
getIntAt(int) - Method in class si.ijs.kt.clus.util.jeans.io.ini.INIFileNominal
 
getInternalAttributesNames(ClusNode) - Method in class si.ijs.kt.clus.ext.featureRanking.ClusFeatureRanking
Finds all attributes that appear as (part of) the test in a node in the given tree.
getInternalFoldIndices() - Method in class si.ijs.kt.clus.main.settings.section.SettingsSSL
 
getInternalNodesWithDepth(ClusNode) - Method in class si.ijs.kt.clus.ext.featureRanking.ensemble.ClusEnsembleFeatureRanking
Finds all internal nodes in the given tree.
getIntersectionCardinality(Set, Set, ClusDistance) - Static method in class si.ijs.kt.clus.ext.structuredTypes.SetOperations
 
getInterval(int) - Method in class si.ijs.kt.clus.util.jeans.util.IntervalCollection
 
getInts() - Method in class si.ijs.kt.clus.data.rows.DataTuple
 
getIntVal(int) - Method in class si.ijs.kt.clus.data.rows.DataTuple
 
getIntValue() - Method in class si.ijs.kt.clus.util.jeans.io.ini.INIFileStringOrInt
 
getIntVector() - Method in class si.ijs.kt.clus.util.jeans.io.ini.INIFileNominalOrIntOrVector
 
getIntVectorSorted() - Method in class si.ijs.kt.clus.util.jeans.io.ini.INIFileNominalOrIntOrVector
 
getIS_RULE_SIG_TESTING() - Method in class si.ijs.kt.clus.main.settings.section.SettingsRules
 
getIsBeamUpdated() - Method in class si.ijs.kt.clus.ext.beamsearch.ClusBeamModelDistance
 
getIsInArray() - Method in class si.ijs.kt.clus.model.test.SubsetTest
 
getIsInternalXValRun() - Method in class si.ijs.kt.clus.main.ClusRun
Other
getIsLeafVector() - Method in class si.ijs.kt.clus.ext.hierarchical.ClassHierarchy
Computes whether a given class term index corresponds to a leaf in the hierarchy or not.
getItemsHistory() - Method in class si.ijs.kt.clus.algo.kNN.methods.vpTree.VPItem
 
getIterations() - Method in class si.ijs.kt.clus.ext.ilevelc.COPKMeansModel
 
getIterations() - Method in class si.ijs.kt.clus.main.settings.section.SettingsSSL
 
getIterator() - Method in class si.ijs.kt.clus.data.rows.RowData
 
getIterator() - Method in class si.ijs.kt.clus.ext.beamsearch.ClusBeam
 
getIterator() - Method in class si.ijs.kt.clus.ext.exhaustivesearch.ClusExhaustive
 
getJukesCantorDistance(String[], String[]) - Method in class si.ijs.kt.clus.heuristic.GeneticDistanceHeuristic
 
getK() - Method in class si.ijs.kt.clus.algo.kNN.methods.kdTree.KDTree
Returns number of neighbors we search.
getK() - Method in class si.ijs.kt.clus.main.settings.section.SettingsSSL
 
getKey() - Method in class si.ijs.kt.clus.main.settings.section.SettingsAttribute
 
getKeyAttribute() - Method in class si.ijs.kt.clus.data.ClusSchema
 
getKeysVector() - Method in class si.ijs.kt.clus.ext.hierarchical.ClassTerm
 
getKimuraDistance(String[], String[]) - Method in class si.ijs.kt.clus.heuristic.GeneticDistanceHeuristic
 
getKNN() - Method in class si.ijs.kt.clus.main.settings.Settings
 
getKNNAttrWeight() - Method in class si.ijs.kt.clus.main.settings.section.SettingsKNN
 
getKNNDistanceWeights() - Method in class si.ijs.kt.clus.main.settings.section.SettingsKNN
 
getKNNDistanceWeightsString() - Method in class si.ijs.kt.clus.main.settings.section.SettingsKNN
 
getKNNk() - Method in class si.ijs.kt.clus.main.settings.section.SettingsKNN
 
getKNNTNormalized() - Method in class si.ijs.kt.clus.main.settings.section.SettingsKNNTree
 
getKNNTree() - Method in class si.ijs.kt.clus.main.settings.Settings
 
getLabelCardinality() - Method in class si.ijs.kt.clus.error.mlc.Coverage
 
getLambda(ClusNode) - Static method in class si.ijs.kt.clus.pruning.CartPruning
 
getLambdaMin(ClusNode) - Static method in class si.ijs.kt.clus.pruning.CartPruning
 
getLargestBranchIndex() - Method in class si.ijs.kt.clus.algo.tdidt.ClusNode
 
getLastNonDisabledType() - Method in class si.ijs.kt.clus.data.ClusSchema
 
getLatexЕmpty(String, String) - Static method in class si.ijs.kt.clus.util.tools.manual.ManualEntry
 
getLeafClusters(ClusNode, RowData, ArrayList<RowData>, ArrayList<Integer>) - Method in class si.ijs.kt.clus.pruning.EncodingCostPruning
 
getLearnerName() - Method in class si.ijs.kt.clus.main.settings.section.SettingsSIT
 
getLeft() - Method in class si.ijs.kt.clus.util.jeans.tree.BinaryNode
 
getLeftSubtree() - Method in class si.ijs.kt.clus.algo.kNN.methods.vpTree.VPNode
 
getLevel() - Method in class si.ijs.kt.clus.algo.kNN.methods.kdTree.KDNode
Returns level on which this node is situated.
getLevel() - Method in class si.ijs.kt.clus.ext.hierarchical.ClassTerm
 
getLevel() - Method in class si.ijs.kt.clus.ext.optiontree.ClusOptionNode
 
getLevel() - Method in class si.ijs.kt.clus.ext.optiontree.ClusSplitNode
 
getLevel() - Method in interface si.ijs.kt.clus.ext.optiontree.Node
 
getLevel() - Method in class si.ijs.kt.clus.util.jeans.math.MDouble
 
getLevel() - Method in class si.ijs.kt.clus.util.jeans.math.MNumber
 
getLevel() - Method in class si.ijs.kt.clus.util.jeans.tree.BinaryNode
 
getLevel() - Method in class si.ijs.kt.clus.util.jeans.tree.BottomLevelIterator
 
getLevel() - Method in class si.ijs.kt.clus.util.jeans.tree.LeafTreeIterator
 
getLevel() - Method in class si.ijs.kt.clus.util.jeans.tree.MyNode
 
getLevel() - Method in interface si.ijs.kt.clus.util.jeans.tree.Node
 
getLevel() - Method in class si.ijs.kt.clus.util.jeans.tree.SimpleNode
 
getLevel() - Method in class si.ijs.kt.clus.util.jeans.tree.TreeIterator
 
getLevel() - Method in class si.ijs.kt.clus.util.jeans.tree.VisitableNode
 
getLevelAndComputeArray(double, int) - Static method in class si.ijs.kt.clus.util.FTest
 
getLevelStat(int) - Method in class si.ijs.kt.clus.ext.beamsearch.ClusBeamSearch
 
getLevelStat(int) - Method in class si.ijs.kt.clus.ext.exhaustivesearch.ClusExhaustiveSearch
 
getLinDescrDim(int) - Method in class si.ijs.kt.clus.util.tools.optimization.OptimizationProblem
Returns descriptive dimension for linear term with this index.
getLine() - Method in class si.ijs.kt.clus.util.jeans.util.MStreamTokenizer
 
getLine() - Method in class si.ijs.kt.clus.util.jeans.util.MTokenizer
 
getLine(int) - Method in class si.ijs.kt.clus.model.test.FakeTest
 
getLine(int) - Method in class si.ijs.kt.clus.model.test.NodeTest
 
getLineAfterTree() - Method in class si.ijs.kt.clus.model.io.ClusTreeReader
 
getLineNumber() - Method in class si.ijs.kt.clus.model.io.ClusTreeReader
 
getLinTargetDim(int) - Method in class si.ijs.kt.clus.util.tools.optimization.OptimizationProblem
Returns target dimension for linear term with this index.
getLoadNeighboursFiles() - Method in class si.ijs.kt.clus.main.settings.section.SettingsKNN
 
getLoggingProperties() - Method in class si.ijs.kt.clus.main.settings.section.SettingsGeneral
 
getM5PruningMult() - Method in class si.ijs.kt.clus.main.settings.section.SettingsTree
 
getMacroAvgPrecision() - Method in class si.ijs.kt.clus.error.hmlc.HierClassWiseAccuracy
 
getMacroPrecision(int) - Method in class si.ijs.kt.clus.error.mlc.MacroPrecision
 
getMacroRecall(int) - Method in class si.ijs.kt.clus.error.mlc.MacroRecall
 
getMainArg(int) - Method in class si.ijs.kt.clus.util.jeans.util.cmdline.CMDLineArgs
 
getMainTarget() - Method in class si.ijs.kt.clus.main.settings.section.SettingsSIT
 
getMajorityClass(int) - Method in class si.ijs.kt.clus.statistic.ClassificationStat
Returns the majority class for a given attribute.
getMajorityClass(int) - Method in class si.ijs.kt.clus.statistic.KnnMlcStat
Computes the class value with the highest probability, for each label.
getMajorityClassDiff(int, ClassificationStat) - Method in class si.ijs.kt.clus.statistic.ClassificationStat
 
getMax() - Method in class si.ijs.kt.clus.util.jeans.math.SingleStat
 
getMaxDepth() - Method in class si.ijs.kt.clus.ext.hierarchical.ClassHierarchy
 
getMaxDepth() - Method in class si.ijs.kt.clus.ext.hierarchical.ClassTerm
 
getMaxErrorConstraint(int) - Method in class si.ijs.kt.clus.main.settings.section.SettingsConstraints
 
getMaxErrorConstraintNumber() - Method in class si.ijs.kt.clus.main.settings.section.SettingsConstraints
 
getMaxErrorConstraintVector() - Method in class si.ijs.kt.clus.main.settings.section.SettingsConstraints
 
getMaxGradients(int) - Method in class si.ijs.kt.clus.util.tools.optimization.gd.GDProblem
Return the gradients with maximum absolute value.
getMaxIndex() - Method in class si.ijs.kt.clus.util.jeans.util.IntervalCollection
 
getMaxIndex(ArrayList) - Static method in class si.ijs.kt.clus.util.jeans.util.IntervalCollection
 
getMaxK() - Method in class si.ijs.kt.clus.algo.kNN.KnnModel
 
getMaxK(int[]) - Static method in class si.ijs.kt.clus.algo.kNN.KnnClassifier
 
getMaxLeafDepth() - Method in class si.ijs.kt.clus.ext.optiontree.ClusOptionNode
 
getMaxLeafDepth() - Method in class si.ijs.kt.clus.ext.optiontree.ClusSplitNode
 
getMaxLeafDepth() - Method in interface si.ijs.kt.clus.ext.optiontree.Node
 
getMaxLeafDepth() - Method in class si.ijs.kt.clus.util.jeans.tree.MyNode
 
getMaxNbBags() - Static method in class si.ijs.kt.clus.ext.ensemble.ClusEnsembleInduce
Maximum number of bags for memory optimization
getMaxNbIterations() - Method in class si.ijs.kt.clus.ext.featureRanking.relief.ClusReliefFeatureRanking
 
getMaxNbStats() - Method in class si.ijs.kt.clus.data.ClusSchema
 
getMaxNbStats() - Method in class si.ijs.kt.clus.data.type.ClusAttrType
 
getMaxNbStats() - Method in class si.ijs.kt.clus.data.type.primitive.NominalAttrType
 
getMaxNbStats() - Method in class si.ijs.kt.clus.data.type.primitive.NumericAttrType
 
getMaxPoissonIterations() - Method in class si.ijs.kt.clus.main.settings.section.SettingsRules
Number of iterations in org.apache.commons.math4.distribution.PoissonDistribution
getMaxRuleCardinality() - Method in class si.ijs.kt.clus.main.settings.section.SettingsRules
Expected cardinality (excluding default rule)
getMaxRulesNb() - Method in class si.ijs.kt.clus.main.settings.section.SettingsRules
 
getMaxSize() - Method in class si.ijs.kt.clus.main.settings.section.SettingsConstraints
 
getMaxSize() - Method in class si.ijs.kt.clus.pruning.SizeConstraintPruning
 
getMaxTuples() - Method in class si.ijs.kt.clus.algo.kNN.methods.kdTree.KDTree
 
getMaxValue() - Method in class si.ijs.kt.clus.data.type.primitive.IndexAttrType
 
getMaxWidth() - Method in class si.ijs.kt.clus.ext.beamsearch.ClusBeam
 
getMaxWidth() - Method in class si.ijs.kt.clus.ext.exhaustivesearch.ClusExhaustive
 
getMean() - Method in class si.ijs.kt.clus.util.jeans.math.SingleStat
 
getMean(double[]) - Static method in class si.ijs.kt.clus.ext.semisupervised.Helper
 
getMean(int) - Method in class si.ijs.kt.clus.ext.beamsearch.ClusBeamSimRegrStat
 
getMean(int) - Method in class si.ijs.kt.clus.statistic.RegressionStat
 
getMean(int) - Method in class si.ijs.kt.clus.statistic.RegressionStatBase
 
getMean(int) - Method in class si.ijs.kt.clus.statistic.RegressionStatBinaryNomiss
 
getMean(int) - Method in class si.ijs.kt.clus.statistic.WHTDStatistic
 
getMean(int) - Method in class si.ijs.kt.clus.util.tools.optimization.OptimizationProblem
 
getMeanBranch(boolean[]) - Method in class si.ijs.kt.clus.ext.hierarchical.ClassHierarchy
 
getMeanBranch(boolean[], SingleStat) - Method in class si.ijs.kt.clus.ext.hierarchical.ClassTerm
 
getMedian() - Method in class si.ijs.kt.clus.algo.kNN.methods.vpTree.VPNode
 
getMedianThreshold() - Method in class si.ijs.kt.clus.ext.ensemble.ClusBoostingForest
 
getMemory() - Static method in class si.ijs.kt.clus.util.ResourceInfo
 
getMemorySize() - Static method in class si.ijs.kt.clus.util.ResourceInfo
 
getMEstimate() - Method in class si.ijs.kt.clus.main.settings.section.SettingsNominal
 
getMicroFOne(int) - Method in class si.ijs.kt.clus.error.mlc.MicroFOne
 
getMicroPrecision(int) - Method in class si.ijs.kt.clus.error.mlc.MicroPrecision
 
getMicroRecall(int) - Method in class si.ijs.kt.clus.error.mlc.MicroRecall
 
getMin() - Method in class si.ijs.kt.clus.util.jeans.math.SingleStat
 
getMinDepth() - Method in class si.ijs.kt.clus.ext.hierarchical.ClassTerm
 
getMinimalKnownWeight() - Method in class si.ijs.kt.clus.main.settings.section.SettingsModel
 
getMinimalNbExamples() - Method in class si.ijs.kt.clus.main.settings.section.SettingsModel
 
getMinimalWeight() - Method in class si.ijs.kt.clus.main.settings.section.SettingsModel
 
getMinIndex() - Method in class si.ijs.kt.clus.util.jeans.util.IntervalCollection
 
getMinIndex(ArrayList) - Static method in class si.ijs.kt.clus.util.jeans.util.IntervalCollection
 
getMinPWDistanceBetween(int[], int[]) - Method in class si.ijs.kt.clus.heuristic.GeneticDistanceHeuristicMatrix
 
getMinValue() - Method in class si.ijs.kt.clus.ext.beamsearch.ClusBeam
 
getMisclassificationError(ArrayList<RowData[]>, int) - Static method in class si.ijs.kt.clus.addon.sit.Evaluator
 
getMisclassificationError(RowData[], int) - Static method in class si.ijs.kt.clus.addon.sit.Evaluator
 
getMissingClusteringAttrHandling() - Method in class si.ijs.kt.clus.main.settings.section.SettingsTree
 
getMissingTargetAttrHandling() - Method in class si.ijs.kt.clus.main.settings.section.SettingsTree
 
getMissingTargetHandling() - Method in class si.ijs.kt.clus.main.settings.section.SettingsRelief
 
getMissingTargets() - Method in class si.ijs.kt.clus.data.rows.DataTuple
Returns the indices of the targets with missing values.
getMissingTargets() - Method in class si.ijs.kt.clus.data.rows.RowData
 
getMissStat() - Method in class si.ijs.kt.clus.algo.split.CurrentBestTestAndHeuristic
 
getMissStat() - Method in class si.ijs.kt.clus.ext.optiontree.TestAndHeuristic
 
getMLC() - Method in class si.ijs.kt.clus.main.settings.Settings
 
getMlcCountSmoother() - Method in class si.ijs.kt.clus.main.settings.section.SettingsKNN
 
getModel() - Method in class si.ijs.kt.clus.ext.beamsearch.ClusBeamModel
 
getModel() - Method in class si.ijs.kt.clus.ext.ensemble.container.OneBagResults
 
getModel() - Method in class si.ijs.kt.clus.main.settings.Settings
 
getModel() - Method in class si.ijs.kt.clus.model.ClusModelInfo
 
getModel(int) - Method in class si.ijs.kt.clus.ext.ensemble.ClusForest
 
getModel(int) - Method in class si.ijs.kt.clus.main.ClusModelInfoList
 
getModel(int) - Method in class si.ijs.kt.clus.model.io.ClusModelCollectionIO
 
getModel(String) - Method in class si.ijs.kt.clus.model.io.ClusModelCollectionIO
 
getModelComponent() - Method in class si.ijs.kt.clus.error.ContingencyTable
 
getModelError() - Method in class si.ijs.kt.clus.error.AbsoluteError
 
getModelError() - Method in class si.ijs.kt.clus.error.Accuracy
 
getModelError() - Method in class si.ijs.kt.clus.error.AvgDistancesError
 
getModelError() - Method in class si.ijs.kt.clus.error.ClusSumError
 
getModelError() - Method in class si.ijs.kt.clus.error.common.ClusError
 
getModelError() - Method in class si.ijs.kt.clus.error.common.multiscore.MultiScoreWrapper
 
getModelError() - Method in class si.ijs.kt.clus.error.hmlc.HierErrorMeasures
 
getModelError() - Method in class si.ijs.kt.clus.error.hmlc.HierLevelAccuracy
 
getModelError() - Method in class si.ijs.kt.clus.error.hmlc.HierRMSError
 
getModelError() - Method in class si.ijs.kt.clus.error.mlc.AveragePrecision
 
getModelError() - Method in class si.ijs.kt.clus.error.mlc.Coverage
 
getModelError() - Method in class si.ijs.kt.clus.error.mlc.HammingLoss
 
getModelError() - Method in class si.ijs.kt.clus.error.mlc.MacroFOne
 
getModelError() - Method in class si.ijs.kt.clus.error.mlc.MacroPrecision
 
getModelError() - Method in class si.ijs.kt.clus.error.mlc.MacroRecall
 
getModelError() - Method in class si.ijs.kt.clus.error.mlc.MicroFOne
 
getModelError() - Method in class si.ijs.kt.clus.error.mlc.MicroPrecision
 
getModelError() - Method in class si.ijs.kt.clus.error.mlc.MicroRecall
 
getModelError() - Method in class si.ijs.kt.clus.error.mlc.MLAccuracy
 
getModelError() - Method in class si.ijs.kt.clus.error.mlc.MLaverageAUPRC
 
getModelError() - Method in class si.ijs.kt.clus.error.mlc.MLaverageAUROC
 
getModelError() - Method in class si.ijs.kt.clus.error.mlc.MLFOneMeasure
 
getModelError() - Method in class si.ijs.kt.clus.error.mlc.MLpooledAUPRC
 
getModelError() - Method in class si.ijs.kt.clus.error.mlc.MLPrecision
 
getModelError() - Method in class si.ijs.kt.clus.error.mlc.MLRecall
 
getModelError() - Method in class si.ijs.kt.clus.error.mlc.MLROCAndPRCurve
 
getModelError() - Method in class si.ijs.kt.clus.error.mlc.MLweightedAUPRC
 
getModelError() - Method in class si.ijs.kt.clus.error.mlc.OneError
 
getModelError() - Method in class si.ijs.kt.clus.error.mlc.RankingLoss
 
getModelError() - Method in class si.ijs.kt.clus.error.mlc.SubsetAccuracy
 
getModelError() - Method in class si.ijs.kt.clus.error.mlcForHmlc.MlcMeasuresForHmlc
 
getModelError() - Method in class si.ijs.kt.clus.error.MSError
 
getModelError() - Method in class si.ijs.kt.clus.error.MSNominalError
 
getModelError() - Method in class si.ijs.kt.clus.error.PearsonCorrelation
 
getModelError() - Method in class si.ijs.kt.clus.error.RMSError
 
getModelError() - Method in class si.ijs.kt.clus.error.RRMSError
 
getModelError() - Method in class si.ijs.kt.clus.error.sets.Accuracy
 
getModelError() - Method in class si.ijs.kt.clus.error.sets.F1Score
 
getModelError() - Method in class si.ijs.kt.clus.error.sets.HammingLossError
 
getModelError() - Method in class si.ijs.kt.clus.error.sets.Precision
 
getModelError() - Method in class si.ijs.kt.clus.error.sets.Recall
 
getModelError() - Method in class si.ijs.kt.clus.error.sets.SubsetAccuracy
 
getModelError() - Method in class si.ijs.kt.clus.error.WAHNDError
 
getModelError(int) - Method in class si.ijs.kt.clus.error.mlc.MLROCAndPRCurve
 
getModelError(int) - Method in class si.ijs.kt.clus.error.mlcForHmlc.AveragePrecision
 
getModelError(int) - Method in class si.ijs.kt.clus.error.mlcForHmlc.Coverage
 
getModelError(int) - Method in class si.ijs.kt.clus.error.mlcForHmlc.HammingLoss
 
getModelError(int) - Method in class si.ijs.kt.clus.error.mlcForHmlc.MacroFOne
 
getModelError(int) - Method in class si.ijs.kt.clus.error.mlcForHmlc.MacroPrecision
 
getModelError(int) - Method in class si.ijs.kt.clus.error.mlcForHmlc.MacroRecall
 
getModelError(int) - Method in class si.ijs.kt.clus.error.mlcForHmlc.MicroFOne
 
getModelError(int) - Method in class si.ijs.kt.clus.error.mlcForHmlc.MicroPrecision
 
getModelError(int) - Method in class si.ijs.kt.clus.error.mlcForHmlc.MicroRecall
 
getModelError(int) - Method in class si.ijs.kt.clus.error.mlcForHmlc.MLAccuracy
 
getModelError(int) - Method in class si.ijs.kt.clus.error.mlcForHmlc.MLaverageAUPRC
 
getModelError(int) - Method in class si.ijs.kt.clus.error.mlcForHmlc.MLaverageAUROC
 
getModelError(int) - Method in interface si.ijs.kt.clus.error.mlcForHmlc.MlcHmlcSubError
 
getModelError(int) - Method in class si.ijs.kt.clus.error.mlcForHmlc.MLFOneMeasure
 
getModelError(int) - Method in class si.ijs.kt.clus.error.mlcForHmlc.MLpooledAUPRC
 
getModelError(int) - Method in class si.ijs.kt.clus.error.mlcForHmlc.MLPrecision
 
getModelError(int) - Method in class si.ijs.kt.clus.error.mlcForHmlc.MLRecall
 
getModelError(int) - Method in class si.ijs.kt.clus.error.mlcForHmlc.MLweightedAUPRC
 
getModelError(int) - Method in class si.ijs.kt.clus.error.mlcForHmlc.OneError
 
getModelError(int) - Method in class si.ijs.kt.clus.error.mlcForHmlc.RankingLoss
 
getModelError(int) - Method in class si.ijs.kt.clus.error.mlcForHmlc.SubsetAccuracy
 
getModelErrorAdditive() - Method in class si.ijs.kt.clus.error.AvgDistancesError
 
getModelErrorAdditive() - Method in class si.ijs.kt.clus.error.common.ClusError
 
getModelErrorComponent(int) - Method in class si.ijs.kt.clus.error.Accuracy
 
getModelErrorComponent(int) - Method in class si.ijs.kt.clus.error.AvgDistancesError
 
getModelErrorComponent(int) - Method in class si.ijs.kt.clus.error.common.ClusError
 
getModelErrorComponent(int) - Method in interface si.ijs.kt.clus.error.common.ComponentError
 
getModelErrorComponent(int) - Method in class si.ijs.kt.clus.error.ContingencyTable
 
getModelErrorComponent(int) - Method in class si.ijs.kt.clus.error.hmlc.HierRMSError
 
getModelErrorComponent(int) - Method in class si.ijs.kt.clus.error.MisclassificationError
 
getModelErrorComponent(int) - Method in class si.ijs.kt.clus.error.mlc.MacroFOne
 
getModelErrorComponent(int) - Method in class si.ijs.kt.clus.error.mlc.MacroPrecision
 
getModelErrorComponent(int) - Method in class si.ijs.kt.clus.error.mlc.MacroRecall
 
getModelErrorComponent(int) - Method in class si.ijs.kt.clus.error.mlcForHmlc.MacroFOne
 
getModelErrorComponent(int) - Method in class si.ijs.kt.clus.error.mlcForHmlc.MacroPrecision
 
getModelErrorComponent(int) - Method in class si.ijs.kt.clus.error.mlcForHmlc.MacroRecall
 
getModelErrorComponent(int) - Method in class si.ijs.kt.clus.error.MSError
 
getModelErrorComponent(int) - Method in class si.ijs.kt.clus.error.MSNominalError
 
getModelErrorComponent(int) - Method in class si.ijs.kt.clus.error.PearsonCorrelation
 
getModelErrorComponent(int) - Method in class si.ijs.kt.clus.error.RelativeError
 
getModelErrorComponent(int) - Method in class si.ijs.kt.clus.error.RMSError
 
getModelErrorComponent(int) - Method in class si.ijs.kt.clus.error.RRMSError
 
getModelErrorComponent(int) - Method in class si.ijs.kt.clus.error.sets.Accuracy
 
getModelErrorComponent(int) - Method in class si.ijs.kt.clus.error.sets.F1Score
 
getModelErrorComponent(int) - Method in class si.ijs.kt.clus.error.sets.HammingLossError
 
getModelErrorComponent(int) - Method in class si.ijs.kt.clus.error.sets.Precision
 
getModelErrorComponent(int) - Method in class si.ijs.kt.clus.error.sets.Recall
 
getModelErrorComponent(int) - Method in class si.ijs.kt.clus.error.sets.SubsetAccuracy
 
getModelErrorComponent(int) - Method in class si.ijs.kt.clus.error.SpearmanRankCorrelation
 
getModelErrorComponent(int) - Method in class si.ijs.kt.clus.error.SpearmanRankCorrelationPerExample
 
getModelErrorComponent(int) - Method in class si.ijs.kt.clus.ext.ilevelc.ILevelCRandIndex
 
getModelErrorStandardError() - Method in class si.ijs.kt.clus.error.common.ClusError
 
getModelErrorStandardError() - Method in class si.ijs.kt.clus.error.MSError
 
getModelErrorStandardError() - Method in class si.ijs.kt.clus.error.MSNominalError
 
getModelErrorStandardError() - Method in class si.ijs.kt.clus.error.sets.Accuracy
 
getModelErrorStandardError() - Method in class si.ijs.kt.clus.error.sets.F1Score
 
getModelErrorStandardError() - Method in class si.ijs.kt.clus.error.sets.HammingLossError
 
getModelErrorStandardError() - Method in class si.ijs.kt.clus.error.sets.Precision
 
getModelErrorStandardError() - Method in class si.ijs.kt.clus.error.sets.Recall
 
getModelErrorStandardError() - Method in class si.ijs.kt.clus.error.sets.SubsetAccuracy
 
getModelIndex() - Method in class si.ijs.kt.clus.ext.ensemble.container.OneBagResults
 
getModelInfo() - Method in class si.ijs.kt.clus.addon.hmc.HMCAverageSingleClass.HMCAverageTreeModel
 
getModelInfo() - Method in class si.ijs.kt.clus.algo.kNN.KnnModel
 
getModelInfo() - Method in class si.ijs.kt.clus.algo.rules.ClusRule
 
getModelInfo() - Method in class si.ijs.kt.clus.algo.rules.ClusRuleSet
 
getModelInfo() - Method in class si.ijs.kt.clus.algo.tdidt.ClusNode
 
getModelInfo() - Method in class si.ijs.kt.clus.ext.ensemble.ClusForest
 
getModelInfo() - Method in class si.ijs.kt.clus.ext.featureRanking.relief.ReliefModel
 
getModelInfo() - Method in class si.ijs.kt.clus.ext.ilevelc.COPKMeansModel
 
getModelInfo() - Method in class si.ijs.kt.clus.ext.optiontree.ClusOptionNode
 
getModelInfo() - Method in class si.ijs.kt.clus.ext.optiontree.ClusSplitNode
 
getModelInfo() - Method in class si.ijs.kt.clus.ext.optiontree.MyNode
 
getModelInfo() - Method in interface si.ijs.kt.clus.model.ClusModel
 
getModelInfo() - Method in class si.ijs.kt.clus.model.ClusModelInfo
 
getModelInfo(int) - Method in class si.ijs.kt.clus.main.ClusModelInfoList
 
getModelInfo(int) - Method in class si.ijs.kt.clus.model.io.ClusModelCollectionIO
 
getModelInfoFallback(int, int) - Method in class si.ijs.kt.clus.main.ClusModelInfoList
 
getModelJSON() - Method in class si.ijs.kt.clus.addon.hmc.HMCAverageSingleClass.HMCAverageTreeModel
 
getModelJSON() - Method in class si.ijs.kt.clus.algo.kNN.KnnModel
 
getModelJSON() - Method in class si.ijs.kt.clus.algo.rules.ClusRule
 
getModelJSON() - Method in class si.ijs.kt.clus.algo.rules.ClusRuleSet
 
getModelJSON() - Method in class si.ijs.kt.clus.algo.tdidt.ClusNode
 
getModelJSON() - Method in class si.ijs.kt.clus.ext.ensemble.ClusForest
 
getModelJSON() - Method in class si.ijs.kt.clus.ext.featureRanking.relief.ReliefModel
 
getModelJSON() - Method in class si.ijs.kt.clus.ext.optiontree.ClusOptionNode
 
getModelJSON() - Method in class si.ijs.kt.clus.ext.optiontree.ClusSplitNode
 
getModelJSON() - Method in interface si.ijs.kt.clus.model.ClusModel
 
getModelJSON(StatisticPrintInfo) - Method in class si.ijs.kt.clus.addon.hmc.HMCAverageSingleClass.HMCAverageTreeModel
 
getModelJSON(StatisticPrintInfo) - Method in class si.ijs.kt.clus.algo.kNN.KnnModel
 
getModelJSON(StatisticPrintInfo) - Method in class si.ijs.kt.clus.algo.rules.ClusRule
 
getModelJSON(StatisticPrintInfo) - Method in class si.ijs.kt.clus.algo.rules.ClusRuleSet
 
getModelJSON(StatisticPrintInfo) - Method in class si.ijs.kt.clus.algo.tdidt.ClusNode
 
getModelJSON(StatisticPrintInfo) - Method in class si.ijs.kt.clus.ext.ensemble.ClusForest
 
getModelJSON(StatisticPrintInfo) - Method in class si.ijs.kt.clus.ext.featureRanking.relief.ReliefModel
 
getModelJSON(StatisticPrintInfo) - Method in class si.ijs.kt.clus.ext.optiontree.ClusOptionNode
 
getModelJSON(StatisticPrintInfo) - Method in class si.ijs.kt.clus.ext.optiontree.ClusSplitNode
 
getModelJSON(StatisticPrintInfo) - Method in interface si.ijs.kt.clus.model.ClusModel
 
getModelJSON(StatisticPrintInfo, RowData) - Method in class si.ijs.kt.clus.addon.hmc.HMCAverageSingleClass.HMCAverageTreeModel
 
getModelJSON(StatisticPrintInfo, RowData) - Method in class si.ijs.kt.clus.algo.kNN.KnnModel
 
getModelJSON(StatisticPrintInfo, RowData) - Method in class si.ijs.kt.clus.algo.rules.ClusRule
 
getModelJSON(StatisticPrintInfo, RowData) - Method in class si.ijs.kt.clus.algo.rules.ClusRuleSet
 
getModelJSON(StatisticPrintInfo, RowData) - Method in class si.ijs.kt.clus.algo.tdidt.ClusNode
 
getModelJSON(StatisticPrintInfo, RowData) - Method in class si.ijs.kt.clus.ext.ensemble.ClusForest
 
getModelJSON(StatisticPrintInfo, RowData) - Method in class si.ijs.kt.clus.ext.featureRanking.relief.ReliefModel
 
getModelJSON(StatisticPrintInfo, RowData) - Method in class si.ijs.kt.clus.ext.optiontree.ClusOptionNode
 
getModelJSON(StatisticPrintInfo, RowData) - Method in class si.ijs.kt.clus.ext.optiontree.ClusSplitNode
 
getModelJSON(StatisticPrintInfo, RowData) - Method in interface si.ijs.kt.clus.model.ClusModel
 
getModelName(int) - Method in class si.ijs.kt.clus.main.ClusModelInfoList
 
getModelPredictions() - Method in class si.ijs.kt.clus.ext.beamsearch.ClusBeamModel
 
getModelProcessor(int) - Method in class si.ijs.kt.clus.model.processor.ModelProcessorCollection
 
getModelProcessors(int) - Method in class si.ijs.kt.clus.model.ClusModelInfo
 
getModels() - Method in class si.ijs.kt.clus.ext.ensemble.ClusForest
Return the list of decision trees = the ensemble.
getModelSize() - Method in class si.ijs.kt.clus.addon.hmc.HMCAverageSingleClass.HMCAverageTreeModel
 
getModelSize() - Method in class si.ijs.kt.clus.algo.kNN.KnnModel
 
getModelSize() - Method in class si.ijs.kt.clus.algo.rules.ClusRule
 
getModelSize() - Method in class si.ijs.kt.clus.algo.rules.ClusRuleSet
How many rules in the set?
getModelSize() - Method in class si.ijs.kt.clus.algo.tdidt.ClusNode
 
getModelSize() - Method in class si.ijs.kt.clus.ext.ensemble.ClusForest
 
getModelSize() - Method in class si.ijs.kt.clus.ext.featureRanking.relief.ReliefModel
 
getModelSize() - Method in class si.ijs.kt.clus.ext.ilevelc.COPKMeansModel
 
getModelSize() - Method in class si.ijs.kt.clus.ext.optiontree.ClusOptionNode
 
getModelSize() - Method in class si.ijs.kt.clus.ext.optiontree.ClusSplitNode
 
getModelSize() - Method in interface si.ijs.kt.clus.model.ClusModel
 
getModelSize() - Method in class si.ijs.kt.clus.model.ClusModelInfo
 
getModelSubspace(int) - Method in class si.ijs.kt.clus.ext.ensemble.ros.ClusEnsembleROSInfo
 
getModelSubspaceBoolean(int) - Method in class si.ijs.kt.clus.ext.ensemble.ros.ClusEnsembleROSInfo
 
getModelTests() - Method in class si.ijs.kt.clus.algo.rules.ClusRule
 
getModelWeight(int) - Method in class si.ijs.kt.clus.ext.ensemble.ClusOOBWeights
 
getMostSpecificClass() - Method in class si.ijs.kt.clus.ext.hierarchical.ClassesValue
 
getMSE(ArrayList<RowData[]>, int) - Static method in class si.ijs.kt.clus.addon.sit.Evaluator
 
getMSE(RowData[]) - Static method in class si.ijs.kt.clus.addon.sit.Evaluator
 
getMSE(RowData[], int) - Static method in class si.ijs.kt.clus.addon.sit.Evaluator
 
getMultilabelDistance() - Method in class si.ijs.kt.clus.ext.featureRanking.relief.ClusReliefFeatureRanking
 
getMultilabelDistance() - Method in class si.ijs.kt.clus.main.settings.section.SettingsRelief
 
getMultiLabelRankingMeasures() - Method in class si.ijs.kt.clus.main.settings.section.SettingsMLC
 
getMultiLabelThreshold() - Method in class si.ijs.kt.clus.main.settings.section.SettingsMLC
 
getMultiLabelThresholdOptimization() - Method in class si.ijs.kt.clus.main.settings.section.SettingsMLC
 
getMultiScore() - Method in class si.ijs.kt.clus.Clus
 
getName() - Method in class si.ijs.kt.clus.addon.sit.mtLearner.AvgLearner
 
getName() - Method in class si.ijs.kt.clus.addon.sit.mtLearner.ClusLearner
 
getName() - Method in class si.ijs.kt.clus.addon.sit.mtLearner.KNNLearner
 
getName() - Method in interface si.ijs.kt.clus.addon.sit.mtLearner.MTLearner
 
getName() - Method in class si.ijs.kt.clus.addon.sit.searchAlgorithm.AllTargets
 
getName() - Method in class si.ijs.kt.clus.addon.sit.searchAlgorithm.GeneticSearch
 
getName() - Method in class si.ijs.kt.clus.addon.sit.searchAlgorithm.GreedySIT
 
getName() - Method in class si.ijs.kt.clus.addon.sit.searchAlgorithm.NoStopSearch
 
getName() - Method in class si.ijs.kt.clus.addon.sit.searchAlgorithm.OneTarget
 
getName() - Method in interface si.ijs.kt.clus.addon.sit.searchAlgorithm.SearchAlgorithm
 
getName() - Method in class si.ijs.kt.clus.addon.sit.searchAlgorithm.TC
 
getName() - Method in class si.ijs.kt.clus.data.attweights.ClusAttributeWeights
 
getName() - Method in class si.ijs.kt.clus.data.cols.attribute.ClusAttribute
 
getName() - Method in class si.ijs.kt.clus.data.io.ClusReader
 
getName() - Method in enum class si.ijs.kt.clus.data.type.ClusAttrType.AttributeType
 
getName() - Method in class si.ijs.kt.clus.data.type.ClusAttrType
 
getName() - Method in class si.ijs.kt.clus.error.AbsoluteError
 
getName() - Method in class si.ijs.kt.clus.error.Accuracy
 
getName() - Method in class si.ijs.kt.clus.error.AvgDistancesError
 
getName() - Method in class si.ijs.kt.clus.error.ClusSumError
 
getName() - Method in class si.ijs.kt.clus.error.common.ClusError
Information
getName() - Method in class si.ijs.kt.clus.error.common.multiscore.MultiScoreWrapper
 
getName() - Method in class si.ijs.kt.clus.error.ContingencyTable
 
getName() - Method in class si.ijs.kt.clus.error.hmlc.HierClassWiseAccuracy
 
getName() - Method in class si.ijs.kt.clus.error.hmlc.HierErrorMeasures
 
getName() - Method in class si.ijs.kt.clus.error.hmlc.HierLevelAccuracy
 
getName() - Method in class si.ijs.kt.clus.error.hmlc.HierRMSError
 
getName() - Method in class si.ijs.kt.clus.error.ICVPairwiseDistancesError
 
getName() - Method in class si.ijs.kt.clus.error.MisclassificationError
 
getName() - Method in class si.ijs.kt.clus.error.mlc.AveragePrecision
 
getName() - Method in class si.ijs.kt.clus.error.mlc.Coverage
 
getName() - Method in class si.ijs.kt.clus.error.mlc.HammingLoss
 
getName() - Method in class si.ijs.kt.clus.error.mlc.MacroFOne
 
getName() - Method in class si.ijs.kt.clus.error.mlc.MacroPrecision
 
getName() - Method in class si.ijs.kt.clus.error.mlc.MacroRecall
 
getName() - Method in class si.ijs.kt.clus.error.mlc.MicroFOne
 
getName() - Method in class si.ijs.kt.clus.error.mlc.MicroPrecision
 
getName() - Method in class si.ijs.kt.clus.error.mlc.MicroRecall
 
getName() - Method in class si.ijs.kt.clus.error.mlc.MLAccuracy
 
getName() - Method in class si.ijs.kt.clus.error.mlc.MLaverageAUPRC
 
getName() - Method in class si.ijs.kt.clus.error.mlc.MLaverageAUROC
 
getName() - Method in class si.ijs.kt.clus.error.mlc.MLFOneMeasure
 
getName() - Method in class si.ijs.kt.clus.error.mlc.MLpooledAUPRC
 
getName() - Method in class si.ijs.kt.clus.error.mlc.MLPrecision
 
getName() - Method in class si.ijs.kt.clus.error.mlc.MLRecall
 
getName() - Method in class si.ijs.kt.clus.error.mlc.MLROCAndPRCurve
 
getName() - Method in class si.ijs.kt.clus.error.mlc.MLweightedAUPRC
 
getName() - Method in class si.ijs.kt.clus.error.mlc.OneError
 
getName() - Method in class si.ijs.kt.clus.error.mlc.RankingLoss
 
getName() - Method in class si.ijs.kt.clus.error.mlc.SubsetAccuracy
 
getName() - Method in class si.ijs.kt.clus.error.mlcForHmlc.AveragePrecision
 
getName() - Method in class si.ijs.kt.clus.error.mlcForHmlc.Coverage
 
getName() - Method in class si.ijs.kt.clus.error.mlcForHmlc.HammingLoss
 
getName() - Method in class si.ijs.kt.clus.error.mlcForHmlc.MacroFOne
 
getName() - Method in class si.ijs.kt.clus.error.mlcForHmlc.MacroPrecision
 
getName() - Method in class si.ijs.kt.clus.error.mlcForHmlc.MacroRecall
 
getName() - Method in class si.ijs.kt.clus.error.mlcForHmlc.MicroFOne
 
getName() - Method in class si.ijs.kt.clus.error.mlcForHmlc.MicroPrecision
 
getName() - Method in class si.ijs.kt.clus.error.mlcForHmlc.MicroRecall
 
getName() - Method in class si.ijs.kt.clus.error.mlcForHmlc.MLAccuracy
 
getName() - Method in class si.ijs.kt.clus.error.mlcForHmlc.MLaverageAUPRC
 
getName() - Method in class si.ijs.kt.clus.error.mlcForHmlc.MLaverageAUROC
 
getName() - Method in interface si.ijs.kt.clus.error.mlcForHmlc.MlcHmlcSubError
 
getName() - Method in class si.ijs.kt.clus.error.mlcForHmlc.MlcMeasuresForHmlc
 
getName() - Method in class si.ijs.kt.clus.error.mlcForHmlc.MLFOneMeasure
 
getName() - Method in class si.ijs.kt.clus.error.mlcForHmlc.MLpooledAUPRC
 
getName() - Method in class si.ijs.kt.clus.error.mlcForHmlc.MLPrecision
 
getName() - Method in class si.ijs.kt.clus.error.mlcForHmlc.MLRecall
 
getName() - Method in class si.ijs.kt.clus.error.mlcForHmlc.MLweightedAUPRC
 
getName() - Method in class si.ijs.kt.clus.error.mlcForHmlc.OneError
 
getName() - Method in class si.ijs.kt.clus.error.mlcForHmlc.RankingLoss
 
getName() - Method in class si.ijs.kt.clus.error.mlcForHmlc.SubsetAccuracy
 
getName() - Method in class si.ijs.kt.clus.error.MSError
 
getName() - Method in class si.ijs.kt.clus.error.MSNominalError
 
getName() - Method in class si.ijs.kt.clus.error.NominalCorrelation
 
getName() - Method in class si.ijs.kt.clus.error.PearsonCorrelation
 
getName() - Method in class si.ijs.kt.clus.error.RelativeError
 
getName() - Method in class si.ijs.kt.clus.error.RMSError
 
getName() - Method in class si.ijs.kt.clus.error.RRMSError
 
getName() - Method in class si.ijs.kt.clus.error.sets.Accuracy
 
getName() - Method in class si.ijs.kt.clus.error.sets.F1Score
 
getName() - Method in class si.ijs.kt.clus.error.sets.HammingLossError
 
getName() - Method in class si.ijs.kt.clus.error.sets.Precision
 
getName() - Method in class si.ijs.kt.clus.error.sets.Recall
 
getName() - Method in class si.ijs.kt.clus.error.sets.SubsetAccuracy
 
getName() - Method in class si.ijs.kt.clus.error.SpearmanRankCorrelation
 
getName() - Method in class si.ijs.kt.clus.error.SpearmanRankCorrelationPerExample
 
getName() - Method in class si.ijs.kt.clus.error.WAHNDError
 
getName() - Method in class si.ijs.kt.clus.ext.beamsearch.ClusBeamHeuristicError
 
getName() - Method in class si.ijs.kt.clus.ext.beamsearch.ClusBeamHeuristicMEstimate
 
getName() - Method in class si.ijs.kt.clus.ext.beamsearch.ClusBeamHeuristicMorishita
 
getName() - Method in class si.ijs.kt.clus.ext.beamsearch.ClusBeamHeuristicSS
 
getName() - Method in class si.ijs.kt.clus.ext.hierarchical.HierNodeWeights
 
getName() - Method in class si.ijs.kt.clus.ext.hierarchicalmtr.ClusHMTRNode
 
getName() - Method in class si.ijs.kt.clus.ext.ilevelc.ILevelCRandIndex
 
getName() - Method in class si.ijs.kt.clus.ext.semisupervised.ModifiedGainHeuristic
 
getName() - Method in class si.ijs.kt.clus.ext.timeseries.TimeSeriesSignificantChangeTesterXVAL
 
getName() - Method in class si.ijs.kt.clus.heuristic.ClusHeuristic
 
getName() - Method in class si.ijs.kt.clus.heuristic.GainHeuristic
 
getName() - Method in class si.ijs.kt.clus.heuristic.GeneticDistanceHeuristic
 
getName() - Method in class si.ijs.kt.clus.heuristic.GeneticDistanceHeuristicMatrix
 
getName() - Method in class si.ijs.kt.clus.heuristic.GISHeuristic
 
getName() - Method in class si.ijs.kt.clus.heuristic.hierarchical.ClusRuleHeuristicHierarchical
 
getName() - Method in class si.ijs.kt.clus.heuristic.ReducedErrorHeuristic
 
getName() - Method in class si.ijs.kt.clus.heuristic.rules.ClusRuleHeuristicDispersionAdt
 
getName() - Method in class si.ijs.kt.clus.heuristic.rules.ClusRuleHeuristicDispersionMlt
 
getName() - Method in class si.ijs.kt.clus.heuristic.rules.ClusRuleHeuristicError
 
getName() - Method in class si.ijs.kt.clus.heuristic.rules.ClusRuleHeuristicMEstimate
 
getName() - Method in class si.ijs.kt.clus.heuristic.rules.ClusRuleHeuristicRDispersionAdt
 
getName() - Method in class si.ijs.kt.clus.heuristic.rules.ClusRuleHeuristicRDispersionMlt
 
getName() - Method in class si.ijs.kt.clus.heuristic.rules.ClusRuleHeuristicSSD
 
getName() - Method in class si.ijs.kt.clus.heuristic.VarianceReductionHeuristic
 
getName() - Method in class si.ijs.kt.clus.heuristic.VarianceReductionHeuristicCompatibility
 
getName() - Method in class si.ijs.kt.clus.heuristic.VarianceReductionHeuristicEfficient
 
getName() - Method in class si.ijs.kt.clus.heuristic.VarianceReductionHeuristicInclMissingValues
 
getName() - Method in class si.ijs.kt.clus.model.ClusModelInfo
 
getName() - Method in class si.ijs.kt.clus.util.jeans.io.ini.INIFileNode
 
getName() - Method in class si.ijs.kt.clus.util.jeans.tree.BinaryNode
 
getName() - Method in class si.ijs.kt.clus.util.tools.manual.ManualEntry
 
getName(int) - Method in class si.ijs.kt.clus.util.jeans.io.range.NominalType
 
getName(String) - Static method in class si.ijs.kt.clus.util.jeans.util.FileUtil
Return the Name of a given File (without the Extension).
getName(ClusAttrType[]) - Method in class si.ijs.kt.clus.data.attweights.ClusAttributeWeights
 
getName(ClusAttrType[]) - Method in class si.ijs.kt.clus.data.attweights.ClusNormalizedAttributeWeights
 
getNbAllAttrUse(ClusAttrType.AttributeUseType) - Method in class si.ijs.kt.clus.data.ClusSchema
 
getNbAttributes() - Method in class si.ijs.kt.clus.data.attweights.ClusAttributeWeights
 
getNbAttributes() - Method in class si.ijs.kt.clus.data.ClusSchema
Methods for retrieving attribute types *
getNbAttributes() - Method in class si.ijs.kt.clus.data.cols.ColTarget
 
getNbAttributes() - Method in class si.ijs.kt.clus.data.io.ClusView
 
getNbAttributes() - Method in class si.ijs.kt.clus.statistic.ClusStatistic
 
getNbAttributes() - Method in class si.ijs.kt.clus.statistic.RegressionStatBase
 
getNbBaggingSets() - Method in class si.ijs.kt.clus.main.settings.section.SettingsEnsemble
 
getNbBits() - Method in class si.ijs.kt.clus.data.type.BitwiseNominalAttrType
 
getNbCandidates() - Method in class si.ijs.kt.clus.ext.optiontree.FindBestTests
 
getNbChildren() - Method in class si.ijs.kt.clus.ext.ensemble.ros.ClusROSModelInfo
 
getNbChildren() - Method in class si.ijs.kt.clus.ext.hierarchical.ClassTerm
 
getNbChildren() - Method in class si.ijs.kt.clus.ext.optiontree.MyNode
 
getNbChildren() - Method in interface si.ijs.kt.clus.ext.optiontree.Node
 
getNbChildren() - Method in class si.ijs.kt.clus.model.test.NodeTest
 
getNbChildren() - Method in class si.ijs.kt.clus.util.jeans.tree.BinaryNode
 
getNbChildren() - Method in class si.ijs.kt.clus.util.jeans.tree.MyNode
 
getNbChildren() - Method in interface si.ijs.kt.clus.util.jeans.tree.Node
 
getNbChildren() - Method in class si.ijs.kt.clus.util.jeans.tree.SimpleNode
 
getNbChildren() - Method in class si.ijs.kt.clus.util.jeans.tree.VisitableNode
 
getNbClasses() - Method in class si.ijs.kt.clus.ext.hierarchical.ClassesTuple
 
getNbClasses(int) - Method in class si.ijs.kt.clus.statistic.ClassificationStat
 
getNbClusteringAttributes() - Method in class si.ijs.kt.clus.data.ClusSchema
 
getNbClusters() - Method in class si.ijs.kt.clus.heuristic.EncodingCost
 
getNbCover() - Method in class si.ijs.kt.clus.error.common.ClusError
 
getNbCover() - Method in class si.ijs.kt.clus.error.common.ClusErrorList
 
getNbDescriptiveAttributes() - Method in class si.ijs.kt.clus.data.ClusSchema
 
getNbDoubles() - Method in class si.ijs.kt.clus.data.ClusSchema
 
getNbElements() - Method in class si.ijs.kt.clus.selection.XValGroup
 
getNbErrors() - Method in class si.ijs.kt.clus.error.common.ClusErrorList
 
getNbExamples() - Method in class si.ijs.kt.clus.data.rows.MemoryTupleIterator
 
getNbExamples() - Method in class si.ijs.kt.clus.error.common.ClusError
 
getNbExamples() - Method in class si.ijs.kt.clus.error.common.ClusErrorList
 
getNbExamples() - Method in class si.ijs.kt.clus.statistic.ClusStatistic
 
getNbFeatureRankings() - Method in class si.ijs.kt.clus.ext.featureRanking.ClusFeatureRanking
 
getNbFolds() - Method in class si.ijs.kt.clus.ext.optxval.OptXValGroup
 
getNbFolds() - Method in class si.ijs.kt.clus.selection.XValMainSelection
 
getNbHMTRAttributes() - Method in class si.ijs.kt.clus.data.ClusSchema
 
getNbIntervals() - Method in class si.ijs.kt.clus.util.jeans.util.IntervalCollection
 
getNbInts() - Method in class si.ijs.kt.clus.data.ClusSchema
 
getNbIterations() - Method in class si.ijs.kt.clus.ext.featureRanking.relief.ReliefModel
 
getNbLeaf() - Method in class si.ijs.kt.clus.algo.tdidt.ClusNode
 
getNbLeaves() - Method in class si.ijs.kt.clus.ext.hierarchical.ClassTerm
 
getNbLeaves() - Method in class si.ijs.kt.clus.ext.optiontree.MyNode
 
getNbLeaves() - Method in interface si.ijs.kt.clus.ext.optiontree.Node
 
getNbLevels() - Method in class si.ijs.kt.clus.ext.hierarchical.ClassesValue
 
getNbLines() - Method in class si.ijs.kt.clus.model.test.FakeTest
 
getNbLines() - Method in class si.ijs.kt.clus.model.test.NodeTest
 
getNbLiterals() - Method in class si.ijs.kt.clus.algo.rules.ClusRuleSet
How many literals in all of the rules.
getNbMainArgs() - Method in class si.ijs.kt.clus.addon.hmc.ClusAmandaRules.ClusAmandaRules
 
getNbMainArgs() - Method in class si.ijs.kt.clus.addon.hmc.HMCAverageSingleClass.HMCAverageSingleClass
 
getNbMainArgs() - Method in class si.ijs.kt.clus.addon.hmc.HMCNodeWiseModels.hmcnwmodels.HMCNodeWiseModels
 
getNbMainArgs() - Method in class si.ijs.kt.clus.addon.sit.Sit
 
getNbMainArgs() - Method in class si.ijs.kt.clus.Clus
 
getNbMainArgs() - Method in class si.ijs.kt.clus.util.jeans.util.cmdline.CMDLineArgs
 
getNbMainArgs() - Method in interface si.ijs.kt.clus.util.jeans.util.cmdline.CMDLineArgsProvider
 
getNbMissing() - Method in class si.ijs.kt.clus.data.type.ClusAttrType
 
getNbMissingTargets() - Method in class si.ijs.kt.clus.data.rows.DataTuple
Returns the number of missing values among target attributes
getNbModels() - Method in class si.ijs.kt.clus.addon.hmc.HMCAverageSingleClass.HMCAverageNodeWiseModels
 
getNbModels() - Method in class si.ijs.kt.clus.ext.ensemble.ClusForest
 
getNbModels() - Method in class si.ijs.kt.clus.main.ClusModelInfoList
************************************************************************* Iterating over models *************************************************************************
getNbModels() - Method in class si.ijs.kt.clus.model.ClusModelInfo
 
getNbModels() - Method in class si.ijs.kt.clus.model.io.ClusModelCollectionIO
 
getNbModelsOld() - Method in class si.ijs.kt.clus.ext.ensemble.ClusForest
Deprecated.
getNbNeg() - Method in class si.ijs.kt.clus.error.BinaryPredictionList
 
getNbNeighbours() - Method in class si.ijs.kt.clus.ext.featureRanking.relief.ReliefModel
 
getNbNodes() - Method in class si.ijs.kt.clus.algo.tdidt.ClusNode
 
getNbNodes() - Method in class si.ijs.kt.clus.ext.optiontree.MyNode
 
getNbNodes() - Method in interface si.ijs.kt.clus.ext.optiontree.Node
 
getNbNodes() - Method in class si.ijs.kt.clus.util.jeans.io.ini.INIFileSection
 
getNbNom() - Method in class si.ijs.kt.clus.data.cols.ColTarget
 
getNbNominalAttributes() - Method in class si.ijs.kt.clus.statistic.ClassificationStat
 
getNbNominalAttributes() - Method in class si.ijs.kt.clus.statistic.ClusStatistic
 
getNbNominalAttributes() - Method in class si.ijs.kt.clus.statistic.CombStat
 
getNbNominalAttrUse(ClusAttrType.AttributeUseType) - Method in class si.ijs.kt.clus.data.ClusSchema
 
getNbNominalDescriptiveAttributes() - Method in class si.ijs.kt.clus.data.ClusSchema
 
getNbNominalTargetAttributes() - Method in class si.ijs.kt.clus.data.ClusSchema
 
getNbNonZero() - Method in interface si.ijs.kt.clus.util.jeans.math.matrix.MySparseVector
 
getNbNum() - Method in class si.ijs.kt.clus.data.cols.ColTarget
 
getNbNumericAttributes() - Method in class si.ijs.kt.clus.statistic.ClusStatistic
 
getNbNumericAttributes() - Method in class si.ijs.kt.clus.statistic.CombStat
 
getNbNumericAttributes() - Method in class si.ijs.kt.clus.statistic.RegressionStatBase
 
getNbNumericAttrUse(ClusAttrType.AttributeUseType) - Method in class si.ijs.kt.clus.data.ClusSchema
 
getNbNumericDescriptiveAttributes() - Method in class si.ijs.kt.clus.data.ClusSchema
 
getNbNumericTargetAttributes() - Method in class si.ijs.kt.clus.data.ClusSchema
 
getNbObjects() - Method in class si.ijs.kt.clus.data.ClusSchema
 
getNbOfInstances() - Method in class si.ijs.kt.clus.util.tools.optimization.OptimizationProblem
 
getNbOfTargets() - Method in class si.ijs.kt.clus.util.tools.optimization.OptimizationProblem
 
getNbOnes() - Method in class si.ijs.kt.clus.util.jeans.list.BitList
 
getNbOptionNodes() - Method in class si.ijs.kt.clus.ext.optiontree.MyNode
 
getNbOptions() - Method in class si.ijs.kt.clus.ext.optiontree.MyNode
 
getNbParents() - Method in class si.ijs.kt.clus.ext.hierarchical.ClassTerm
 
getNbPasses() - Method in class si.ijs.kt.clus.data.rows.DataPreprocs
 
getNbPasses() - Method in interface si.ijs.kt.clus.data.rows.TuplePreproc
 
getNbPasses() - Method in class si.ijs.kt.clus.ext.hierarchical.ClassHierarchyPreproc
 
getNbPos() - Method in class si.ijs.kt.clus.error.BinaryPredictionList
 
getNbPosExamplesCheck() - Method in class si.ijs.kt.clus.error.hmlc.HierClassWiseAccuracy
 
getNbPredictedClasses() - Method in class si.ijs.kt.clus.statistic.WHTDStatistic
 
getNbRandomAttrSelected() - Method in class si.ijs.kt.clus.main.settings.section.SettingsEnsemble
 
getNbRandomAttrString() - Method in class si.ijs.kt.clus.main.settings.section.SettingsEnsemble
 
getNbRandomTargetAttrString() - Method in class si.ijs.kt.clus.main.settings.section.SettingsEnsemble
 
getNbResults() - Method in class si.ijs.kt.clus.ext.hierarchical.HierClassTresholdPruner
 
getNbResults() - Method in class si.ijs.kt.clus.ext.hierarchical.HierRemoveInsigClasses
 
getNbResults() - Method in class si.ijs.kt.clus.pruning.BottomUpPruningVSB
 
getNbResults() - Method in class si.ijs.kt.clus.pruning.C45Pruner
 
getNbResults() - Method in class si.ijs.kt.clus.pruning.CartPruning
 
getNbResults() - Method in class si.ijs.kt.clus.pruning.EncodingCostPruning
 
getNbResults() - Method in class si.ijs.kt.clus.pruning.M5Pruner
 
getNbResults() - Method in class si.ijs.kt.clus.pruning.M5PrunerMulti
 
getNbResults() - Method in class si.ijs.kt.clus.pruning.PruneTree
 
getNbResults() - Method in class si.ijs.kt.clus.pruning.SequencePruningVSB
 
getNbResults() - Method in class si.ijs.kt.clus.pruning.SizeConstraintPruning
 
getNbRows() - Method in class si.ijs.kt.clus.Clus
 
getNbRows() - Method in class si.ijs.kt.clus.data.ClusData
 
getNbRows() - Method in class si.ijs.kt.clus.data.cols.ColTarget
 
getNbRows() - Method in class si.ijs.kt.clus.data.type.primitive.IndexAttrType
 
getNbRows() - Method in class si.ijs.kt.clus.selection.ClusSelection
 
getNbRows() - Method in class si.ijs.kt.clus.selection.XValMainSelection
 
getNbRuns() - Method in class si.ijs.kt.clus.main.ClusSummary
 
getNbSections() - Method in class si.ijs.kt.clus.util.jeans.io.ini.INIFileSectionGroup
 
getNbSelected() - Method in class si.ijs.kt.clus.selection.BagSelection
 
getNbSelected() - Method in class si.ijs.kt.clus.selection.BitMapSelection
 
getNbSelected() - Method in class si.ijs.kt.clus.selection.ClusSelection
 
getNbSelected() - Method in class si.ijs.kt.clus.selection.OOBSelection
 
getNbSelected() - Method in class si.ijs.kt.clus.selection.OverSample
 
getNbSelected() - Method in class si.ijs.kt.clus.selection.RandomSelection
 
getNbSelected() - Method in class si.ijs.kt.clus.selection.XValSelection
 
getNbSelected(int) - Method in class si.ijs.kt.clus.selection.XValMainSelection
 
getNbStatisticComponents() - Method in class si.ijs.kt.clus.error.common.multiscore.MultiScoreStat
 
getNbStatisticComponents() - Method in class si.ijs.kt.clus.statistic.BitVectorStat
 
getNbStatisticComponents() - Method in class si.ijs.kt.clus.statistic.ClassificationStat
 
getNbStatisticComponents() - Method in class si.ijs.kt.clus.statistic.ClusStatistic
 
getNbStatisticComponents() - Method in class si.ijs.kt.clus.statistic.CombStat
 
getNbStatisticComponents() - Method in interface si.ijs.kt.clus.statistic.ComponentStatistic
 
getNbStatisticComponents() - Method in class si.ijs.kt.clus.statistic.GeneticDistanceStat
 
getNbStatisticComponents() - Method in class si.ijs.kt.clus.statistic.RegressionStat
 
getNbStatisticComponents() - Method in class si.ijs.kt.clus.statistic.RegressionStatBinaryNomiss
 
getNbTarget() - Method in class si.ijs.kt.clus.error.common.multiscore.MultiScore
 
getNbTargetAttributes() - Method in class si.ijs.kt.clus.data.ClusSchema
 
getNbTargetAttributes() - Method in class si.ijs.kt.clus.ext.semisupervised.confidence.classification.ClassesProbabilities
 
getNbTargetAttributes() - Method in class si.ijs.kt.clus.ext.semisupervised.confidence.PredictionConfidence
 
getNbTotal() - Method in class si.ijs.kt.clus.error.common.ClusError
 
getNbTotal() - Method in class si.ijs.kt.clus.error.common.ClusErrorList
 
getNbTrees() - Method in class si.ijs.kt.clus.ext.optiontree.MyNode
 
getNbTrees(int) - Method in class si.ijs.kt.clus.ext.ensemble.ClusEnsembleInduce
 
getNbTuples() - Method in class si.ijs.kt.clus.statistic.BitVectorStat
 
getNbUnlabeled() - Method in class si.ijs.kt.clus.data.rows.RowData
Returns the number of unlabeled examples (example is considered unlabeled if all of its target attributes are missing)
getNbValues() - Method in class si.ijs.kt.clus.data.type.primitive.NominalAttrType
Number of possible values for nominal type.
getNbValues() - Method in class si.ijs.kt.clus.model.test.SubsetTest
 
getNbValuesInclMissing() - Method in class si.ijs.kt.clus.data.type.primitive.NominalAttrType
 
getNecessaryDescriptiveAttributes(RowData) - Static method in class si.ijs.kt.clus.algo.kNN.KnnClassifier
 
getNew(int) - Method in class si.ijs.kt.clus.ext.ensemble.ClusOOBWeights
 
getNew(int) - Method in class si.ijs.kt.clus.ext.ensemble.ros.ClusROSForestInfo
 
getNew(int, ClusROSForestInfo) - Method in class si.ijs.kt.clus.ext.ensemble.ros.ClusROSOOBWeights
 
getNext() - Method in class si.ijs.kt.clus.util.jeans.util.list.MyListIter
 
getNextChar() - Method in class si.ijs.kt.clus.data.io.ClusReader
 
getNextChar(Reader) - Method in class si.ijs.kt.clus.data.io.ClusReader
 
getNextCharNoSpace() - Method in class si.ijs.kt.clus.data.io.ClusReader
 
getNextElem() - Method in class si.ijs.kt.clus.util.jeans.util.list.MyList
 
getNextNode() - Method in class si.ijs.kt.clus.util.jeans.tree.BottomLevelIterator
 
getNextNode() - Method in class si.ijs.kt.clus.util.jeans.tree.CompleteTreeIterator
 
getNextNode() - Method in class si.ijs.kt.clus.util.jeans.tree.LeafTreeIterator
 
getNode() - Method in class si.ijs.kt.clus.ext.ensemble.container.NodeDepthPair
 
getNode() - Method in class si.ijs.kt.clus.util.jeans.tree.TreeIterator
 
getNode(int) - Method in class si.ijs.kt.clus.ext.optxval.OptXValGroup
 
getNode(String) - Method in class si.ijs.kt.clus.util.jeans.io.ini.INIFileSection
 
getNodeData(RowData, int) - Method in class si.ijs.kt.clus.addon.hmc.HMCNodeWiseModels.hmcnwmodels.HMCNodeWiseModels
 
getNodes() - Method in class si.ijs.kt.clus.data.cols.ColTarget
 
getNodes() - Method in class si.ijs.kt.clus.ext.hierarchicalmtr.ClusHMTRHierarchy
 
getNodes() - Method in class si.ijs.kt.clus.ext.optxval.OptXValBinTree
 
getNodes() - Method in class si.ijs.kt.clus.ext.optxval.OptXValGroup
 
getNodes() - Method in class si.ijs.kt.clus.ext.optxval.OptXValNode
 
getNodes() - Method in class si.ijs.kt.clus.util.jeans.io.ini.INIFileSection
 
getNominal() - Method in class si.ijs.kt.clus.main.settings.Settings
 
getNominal() - Method in class si.ijs.kt.clus.util.jeans.io.ini.INIFileNominalOrDoubleOrVector
 
getNominal() - Method in class si.ijs.kt.clus.util.jeans.io.ini.INIFileNominalOrIntOrVector
 
getNominal(int) - Method in class si.ijs.kt.clus.data.ClusData
 
getNominal(int) - Method in class si.ijs.kt.clus.data.cols.ColTarget
 
getNominal(int) - Method in class si.ijs.kt.clus.data.rows.RowData
 
getNominal(int) - Method in class si.ijs.kt.clus.util.jeans.io.ini.INIFileNominalOrDoubleOrVector
 
getNominal(int) - Method in class si.ijs.kt.clus.util.jeans.io.ini.INIFileNominalOrIntOrVector
 
getNominal(DataTuple) - Method in class si.ijs.kt.clus.data.type.BitwiseNominalAttrType
 
getNominal(DataTuple) - Method in class si.ijs.kt.clus.data.type.ClusAttrType
 
getNominal(DataTuple) - Method in class si.ijs.kt.clus.data.type.primitive.NominalAttrType
 
getNominalAttrUse(ClusAttrType.AttributeUseType) - Method in class si.ijs.kt.clus.data.ClusSchema
 
getNominalPred() - Method in class si.ijs.kt.clus.error.common.multiscore.MultiScoreStat
 
getNominalPred() - Method in class si.ijs.kt.clus.statistic.BitVectorStat
 
getNominalPred() - Method in class si.ijs.kt.clus.statistic.ClassificationStat
 
getNominalPred() - Method in class si.ijs.kt.clus.statistic.ClusStatistic
 
getNominalPred() - Method in class si.ijs.kt.clus.statistic.CombStat
 
getNominalPred() - Method in class si.ijs.kt.clus.statistic.GeneticDistanceStat
 
getNominalString(int) - Method in class si.ijs.kt.clus.util.jeans.io.ini.INIFileNominalOrDoubleOrVector
 
getNominalString(int) - Method in class si.ijs.kt.clus.util.jeans.io.ini.INIFileNominalOrIntOrVector
 
getNominalType() - Method in class si.ijs.kt.clus.data.cols.attribute.NominalAttrBase
 
getNominalVector() - Method in class si.ijs.kt.clus.util.jeans.io.ini.INIFileNominalOrIntOrVector
 
getNonSparseAttributes() - Method in class si.ijs.kt.clus.data.ClusSchema
 
getNormalization() - Method in class si.ijs.kt.clus.ext.semisupervised.confidence.PredictionConfidence
 
getNormalizationWeight(ClusAttrType) - Method in class si.ijs.kt.clus.data.attweights.ClusNormalizedAttributeWeights
 
getNormalizationWeights() - Method in class si.ijs.kt.clus.data.attweights.ClusNormalizedAttributeWeights
 
getNormalizationWeights() - Method in class si.ijs.kt.clus.main.ClusStatManager
 
getNormalizationWeights() - Method in class si.ijs.kt.clus.main.settings.section.SettingsAttribute
 
getNormalizeData() - Method in class si.ijs.kt.clus.main.settings.section.SettingsData
Do we want to normalize the data
getNormFactor(int) - Method in class si.ijs.kt.clus.util.tools.optimization.OptimizationProblem
For normalization during optimization, the scaling factor for each of the targets.
getNoRootIter() - Method in class si.ijs.kt.clus.ext.hierarchical.ClassHierarchy
 
getNumberOfChildren() - Method in class si.ijs.kt.clus.ext.hierarchicalmtr.ClusHMTRNode
 
getNumberOfPossibleValues() - Method in class si.ijs.kt.clus.data.type.complex.SetAttrType
 
getNumberOfSampledRuleSets() - Method in class si.ijs.kt.clus.main.settings.section.SettingsRules
Number of generated rule sets
getNumberOfThreads() - Method in class si.ijs.kt.clus.main.settings.section.SettingsEnsemble
 
getNumberOfTreesSupervisionOptimisation(int) - Method in class si.ijs.kt.clus.main.settings.section.SettingsSSL
If the number of trees for internal cross-validation was specified, this number is returned.
getNumberOfViolatedConstraints() - Method in class si.ijs.kt.clus.algo.rules.ClusRule
 
getNumberOfViolatedConstraintsRCCC() - Method in class si.ijs.kt.clus.algo.rules.ClusRule
 
getNumberSubmodels() - Method in class si.ijs.kt.clus.algo.tdidt.ClusNode
 
getNumeric(int) - Method in class si.ijs.kt.clus.data.ClusData
 
getNumeric(int) - Method in class si.ijs.kt.clus.data.cols.ColTarget
 
getNumeric(int) - Method in class si.ijs.kt.clus.data.rows.RowData
 
getNumeric(DataTuple) - Method in class si.ijs.kt.clus.data.type.ClusAttrType
 
getNumeric(DataTuple) - Method in class si.ijs.kt.clus.data.type.primitive.NumericAttrType
 
getNumeric(DataTuple) - Method in class si.ijs.kt.clus.data.type.primitive.SparseNumericAttrType
 
getNumericAttrUse(ClusAttrType.AttributeUseType) - Method in class si.ijs.kt.clus.data.ClusSchema
Returns all the numeric attributes that are of the given type.
getNumericPred() - Method in class si.ijs.kt.clus.error.common.multiscore.MultiScoreStat
 
getNumericPred() - Method in class si.ijs.kt.clus.statistic.BitVectorStat
 
getNumericPred() - Method in class si.ijs.kt.clus.statistic.ClassificationStat
 
getNumericPred() - Method in class si.ijs.kt.clus.statistic.ClusStatistic
 
getNumericPred() - Method in class si.ijs.kt.clus.statistic.CombStat
 
getNumericPred() - Method in class si.ijs.kt.clus.statistic.RegressionStatBase
 
getNumNeightbours() - Method in class si.ijs.kt.clus.main.settings.section.SettingsTree
 
getNumType() - Method in class si.ijs.kt.clus.model.test.ClusRuleConstraintInduceTest
 
getNumType() - Method in class si.ijs.kt.clus.model.test.NumericTest
 
getNumVar() - Method in class si.ijs.kt.clus.util.tools.optimization.OptimizationProblem
Number of variables to be optimized
getObj1() - Method in class si.ijs.kt.clus.util.jeans.util.compound.DuoObject
 
getObj2() - Method in class si.ijs.kt.clus.util.jeans.util.compound.DuoObject
 
getObject() - Method in class si.ijs.kt.clus.ext.beamsearch.ClusBeamTreeElem
 
getObject() - Method in class si.ijs.kt.clus.ext.beamsearch.ClusBeamTreeElemOld
 
getObject() - Method in class si.ijs.kt.clus.util.jeans.util.compound.DoubleObject
 
getObject() - Method in class si.ijs.kt.clus.util.jeans.util.compound.IntObject
 
getObjects() - Method in class si.ijs.kt.clus.data.rows.DataTuple
 
getObjects() - Method in class si.ijs.kt.clus.util.jeans.util.MyArray
 
getObjVal(int) - Method in class si.ijs.kt.clus.data.rows.DataTuple
 
getOnlyTargets(int[]) - Method in class si.ijs.kt.clus.ext.ensemble.ros.ClusEnsembleROSInfo
 
getOOBCounts() - Method in class si.ijs.kt.clus.selection.OOBSelection
 
getOOBError(RowData, int) - Method in class si.ijs.kt.clus.ext.semisupervised.ClusSemiSupervisedInduce
TODO: THIS SHOULD BE DELETED AND RE-IMPLEMENTED TO WORK DIRECTLY IN CLUS FOREST CLASS Return Out of Bag Error Estimate of the ClusForest model.
getOOBErrorCalculation() - Method in class si.ijs.kt.clus.main.settings.section.SettingsSSL
 
getOOBVotes(DataTuple) - Method in class si.ijs.kt.clus.ext.ensemble.ClusForest
Votes from models for which the tuple was Out Of Bag.
getOppositeAlternatives() - Method in class si.ijs.kt.clus.algo.tdidt.ClusNode
 
getOptAddLinearTerms() - Method in class si.ijs.kt.clus.main.settings.section.SettingsRules
How we add linear terms to rule set.
getOptDECrossProb() - Method in class si.ijs.kt.clus.main.settings.section.SettingsRules
 
getOptDELossFunction() - Method in class si.ijs.kt.clus.main.settings.section.SettingsRules
Type of Loss function for DE optimization
getOptDENumEval() - Method in class si.ijs.kt.clus.main.settings.section.SettingsRules
 
getOptDEPopSize() - Method in class si.ijs.kt.clus.main.settings.section.SettingsRules
 
getOptDEProbMutationNonZero() - Method in class si.ijs.kt.clus.main.settings.section.SettingsRules
DE A reverse for the zeroing.
getOptDEProbMutationZero() - Method in class si.ijs.kt.clus.main.settings.section.SettingsRules
DE A probability to mutate certain value to zero.
getOptDERegulPower() - Method in class si.ijs.kt.clus.main.settings.section.SettingsRules
Power for regularization parameter
getOptDESeed() - Method in class si.ijs.kt.clus.main.settings.section.SettingsRules
 
getOptDEWeight() - Method in class si.ijs.kt.clus.main.settings.section.SettingsRules
 
getOptGDEarlyStopAmount() - Method in class si.ijs.kt.clus.main.settings.section.SettingsRules
Amount of data used for early stopping check.
getOptGDEarlyStopTreshold() - Method in class si.ijs.kt.clus.main.settings.section.SettingsRules
Early stopping criterion treshold
getOptGDEarlyTTryStop() - Method in class si.ijs.kt.clus.main.settings.section.SettingsRules
GD When running from T=1 down, do we stop if the error starts to increase.
getOptGDExternalMethod() - Method in class si.ijs.kt.clus.main.settings.section.SettingsRules
What method we use for external GD optimization algorithm
getOptGDGradTreshold() - Method in class si.ijs.kt.clus.main.settings.section.SettingsRules
GD Treshold [0,1] for changing the gradient.
getOptGDLossFunction() - Method in class si.ijs.kt.clus.main.settings.section.SettingsRules
GD The used loss function
getOptGDMaxIter() - Method in class si.ijs.kt.clus.main.settings.section.SettingsRules
GD Maximum amount of iterations
getOptGDMaxNbWeights() - Method in class si.ijs.kt.clus.main.settings.section.SettingsRules
GD Maximum number of nonzero weights.
getOptGDMTGradientCombine() - Method in class si.ijs.kt.clus.main.settings.section.SettingsRules
GD How to combine multiple targets to single gradient value for step taking
getOptGDNbOfStepSizeReduce() - Method in class si.ijs.kt.clus.main.settings.section.SettingsRules
GD When early stopping is found, how many times we try to reduce the step size and try again Default is 0, but can be Infinity.
getOptGDNbOfTParameterTry() - Method in class si.ijs.kt.clus.main.settings.section.SettingsRules
GD How many different parameter combinations we try for T.
getOptGDStepSize() - Method in class si.ijs.kt.clus.main.settings.section.SettingsRules
GD Step size ]0,1] for each iteration.
getOptHuberAlpha() - Method in class si.ijs.kt.clus.main.settings.section.SettingsRules
For Huber 1962 loss function an alpha value for outliers has to be given.
getOptionArgArities() - Method in class si.ijs.kt.clus.addon.hmc.ClusAmandaRules.ClusAmandaRules
 
getOptionArgArities() - Method in class si.ijs.kt.clus.addon.hmc.HMCAverageSingleClass.HMCAverageSingleClass
 
getOptionArgArities() - Method in class si.ijs.kt.clus.addon.hmc.HMCNodeWiseModels.hmcnwmodels.HMCNodeWiseModels
 
getOptionArgArities() - Method in class si.ijs.kt.clus.addon.sit.Sit
 
getOptionArgArities() - Method in class si.ijs.kt.clus.Clus
 
getOptionArgArities() - Method in interface si.ijs.kt.clus.util.jeans.util.cmdline.CMDLineArgsProvider
 
getOptionArgs() - Method in class si.ijs.kt.clus.addon.hmc.ClusAmandaRules.ClusAmandaRules
 
getOptionArgs() - Method in class si.ijs.kt.clus.addon.hmc.HMCAverageSingleClass.HMCAverageSingleClass
 
getOptionArgs() - Method in class si.ijs.kt.clus.addon.hmc.HMCNodeWiseModels.hmcnwmodels.HMCNodeWiseModels
 
getOptionArgs() - Method in class si.ijs.kt.clus.addon.sit.Sit
 
getOptionArgs() - Method in class si.ijs.kt.clus.Clus
 
getOptionArgs() - Method in interface si.ijs.kt.clus.util.jeans.util.cmdline.CMDLineArgsProvider
 
getOptionDecayFactor() - Method in class si.ijs.kt.clus.main.settings.section.SettingsOptionTree
 
getOptionDouble(String, double, double) - Method in class si.ijs.kt.clus.util.jeans.util.cmdline.CMDLineArgs
 
getOptionEpsilon() - Method in class si.ijs.kt.clus.main.settings.section.SettingsOptionTree
 
getOptionInteger(String) - Method in class si.ijs.kt.clus.util.jeans.util.cmdline.CMDLineArgs
 
getOptionInteger(String, int, int) - Method in class si.ijs.kt.clus.util.jeans.util.cmdline.CMDLineArgs
 
getOptionList(String) - Method in class si.ijs.kt.clus.util.jeans.util.cmdline.CMDLineArgs
 
getOptionMaxDepthOfOptionNode() - Method in class si.ijs.kt.clus.main.settings.section.SettingsOptionTree
 
getOptionMaxNumberOfOptionsPerNode() - Method in class si.ijs.kt.clus.main.settings.section.SettingsOptionTree
 
getOptionTree() - Method in class si.ijs.kt.clus.main.settings.Settings
 
getOptionValue(String) - Method in class si.ijs.kt.clus.util.jeans.util.cmdline.CMDLineArgs
 
getOptionValue(String, int) - Method in class si.ijs.kt.clus.util.jeans.util.cmdline.CMDLineArgs
 
getOptionValues(String) - Method in class si.ijs.kt.clus.util.jeans.util.cmdline.CMDLineArgs
 
getOptNbZeroesPar() - Method in class si.ijs.kt.clus.main.settings.section.SettingsRules
Optimization regularization parameter - number of zeroes
getOptNormalization() - Method in class si.ijs.kt.clus.main.settings.section.SettingsRules
How we normalize the predictions and true values internally for optimization.
getOptNormalizeLinearTerms() - Method in class si.ijs.kt.clus.main.settings.section.SettingsRules
What kind of normalization are we using
getOptRegPar() - Method in class si.ijs.kt.clus.main.settings.section.SettingsRules
Optimization regularization parameter
getOptRuleWeightBinarization() - Method in class si.ijs.kt.clus.main.settings.section.SettingsRules
If this flag is set, weights higher than m_OptRuleWeightThreshold will get value 1, others will be set to 0
getOptRuleWeightThreshold() - Method in class si.ijs.kt.clus.main.settings.section.SettingsRules
 
getOptWeight() - Method in class si.ijs.kt.clus.algo.rules.ClusRule
 
getOriginalSet() - Method in class si.ijs.kt.clus.main.ClusRun
Original set
getOriginalTree() - Method in class si.ijs.kt.clus.pruning.PruneTree
 
getOthers() - Method in class si.ijs.kt.clus.ext.beamsearch.ClusBeamTreeElem
 
getOthersIterator() - Method in class si.ijs.kt.clus.ext.beamsearch.ClusBeamTreeElem
 
getOthersIterator() - Method in class si.ijs.kt.clus.ext.beamsearch.ClusBeamTreeElemOld
 
getOtherTupleIdx(DataTuple) - Method in class si.ijs.kt.clus.ext.ilevelc.ILevelConstraint
 
getOutput() - Method in class si.ijs.kt.clus.main.settings.Settings
 
getOverallAccuracy() - Method in class si.ijs.kt.clus.error.hmlc.HierLevelAccuracy
 
getOVFoldData(int) - Method in class si.ijs.kt.clus.data.rows.RowData
 
getParent() - Method in class si.ijs.kt.clus.error.common.ClusError
Old stuff - to be removed :-)
getParent() - Method in class si.ijs.kt.clus.ext.hierarchical.ClassTerm
 
getParent() - Method in class si.ijs.kt.clus.ext.optiontree.MyNode
 
getParent() - Method in interface si.ijs.kt.clus.ext.optiontree.Node
 
getParent() - Method in class si.ijs.kt.clus.util.jeans.io.ini.INIFileNode
 
getParent() - Method in class si.ijs.kt.clus.util.jeans.tree.BinaryNode
 
getParent() - Method in class si.ijs.kt.clus.util.jeans.tree.MyNode
 
getParent() - Method in interface si.ijs.kt.clus.util.jeans.tree.Node
 
getParent() - Method in class si.ijs.kt.clus.util.jeans.tree.SimpleNode
 
getParent() - Method in class si.ijs.kt.clus.util.jeans.tree.VisitableNode
 
getParent(int) - Method in class si.ijs.kt.clus.ext.hierarchical.ClassTerm
 
getParentModelIndex() - Method in class si.ijs.kt.clus.ext.beamsearch.ClusBeamModel
 
getParents(ClusHMTRNode) - Method in class si.ijs.kt.clus.ext.hierarchicalmtr.ClusHMTRHierarchy
 
getParentStat() - Method in class si.ijs.kt.clus.error.common.multiscore.MultiScoreStat
 
getParentStat() - Method in class si.ijs.kt.clus.statistic.BitVectorStat
 
getParentStat() - Method in class si.ijs.kt.clus.statistic.ClassificationStat
 
getParentStat() - Method in class si.ijs.kt.clus.statistic.ClusStatistic
 
getParentStat() - Method in class si.ijs.kt.clus.statistic.CombStat
 
getParentStat() - Method in class si.ijs.kt.clus.statistic.CombStatClassRegHier
 
getParentStat() - Method in class si.ijs.kt.clus.statistic.RegressionStat
 
getParentStat() - Method in class si.ijs.kt.clus.statistic.RegressionStatBinaryNomiss
 
getPath() - Method in class si.ijs.kt.clus.util.jeans.tree.MyNode
 
getPath(String) - Static method in class si.ijs.kt.clus.util.jeans.util.FileUtil
 
getPathName(String) - Method in class si.ijs.kt.clus.util.jeans.io.ini.INIFileNode
 
getPathNode(String) - Method in class si.ijs.kt.clus.util.jeans.io.ini.INIFileSection
 
getPathNode(String, int) - Method in class si.ijs.kt.clus.util.jeans.io.ini.INIFileSection
 
getPathNode(String, Class) - Method in class si.ijs.kt.clus.util.jeans.io.ini.INIFileSection
 
getPDistance(String[], String[]) - Method in class si.ijs.kt.clus.heuristic.GeneticDistanceHeuristic
 
getPearsonCorrelation(ArrayList<RowData[]>, int) - Static method in class si.ijs.kt.clus.addon.sit.Evaluator
 
getPearsonCorrelation(RowData[], int) - Static method in class si.ijs.kt.clus.addon.sit.Evaluator
 
getPercentageLabeled() - Method in class si.ijs.kt.clus.main.settings.section.SettingsSSL
 
getPerTargetConfidenceScores(int) - Method in class si.ijs.kt.clus.ext.semisupervised.confidence.PredictionConfidence
 
getPhylogeny() - Method in class si.ijs.kt.clus.main.settings.Settings
 
getPhylogenyCriterion() - Method in class si.ijs.kt.clus.main.settings.section.SettingsPhylogeny
 
getPhylogenyDistanceMatrix() - Method in class si.ijs.kt.clus.main.settings.section.SettingsPhylogeny
 
getPhylogenyDistancesVsParentStop() - Method in class si.ijs.kt.clus.main.settings.section.SettingsPhylogeny
 
getPhylogenyDistancesVsRootStop() - Method in class si.ijs.kt.clus.main.settings.section.SettingsPhylogeny
 
getPhylogenyDM() - Method in class si.ijs.kt.clus.main.settings.section.SettingsPhylogeny
 
getPhylogenyEntropyVsParentStop() - Method in class si.ijs.kt.clus.main.settings.section.SettingsPhylogeny
 
getPhylogenyEntropyVsRootStop() - Method in class si.ijs.kt.clus.main.settings.section.SettingsPhylogeny
 
getPhylogenySequence() - Method in class si.ijs.kt.clus.main.settings.section.SettingsPhylogeny
 
getPointwiseSquaredDistance(DataTuple) - Method in class si.ijs.kt.clus.statistic.WHTDStatistic
Compute squared distance between each of the tuple's target attributes and this statistic's mean.
getPointwiseSquaredDistance(DataTuple, ClusAttributeWeights) - Method in class si.ijs.kt.clus.statistic.RegressionStatBase
 
getPointwiseSquaredDistance(ClusStatistic) - Method in class si.ijs.kt.clus.statistic.ClassificationStat
 
getPopString() - Method in class si.ijs.kt.clus.util.tools.optimization.de.DEPopulation
 
getPosFreq() - Method in class si.ijs.kt.clus.model.test.NodeTest
 
getPosition() - Method in class si.ijs.kt.clus.main.settings.SettingsBase
Returns the position of this section in the INI file
getPosition() - Method in class si.ijs.kt.clus.util.jeans.util.MSStringTokenizer
 
getPosition() - Method in class si.ijs.kt.clus.util.jeans.util.MStreamTokenizer
 
getPosition(int) - Method in class si.ijs.kt.clus.ext.hierarchical.ClassesTuple
 
getPosition(int) - Method in interface si.ijs.kt.clus.util.jeans.math.matrix.MySparseVector
 
getPossible() - Method in class si.ijs.kt.clus.util.tools.manual.ManualEntry
 
getPosStat() - Method in class si.ijs.kt.clus.algo.split.CurrentBestTestAndHeuristic
 
getPosStat() - Method in class si.ijs.kt.clus.ext.optiontree.TestAndHeuristic
 
getPosWeight() - Method in class si.ijs.kt.clus.algo.split.CurrentBestTestAndHeuristic
Inspectors
getPosWeight() - Method in class si.ijs.kt.clus.ext.optiontree.TestAndHeuristic
Inspectors
getPRCurve() - Method in class si.ijs.kt.clus.error.ROCAndPRCurve
 
getPrecision() - Method in class si.ijs.kt.clus.error.hmlc.HierClassWiseAccuracy
 
getPrecisionAtRecall(int) - Method in class si.ijs.kt.clus.error.ROCAndPRCurve
 
getPredictedClassName(int) - Method in class si.ijs.kt.clus.error.common.multiscore.MultiScoreStat
 
getPredictedClassName(int) - Method in class si.ijs.kt.clus.statistic.BitVectorStat
 
getPredictedClassName(int) - Method in class si.ijs.kt.clus.statistic.ClassificationStat
 
getPredictedClassName(int) - Method in class si.ijs.kt.clus.statistic.ClusStatistic
 
getPredictedClassName(int) - Method in class si.ijs.kt.clus.statistic.CombStat
 
getPredictedClassName(int) - Method in class si.ijs.kt.clus.statistic.CombStatClassRegHier
 
getPredictedClassName(int) - Method in class si.ijs.kt.clus.statistic.RegressionStatBase
 
getPredictionForClassificationTuple(DataTuple) - Static method in class si.ijs.kt.clus.ext.ensemble.ClusOOBErrorEstimate
 
getPredictionForRegressionHMCTuple(DataTuple) - Static method in class si.ijs.kt.clus.ext.ensemble.ClusOOBErrorEstimate
 
getPredictionForTuple(DataTuple) - Method in class si.ijs.kt.clus.ext.beamsearch.ClusBeamModel
 
getPredictionLength(int) - Method in class si.ijs.kt.clus.ext.ensemble.ClusEnsembleInduceOptClassification
 
getPredictionLength(int) - Method in class si.ijs.kt.clus.ext.ensemble.ClusEnsembleInduceOptimization
 
getPredictionLength(int) - Method in class si.ijs.kt.clus.ext.ensemble.ClusEnsembleInduceOptRegHMLC
 
getPredictions(ClusRun) - Method in class si.ijs.kt.clus.ext.beamsearch.ClusBeamSyntacticConstraint
Dragi
getPredictions(ClusModel) - Method in class si.ijs.kt.clus.ext.beamsearch.ClusBeamModelDistance
 
getPredictionsDataSet(ClusModel, RowData, boolean) - Static method in class si.ijs.kt.clus.ext.beamsearch.ClusBeamModelDistance
 
getPredictionsWhenCovered(int, int, int) - Method in class si.ijs.kt.clus.util.tools.optimization.OptimizationProblem
Value of base function prediction in regression use when we already know that instance is covered! Use isCovered for this.
getPredictionsWhenCovered(int, int, int, int) - Method in class si.ijs.kt.clus.util.tools.optimization.OptimizationProblem
Value of base function prediction.
getPredictionTime() - Method in class si.ijs.kt.clus.main.ClusModelInfoList
 
getPredictionTimeAverage() - Method in class si.ijs.kt.clus.main.ClusModelInfoList
 
getPredictionTimeNbExamples() - Method in class si.ijs.kt.clus.main.ClusModelInfoList
 
getPredictionValue(int, int) - Method in class si.ijs.kt.clus.ext.ensemble.ClusEnsembleInduceOptRegHMLC
 
getPredictionValueClassification(int, int) - Method in class si.ijs.kt.clus.ext.ensemble.ClusEnsembleInduceOptClassification
 
getPredictionWriterString(DataTuple) - Method in class si.ijs.kt.clus.data.type.ClusAttrType
 
getPredictionWriterString(DataTuple) - Method in class si.ijs.kt.clus.data.type.hierarchies.ClassesAttrType
 
getPredictionWriterString(DataTuple) - Method in class si.ijs.kt.clus.data.type.hierarchies.ClassesAttrTypeSingleLabel
 
getPredictString() - Method in class si.ijs.kt.clus.statistic.ClusStatistic
 
getPredictString() - Method in class si.ijs.kt.clus.statistic.RegressionStatBase
 
getPredictString() - Method in class si.ijs.kt.clus.statistic.WHTDStatistic
 
getPredictWriterString() - Method in class si.ijs.kt.clus.statistic.ClassificationStat
 
getPredictWriterString() - Method in class si.ijs.kt.clus.statistic.ClusStatistic
 
getPredictWriterString() - Method in class si.ijs.kt.clus.statistic.CombStat
 
getPredictWriterString() - Method in class si.ijs.kt.clus.statistic.HierSingleLabelStat
 
getPredictWriterString() - Method in class si.ijs.kt.clus.statistic.RegressionStatBase
 
getPredictWriterString(DataTuple) - Method in class si.ijs.kt.clus.ext.ilevelc.ILevelCStatistic
 
getPredictWriterString(DataTuple) - Method in class si.ijs.kt.clus.ext.structuredTypes.SetStatistic
 
getPredictWriterString(DataTuple) - Method in class si.ijs.kt.clus.ext.structuredTypes.TupleStatistic
 
getPredictWriterString(DataTuple) - Method in class si.ijs.kt.clus.ext.timeseries.TimeSeriesStat
 
getPredictWriterString(DataTuple) - Method in class si.ijs.kt.clus.statistic.ClusStatistic
 
getPrefix() - Method in class si.ijs.kt.clus.error.common.ClusError
 
getPrefix() - Method in class si.ijs.kt.clus.error.common.ClusErrorList
 
getPrepareTime() - Method in class si.ijs.kt.clus.main.ClusModelInfoList
 
getPreprocs(boolean) - Method in class si.ijs.kt.clus.Clus
 
getPreprocs(DataPreprocs) - Method in class si.ijs.kt.clus.algo.ClusInductionAlgorithm
 
getPreprocs(DataPreprocs) - Method in class si.ijs.kt.clus.ext.semisupervised.ClusSelfTrainingFTFInduce
 
getPreprocs(DataPreprocs) - Method in class si.ijs.kt.clus.ext.semisupervised.ClusSelfTrainingInduce
 
getPreprocs(DataPreprocs) - Method in class si.ijs.kt.clus.main.ClusStatManager
 
getPreprocs(DataPreprocs, boolean) - Method in class si.ijs.kt.clus.data.ClusSchema
 
getPreprocs(DataPreprocs, boolean) - Method in class si.ijs.kt.clus.data.type.ClusAttrType
 
getPreprocs(DataPreprocs, boolean) - Method in class si.ijs.kt.clus.data.type.hierarchies.ClassesAttrType
 
getPrevIndex() - Method in class si.ijs.kt.clus.statistic.ClassificationStat
 
getPrevIndex() - Method in class si.ijs.kt.clus.statistic.RegressionStat
 
getPrevIndex() - Method in class si.ijs.kt.clus.statistic.WHTDStatistic
 
getProbabilityPrediction() - Method in class si.ijs.kt.clus.statistic.ClassificationStat
 
getProbabilityPrediction(int) - Method in class si.ijs.kt.clus.statistic.ClassificationStat
Probability prediction for i^th target
getProportion(int) - Method in class si.ijs.kt.clus.model.test.NodeTest
 
getProportion(int, int) - Method in class si.ijs.kt.clus.statistic.ClassificationStat
 
getProportions() - Method in class si.ijs.kt.clus.model.test.NodeTest
Proportion of examples in different branches
getPrototype() - Method in class si.ijs.kt.clus.util.jeans.io.ini.INIFileSectionGroup
 
getPrototype(int) - Method in class si.ijs.kt.clus.algo.kNN.KNNStatistics
Deprecated.
Returns the idx'th prototype (meaning: of the idx'th value of the target attribute ) require idx < amount of possible target values
getPrototypes() - Method in class si.ijs.kt.clus.algo.kNN.KNNStatistics
Deprecated.
 
getProximities() - Method in class si.ijs.kt.clus.ext.ensemble.ClusForest
 
getPrunedModelInfo(int, ClusNode) - Method in class si.ijs.kt.clus.pruning.PruneTree
 
getPrunedName(int) - Method in class si.ijs.kt.clus.ext.hierarchical.HierClassTresholdPruner
 
getPrunedName(int) - Method in class si.ijs.kt.clus.pruning.PruneTree
 
getPrunedName(int) - Method in class si.ijs.kt.clus.pruning.SizeConstraintPruning
 
getPruneFile() - Method in class si.ijs.kt.clus.main.settings.section.SettingsData
 
getPruneIter() - Method in class si.ijs.kt.clus.main.ClusRun
 
getPruneProportion() - Method in class si.ijs.kt.clus.main.settings.section.SettingsData
 
getPruneSelection() - Method in class si.ijs.kt.clus.main.ClusRun
 
getPruneSet() - Method in class si.ijs.kt.clus.main.ClusRun
Pruning set
getPruneSetMax() - Method in class si.ijs.kt.clus.main.settings.section.SettingsData
 
getPruneTime() - Method in class si.ijs.kt.clus.main.ClusModelInfoList
 
getPruningMethod() - Method in class si.ijs.kt.clus.main.settings.section.SettingsTree
 
getPruningMethodName() - Method in class si.ijs.kt.clus.main.settings.section.SettingsTree
 
getPythonModelType() - Method in class si.ijs.kt.clus.main.settings.section.SettingsOutput
 
getPythonString(String) - Method in class si.ijs.kt.clus.ext.optxval.SoftNumericTest
 
getPythonString(String) - Method in class si.ijs.kt.clus.model.test.ClusRuleConstraintInduceTest
 
getPythonString(String) - Method in class si.ijs.kt.clus.model.test.FakeTest
 
getPythonString(String) - Method in class si.ijs.kt.clus.model.test.NodeTest
 
getPythonString(String) - Method in class si.ijs.kt.clus.model.test.NominalTest
 
getPythonString(String) - Method in class si.ijs.kt.clus.model.test.NumericTest
 
getPythonString(String) - Method in class si.ijs.kt.clus.model.test.SubsetTest
 
getPythonTestString(String) - Method in class si.ijs.kt.clus.model.test.NodeTest
 
getQuotient(int, int) - Method in class si.ijs.kt.clus.main.ClusOutput
 
getRandIndex() - Method in class si.ijs.kt.clus.ext.ilevelc.ILevelCRandIndex
 
getRandom(int) - Static method in class si.ijs.kt.clus.util.ClusRandom
 
getRandom(int) - Method in class si.ijs.kt.clus.util.ClusRandomNonstatic
 
getRandomSeed() - Method in class si.ijs.kt.clus.main.settings.section.SettingsGeneral
 
getRandomSubspaces() - Static method in class si.ijs.kt.clus.ext.ensemble.ClusEnsembleInduce
 
getRandValueInRange(Random, int) - Method in class si.ijs.kt.clus.util.tools.optimization.de.DEProblem
Single random value within the range of variables.
getRandVector(Random) - Method in class si.ijs.kt.clus.util.tools.optimization.de.DEProblem
Generates a random solution.
getRange() - Method in class si.ijs.kt.clus.util.jeans.math.SingleStat
 
getRange(ArrayList<SingleStatList>) - Method in class si.ijs.kt.clus.algo.tdidt.tune.CDTuneSizeConstrPruning
 
getRankCorrVariance() - Method in class si.ijs.kt.clus.error.SpearmanRankCorrelationPerExample
Gives the variance of the arithmetic mean of the rank correlation over all examples
getRankingMethodName() - Method in class si.ijs.kt.clus.main.settings.section.SettingsEnsemble
 
getRankingMethods() - Method in class si.ijs.kt.clus.main.settings.section.SettingsEnsemble
 
getRankings() - Method in class si.ijs.kt.clus.ext.featureRanking.ensemble.ClusEnsembleFeatureRankings
 
getRanks(double[]) - Static method in class si.ijs.kt.clus.util.ClusUtil
Computes the rank of each value in the given array
getReader() - Method in class si.ijs.kt.clus.util.jeans.util.MStreamTokenizer
 
getRecall() - Method in class si.ijs.kt.clus.error.hmlc.HierClassWiseAccuracy
 
getRecall() - Method in class si.ijs.kt.clus.error.hmlc.HierLevelAccuracy
 
getRecallValues() - Method in class si.ijs.kt.clus.main.settings.section.SettingsHMLC
 
getRecursive() - Method in class si.ijs.kt.clus.main.settings.section.SettingsSIT
 
getReduceMemoryNominalAttrs() - Method in class si.ijs.kt.clus.main.settings.section.SettingsAttribute
 
getRefinement() - Method in class si.ijs.kt.clus.ext.beamsearch.ClusBeamModel
 
getRegressionStat() - Method in class si.ijs.kt.clus.statistic.ClusStatistic
 
getRegressionStat() - Method in class si.ijs.kt.clus.statistic.CombStat
 
getRegressionStat() - Method in class si.ijs.kt.clus.statistic.RegressionStat
 
getRelationName() - Method in class si.ijs.kt.clus.data.ClusSchema
 
getRelativeError(ArrayList<RowData[]>, int) - Static method in class si.ijs.kt.clus.addon.sit.Evaluator
 
getRelativeError(RowData[], int) - Static method in class si.ijs.kt.clus.addon.sit.Evaluator
 
getRelief() - Method in class si.ijs.kt.clus.main.settings.Settings
 
getReliefNbIterationsValue(int) - Method in class si.ijs.kt.clus.main.settings.section.SettingsRelief
Returns a list, containing the numbers of the iterations.
getReliefNbNeighboursValue() - Method in class si.ijs.kt.clus.main.settings.section.SettingsRelief
 
getReliefStatisticsType() - Method in class si.ijs.kt.clus.main.settings.section.SettingsRelief
 
getReliefWeightingSigma() - Method in class si.ijs.kt.clus.main.settings.section.SettingsRelief
 
getReliefWeightNeighbours() - Method in class si.ijs.kt.clus.main.settings.section.SettingsRelief
 
getRepresentativeMean() - Method in class si.ijs.kt.clus.ext.structuredTypes.SetStatistic
 
getRepresentativeMean() - Method in class si.ijs.kt.clus.ext.structuredTypes.TupleStatistic
 
getRepresentativeMean() - Method in class si.ijs.kt.clus.ext.timeseries.TimeSeriesStat
 
getRepresentativeMedoid() - Method in class si.ijs.kt.clus.ext.structuredTypes.SetStatistic
 
getRepresentativeMedoid() - Method in class si.ijs.kt.clus.ext.structuredTypes.TupleStatistic
 
getRepresentativeMedoid() - Method in class si.ijs.kt.clus.ext.timeseries.TimeSeriesStat
 
getResourceInfoLoaded() - Method in class si.ijs.kt.clus.main.settings.section.SettingsGeneral
 
getResourceInfoLoadedValue() - Method in class si.ijs.kt.clus.main.settings.section.SettingsGeneral
 
getResult(TargetSet, RowData) - Method in class si.ijs.kt.clus.addon.sit.mtLearner.ResultsCache
 
getRight() - Method in class si.ijs.kt.clus.util.jeans.tree.BinaryNode
 
getRightSubtree() - Method in class si.ijs.kt.clus.algo.kNN.methods.vpTree.VPNode
 
getRMSE(ClusAttributeWeights) - Method in class si.ijs.kt.clus.statistic.RegressionStatBase
 
getRMSE(RowData[], int) - Static method in class si.ijs.kt.clus.addon.sit.Evaluator
 
getROCCurve() - Method in class si.ijs.kt.clus.error.ROCAndPRCurve
 
getRoot() - Method in class si.ijs.kt.clus.ext.hierarchical.ClassHierarchy
 
getRoot() - Method in class si.ijs.kt.clus.ext.optiontree.MyNode
 
getRoot() - Method in class si.ijs.kt.clus.util.jeans.tree.MyNode
 
getRootIter() - Method in class si.ijs.kt.clus.ext.hierarchical.ClassHierarchy
 
getRootNode(ClusRun) - Method in class si.ijs.kt.clus.ext.exhaustivesearch.ClusExhaustiveDFSearch
 
getRootScaledVariance(int, ClusAttributeWeights) - Method in class si.ijs.kt.clus.statistic.RegressionStatBase
 
getRootScaledVariances(ClusAttributeWeights) - Method in class si.ijs.kt.clus.statistic.RegressionStatBase
 
getROSAddRulesWithTotalAveraging() - Method in class si.ijs.kt.clus.main.settings.section.SettingsRules
 
getROSAlgorithmType() - Method in class si.ijs.kt.clus.ext.ensemble.ros.ClusROSForestInfo
 
getROSModelInfo() - Method in class si.ijs.kt.clus.algo.rules.ClusRule
 
getROSModelInfo() - Method in class si.ijs.kt.clus.algo.tdidt.ClusNode
 
getROSModelInfo() - Method in class si.ijs.kt.clus.data.attweights.ClusAttributeWeights
 
getROSModelInfo(int) - Method in class si.ijs.kt.clus.ext.ensemble.ros.ClusROSForestInfo
 
getROSVotingType() - Method in class si.ijs.kt.clus.ext.ensemble.ros.ClusROSForestInfo
 
getRoundVector(ArrayList<Double>) - Method in class si.ijs.kt.clus.util.tools.optimization.de.DEProblem
 
getRow() - Method in class si.ijs.kt.clus.data.io.ClusReader
 
getRow(int) - Method in class si.ijs.kt.clus.util.jeans.math.matrix.MSymMatrix
 
getRowDataClone() - Method in class si.ijs.kt.clus.Clus
 
getRows() - Method in class si.ijs.kt.clus.util.jeans.math.matrix.MMatrix
 
getRows() - Method in class si.ijs.kt.clus.util.jeans.math.matrix.MSymMatrix
 
getRule(int) - Method in class si.ijs.kt.clus.algo.rules.ClusRuleSet
 
getRuleAddingMethod() - Method in class si.ijs.kt.clus.main.settings.section.SettingsRules
 
getRuleCovers(int) - Method in class si.ijs.kt.clus.util.tools.optimization.OptimizationProblem
Returns boolean array of rule covering
getRuleInduceParamsDisabled() - Method in class si.ijs.kt.clus.main.settings.section.SettingsRules
 
getRuleNbSigAtt() - Method in class si.ijs.kt.clus.main.settings.section.SettingsRules
 
getRuleNextCovered(int, int) - Method in class si.ijs.kt.clus.util.tools.optimization.OptimizationProblem
Returns the index of next covered instance for the rule
getRulePredictionMethod() - Method in class si.ijs.kt.clus.main.settings.section.SettingsRules
 
getRules() - Method in class si.ijs.kt.clus.algo.rules.ClusRuleSet
 
getRules() - Method in class si.ijs.kt.clus.main.settings.Settings
 
getRuleSetTests() - Method in class si.ijs.kt.clus.algo.rules.ClusRuleSet
Get a set of all test nodes in a rule set
getRuleSignificanceLevel() - Method in class si.ijs.kt.clus.main.settings.section.SettingsRules
 
getRun() - Method in class si.ijs.kt.clus.algo.kNN.methods.kdTree.KDTree
 
getRun() - Method in class si.ijs.kt.clus.algo.kNN.methods.SearchAlgorithm
 
getSaveNeighboursFile() - Method in class si.ijs.kt.clus.main.settings.section.SettingsKNN
 
getScaledSS(int, ClusAttributeWeights) - Method in class si.ijs.kt.clus.statistic.RegressionStatBase
 
getScaledVariance(int, ClusAttributeWeights) - Method in class si.ijs.kt.clus.statistic.RegressionStatBase
 
getSchema() - Method in class si.ijs.kt.clus.addon.ILevelC.ilevelc.ILevelCGUI
 
getSchema() - Method in class si.ijs.kt.clus.algo.ClusInductionAlgorithm
 
getSchema() - Method in class si.ijs.kt.clus.algo.split.FindBestTest
 
getSchema() - Method in class si.ijs.kt.clus.Clus
 
getSchema() - Method in class si.ijs.kt.clus.data.rows.DataTuple
 
getSchema() - Method in class si.ijs.kt.clus.data.rows.FileTupleIterator
 
getSchema() - Method in class si.ijs.kt.clus.data.rows.MemoryTupleIterator
 
getSchema() - Method in class si.ijs.kt.clus.data.rows.RowData
 
getSchema() - Method in class si.ijs.kt.clus.data.rows.TupleIterator
 
getSchema() - Method in class si.ijs.kt.clus.data.type.ClusAttrType
 
getSchema() - Method in class si.ijs.kt.clus.ext.optiontree.FindBestTests
 
getSchema() - Method in class si.ijs.kt.clus.ext.semisupervised.ClusSelfTrainingFTFInduce
 
getSchema() - Method in class si.ijs.kt.clus.ext.semisupervised.ClusSelfTrainingInduce
 
getSchema() - Method in class si.ijs.kt.clus.main.ClusStatManager
 
getSchema() - Method in class si.ijs.kt.clus.model.ClusModelInfo
 
getScore() - Method in class si.ijs.kt.clus.Clus
 
getScore() - Method in class si.ijs.kt.clus.model.ClusModelInfo
 
getSearch() - Method in class si.ijs.kt.clus.algo.kNN.KnnModel
 
getSearchMethod() - Method in class si.ijs.kt.clus.main.settings.section.SettingsKNN
 
getSearchName() - Method in class si.ijs.kt.clus.main.settings.section.SettingsSIT
 
getSecond() - Method in class si.ijs.kt.clus.ext.semisupervised.utils.DoublesPair
 
getSecond() - Method in class si.ijs.kt.clus.util.tuple.Pair
 
getSecond() - Method in class si.ijs.kt.clus.util.tuple.Quadruple
 
getSecond() - Method in class si.ijs.kt.clus.util.tuple.Triple
 
getSection() - Method in class si.ijs.kt.clus.main.settings.SettingsBase
Returns INI section
getSectionAt(int) - Method in class si.ijs.kt.clus.util.jeans.io.ini.INIFileSectionGroup
 
getSectionMultiLabel() - Method in class si.ijs.kt.clus.main.settings.section.SettingsMLC
 
getSectionsIterator() - Method in class si.ijs.kt.clus.main.settings.Settings
 
getSeed() - Method in class si.ijs.kt.clus.util.ClusRandomNonstatic
 
getSelector(int) - Method in class si.ijs.kt.clus.ext.optxval.OptXValInduce
 
getSemiSupervisedMethod() - Method in class si.ijs.kt.clus.main.settings.section.SettingsSSL
 
getSequencePruner() - Method in class si.ijs.kt.clus.pruning.SequencePruningVSB
 
getSet(DataTuple) - Method in class si.ijs.kt.clus.data.type.complex.SetAttrType
 
getSetDistance() - Method in class si.ijs.kt.clus.main.settings.section.SettingsTree
 
getSetPred() - Method in class si.ijs.kt.clus.ext.structuredTypes.SetStatistic
 
getSettings() - Method in class si.ijs.kt.clus.addon.hmc.HMCAverageSingleClass.HMCAverageNodeWiseModels
 
getSettings() - Method in class si.ijs.kt.clus.addon.hmc.HMCAverageSingleClass.HMCAverageSingleClass
 
getSettings() - Method in class si.ijs.kt.clus.addon.sit.Sit
Returns the current settings object
getSettings() - Method in class si.ijs.kt.clus.algo.ClusInductionAlgorithm
Returns the settings given in the settings file (.s).
getSettings() - Method in class si.ijs.kt.clus.algo.ClusInductionAlgorithmType
 
getSettings() - Method in class si.ijs.kt.clus.algo.kNN.distance.valentin.BasicDistance
 
getSettings() - Method in class si.ijs.kt.clus.algo.rules.ClusRule
 
getSettings() - Method in class si.ijs.kt.clus.algo.rules.ClusRuleSet
 
getSettings() - Method in class si.ijs.kt.clus.algo.split.FindBestTest
 
getSettings() - Method in class si.ijs.kt.clus.Clus
 
getSettings() - Method in class si.ijs.kt.clus.data.ClusSchema
 
getSettings() - Method in class si.ijs.kt.clus.data.type.ClusAttrType
 
getSettings() - Method in class si.ijs.kt.clus.ext.beamsearch.ClusBeamSearch
 
getSettings() - Method in class si.ijs.kt.clus.ext.ensemble.ClusEnsembleInduceOptimization
 
getSettings() - Method in class si.ijs.kt.clus.ext.exhaustivesearch.ClusExhaustiveSearch
 
getSettings() - Method in class si.ijs.kt.clus.ext.featureRanking.ClusFeatureRanking
 
getSettings() - Method in class si.ijs.kt.clus.ext.featureRanking.ensemble.ClusEnsembleFeatureRankings
 
getSettings() - Method in class si.ijs.kt.clus.ext.hierarchical.ClassHierarchy
 
getSettings() - Method in class si.ijs.kt.clus.ext.optiontree.FindBestTests
 
getSettings() - Method in class si.ijs.kt.clus.ext.semisupervised.ClusSelfTrainingFTFInduce
Returns the settings given in the settings file (.s).
getSettings() - Method in class si.ijs.kt.clus.ext.semisupervised.ClusSelfTrainingInduce
Returns the settings given in the settings file (.s).
getSettings() - Method in class si.ijs.kt.clus.heuristic.ClusHeuristic
 
getSettings() - Method in class si.ijs.kt.clus.main.ClusOutput
 
getSettings() - Method in class si.ijs.kt.clus.main.ClusStatManager
 
getSettings() - Method in class si.ijs.kt.clus.model.ClusModelInfo
 
getSettings() - Method in class si.ijs.kt.clus.statistic.ClusStatistic
 
getSettings() - Method in class si.ijs.kt.clus.util.tools.optimization.de.DEPopulation
 
getSettings() - Method in class si.ijs.kt.clus.util.tools.optimization.OptimizationAlgorithm
 
getSettings() - Method in class si.ijs.kt.clus.util.tools.optimization.OptimizationProblem
 
getSettingSig() - Static method in class si.ijs.kt.clus.util.FTest
 
getSetWeight() - Method in class si.ijs.kt.clus.ext.structuredTypes.Set
 
getShowModel(SettingsOutput.ShowModels) - Method in class si.ijs.kt.clus.main.settings.section.SettingsOutput
 
getSigma() - Method in class si.ijs.kt.clus.ext.featureRanking.relief.ReliefModel
 
getSimpleString() - Method in class si.ijs.kt.clus.statistic.ClassificationStat
 
getSimpleString() - Method in class si.ijs.kt.clus.statistic.ClusStatistic
 
getSingle() - Method in class si.ijs.kt.clus.util.jeans.io.ini.INIFileNominal
 
getSingleRun() - Method in class si.ijs.kt.clus.ext.ensemble.container.OneBagResults
 
getSIT() - Method in class si.ijs.kt.clus.main.settings.Settings
 
getSize() - Method in class si.ijs.kt.clus.util.jeans.io.ini.INIFileArray
 
getSize() - Method in class si.ijs.kt.clus.util.jeans.io.ini.INIFileNominal
 
getSize() - Method in class si.ijs.kt.clus.util.jeans.math.matrix.MSymMatrix
 
getSize() - Method in class si.ijs.kt.clus.util.jeans.util.IntegerStack
 
getSizeConstraintPruning(int) - Method in class si.ijs.kt.clus.main.settings.section.SettingsConstraints
 
getSizeConstraintPruningNumber() - Method in class si.ijs.kt.clus.main.settings.section.SettingsConstraints
 
getSizeConstraintPruningVector() - Method in class si.ijs.kt.clus.main.settings.section.SettingsConstraints
 
getSizeOfSubspace() - Method in class si.ijs.kt.clus.ext.ensemble.ros.ClusROSModelInfo
 
getSizePenalty() - Method in class si.ijs.kt.clus.main.settings.section.SettingsBeamSearch
 
getSmartTargetStat() - Method in class si.ijs.kt.clus.algo.tdidt.ClusNode
 
getSortHelper() - Method in class si.ijs.kt.clus.algo.split.FindBestTest
 
getSortHelper() - Method in class si.ijs.kt.clus.ext.optiontree.FindBestTests
 
getSpacesUnk() - Method in class si.ijs.kt.clus.algo.tdidt.ClusNode
 
getSpacesYes() - Method in class si.ijs.kt.clus.algo.tdidt.ClusNode
 
getSpatialAlpha() - Method in class si.ijs.kt.clus.main.settings.section.SettingsTree
 
getSpatialMatrix() - Method in class si.ijs.kt.clus.main.settings.section.SettingsTree
 
getSpatialMeasure() - Method in class si.ijs.kt.clus.main.settings.section.SettingsTree
 
getSpearmanRankCorrelation(double[], double[]) - Method in class si.ijs.kt.clus.error.SpearmanRankCorrelationPerExample
 
getSplitIndex() - Method in class si.ijs.kt.clus.statistic.ClassificationStat
 
getSplitIndex() - Method in class si.ijs.kt.clus.statistic.RegressionStat
 
getSplitIndex() - Method in class si.ijs.kt.clus.statistic.WHTDStatistic
 
getSplitPosition() - Method in class si.ijs.kt.clus.main.settings.section.SettingsTree
 
getSplitValue() - Method in class si.ijs.kt.clus.ext.optiontree.TestAndHeuristic
 
getSquaredDistance(DataTuple, ClusAttributeWeights) - Method in class si.ijs.kt.clus.statistic.ClusStatistic
 
getSquaredDistance(DataTuple, ClusAttributeWeights) - Method in class si.ijs.kt.clus.statistic.RegressionStatBase
 
getSquaredDistance(DataTuple, ClusAttributeWeights) - Method in class si.ijs.kt.clus.statistic.WHTDStatistic
Compute squared Euclidean distance between tuple's target attributes and this statistic's mean.
getSquaredDistance(ClusStatistic) - Method in class si.ijs.kt.clus.statistic.ClassificationStat
 
getSquaredDistance(ClusStatistic) - Method in class si.ijs.kt.clus.statistic.ClusStatistic
 
getSquaredDistance(ClusStatistic) - Method in class si.ijs.kt.clus.statistic.RegressionStat
 
getSquaredDistanceH(DataTuple, double[]) - Method in class si.ijs.kt.clus.statistic.WHTDStatistic
 
getSSL() - Method in class si.ijs.kt.clus.main.settings.Settings
 
getSSLAggregation() - Method in class si.ijs.kt.clus.main.settings.section.SettingsSSL
 
getSSLInternalFold() - Method in class si.ijs.kt.clus.main.settings.section.SettingsSSL
 
getSSLInternalFolds() - Method in class si.ijs.kt.clus.main.settings.section.SettingsSSL
 
getSSLNormalization() - Method in class si.ijs.kt.clus.main.settings.section.SettingsSSL
 
getSSLPossibleWeights() - Method in class si.ijs.kt.clus.main.settings.section.SettingsSSL
 
getSSLPruningWhenTuning() - Method in class si.ijs.kt.clus.main.settings.section.SettingsSSL
 
getSSLWeightScoresFile() - Method in class si.ijs.kt.clus.main.settings.section.SettingsSSL
 
getStack() - Method in class si.ijs.kt.clus.algo.kNN.methods.kdTree.KDTree
 
getStandardDeviation(int) - Method in class si.ijs.kt.clus.statistic.RegressionStatBase
 
getStartItemCpt() - Method in class si.ijs.kt.clus.main.settings.section.SettingsExhaustiveSearch
 
getStartTreeCpt() - Method in class si.ijs.kt.clus.main.settings.section.SettingsExhaustiveSearch
 
getStat() - Method in class si.ijs.kt.clus.ext.ensemble.ClusForest
 
getStat(int) - Method in class si.ijs.kt.clus.algo.split.CurrentBestTestAndHeuristic
 
getStat(int) - Method in class si.ijs.kt.clus.ext.optiontree.TestAndHeuristic
 
getStatistic() - Method in class si.ijs.kt.clus.data.type.primitive.NominalAttrType
 
getStatistic() - Method in class si.ijs.kt.clus.data.type.primitive.NumericAttrType
 
getStatistic(ClusAttrType.AttributeUseType) - Method in class si.ijs.kt.clus.main.ClusStatManager
 
getStatisticPrintInfo() - Method in class si.ijs.kt.clus.main.settings.section.SettingsOutput
 
getStatManager() - Method in class si.ijs.kt.clus.addon.hmc.HMCAverageSingleClass.HMCAverageNodeWiseModels
 
getStatManager() - Method in class si.ijs.kt.clus.addon.hmc.HMCAverageSingleClass.HMCAverageSingleClass
 
getStatManager() - Method in class si.ijs.kt.clus.algo.ClusInductionAlgorithm
 
getStatManager() - Method in class si.ijs.kt.clus.algo.ClusInductionAlgorithmType
 
getStatManager() - Method in class si.ijs.kt.clus.algo.split.FindBestTest
 
getStatManager() - Method in class si.ijs.kt.clus.algo.split.SubsetSplit
 
getStatManager() - Method in class si.ijs.kt.clus.Clus
 
getStatManager() - Method in class si.ijs.kt.clus.ext.ilevelc.COPKMeans
 
getStatManager() - Method in class si.ijs.kt.clus.ext.ilevelc.COPKMeansCluster
 
getStatManager() - Method in class si.ijs.kt.clus.ext.ilevelc.MPCKMeansWrapper
 
getStatManager() - Method in class si.ijs.kt.clus.ext.optiontree.FindBestTests
 
getStatManager() - Method in class si.ijs.kt.clus.ext.semisupervised.ClusSelfTrainingFTFInduce
 
getStatManager() - Method in class si.ijs.kt.clus.ext.semisupervised.ClusSelfTrainingInduce
 
getStatManager() - Method in class si.ijs.kt.clus.main.ClusModelInfoList
 
getStatManager() - Method in class si.ijs.kt.clus.main.ClusRun
 
getStatManager() - Method in class si.ijs.kt.clus.main.ClusSummary
 
getStatManager() - Method in class si.ijs.kt.clus.model.ClusModelInfo
 
getStatus() - Method in class si.ijs.kt.clus.data.type.ClusAttrType
 
getStdDefOfMean() - Method in class si.ijs.kt.clus.util.jeans.math.SingleStat
 
getStdDev() - Method in class si.ijs.kt.clus.util.jeans.math.SingleStat
 
getStdDev(double[]) - Static method in class si.ijs.kt.clus.ext.semisupervised.Helper
corrected sample standard deviation
getStoppingCriteria() - Method in class si.ijs.kt.clus.main.settings.section.SettingsSSL
 
getString() - Method in class si.ijs.kt.clus.ext.optxval.SoftNumericTest
 
getString() - Method in class si.ijs.kt.clus.main.ClusOutput
 
getString() - Method in class si.ijs.kt.clus.model.test.ClusRuleConstraintInduceTest
 
getString() - Method in class si.ijs.kt.clus.model.test.FakeTest
 
getString() - Method in class si.ijs.kt.clus.model.test.InverseNumericTest
 
getString() - Method in class si.ijs.kt.clus.model.test.NodeTest
String methods
getString() - Method in class si.ijs.kt.clus.model.test.NominalTest
 
getString() - Method in class si.ijs.kt.clus.model.test.NumericTest
 
getString() - Method in class si.ijs.kt.clus.model.test.SubsetTest
 
getString() - Method in class si.ijs.kt.clus.statistic.ClusStatistic
 
getString(String, Object) - Method in class si.ijs.kt.clus.util.jeans.io.range.DoubleRangeCheck
 
getString(String, Object) - Method in class si.ijs.kt.clus.util.jeans.io.range.IntRangeCheck
 
getString(String, Object) - Method in interface si.ijs.kt.clus.util.jeans.io.range.ValueCheck
 
getString(DataTuple) - Method in class si.ijs.kt.clus.data.type.ClusAttrType
 
getString(DataTuple) - Method in class si.ijs.kt.clus.data.type.complex.SetAttrType
 
getString(DataTuple) - Method in class si.ijs.kt.clus.data.type.complex.SetAttrType.MySerializable
 
getString(DataTuple) - Method in class si.ijs.kt.clus.data.type.complex.TupleAttrType
 
getString(DataTuple) - Method in class si.ijs.kt.clus.data.type.complex.TupleAttrType.MySerializable
 
getString(DataTuple) - Method in class si.ijs.kt.clus.data.type.hierarchies.ClassesAttrType
 
getString(DataTuple) - Method in class si.ijs.kt.clus.data.type.primitive.IntegerAttrType
 
getString(DataTuple) - Method in class si.ijs.kt.clus.data.type.primitive.NominalAttrType
 
getString(DataTuple) - Method in class si.ijs.kt.clus.data.type.primitive.NumericAttrType
 
getString(DataTuple) - Method in class si.ijs.kt.clus.data.type.primitive.StringAttrType
 
getString(DataTuple) - Method in class si.ijs.kt.clus.data.type.primitive.TimeSeriesAttrType
 
getString(DataTuple) - Method in class si.ijs.kt.clus.data.type.primitive.TimeSeriesAttrType.MySerializable
 
getString(StatisticPrintInfo) - Method in class si.ijs.kt.clus.error.common.multiscore.MultiScoreStat
 
getString(StatisticPrintInfo) - Method in class si.ijs.kt.clus.ext.beamsearch.ClusBeamSimRegrStat
 
getString(StatisticPrintInfo) - Method in class si.ijs.kt.clus.ext.ilevelc.ILevelCStatistic
 
getString(StatisticPrintInfo) - Method in class si.ijs.kt.clus.ext.structuredTypes.SetStatistic
 
getString(StatisticPrintInfo) - Method in class si.ijs.kt.clus.ext.structuredTypes.TupleStatistic
 
getString(StatisticPrintInfo) - Method in class si.ijs.kt.clus.ext.timeseries.TimeSeriesStat
 
getString(StatisticPrintInfo) - Method in class si.ijs.kt.clus.statistic.BitVectorStat
 
getString(StatisticPrintInfo) - Method in class si.ijs.kt.clus.statistic.ClassificationStat
Prints the statistics - predictions : weighted sum of all examples
getString(StatisticPrintInfo) - Method in class si.ijs.kt.clus.statistic.ClusStatistic
 
getString(StatisticPrintInfo) - Method in class si.ijs.kt.clus.statistic.CombStat
 
getString(StatisticPrintInfo) - Method in class si.ijs.kt.clus.statistic.CombStatClassRegHier
 
getString(StatisticPrintInfo) - Method in class si.ijs.kt.clus.statistic.GeneticDistanceStat
 
getString(StatisticPrintInfo) - Method in class si.ijs.kt.clus.statistic.RegressionStat
 
getString(StatisticPrintInfo) - Method in class si.ijs.kt.clus.statistic.RegressionStatBinaryNomiss
 
getString(StatisticPrintInfo) - Method in class si.ijs.kt.clus.statistic.WHTDStatistic
 
getString2() - Method in class si.ijs.kt.clus.statistic.ClassificationStat
 
getString2() - Method in class si.ijs.kt.clus.statistic.ClusStatistic
 
getStringAt(int) - Method in class si.ijs.kt.clus.util.jeans.io.ini.INIFileArray
 
getStringAt(int) - Method in class si.ijs.kt.clus.util.jeans.io.ini.INIFileNominal
 
getStringSingle() - Method in class si.ijs.kt.clus.util.jeans.io.ini.INIFileNominal
 
getStringTable() - Method in class si.ijs.kt.clus.ext.hierarchical.ClassHierarchyIO
 
getStringValue() - Method in class si.ijs.kt.clus.util.jeans.io.ini.INIFileArray
 
getStringValue() - Method in class si.ijs.kt.clus.util.jeans.io.ini.INIFileBool
 
getStringValue() - Method in class si.ijs.kt.clus.util.jeans.io.ini.INIFileDouble
 
getStringValue() - Method in class si.ijs.kt.clus.util.jeans.io.ini.INIFileEntry
 
getStringValue() - Method in class si.ijs.kt.clus.util.jeans.io.ini.INIFileEnum
 
getStringValue() - Method in class si.ijs.kt.clus.util.jeans.io.ini.INIFileEnumList
 
getStringValue() - Method in class si.ijs.kt.clus.util.jeans.io.ini.INIFileInt
 
getStringValue() - Method in class si.ijs.kt.clus.util.jeans.io.ini.INIFileNominal
 
getStringValue() - Method in class si.ijs.kt.clus.util.jeans.io.ini.INIFileNominalOrDoubleOrVector
 
getStringValue() - Method in class si.ijs.kt.clus.util.jeans.io.ini.INIFileNominalOrIntOrVector
 
getStringValue() - Method in class si.ijs.kt.clus.util.jeans.io.ini.INIFileString
 
getStringValue() - Method in class si.ijs.kt.clus.util.jeans.io.ini.INIFileStringOrDouble
 
getStringValue() - Method in class si.ijs.kt.clus.util.jeans.io.ini.INIFileStringOrInt
 
getStringWithPrefix(String) - Method in class si.ijs.kt.clus.ext.optxval.SoftNumericTest
 
getStringWithPrefix(String) - Method in class si.ijs.kt.clus.model.test.NumericTest
 
getSubmodelName(int) - Static method in class si.ijs.kt.clus.algo.tdidt.ClusNode
 
getSubsetConstraints(RowData) - Method in class si.ijs.kt.clus.ext.ilevelc.ILevelCInduce
 
getSubspaceString() - Method in class si.ijs.kt.clus.ext.ensemble.ros.ClusROSModelInfo
 
getSumLeftLeavesError(ClusNode, MDouble) - Static method in class si.ijs.kt.clus.ext.exhaustivesearch.ClusExhaustiveDFSearch
 
getSummary() - Method in class si.ijs.kt.clus.Clus
 
getSummary() - Method in class si.ijs.kt.clus.data.rows.RowData
 
getSummary() - Method in class si.ijs.kt.clus.main.ClusRun
Getting to the summary
getSummary(String) - Method in class si.ijs.kt.clus.data.rows.RowData
 
getSummaryClone() - Method in class si.ijs.kt.clus.main.ClusSummary
 
getSummaryError() - Method in class si.ijs.kt.clus.error.AbsoluteError
 
getSummaryJSON() - Method in class si.ijs.kt.clus.data.rows.RowData
 
getSumNbPosActual() - Method in class si.ijs.kt.clus.error.hmlc.HierClassWiseAccuracy
 
getSumNbPosPredicted() - Method in class si.ijs.kt.clus.error.hmlc.HierClassWiseAccuracy
 
getSumOfEntropyWithin(int[]) - Method in class si.ijs.kt.clus.heuristic.GeneticDistanceHeuristicMatrix
 
getSumPrediction(int) - Method in class si.ijs.kt.clus.ext.beamsearch.ClusBeamSimClassStat
 
getSumPrediction(int, int) - Method in class si.ijs.kt.clus.ext.beamsearch.ClusBeamSimClassStat
 
getSumPredictions() - Method in class si.ijs.kt.clus.ext.beamsearch.ClusBeamSimRegrStat
 
getSumPredictions(int) - Method in class si.ijs.kt.clus.ext.beamsearch.ClusBeamSimRegrStat
 
getSumPWDistanceBetween(int[], int[]) - Method in class si.ijs.kt.clus.heuristic.GeneticDistanceHeuristicMatrix
 
getSumPWDistancesWithin(int[]) - Method in class si.ijs.kt.clus.heuristic.GeneticDistanceHeuristicMatrix
 
getSumSqPrediction(int) - Method in class si.ijs.kt.clus.ext.beamsearch.ClusBeamSimClassStat
 
getSumSqPrediction(int, int) - Method in class si.ijs.kt.clus.ext.beamsearch.ClusBeamSimClassStat
 
getSumSqPredictions() - Method in class si.ijs.kt.clus.ext.beamsearch.ClusBeamSimRegrStat
 
getSumSqPredictions(int) - Method in class si.ijs.kt.clus.ext.beamsearch.ClusBeamSimRegrStat
 
getSumSqValues(int) - Method in class si.ijs.kt.clus.statistic.RegressionStat
 
getSumValues() - Method in class si.ijs.kt.clus.statistic.RegressionStatBinaryNomiss
 
getSumValues(int) - Method in class si.ijs.kt.clus.statistic.RegressionStat
 
getSumWeight() - Method in class si.ijs.kt.clus.statistic.ClusStatistic
 
getSumWeight(int) - Method in class si.ijs.kt.clus.statistic.ClassificationStat
 
getSumWeights() - Method in class si.ijs.kt.clus.data.rows.RowData
 
getSumWeights(int) - Method in class si.ijs.kt.clus.statistic.ClassificationStat
 
getSumWeights(int) - Method in class si.ijs.kt.clus.statistic.RegressionStat
 
getSupport(DataTuple) - Method in class si.ijs.kt.clus.algo.rules.ClusRuleSet
TODO: Calculates Support for a DataTuple
getSVarS(double, double, double, double) - Method in class si.ijs.kt.clus.statistic.RegressionStat
 
getSVarS(int) - Method in class si.ijs.kt.clus.ext.beamsearch.ClusBeamSimRegrStat
 
getSVarS(int) - Method in class si.ijs.kt.clus.statistic.ClassificationStat
 
getSVarS(int) - Method in interface si.ijs.kt.clus.statistic.ComponentStatistic
 
getSVarS(int) - Method in class si.ijs.kt.clus.statistic.RegressionStat
 
getSVarS(int) - Method in class si.ijs.kt.clus.statistic.RegressionStatBase
 
getSVarS(int) - Method in class si.ijs.kt.clus.statistic.RegressionStatBinaryNomiss
 
getSVarS(int) - Method in class si.ijs.kt.clus.statistic.WHTDStatistic
 
getSVarS(ClusAttributeWeights) - Method in class si.ijs.kt.clus.ext.beamsearch.ClusBeamSimClassStat
 
getSVarS(ClusAttributeWeights) - Method in class si.ijs.kt.clus.ext.beamsearch.ClusBeamSimRegrStat
 
getSVarS(ClusAttributeWeights) - Method in class si.ijs.kt.clus.statistic.ClassificationStat
 
getSVarS(ClusAttributeWeights) - Method in class si.ijs.kt.clus.statistic.ClusStatistic
 
getSVarS(ClusAttributeWeights) - Method in class si.ijs.kt.clus.statistic.CombStat
 
getSVarS(ClusAttributeWeights) - Method in class si.ijs.kt.clus.statistic.CombStatClassRegHier
 
getSVarS(ClusAttributeWeights) - Method in class si.ijs.kt.clus.statistic.RegressionStat
 
getSVarS(ClusAttributeWeights) - Method in class si.ijs.kt.clus.statistic.RegressionStatBinaryNomiss
 
getSVarS(ClusAttributeWeights) - Method in class si.ijs.kt.clus.statistic.WHTDStatistic
 
getSVarS(ClusAttributeWeights, RowData) - Method in class si.ijs.kt.clus.statistic.ClusStatistic
 
getSVarS(ClusAttributeWeights, RowData) - Method in class si.ijs.kt.clus.statistic.HierSumPairwiseDistancesStat
 
getSVarS(ClusAttributeWeights, RowData) - Method in class si.ijs.kt.clus.statistic.SumPairwiseDistancesStat
 
getSVarSDiff(int, RegressionStat) - Method in class si.ijs.kt.clus.statistic.RegressionStat
 
getSVarSDiff(ClusAttributeWeights, ClusStatistic) - Method in class si.ijs.kt.clus.statistic.ClassificationStat
 
getSVarSDiff(ClusAttributeWeights, ClusStatistic) - Method in class si.ijs.kt.clus.statistic.ClusStatistic
 
getSVarSDiff(ClusAttributeWeights, ClusStatistic) - Method in class si.ijs.kt.clus.statistic.CombStat
 
getSVarSDiff(ClusAttributeWeights, ClusStatistic) - Method in class si.ijs.kt.clus.statistic.CombStatClassRegHier
 
getSVarSDiff(ClusAttributeWeights, ClusStatistic) - Method in class si.ijs.kt.clus.statistic.RegressionStat
 
getSVarSDiff(ClusAttributeWeights, ClusStatistic) - Method in class si.ijs.kt.clus.statistic.RegressionStatBinaryNomiss
 
getSVarSDiff(ClusAttributeWeights, ClusStatistic) - Method in class si.ijs.kt.clus.statistic.WHTDStatistic
 
getSVarSDiff(ClusAttributeWeights, ClusStatistic, RowData) - Method in class si.ijs.kt.clus.statistic.ClusStatistic
 
getSVarSDiffHMTR(ClusAttributeWeights, ClusStatistic) - Method in class si.ijs.kt.clus.statistic.RegressionStat
 
getSVarSDiffROS(ClusAttributeWeights, ClusStatistic) - Method in class si.ijs.kt.clus.statistic.ClassificationStat
 
getSVarSDiffROS(ClusAttributeWeights, ClusStatistic) - Method in class si.ijs.kt.clus.statistic.RegressionStat
 
getSVarSHMTR(ClusAttributeWeights) - Method in class si.ijs.kt.clus.statistic.RegressionStat
 
getSVarSROS(ClusAttributeWeights) - Method in class si.ijs.kt.clus.statistic.ClassificationStat
 
geTSWeight() - Method in class si.ijs.kt.clus.ext.structuredTypes.Tuple
 
geTSWeight() - Method in class si.ijs.kt.clus.ext.timeseries.TimeSeries
 
getSymbolicWeights() - Method in class si.ijs.kt.clus.main.settings.section.SettingsEnsemble
 
getT1() - Method in class si.ijs.kt.clus.ext.ilevelc.ILevelConstraint
 
getT2() - Method in class si.ijs.kt.clus.ext.ilevelc.ILevelConstraint
 
getTable() - Method in class si.ijs.kt.clus.data.type.hierarchies.ClassesAttrType
 
getTable() - Method in class si.ijs.kt.clus.ext.hierarchical.HierIO
 
getTableContentsColumnBlocks() - Method in class si.ijs.kt.clus.ext.featureRanking.Fimp
 
getTableHeaderColumnBlocks() - Method in class si.ijs.kt.clus.ext.featureRanking.Fimp
 
getTarget() - Method in class si.ijs.kt.clus.data.ClusSchema
Methods for working with interval collections of attributes *
getTarget() - Method in class si.ijs.kt.clus.main.settings.section.SettingsAttribute
 
getTargetAttribute(int) - Method in class si.ijs.kt.clus.ext.featureRanking.relief.ClusReliefFeatureRanking
 
getTargetAttributes() - Method in class si.ijs.kt.clus.data.ClusSchema
 
getTargetDistance() - Method in class si.ijs.kt.clus.ext.featureRanking.relief.nearestNeighbour.NearestNeighbour
Deprecated.
getTargetMode() - Method in class si.ijs.kt.clus.main.ClusStatManager
 
getTargetNames() - Method in class si.ijs.kt.clus.statistic.ClassificationStat
 
getTargetNames() - Method in class si.ijs.kt.clus.statistic.WHTDStatistic
 
getTargetProbability(int, int) - Method in class si.ijs.kt.clus.ext.featureRanking.relief.ClusReliefFeatureRanking
 
getTargets() - Method in class si.ijs.kt.clus.ext.ensemble.ros.ClusROSModelInfo
 
getTargetsDisabled() - Method in class si.ijs.kt.clus.ext.ensemble.ros.ClusROSModelInfo
 
getTargetSet(TargetSet, Chromosome) - Static method in class si.ijs.kt.clus.addon.sit.searchAlgorithm.GeneticSearch
 
getTargetsNotLearned() - Method in class si.ijs.kt.clus.ext.ensemble.ros.ClusROSForestInfo
 
getTargetStat() - Method in class si.ijs.kt.clus.algo.rules.ClusRule
 
getTargetStat() - Method in class si.ijs.kt.clus.algo.rules.ClusRuleSet
 
getTargetStat() - Method in class si.ijs.kt.clus.algo.tdidt.ClusNode
 
getTargetStat() - Method in class si.ijs.kt.clus.ext.optiontree.MyNode
 
getTargetStat() - Method in class si.ijs.kt.clus.util.tools.optimization.OptimizationProblem
 
getTargetSumWeights() - Method in class si.ijs.kt.clus.statistic.BitVectorStat
 
getTargetSumWeights() - Method in class si.ijs.kt.clus.statistic.ClassificationStat
 
getTargetSumWeights() - Method in class si.ijs.kt.clus.statistic.ClusStatistic
Provides sum of weights of target attributes
getTargetSumWeights() - Method in class si.ijs.kt.clus.statistic.CombStat
Provides sum of weights of target attributes
getTargetSumWeights() - Method in class si.ijs.kt.clus.statistic.CombStatClassRegHier
Provides sum of weights of target attributes
getTargetSumWeights() - Method in class si.ijs.kt.clus.statistic.RegressionStat
 
getTargetSumWeights() - Method in class si.ijs.kt.clus.statistic.WHTDStatistic
Provides sum of weights of target attributes
getTargetType() - Method in class si.ijs.kt.clus.main.ClusStatManager
 
getTargetWeights() - Method in class si.ijs.kt.clus.pruning.SizeConstraintPruning
 
getTargMean(int) - Static method in class si.ijs.kt.clus.algo.rules.RuleNormalization
 
getTargStdDev(int) - Static method in class si.ijs.kt.clus.algo.rules.RuleNormalization
 
getTemporaryPythonTreeFileName(ClusRun, int) - Static method in class si.ijs.kt.clus.ext.ensemble.ClusEnsembleInduce
Returns the name of temporary python script, containing a single tree in the forests.
getTerm() - Method in class si.ijs.kt.clus.ext.hierarchical.ClassesValue
 
getTermAt(int) - Method in class si.ijs.kt.clus.ext.hierarchical.ClassHierarchy
 
getTest() - Method in class si.ijs.kt.clus.algo.tdidt.ClusNode
 
getTest() - Method in class si.ijs.kt.clus.ext.optiontree.ClusSplitNode
 
getTest() - Method in class si.ijs.kt.clus.ext.optxval.OptXValGroup
 
getTest() - Method in class si.ijs.kt.clus.ext.optxval.OptXValSplit
 
getTest(int) - Method in class si.ijs.kt.clus.algo.rules.ClusRule
 
getTestError() - Method in class si.ijs.kt.clus.main.ClusModelInfoList
 
getTestError() - Method in class si.ijs.kt.clus.main.ClusRun
 
getTestError() - Method in class si.ijs.kt.clus.main.ClusSummary
 
getTestError() - Method in class si.ijs.kt.clus.model.ClusModelInfo
 
getTestFile() - Method in class si.ijs.kt.clus.main.settings.section.SettingsData
 
getTestIter() - Method in class si.ijs.kt.clus.main.ClusRun
 
getTestProportion() - Method in class si.ijs.kt.clus.main.settings.section.SettingsData
 
getTests() - Method in class si.ijs.kt.clus.algo.rules.ClusRule
 
getTestSelection() - Method in class si.ijs.kt.clus.main.ClusRun
 
getTestSet() - Method in class si.ijs.kt.clus.main.ClusRun
 
getTestString() - Method in class si.ijs.kt.clus.algo.split.CurrentBestTestAndHeuristic
 
getTestString() - Method in class si.ijs.kt.clus.algo.tdidt.ClusNode
 
getTestString() - Method in class si.ijs.kt.clus.ext.optiontree.ClusSplitNode
 
getTestString() - Method in class si.ijs.kt.clus.ext.optiontree.TestAndHeuristic
 
getTestString() - Method in class si.ijs.kt.clus.model.test.NodeTest
 
getTestString(int) - Method in class si.ijs.kt.clus.model.test.NodeTest
 
getThird() - Method in class si.ijs.kt.clus.util.tuple.Quadruple
 
getThird() - Method in class si.ijs.kt.clus.util.tuple.Triple
 
getThreshold() - Method in class si.ijs.kt.clus.ext.ensemble.ClusForest
 
getThreshold() - Method in class si.ijs.kt.clus.ext.hierarchical.thresholdcalibration.calibrateByLabelCardinality
 
getThreshold() - Method in interface si.ijs.kt.clus.ext.hierarchical.thresholdcalibration.HierThresholdCalibration
 
getThreshold() - Method in class si.ijs.kt.clus.statistic.WHTDStatistic
 
getThreshold(int) - Method in class si.ijs.kt.clus.ext.hierarchical.HierClassTresholdPruner
 
getThresholds() - Method in class si.ijs.kt.clus.statistic.WHTDStatistic
 
getTime() - Static method in class si.ijs.kt.clus.util.ResourceInfo
 
getTimeBudget() - Method in class si.ijs.kt.clus.main.settings.section.SettingsEnsemble
 
getTimes() - Method in class si.ijs.kt.clus.ext.optxval.OptXValBinTree
 
getTimeSeries() - Method in class si.ijs.kt.clus.main.settings.Settings
 
getTimeSeries(DataTuple) - Method in class si.ijs.kt.clus.data.type.primitive.TimeSeriesAttrType
 
getTimeSeriesAttrUse(ClusAttrType.AttributeUseType) - Method in class si.ijs.kt.clus.data.ClusSchema
 
getTimeSeriesDistance() - Method in class si.ijs.kt.clus.main.settings.section.SettingsTimeSeries
 
getTimeSeriesHeuristicSampling() - Method in class si.ijs.kt.clus.main.settings.section.SettingsTimeSeries
 
getTimeSeriesLength(TimeSeriesAttrType, RowData) - Method in class si.ijs.kt.clus.ext.timeseries.TimeSeriesSignificantChangeTesterXVAL
 
getTimeSeriesPred() - Method in class si.ijs.kt.clus.ext.timeseries.TimeSeriesStat
 
getTimeSeriesPred() - Method in class si.ijs.kt.clus.statistic.ClusStatistic
 
getToken() - Method in class si.ijs.kt.clus.util.jeans.util.MStreamTokenizer
 
getToken() - Method in class si.ijs.kt.clus.util.jeans.util.MStringTokenizer
 
getToken() - Method in class si.ijs.kt.clus.util.jeans.util.MTokenizer
 
getTokens() - Method in class si.ijs.kt.clus.data.io.ClusReader
 
getTokens() - Method in class si.ijs.kt.clus.model.io.ClusTreeReader
 
getTop() - Method in class si.ijs.kt.clus.util.jeans.util.IntegerStack
 
getTotal() - Method in class si.ijs.kt.clus.ext.hierarchical.ClassHierarchy
Returns the number of terms in the hierarchy.
getTotal() - Method in class si.ijs.kt.clus.util.jeans.util.IntervalCollection
 
getTotalInputNbMissing() - Method in class si.ijs.kt.clus.data.ClusSchema
 
getTotalRuns() - Method in class si.ijs.kt.clus.main.ClusSummary
 
getTotalSize() - Method in class si.ijs.kt.clus.addon.hmc.HMCAverageSingleClass.HMCAverageNodeWiseModels
 
getTotalTreeSize() - Method in class si.ijs.kt.clus.algo.tdidt.ClusNode
 
getTotalWeight() - Method in class si.ijs.kt.clus.statistic.ClusStatistic
 
getTotNoUnkW() - Method in class si.ijs.kt.clus.algo.split.CurrentBestTestAndHeuristic
 
getTotNoUnkW() - Method in class si.ijs.kt.clus.ext.optiontree.TestAndHeuristic
 
getTotStat() - Method in class si.ijs.kt.clus.algo.split.CurrentBestTestAndHeuristic
 
getTotStat() - Method in class si.ijs.kt.clus.ext.optiontree.TestAndHeuristic
 
getTotStat(int) - Method in class si.ijs.kt.clus.ext.optxval.OptXValGroup
 
getTotWeight() - Method in class si.ijs.kt.clus.algo.split.CurrentBestTestAndHeuristic
 
getTotWeight() - Method in class si.ijs.kt.clus.algo.tdidt.ClusNode
 
getTotWeight() - Method in class si.ijs.kt.clus.ext.optiontree.TestAndHeuristic
 
getTP() - Method in class si.ijs.kt.clus.error.hmlc.HierClassWiseAccuracy
 
getTrainData() - Method in class si.ijs.kt.clus.heuristic.ClusHeuristic
 
getTrainDataHeurValue() - Method in class si.ijs.kt.clus.heuristic.ClusHeuristic
 
getTrainError() - Method in class si.ijs.kt.clus.main.ClusModelInfoList
 
getTrainError() - Method in class si.ijs.kt.clus.main.ClusRun
 
getTrainError() - Method in class si.ijs.kt.clus.main.ClusSummary
 
getTrainErrorScore() - Method in class si.ijs.kt.clus.algo.rules.ClusRule
 
getTraining() - Method in class si.ijs.kt.clus.statistic.RegressionStat
 
getTrainingError() - Method in class si.ijs.kt.clus.model.ClusModelInfo
 
getTrainingSet() - Method in class si.ijs.kt.clus.main.ClusRun
Training set
getTrainIter() - Method in class si.ijs.kt.clus.main.ClusRun
 
getTrainSetStat() - Method in class si.ijs.kt.clus.main.ClusStatManager
 
getTrainSetStat(ClusAttrType.AttributeUseType) - Method in class si.ijs.kt.clus.main.ClusStatManager
 
getTree() - Method in class si.ijs.kt.clus.main.settings.Settings
 
getTree(int) - Method in class si.ijs.kt.clus.ext.optxval.OptXValNode
 
getTreeFile(String) - Static method in class si.ijs.kt.clus.ext.ensemble.ClusForest
 
getTreeMaxDepth() - Method in class si.ijs.kt.clus.main.settings.section.SettingsConstraints
 
getTreeNumber() - Method in class si.ijs.kt.clus.ext.ensemble.ros.ClusROSModelInfo
 
getTreePruner(ClusData) - Method in class si.ijs.kt.clus.main.ClusStatManager
 
getTreePrunerNoVSB() - Method in class si.ijs.kt.clus.main.ClusStatManager
 
getTreeSplitSampling() - Method in class si.ijs.kt.clus.main.settings.section.SettingsTree
To find the best split, heuristic can be calculated on a random sample of the training set to conserve time
getTrimmedInfo(int) - Method in class si.ijs.kt.clus.ext.ensemble.ros.ClusEnsembleROSInfo
Returns a trimmed variant of current object, containing only numberOfSubspaces ROS subspaces
getTrueValue(int, int) - Method in class si.ijs.kt.clus.util.tools.optimization.OptimizationProblem
 
getTSDistance() - Method in class si.ijs.kt.clus.main.settings.section.SettingsTree
 
getTTestPValue(int, ClusStatManager) - Method in class si.ijs.kt.clus.statistic.RegressionStatBase
Computes a 2-sample t statistic, without the hypothesis of equal sub-population variances, and returns the p-value of a t test.
getTuneFolds() - Method in class si.ijs.kt.clus.main.settings.section.SettingsModel
 
getTuple() - Method in class si.ijs.kt.clus.algo.kNN.methods.NN
 
getTuple() - Method in class si.ijs.kt.clus.algo.kNN.methods.vpTree.VPItem
 
getTuple(boolean[]) - Method in class si.ijs.kt.clus.ext.hierarchical.ClassHierarchy
 
getTuple(int) - Method in class si.ijs.kt.clus.data.rows.RowData
 
getTuple(DataTuple) - Method in class si.ijs.kt.clus.data.type.complex.TupleAttrType
 
getTupleDistance() - Method in class si.ijs.kt.clus.main.settings.section.SettingsTree
 
getTupleIndex(int) - Method in class si.ijs.kt.clus.statistic.GeneticDistanceStat
 
getTuplePred() - Method in class si.ijs.kt.clus.ext.structuredTypes.TupleStatistic
 
getTuples() - Method in class si.ijs.kt.clus.algo.kNN.methods.kdTree.KDNode
Returns list of all tuples belonging to this node.
getTValueSigTest(SingleStatList) - Method in class si.ijs.kt.clus.util.jeans.math.SingleStatList
 
getType() - Method in class si.ijs.kt.clus.data.cols.attribute.ClusAttribute
 
getType() - Method in class si.ijs.kt.clus.data.cols.attribute.NominalAttrBase
 
getType() - Method in class si.ijs.kt.clus.data.cols.attribute.NumericAttrBase
 
getType() - Method in class si.ijs.kt.clus.data.cols.attribute.TimeSeriesAttrBase
 
getType() - Method in class si.ijs.kt.clus.data.type.ClusAttrType
 
getType() - Method in class si.ijs.kt.clus.ext.hierarchical.ClassHierarchy
 
getType() - Method in class si.ijs.kt.clus.ext.ilevelc.ILevelConstraint
 
getType() - Method in class si.ijs.kt.clus.ext.optxval.SoftNumericTest
 
getType() - Static method in class si.ijs.kt.clus.model.processor.ClusEnsemblePredictionWriter
 
getType() - Method in class si.ijs.kt.clus.model.test.ClusRuleConstraintInduceTest
 
getType() - Method in class si.ijs.kt.clus.model.test.FakeTest
 
getType() - Method in class si.ijs.kt.clus.model.test.NodeTest
Attribute type
getType() - Method in class si.ijs.kt.clus.model.test.NominalTest
 
getType() - Method in class si.ijs.kt.clus.model.test.NumericTest
 
getType() - Method in class si.ijs.kt.clus.model.test.SubsetTest
 
getType() - Method in class si.ijs.kt.clus.util.jeans.io.ini.INIFileArray
 
getType() - Method in class si.ijs.kt.clus.util.jeans.io.ini.INIFileNominal
 
getType() - Method in class si.ijs.kt.clus.util.jeans.io.ini.INIFileNominalOrDoubleOrVector
 
getType() - Method in class si.ijs.kt.clus.util.jeans.io.ini.INIFileNominalOrIntOrVector
 
getTypeDefinition() - Method in class si.ijs.kt.clus.data.type.ClusAttrType
 
getTypeDefinition() - Method in class si.ijs.kt.clus.data.type.complex.SetAttrType
 
getTypeName() - Method in class si.ijs.kt.clus.data.type.ClusAttrType
 
getTypeName() - Method in class si.ijs.kt.clus.data.type.complex.SetAttrType
 
getTypeName() - Method in class si.ijs.kt.clus.data.type.complex.TupleAttrType
 
getTypeName() - Method in class si.ijs.kt.clus.data.type.hierarchies.ClassesAttrType
 
getTypeName() - Method in class si.ijs.kt.clus.data.type.primitive.IndexAttrType
 
getTypeName() - Method in class si.ijs.kt.clus.data.type.primitive.IntegerAttrType
 
getTypeName() - Method in class si.ijs.kt.clus.data.type.primitive.NominalAttrType
 
getTypeName() - Method in class si.ijs.kt.clus.data.type.primitive.NumericAttrType
 
getTypeName() - Method in class si.ijs.kt.clus.data.type.primitive.StringAttrType
 
getTypeName() - Method in class si.ijs.kt.clus.data.type.primitive.TimeSeriesAttrType
 
getTypeString() - Method in class si.ijs.kt.clus.data.type.primitive.NominalAttrType
 
getUncovered(int) - Method in class si.ijs.kt.clus.algo.rules.ClusRuleSet
Calculate a BitSet vector of uncovered examples with respect to the input data
getUnionCardinality(Set, Set, ClusDistance) - Static method in class si.ijs.kt.clus.ext.structuredTypes.SetOperations
 
getUnknownFreq() - Method in class si.ijs.kt.clus.algo.tdidt.ClusNode
 
getUnknownFreq() - Method in class si.ijs.kt.clus.model.test.NodeTest
 
getUnlabeledCriteria() - Method in class si.ijs.kt.clus.main.settings.section.SettingsSSL
 
getUnlabeledFile() - Method in class si.ijs.kt.clus.main.settings.section.SettingsSSL
 
getUnlabeledIter() - Method in class si.ijs.kt.clus.main.ClusRun
 
getUnlabeledSet() - Method in class si.ijs.kt.clus.main.ClusRun
 
getUseWeights() - Method in class si.ijs.kt.clus.main.settings.section.SettingsSSL
 
getValidationError() - Method in class si.ijs.kt.clus.main.ClusModelInfoList
 
getValidationError() - Method in class si.ijs.kt.clus.main.ClusRun
 
getValidationError() - Method in class si.ijs.kt.clus.main.ClusSummary
 
getValidationError() - Method in class si.ijs.kt.clus.model.ClusModelInfo
 
getValidationSetPercentage() - Method in class si.ijs.kt.clus.main.settings.section.SettingsRules
Percentage of training data to use as validation set when selecting the best sampled rule set
getValue() - Method in class si.ijs.kt.clus.ext.beamsearch.ClusBeamModel
 
getValue() - Method in class si.ijs.kt.clus.ext.semisupervised.utils.IndiceValuePair
 
getValue() - Method in class si.ijs.kt.clus.util.jeans.io.ini.INIFileBool
 
getValue() - Method in class si.ijs.kt.clus.util.jeans.io.ini.INIFileDouble
 
getValue() - Method in class si.ijs.kt.clus.util.jeans.io.ini.INIFileEnum
 
getValue() - Method in class si.ijs.kt.clus.util.jeans.io.ini.INIFileEnumList
 
getValue() - Method in class si.ijs.kt.clus.util.jeans.io.ini.INIFileInt
 
getValue() - Method in class si.ijs.kt.clus.util.jeans.io.ini.INIFileNominal
 
getValue() - Method in class si.ijs.kt.clus.util.jeans.io.ini.INIFileString
 
getValue() - Method in class si.ijs.kt.clus.util.jeans.io.ini.INIFileStringOrDouble
 
getValue() - Method in class si.ijs.kt.clus.util.jeans.io.ini.INIFileStringOrInt
 
getValue() - Method in class si.ijs.kt.clus.util.jeans.util.compound.DoubleObject
 
getValue() - Method in class si.ijs.kt.clus.util.jeans.util.compound.IntObject
 
getValue() - Method in class si.ijs.kt.clus.util.jeans.util.list.MyIntList
 
getValue(int) - Method in class si.ijs.kt.clus.data.type.primitive.IndexAttrType
 
getValue(int) - Method in class si.ijs.kt.clus.data.type.primitive.NominalAttrType
 
getValue(int) - Method in class si.ijs.kt.clus.ext.structuredTypes.Tuple
 
getValue(int) - Method in class si.ijs.kt.clus.ext.timeseries.TimeSeries
 
getValue(int) - Method in class si.ijs.kt.clus.model.test.SubsetTest
 
getValue(int) - Method in interface si.ijs.kt.clus.util.jeans.math.matrix.MySparseVector
 
getValue(String) - Method in class si.ijs.kt.clus.util.jeans.io.range.NominalType
 
getValue(ClusReader, String) - Method in class si.ijs.kt.clus.data.type.primitive.IndexAttrType.MyReader
 
getValue(DataTuple) - Method in class si.ijs.kt.clus.data.type.hierarchies.ClassesAttrType
 
getValue(DataTuple, ClusAttrType) - Method in class si.ijs.kt.clus.distance.primitive.SearchDistance
Returns value for a given tuple and attribute.
getValueIndex(String) - Method in class si.ijs.kt.clus.data.type.primitive.NominalAttrType
 
getValueOrMissing(int) - Method in class si.ijs.kt.clus.data.type.primitive.NominalAttrType
 
getValues() - Method in class si.ijs.kt.clus.data.type.primitive.NominalAttrType
 
getValues() - Method in class si.ijs.kt.clus.ext.structuredTypes.Set
 
getValues() - Method in class si.ijs.kt.clus.ext.structuredTypes.Tuple
 
getValues() - Method in class si.ijs.kt.clus.ext.timeseries.TimeSeries
 
getValues() - Method in class si.ijs.kt.clus.util.jeans.math.SingleStatList
 
getValuesNoCopy() - Method in class si.ijs.kt.clus.ext.structuredTypes.Set
 
getValuesNoCopy() - Method in class si.ijs.kt.clus.ext.structuredTypes.Tuple
 
getValuesNoCopy() - Method in class si.ijs.kt.clus.ext.timeseries.TimeSeries
 
getValueType() - Method in class si.ijs.kt.clus.data.type.BitwiseNominalAttrType
 
getValueType() - Method in class si.ijs.kt.clus.data.type.ClusAttrType
 
getValueType() - Method in class si.ijs.kt.clus.data.type.complex.SetAttrType
 
getValueType() - Method in class si.ijs.kt.clus.data.type.complex.TupleAttrType
 
getValueType() - Method in class si.ijs.kt.clus.data.type.hierarchies.ClassesAttrType
 
getValueType() - Method in class si.ijs.kt.clus.data.type.primitive.IndexAttrType
 
getValueType() - Method in class si.ijs.kt.clus.data.type.primitive.IntegerAttrType
 
getValueType() - Method in class si.ijs.kt.clus.data.type.primitive.NominalAttrType
 
getValueType() - Method in class si.ijs.kt.clus.data.type.primitive.NumericAttrType
 
getValueType() - Method in class si.ijs.kt.clus.data.type.primitive.SparseNumericAttrType
 
getValueType() - Method in class si.ijs.kt.clus.data.type.primitive.StringAttrType
 
getValueType() - Method in class si.ijs.kt.clus.data.type.primitive.TimeSeriesAttrType
 
getVarBasedDispNormWeight() - Method in class si.ijs.kt.clus.main.settings.section.SettingsRules
 
getVariance() - Method in class si.ijs.kt.clus.util.jeans.math.SingleStat
 
getVariance(double[]) - Static method in class si.ijs.kt.clus.ext.semisupervised.Helper
 
getVariance(int) - Method in class si.ijs.kt.clus.statistic.RegressionStatBase
 
getVarLisa(int) - Method in class si.ijs.kt.clus.statistic.GISStat
Deprecated.
 
getVarLisa(ClusAttributeWeights) - Method in class si.ijs.kt.clus.statistic.GISStat
Deprecated.
 
getVarLisaDiff(ClusAttributeWeights, ClusStatistic) - Method in class si.ijs.kt.clus.statistic.GISStat
Deprecated.
 
getVector() - Method in class si.ijs.kt.clus.util.jeans.io.ini.INIFileArray
 
getVector(ClassHierarchy) - Method in class si.ijs.kt.clus.ext.hierarchical.ClassesTuple
 
getVectorBoolean(ClassHierarchy) - Method in class si.ijs.kt.clus.ext.hierarchical.ClassesTuple
 
getVectorBooleanNodeAndAncestors(ClassHierarchy) - Method in class si.ijs.kt.clus.ext.hierarchical.ClassesTuple
 
getVectorLength() - Method in class si.ijs.kt.clus.util.jeans.io.ini.INIFileNominalOrDoubleOrVector
 
getVectorLength() - Method in class si.ijs.kt.clus.util.jeans.io.ini.INIFileNominalOrIntOrVector
 
getVectorNodeAndAncestors(ClassHierarchy) - Method in class si.ijs.kt.clus.ext.hierarchical.ClassesTuple
 
getVectorSize() - Method in class si.ijs.kt.clus.util.jeans.io.ini.INIFileEnumList
 
getVectorString(DataTuple) - Method in class si.ijs.kt.clus.data.type.hierarchies.ClassesAttrType
 
getVerbose() - Method in class si.ijs.kt.clus.main.settings.section.SettingsGeneral
 
getViolatedConstraintsRCCC() - Method in class si.ijs.kt.clus.algo.rules.ClusRule
 
getVirtualRootWeight() - Method in interface si.ijs.kt.clus.distance.hierarchies.HierBasicDistance
 
getVirtualRootWeight() - Method in class si.ijs.kt.clus.distance.hierarchies.HierLevelDistance
 
getVirtualRootWeight() - Method in class si.ijs.kt.clus.distance.hierarchies.HierWeightSPath
 
getVirtualRootWeight() - Method in class si.ijs.kt.clus.distance.hierarchies.HierWPenalty
 
getVisitor() - Method in class si.ijs.kt.clus.algo.rules.ClusRule
 
getVisitor() - Method in class si.ijs.kt.clus.algo.tdidt.ClusNode
 
getVisitor(int) - Method in class si.ijs.kt.clus.util.jeans.util.Visitable
 
getVotes() - Method in class si.ijs.kt.clus.ext.ensemble.ClusForest
 
getVotesForTuple(DataTuple) - Static method in class si.ijs.kt.clus.ext.ensemble.ClusOOBErrorEstimate
 
getVPItem() - Method in class si.ijs.kt.clus.algo.kNN.methods.vpTree.VPNode
 
getWeight() - Method in class si.ijs.kt.clus.data.rows.DataTuple
 
getWeight(int) - Method in class si.ijs.kt.clus.algo.kNN.distance.valentin.VectorDistance
 
getWeight(int) - Method in class si.ijs.kt.clus.data.attweights.ClusAttributeWeights
 
getWeight(int) - Method in class si.ijs.kt.clus.data.attweights.ClusNormalizedAttributeWeights
 
getWeight(int) - Method in class si.ijs.kt.clus.distance.hierarchies.HierWeightSPath
 
getWeight(int) - Method in class si.ijs.kt.clus.distance.hierarchies.HierWPenalty
 
getWeight(int) - Method in class si.ijs.kt.clus.ext.hierarchical.ClassHierarchy
 
getWeight(int) - Method in class si.ijs.kt.clus.ext.hierarchical.HierNodeWeights
 
getWeight(int) - Method in class si.ijs.kt.clus.selection.BagSelection
 
getWeight(int) - Method in class si.ijs.kt.clus.selection.ClusSelection
 
getWeight(int) - Method in class si.ijs.kt.clus.selection.OOBSelection
 
getWeight(String) - Method in class si.ijs.kt.clus.ext.hierarchicalmtr.ClusHMTRHierarchy
 
getWeight(ClusAttrType) - Method in class si.ijs.kt.clus.algo.kNN.distance.attributeWeighting.AttributeWeighting
Returns weight for given attribute.
getWeight(ClusAttrType) - Method in class si.ijs.kt.clus.algo.kNN.distance.attributeWeighting.NoWeighting
 
getWeight(ClusAttrType) - Method in class si.ijs.kt.clus.algo.kNN.distance.attributeWeighting.RandomForestWeighting
 
getWeight(ClusAttrType) - Method in class si.ijs.kt.clus.algo.kNN.distance.attributeWeighting.UserDefinedWeighting
 
getWeight(ClusAttrType) - Method in class si.ijs.kt.clus.data.attweights.ClusAttributeWeights
 
getWeight(ClusAttrType) - Method in class si.ijs.kt.clus.data.attweights.ClusNormalizedAttributeWeights
 
getWeightCov(int, int) - Method in class si.ijs.kt.clus.util.tools.optimization.gd.GDProblem
Return the right stored covariance
getWeighting() - Method in class si.ijs.kt.clus.distance.ClusDistance
 
getWeightLabeled() - Method in class si.ijs.kt.clus.statistic.WHTDStatistic
Get weight of labeled examples, if there are
getWeightNeighbours() - Method in class si.ijs.kt.clus.ext.featureRanking.relief.ReliefModel
 
getWeights() - Method in class si.ijs.kt.clus.algo.rules.probabilistic.ClusRuleProbabilisticRuleSetInduceWeights
 
getWeights() - Method in class si.ijs.kt.clus.data.attweights.ClusAttributeWeights
 
getWeights() - Method in class si.ijs.kt.clus.ext.hierarchical.ClassHierarchy
 
getWeights() - Method in class si.ijs.kt.clus.ext.hierarchical.HierNodeWeights
 
getWeightsString() - Method in class si.ijs.kt.clus.algo.rules.probabilistic.ClusRuleProbabilisticRuleSetInduceWeights
 
getWorstModel() - Method in class si.ijs.kt.clus.ext.beamsearch.ClusBeam
 
getWorstNearestDistance() - Method in class si.ijs.kt.clus.algo.kNN.methods.NNStack
Returns distance of farthest nearest neighbor.
getWriter() - Method in class si.ijs.kt.clus.main.ClusOutput
 
getWriter() - Method in class si.ijs.kt.clus.util.jeans.io.MyFile
 
getWrt() - Method in class si.ijs.kt.clus.model.processor.PredictionWriter
 
getX() - Method in class si.ijs.kt.clus.util.jeans.math.SingleStatList
 
getXValFile() - Method in class si.ijs.kt.clus.main.settings.section.SettingsData
 
getXValFolds() - Method in class si.ijs.kt.clus.main.settings.section.SettingsData
 
getXValSelection() - Method in class si.ijs.kt.clus.Clus
 
getXValSelection(ClusData) - Method in class si.ijs.kt.clus.data.ClusSchema
 
getXValSelection(Settings, int) - Method in class si.ijs.kt.clus.algo.tdidt.tune.CDTuneSizeConstrPruning
 
getY() - Method in class si.ijs.kt.clus.util.jeans.math.SingleStatList
 
gini(int) - Method in class si.ijs.kt.clus.statistic.ClassificationStat
 
giniDifference(int, ClassificationStat) - Method in class si.ijs.kt.clus.statistic.ClassificationStat
 
GIS - Enum constant in enum class si.ijs.kt.clus.data.type.ClusAttrType.AttributeUseType
 
GIS - Enum constant in enum class si.ijs.kt.clus.data.type.ClusAttrType.Status
 
GISHeuristic - Class in si.ijs.kt.clus.heuristic
 
GISHeuristic(ClusAttributeWeights, ClusAttrType[], Settings) - Constructor for class si.ijs.kt.clus.heuristic.GISHeuristic
 
GISStat - Class in si.ijs.kt.clus.statistic
Deprecated.
GISStat(Settings, NumericAttrType[]) - Constructor for class si.ijs.kt.clus.statistic.GISStat
Deprecated.
 
GISStat(Settings, NumericAttrType[], boolean) - Constructor for class si.ijs.kt.clus.statistic.GISStat
Deprecated.
 
giveFormForWeightOptimization(PrintWriter, RowData) - Method in class si.ijs.kt.clus.algo.rules.ClusRuleSet
Returns the form of this rule set that can be used for weight optimization.
giveParallelisationWarning(ClusEnsembleInduce.ParallelTrap) - Static method in class si.ijs.kt.clus.ext.ensemble.ClusEnsembleInduce
 
Global - Class in si.ijs.kt.clus.main
 
Global() - Constructor for class si.ijs.kt.clus.main.Global
 
GlobalGeary - Enum constant in enum class si.ijs.kt.clus.main.settings.section.SettingsTree.SpatialMeasure
 
GlobalGearyDistance - Enum constant in enum class si.ijs.kt.clus.main.settings.section.SettingsTree.SpatialMeasure
 
GlobalGetis - Enum constant in enum class si.ijs.kt.clus.main.settings.section.SettingsTree.SpatialMeasure
 
globalInitialize(ClusSchema) - Method in class si.ijs.kt.clus.model.processor.PredictionWriter
 
GlobalMoran - Enum constant in enum class si.ijs.kt.clus.main.settings.section.SettingsTree.SpatialMeasure
 
GlobalMoranDistance - Enum constant in enum class si.ijs.kt.clus.main.settings.section.SettingsTree.SpatialMeasure
 
goDown(int) - Method in class si.ijs.kt.clus.util.jeans.tree.TreeIterator
 
gotoNext() - Method in class si.ijs.kt.clus.util.jeans.util.IntervalCollection
 
gotoNextNode() - Method in class si.ijs.kt.clus.util.jeans.tree.LeafTreeIterator
 
gotoPosition(long) - Method in class si.ijs.kt.clus.util.jeans.util.MStreamTokenizer
 
goUp() - Method in class si.ijs.kt.clus.util.jeans.tree.TreeIterator
 
greatestKelements(double[], int) - Static method in class si.ijs.kt.clus.ext.semisupervised.Helper
Returns K greatest elements of an array, together with indices
GreedySIT - Class in si.ijs.kt.clus.addon.sit.searchAlgorithm
 
GreedySIT() - Constructor for class si.ijs.kt.clus.addon.sit.searchAlgorithm.GreedySIT
 
grOrEq(double, double) - Static method in class si.ijs.kt.clus.util.ClusUtil
 
GROUP - Static variable in class si.ijs.kt.clus.util.jeans.util.MSStringTokenizer
 
grow - Variable in class si.ijs.kt.clus.util.jeans.util.IntegerStack
 
grow() - Method in class si.ijs.kt.clus.util.jeans.util.array.MDoubleArray
 
grow() - Method in class si.ijs.kt.clus.util.jeans.util.array.MIntArray
 
GSMDistance - Class in si.ijs.kt.clus.distance.complex.sets
 
GSMDistance - Enum constant in enum class si.ijs.kt.clus.main.settings.section.SettingsTree.SetDistance
 
GSMDistance(SetAttrType, ClusDistance, int) - Constructor for class si.ijs.kt.clus.distance.complex.sets.GSMDistance
 
GSMDistanceBitVector - Class in si.ijs.kt.clus.distance.complex.sets
 
GSMDistanceBitVector(SetAttrType, ClusDistance, int) - Constructor for class si.ijs.kt.clus.distance.complex.sets.GSMDistanceBitVector
 

H

H_EQ - Static variable in class si.ijs.kt.clus.model.test.NodeTest
 
HammingLoss - Class in si.ijs.kt.clus.error.mlc
Hamming loss is used in multi-label classification scenario.
HammingLoss - Class in si.ijs.kt.clus.error.mlcForHmlc
 
HammingLoss - Enum constant in enum class si.ijs.kt.clus.main.settings.section.SettingsMLC.MultiLabelMeasures
 
HammingLoss - Enum constant in enum class si.ijs.kt.clus.main.settings.section.SettingsRelief.MultilabelDistance
 
HammingLoss - Enum constant in enum class si.ijs.kt.clus.main.settings.section.SettingsTree.SetDistance
 
HammingLoss() - Constructor for class si.ijs.kt.clus.error.mlcForHmlc.HammingLoss
 
HammingLoss(ClusErrorList, NominalAttrType[]) - Constructor for class si.ijs.kt.clus.error.mlc.HammingLoss
 
HammingLossDistance - Class in si.ijs.kt.clus.distance.complex.sets
 
HammingLossDistance(SetAttrType, ClusDistance) - Constructor for class si.ijs.kt.clus.distance.complex.sets.HammingLossDistance
 
HammingLossDistance(SetAttrType, ClusDistance, int) - Constructor for class si.ijs.kt.clus.distance.complex.sets.HammingLossDistance
 
HammingLossDistance(ClusDistance, int) - Constructor for class si.ijs.kt.clus.distance.complex.sets.HammingLossDistance
 
HammingLossError - Class in si.ijs.kt.clus.error.sets
 
HammingLossError(ClusErrorList, SetAttrType[], ClusAttributeWeights, boolean, ClusDistance, int) - Constructor for class si.ijs.kt.clus.error.sets.HammingLossError
 
HammingLossError(ClusErrorList, SetAttrType[], ClusAttributeWeights, ClusDistance, int) - Constructor for class si.ijs.kt.clus.error.sets.HammingLossError
 
HammingLossError(ClusErrorList, SetAttrType[], ClusDistance, int) - Constructor for class si.ijs.kt.clus.error.sets.HammingLossError
 
hasActiveChild(ClassTerm, boolean[]) - Static method in class si.ijs.kt.clus.ext.hierarchical.HierIO
 
hasArrayIndexNames() - Method in class si.ijs.kt.clus.util.jeans.io.ini.INIFileNominalOrDoubleOrVector
 
hasAttrHeuristic() - Method in class si.ijs.kt.clus.ext.beamsearch.ClusBeamSearch
 
hasAttrHeuristic() - Method in class si.ijs.kt.clus.ext.exhaustivesearch.ClusExhaustiveSearch
 
hasAttributeType(ClusAttrType.AttributeUseType, ClusAttrType.AttributeType) - Method in class si.ijs.kt.clus.data.ClusSchema
 
hasBeamConstraintFile() - Method in class si.ijs.kt.clus.main.settings.section.SettingsBeamSearch
 
hasBestTest() - Method in class si.ijs.kt.clus.algo.split.CurrentBestTestAndHeuristic
 
hasBestTest() - Method in class si.ijs.kt.clus.algo.tdidt.ClusNode
Inspectors concerning test
hasBestTest() - Method in class si.ijs.kt.clus.ext.optiontree.TestAndHeuristic
 
hasBitEqualToOne(boolean[]) - Static method in class si.ijs.kt.clus.main.ClusStatManager
 
hasBothPosAndNegEx() - Method in class si.ijs.kt.clus.error.BinaryPredictionList
 
hasBranchLabels() - Method in class si.ijs.kt.clus.model.test.NodeTest
 
hasBranchLabels() - Method in class si.ijs.kt.clus.model.test.NominalTest
 
hasChildren() - Method in class si.ijs.kt.clus.ext.hierarchicalmtr.ClusHMTRNode
 
hasChildrenIn(boolean[]) - Method in class si.ijs.kt.clus.ext.hierarchical.ClassTerm
 
hasClass(int) - Method in class si.ijs.kt.clus.ext.hierarchical.ClassesTuple
 
hasClusteringStat() - Method in class si.ijs.kt.clus.main.ClusStatManager
 
hasConstants() - Method in class si.ijs.kt.clus.model.test.ClusRuleConstraintInduceTest
 
hasConstants() - Method in class si.ijs.kt.clus.model.test.NodeTest
 
hasConstants() - Method in class si.ijs.kt.clus.model.test.NumericTest
 
hasConstants() - Method in class si.ijs.kt.clus.model.test.SubsetTest
 
hasConstraintFile() - Method in class si.ijs.kt.clus.main.settings.section.SettingsConstraints
 
hasDefinitionFile() - Method in class si.ijs.kt.clus.main.settings.section.SettingsHMLC
 
hasErrors() - Method in class si.ijs.kt.clus.algo.rules.ClusRule
 
hasEvaluations() - Method in class si.ijs.kt.clus.ext.beamsearch.ClusBeamAttrSelector
 
hasExtraError(int) - Method in class si.ijs.kt.clus.model.ClusModelInfo
 
hashCode() - Method in class si.ijs.kt.clus.algo.rules.ClusRule
 
hashCode() - Method in class si.ijs.kt.clus.algo.tdidt.ClusNode
 
hashCode() - Method in class si.ijs.kt.clus.ext.beamsearch.ClusBeamModel
 
hashCode() - Method in class si.ijs.kt.clus.model.test.ClusRuleConstraintInduceTest
 
hashCode() - Method in class si.ijs.kt.clus.model.test.InverseNumericTest
 
hashCode() - Method in class si.ijs.kt.clus.model.test.NodeTest
 
hashCode() - Method in class si.ijs.kt.clus.model.test.NominalTest
 
hashCode() - Method in class si.ijs.kt.clus.model.test.NumericTest
 
hashCode() - Method in class si.ijs.kt.clus.model.test.SubsetTest
 
hashCode() - Method in class si.ijs.kt.clus.util.jeans.util.compound.DoubleBoolean
Hash function that is used for adding objects of the type DoubleBooleanCount to the clus.error.BinaryPredictionList.m_ValueSet.
hashCode() - Method in class si.ijs.kt.clus.util.UniqueNodeIdentifier
 
hasHierEvalClasses() - Method in class si.ijs.kt.clus.main.settings.section.SettingsHMLC
 
hasILevelCFile() - Method in class si.ijs.kt.clus.main.settings.section.SettingsILevelC
 
hasList() - Method in class si.ijs.kt.clus.ext.beamsearch.ClusBeamTreeElem
 
hasList() - Method in class si.ijs.kt.clus.ext.beamsearch.ClusBeamTreeElemOld
 
hasMissing() - Method in class si.ijs.kt.clus.data.ClusSchema
Methods concerning missing values *
hasMissing() - Method in class si.ijs.kt.clus.data.type.ClusAttrType
 
hasModel() - Method in class si.ijs.kt.clus.model.ClusModelInfo
 
hasModel(int) - Method in class si.ijs.kt.clus.main.ClusModelInfoList
 
hasMoreAreas() - Method in class si.ijs.kt.clus.util.jeans.tree.BottomLevelIterator
 
hasMoreElements() - Method in class si.ijs.kt.clus.util.jeans.util.EnumerationGenerator
Returns true if there are still elements to be returned by the Enumeration.
hasMoreElements() - Method in class si.ijs.kt.clus.util.jeans.util.MSStringTokenizer
 
hasMoreInts() - Method in class si.ijs.kt.clus.util.jeans.util.IntervalCollection
 
hasMoreNodes() - Method in class si.ijs.kt.clus.util.jeans.tree.CompleteTreeIterator
 
hasMoreNodes() - Method in class si.ijs.kt.clus.util.jeans.tree.LeafTreeIterator
 
hasMoreTokens() - Method in class si.ijs.kt.clus.data.io.ClusReader
 
hasMoreTokens() - Method in class si.ijs.kt.clus.util.jeans.util.MSStringTokenizer
 
hasMoreTokens() - Method in class si.ijs.kt.clus.util.jeans.util.MStreamTokenizer
 
hasMoreTokens() - Method in class si.ijs.kt.clus.util.jeans.util.MStringTokenizer
 
hasMoreTokens() - Method in class si.ijs.kt.clus.util.jeans.util.MTokenizer
 
hasMoreTokens() - Method in class si.ijs.kt.clus.util.jeans.util.MultiDelimStringTokenizer
 
hasName() - Method in class si.ijs.kt.clus.model.ClusModelInfo
 
hasNext() - Method in class si.ijs.kt.clus.util.jeans.util.list.MyListIter
 
hasNonTrivialWeights() - Method in class si.ijs.kt.clus.main.settings.section.SettingsAttribute
 
hasNumMissing(int) - Method in class si.ijs.kt.clus.data.rows.DataTuple
Checks if the numeric attribute at a specified location is missing.
hasOption(String) - Method in class si.ijs.kt.clus.util.jeans.util.cmdline.CMDLineArgs
 
hasParent() - Method in class si.ijs.kt.clus.util.jeans.io.ini.INIFileNode
 
hasParents(ClusHMTRNode) - Method in class si.ijs.kt.clus.ext.hierarchicalmtr.ClusHMTRHierarchy
 
hasPrediction() - Method in class si.ijs.kt.clus.algo.rules.ClusRule
 
hasPruneSet() - Method in class si.ijs.kt.clus.Clus
 
hasRandomSeed() - Method in class si.ijs.kt.clus.main.settings.section.SettingsGeneral
 
hasRuleErrors() - Method in class si.ijs.kt.clus.algo.rules.ClusRuleSet
 
hasSummary() - Method in class si.ijs.kt.clus.error.NominalCorrelation
 
hasSummary() - Method in class si.ijs.kt.clus.error.PearsonCorrelation
 
hasSummary() - Method in class si.ijs.kt.clus.error.SpearmanRankCorrelation
 
hasTestError() - Method in class si.ijs.kt.clus.main.ClusSummary
 
hasTestError() - Method in class si.ijs.kt.clus.model.ClusModelInfo
 
hasTestSet() - Method in class si.ijs.kt.clus.Clus
 
hasTrainError() - Method in class si.ijs.kt.clus.model.ClusModelInfo
 
hasTreeOptimize(SettingsTree.TreeOptimizeValues) - Method in class si.ijs.kt.clus.main.settings.section.SettingsTree
 
hasUnknownBranch() - Method in class si.ijs.kt.clus.algo.tdidt.ClusNode
 
hasUnknownBranch() - Method in class si.ijs.kt.clus.model.test.NodeTest
 
hasValidError() - Method in class si.ijs.kt.clus.model.ClusModelInfo
 
hasVector() - Method in class si.ijs.kt.clus.util.jeans.io.ini.INIFileNominalOrDoubleOrVector
 
hasWord(String) - Method in class si.ijs.kt.clus.util.tools.textproc.StopList
 
Helper - Class in si.ijs.kt.clus.ext.semisupervised
Some handy functions
Helper() - Constructor for class si.ijs.kt.clus.ext.semisupervised.Helper
 
HEURISTIC_ERROR - Static variable in class si.ijs.kt.clus.ext.beamsearch.ClusBeamSearch
 
HEURISTIC_ERROR - Static variable in class si.ijs.kt.clus.ext.exhaustivesearch.ClusExhaustiveSearch
 
HEURISTIC_SS - Static variable in class si.ijs.kt.clus.ext.beamsearch.ClusBeamSearch
 
HEURISTIC_SS - Static variable in class si.ijs.kt.clus.ext.exhaustivesearch.ClusExhaustiveSearch
 
HeuristicComparator() - Constructor for class si.ijs.kt.clus.ext.optiontree.FindBestTests.HeuristicComparator
 
heuristicNeedsCombStat() - Method in class si.ijs.kt.clus.main.ClusStatManager
 
HeurOnly - Enum constant in enum class si.ijs.kt.clus.main.settings.section.SettingsRules.CoveringMethod
No covering, only heuristic
HIER_CLASS_AND_REG - Enum constant in enum class si.ijs.kt.clus.main.ClusStatManager.Mode
 
HIER_DEBUG - Static variable in class si.ijs.kt.clus.Clus
 
HIERACHICAL_MULTI_LABEL_CLASSIFICATION - Enum constant in enum class si.ijs.kt.clus.main.ClusStatManager.TargetType
 
HIERARCHICAL - Enum constant in enum class si.ijs.kt.clus.main.ClusStatManager.Mode
 
HIERARCHICAL_MTR - Enum constant in enum class si.ijs.kt.clus.main.ClusStatManager.Mode
 
HierarchicalMultiLabelDistance - Class in si.ijs.kt.clus.distance.primitive.relief
 
HierarchicalMultiLabelDistance() - Constructor for class si.ijs.kt.clus.distance.primitive.relief.HierarchicalMultiLabelDistance
 
Hierarchy - Enum constant in enum class si.ijs.kt.clus.Clus.DebugType
 
HIERARCY_SEPARATOR - Static variable in class si.ijs.kt.clus.ext.hierarchical.ClassesValue
 
HierBasicDistance - Interface in si.ijs.kt.clus.distance.hierarchies
 
HierClassTresholdPruner - Class in si.ijs.kt.clus.ext.hierarchical
 
HierClassTresholdPruner(double[]) - Constructor for class si.ijs.kt.clus.ext.hierarchical.HierClassTresholdPruner
 
HierClassWiseAccuracy - Class in si.ijs.kt.clus.error.hmlc
 
HierClassWiseAccuracy(ClusErrorList, ClassHierarchy) - Constructor for class si.ijs.kt.clus.error.hmlc.HierClassWiseAccuracy
 
HierErrorMeasures - Class in si.ijs.kt.clus.error.hmlc
 
HierErrorMeasures(ClusErrorList, ClassHierarchy, double[], SettingsHMLC.HierarchyMeasures, boolean, boolean) - Constructor for class si.ijs.kt.clus.error.hmlc.HierErrorMeasures
 
HierIO - Class in si.ijs.kt.clus.ext.hierarchical
 
HierIO() - Constructor for class si.ijs.kt.clus.ext.hierarchical.HierIO
 
HierJaccardDistance - Class in si.ijs.kt.clus.distance.hierarchies
 
HierJaccardDistance(ClassesAttrType) - Constructor for class si.ijs.kt.clus.distance.hierarchies.HierJaccardDistance
 
HierLevelAccuracy - Class in si.ijs.kt.clus.error.hmlc
 
HierLevelAccuracy(ClusErrorList, ClassHierarchy) - Constructor for class si.ijs.kt.clus.error.hmlc.HierLevelAccuracy
 
HierLevelDistance - Class in si.ijs.kt.clus.distance.hierarchies
 
HierLevelDistance() - Constructor for class si.ijs.kt.clus.distance.hierarchies.HierLevelDistance
 
HierMatrixOutput - Class in si.ijs.kt.clus.ext.hierarchical
 
HierMatrixOutput() - Constructor for class si.ijs.kt.clus.ext.hierarchical.HierMatrixOutput
 
HierModelPostProc - Class in si.ijs.kt.clus.ext.hierarchical
 
HierModelPostProc() - Constructor for class si.ijs.kt.clus.ext.hierarchical.HierModelPostProc
 
HierNodeWeights - Class in si.ijs.kt.clus.ext.hierarchical
 
HierNodeWeights() - Constructor for class si.ijs.kt.clus.ext.hierarchical.HierNodeWeights
 
HierPrologOutput - Class in si.ijs.kt.clus.ext.hierarchical
 
HierPrologOutput() - Constructor for class si.ijs.kt.clus.ext.hierarchical.HierPrologOutput
 
HierRemoveInsigClasses - Class in si.ijs.kt.clus.ext.hierarchical
 
HierRemoveInsigClasses(ClusData, PruneTree, boolean, ClassHierarchy) - Constructor for class si.ijs.kt.clus.ext.hierarchical.HierRemoveInsigClasses
 
HierRMSError - Class in si.ijs.kt.clus.error.hmlc
 
HierRMSError(ClusErrorList, ClusAttributeWeights, boolean, boolean, boolean, ClassHierarchy) - Constructor for class si.ijs.kt.clus.error.hmlc.HierRMSError
 
HierRMSError(ClusErrorList, ClusAttributeWeights, boolean, boolean, ClassHierarchy) - Constructor for class si.ijs.kt.clus.error.hmlc.HierRMSError
 
HierSingleLabelStat - Class in si.ijs.kt.clus.statistic
 
HierSingleLabelStat(Settings, ClassHierarchy) - Constructor for class si.ijs.kt.clus.statistic.HierSingleLabelStat
 
HierSingleLabelStat(Settings, ClassHierarchy, boolean) - Constructor for class si.ijs.kt.clus.statistic.HierSingleLabelStat
 
HierSumPairwiseDistancesStat - Class in si.ijs.kt.clus.statistic
 
HierSumPairwiseDistancesStat(Settings, ClassHierarchy, ClusDistance) - Constructor for class si.ijs.kt.clus.statistic.HierSumPairwiseDistancesStat
 
HierThresholdCalibration - Interface in si.ijs.kt.clus.ext.hierarchical.thresholdcalibration
 
HierWeightSPath - Class in si.ijs.kt.clus.distance.hierarchies
 
HierWeightSPath(int, double) - Constructor for class si.ijs.kt.clus.distance.hierarchies.HierWeightSPath
 
HierWPenalty - Class in si.ijs.kt.clus.distance.hierarchies
 
HierWPenalty(int, double) - Constructor for class si.ijs.kt.clus.distance.hierarchies.HierWPenalty
 
hMax - Variable in class si.ijs.kt.clus.algo.split.CurrentBestTestAndHeuristic
 
hMaxB - Variable in class si.ijs.kt.clus.algo.split.CurrentBestTestAndHeuristic
 
hMaxB - Variable in class si.ijs.kt.clus.algo.split.FindBestTest
 
HMCAverageNodeWiseModels - Class in si.ijs.kt.clus.addon.hmc.HMCAverageSingleClass
 
HMCAverageNodeWiseModels(HMCAverageSingleClass, double[][][]) - Constructor for class si.ijs.kt.clus.addon.hmc.HMCAverageSingleClass.HMCAverageNodeWiseModels
 
HMCAverageSingleClass - Class in si.ijs.kt.clus.addon.hmc.HMCAverageSingleClass
 
HMCAverageSingleClass() - Constructor for class si.ijs.kt.clus.addon.hmc.HMCAverageSingleClass.HMCAverageSingleClass
 
HMCAverageTreeModel - Class in si.ijs.kt.clus.addon.hmc.HMCAverageSingleClass
 
HMCAverageTreeModel(ClusStatistic, double[][][], int, int) - Constructor for class si.ijs.kt.clus.addon.hmc.HMCAverageSingleClass.HMCAverageTreeModel
 
HMCConvertDAGData - Class in si.ijs.kt.clus.addon.hmc.HMCConvertDAGData
 
HMCConvertDAGData() - Constructor for class si.ijs.kt.clus.addon.hmc.HMCConvertDAGData.HMCConvertDAGData
 
HMCConvertToSC - Class in si.ijs.kt.clus.addon.hmc.HMCConvertToSC
 
HMCConvertToSC() - Constructor for class si.ijs.kt.clus.addon.hmc.HMCConvertToSC.HMCConvertToSC
 
HMCNodeWiseModels - Class in si.ijs.kt.clus.addon.hmc.HMCNodeWiseModels.hmcnwmodels
 
HMCNodeWiseModels() - Constructor for class si.ijs.kt.clus.addon.hmc.HMCNodeWiseModels.hmcnwmodels.HMCNodeWiseModels
 
hMin - Variable in class si.ijs.kt.clus.algo.split.CurrentBestTestAndHeuristic
 
hMinB - Variable in class si.ijs.kt.clus.algo.split.CurrentBestTestAndHeuristic
 
hMinB - Variable in class si.ijs.kt.clus.algo.split.FindBestTest
 
HMTR_ERROR_POSTFIX - Static variable in class si.ijs.kt.clus.main.settings.section.SettingsHMTR
 
howMuchWeightChanges(int) - Method in class si.ijs.kt.clus.util.tools.optimization.gd.GDProblem
Compute the change of target weight because of the gradient
Huber - Enum constant in enum class si.ijs.kt.clus.main.settings.section.SettingsRules.OptimizationLossFunction
Optimization Loss function type.

I

ICVPairwiseDistancesError - Class in si.ijs.kt.clus.error
 
ICVPairwiseDistancesError(ClusErrorList, ClusDistance) - Constructor for class si.ijs.kt.clus.error.ICVPairwiseDistancesError
 
ICVPairwiseDistancesError(ClusErrorList, ClusDistance, String) - Constructor for class si.ijs.kt.clus.error.ICVPairwiseDistancesError
 
IDeepCloner - Interface in si.ijs.kt.clus.util.cloner
used by fast cloners to deep clone objects
IDumpCloned - Interface in si.ijs.kt.clus.util.cloner
 
IFastCloner - Interface in si.ijs.kt.clus.util.cloner
allows a custom cloner to be created for a specific class.
IfBetter - Enum constant in enum class si.ijs.kt.clus.main.settings.section.SettingsRules.RuleAddingMethod
Only adds a rule to the rule set if it improves the rule set performance
IfBetterBeam - Enum constant in enum class si.ijs.kt.clus.main.settings.section.SettingsRules.RuleAddingMethod
Only adds a rule to the rule set if it improves the rule set performance.
IFreezable - Interface in si.ijs.kt.clus.util.cloner
 
Ignore - Enum constant in enum class si.ijs.kt.clus.main.settings.section.SettingsTree.MissingClusteringAttributeHandlingType
 
IInstantiationStrategy - Interface in si.ijs.kt.clus.util.cloner
 
ILEVELC - Enum constant in enum class si.ijs.kt.clus.main.ClusStatManager.Mode
 
ILevelCCannotLink - Static variable in class si.ijs.kt.clus.ext.ilevelc.ILevelConstraint
 
ILevelCComponent() - Constructor for class si.ijs.kt.clus.addon.ILevelC.ilevelc.ILevelCGUI.ILevelCComponent
 
ILevelCGUI - Class in si.ijs.kt.clus.addon.ILevelC.ilevelc
 
ILevelCGUI() - Constructor for class si.ijs.kt.clus.addon.ILevelC.ilevelc.ILevelCGUI
 
ILevelCGUI.ClosureListener - Class in si.ijs.kt.clus.addon.ILevelC.ilevelc
 
ILevelCGUI.ILevelCComponent - Class in si.ijs.kt.clus.addon.ILevelC.ilevelc
 
ILevelCGUI.ILevelMouseListener - Class in si.ijs.kt.clus.addon.ILevelC.ilevelc
 
ILevelCGUI.LoadListener - Class in si.ijs.kt.clus.addon.ILevelC.ilevelc
 
ILevelCGUI.SaveListener - Class in si.ijs.kt.clus.addon.ILevelC.ilevelc
 
ILevelCHeurStat - Class in si.ijs.kt.clus.ext.ilevelc
 
ILevelCHeurStat(Settings, ILevelCStatistic, int) - Constructor for class si.ijs.kt.clus.ext.ilevelc.ILevelCHeurStat
 
iLevelCInduce(ClusNode) - Method in class si.ijs.kt.clus.ext.ilevelc.ILevelCInduce
 
ILevelCInduce - Class in si.ijs.kt.clus.ext.ilevelc
 
ILevelCInduce(ClusSchema, Settings) - Constructor for class si.ijs.kt.clus.ext.ilevelc.ILevelCInduce
 
ILevelCMustLink - Static variable in class si.ijs.kt.clus.ext.ilevelc.ILevelConstraint
 
ILevelConstraint - Class in si.ijs.kt.clus.ext.ilevelc
 
ILevelConstraint(DataTuple, DataTuple, int) - Constructor for class si.ijs.kt.clus.ext.ilevelc.ILevelConstraint
 
ILevelCRandIndex - Class in si.ijs.kt.clus.ext.ilevelc
 
ILevelCRandIndex(ClusErrorList, NominalAttrType) - Constructor for class si.ijs.kt.clus.ext.ilevelc.ILevelCRandIndex
 
ILevelCStatistic - Class in si.ijs.kt.clus.ext.ilevelc
 
ILevelCStatistic(Settings, NumericAttrType[]) - Constructor for class si.ijs.kt.clus.ext.ilevelc.ILevelCStatistic
 
ILevelCUtil - Class in si.ijs.kt.clus.ext.ilevelc
 
ILevelCUtil() - Constructor for class si.ijs.kt.clus.ext.ilevelc.ILevelCUtil
 
ILevelMouseListener() - Constructor for class si.ijs.kt.clus.addon.ILevelC.ilevelc.ILevelCGUI.ILevelMouseListener
 
Immutable - Annotation Interface in si.ijs.kt.clus.util.cloner
marks the specific class as immutable and the cloner avoids cloning it
ImplicitLinearTerms - Class in si.ijs.kt.clus.util.tools.optimization
Class for including all the linear terms implicitly in the weight optimization procedure.
ImplicitLinearTerms(RowData, ClusStatManager) - Constructor for class si.ijs.kt.clus.util.tools.optimization.ImplicitLinearTerms
Create implicit linear terms
impute(ClusRun) - Static method in class si.ijs.kt.clus.ext.imputation.MissingTargetImputation
 
impute(ClusRun, HashMap<Integer, ArrayList<Integer>>) - Static method in class si.ijs.kt.clus.ext.imputation.MissingTargetImputation
 
Impute - Enum constant in enum class si.ijs.kt.clus.main.settings.section.SettingsRelief.MissingTargetHandling
 
imputeMissingTargetValues() - Method in class si.ijs.kt.clus.main.settings.section.SettingsSSL
 
IN_HEURISTIC - Static variable in class si.ijs.kt.clus.statistic.CombStat
 
IN_OUTPUT - Static variable in class si.ijs.kt.clus.statistic.CombStat
 
inc() - Method in class si.ijs.kt.clus.util.jeans.util.compound.DoubleBooleanCount
 
inc(DoubleBooleanCount) - Method in class si.ijs.kt.clus.util.jeans.util.compound.DoubleBooleanCount
 
inc_itemsetcpt() - Static method in class si.ijs.kt.clus.main.Global
 
inc_treecpt() - Static method in class si.ijs.kt.clus.main.Global
 
incCTree() - Method in class si.ijs.kt.clus.ext.exhaustivesearch.ClusExhaustiveDFSearch
 
includesHierarchical() - Method in enum class si.ijs.kt.clus.main.ClusStatManager.Mode
 
includeZeroFreqClasses(int) - Method in class si.ijs.kt.clus.error.hmlc.HierErrorMeasures
 
incNbMissing() - Method in class si.ijs.kt.clus.data.type.ClusAttrType
 
incorrectCoverAcrossAllRules() - Method in class si.ijs.kt.clus.algo.rules.ClusRuleSet
 
incrementCoverageOpt(int[]) - Method in class si.ijs.kt.clus.ext.ensemble.ros.ClusEnsembleROSInfo
Used when ensembles run in optimized mode
incrementPredictions(double[][], double[][]) - Static method in class si.ijs.kt.clus.ext.ensemble.ClusEnsembleInduceOptimization
Returns the componentwise sum of the current sums and another predictions
incrementPredictions(double[][], double[][], int) - Method in class si.ijs.kt.clus.ext.ensemble.ClusEnsembleInduceOptimization
 
incrementPredictions(double[], double[], double) - Static method in class si.ijs.kt.clus.ext.ensemble.ClusEnsembleInduceOptimization
The average predictions avg_predictions of nb_models - 1, and the predictions predictions of one additional model are combined into the average predictions of all nb_models.
incrementProximities(DataTuple) - Method in class si.ijs.kt.clus.algo.tdidt.ClusNode
Store indices of tuples in leaf nodes.
incValue() - Method in class si.ijs.kt.clus.util.jeans.util.compound.IntObject
 
Index - Enum constant in enum class si.ijs.kt.clus.data.type.ClusAttrType.AttributeType
 
Index - Enum constant in enum class si.ijs.kt.clus.main.settings.section.SettingsOutput.ShowInfo
 
IndexAttrType - Class in si.ijs.kt.clus.data.type.primitive
 
IndexAttrType(String) - Constructor for class si.ijs.kt.clus.data.type.primitive.IndexAttrType
 
IndexAttrType(String, int, int) - Constructor for class si.ijs.kt.clus.data.type.primitive.IndexAttrType
 
IndexAttrType.MyReader - Class in si.ijs.kt.clus.data.type.primitive
 
IndexedItem - Class in si.ijs.kt.clus.util.jeans.util.compound
 
IndexedItem() - Constructor for class si.ijs.kt.clus.util.jeans.util.compound.IndexedItem
 
IndexMergeSorter - Class in si.ijs.kt.clus.util.tools.optimization
Merge sort which returns the indexes of the target array, not the target array.
IndexMergeSorter() - Constructor for class si.ijs.kt.clus.util.tools.optimization.IndexMergeSorter
 
indexOf(MyNode) - Method in class si.ijs.kt.clus.ext.optiontree.MyNode
 
indexOf(Node) - Method in class si.ijs.kt.clus.util.jeans.tree.MyNode
 
indexPoints() - Method in class si.ijs.kt.clus.addon.ILevelC.ilevelc.ILevelCGUI.ILevelCComponent
 
indexPoints() - Method in class si.ijs.kt.clus.ext.ilevelc.DerivedConstraintsComputer
 
IndiceValuePair - Class in si.ijs.kt.clus.ext.semisupervised.utils
Structure that contains one int and one double
IndiceValuePair(int, double) - Constructor for class si.ijs.kt.clus.ext.semisupervised.utils.IndiceValuePair
 
induce(ArrayList<ClusNode>, ArrayList<RowData>, ArrayList<RowData>, int) - Method in class si.ijs.kt.clus.ext.bestfirst.BestFirstInduce
 
induce(ClusNode, RowData, Object[], ClusRandomNonstatic) - Method in class si.ijs.kt.clus.algo.tdidt.DepthFirstInduceSparse
 
induce(ClusNode, RowData, ClusRandomNonstatic) - Method in class si.ijs.kt.clus.algo.tdidt.DepthFirstInduce
 
induce(ClusNode, RowData, ClusRandomNonstatic) - Method in class si.ijs.kt.clus.algo.tdidt.DepthFirstInduceSparse
 
induce(RowData, ArrayList) - Method in class si.ijs.kt.clus.ext.ilevelc.COPKMeans
 
induce(RowData, RowData, ArrayList, int) - Method in class si.ijs.kt.clus.ext.ilevelc.MPCKMeansWrapper
 
induce(ClusRun) - Method in class si.ijs.kt.clus.algo.rules.ClusRuleConstraintInduce
 
induce(ClusRun) - Method in class si.ijs.kt.clus.algo.rules.ClusRuleInduce
Calls the appropriate rule learning method (e.g.
induce(ClusRun, ClusInductionAlgorithmType) - Method in class si.ijs.kt.clus.Clus
Train the model for given algorithm type.
induce(ClusRun, MultiScore) - Method in class si.ijs.kt.clus.ext.optxval.OptXValInduce
 
induceAll(ClusRun) - Method in class si.ijs.kt.clus.algo.ClusInductionAlgorithm
 
induceAll(ClusRun) - Method in class si.ijs.kt.clus.algo.ClusInductionAlgorithmType
Calls the induce function for each of the learning algorithms of this TYPE.
induceAll(ClusRun) - Method in class si.ijs.kt.clus.algo.rules.ClusRuleConstraintInduce
 
induceAll(ClusRun) - Method in class si.ijs.kt.clus.algo.rules.ClusRuleFromTreeInduce
Induces the rule models.
induceAll(ClusRun) - Method in class si.ijs.kt.clus.algo.rules.ClusRuleInduce
 
induceAll(ClusRun) - Method in class si.ijs.kt.clus.algo.rules.probabilistic.ClusRuleProbabilisticRuleSetInduce
 
induceAll(ClusRun) - Method in class si.ijs.kt.clus.algo.rules.tune.FIREROSTune
 
induceAll(ClusRun) - Method in class si.ijs.kt.clus.algo.tdidt.ClusSITDecisionTree
 
induceAll(ClusRun) - Method in class si.ijs.kt.clus.algo.tdidt.tune.CDTTuneFTest
 
induceAll(ClusRun) - Method in class si.ijs.kt.clus.algo.tdidt.tune.CDTuneSizeConstrPruning
 
induceAll(ClusRun) - Method in class si.ijs.kt.clus.ext.beamsearch.ClusBeamInduce
 
induceAll(ClusRun) - Method in class si.ijs.kt.clus.ext.ensemble.ClusBoostingInduce
 
induceAll(ClusRun) - Method in class si.ijs.kt.clus.ext.ensemble.ClusEnsembleInduce
Train a decision tree ensemble with an algorithm given in settings
induceAll(ClusRun) - Method in class si.ijs.kt.clus.ext.exhaustivesearch.ClusExhaustiveInduce
 
induceAll(ClusRun) - Method in class si.ijs.kt.clus.ext.optiontree.DepthFirstInduceWithOptions
 
induceBagging(ClusRun) - Method in class si.ijs.kt.clus.ext.ensemble.ClusEnsembleInduce
 
induceBaggingSubspaces(ClusRun) - Method in class si.ijs.kt.clus.ext.ensemble.ClusEnsembleInduce
 
induceDefault(ClusRun) - Static method in class si.ijs.kt.clus.algo.tdidt.ClusDecisionTree
 
induceDefaultModel(ClusRun) - Static method in class si.ijs.kt.clus.algo.kNN.KnnClassifier
Induced default model - prediction to majority class.
induceOneBag(ClusRun, int, int, OOBSelection, TupleIterator, TupleIterator, BagSelection, ClusRandomNonstatic, ClusStatManager) - Method in class si.ijs.kt.clus.ext.ensemble.ClusEnsembleInduce
 
InduceOneBagCallable - Class in si.ijs.kt.clus.ext.ensemble.callable
 
InduceOneBagCallable(ClusEnsembleInduce, ClusRun, int, int, OOBSelection, TupleIterator, TupleIterator, BagSelection, ClusRandomNonstatic, ClusStatManager) - Constructor for class si.ijs.kt.clus.ext.ensemble.callable.InduceOneBagCallable
 
inducePre(ClusNode, RowData) - Method in class si.ijs.kt.clus.ext.bestfirst.BestFirstInduce
 
induceRandomForest(ClusNode, RowData, ClusRandomNonstatic) - Method in class si.ijs.kt.clus.algo.tdidt.DepthFirstInduceSparse
 
induceRandomForestRecursive(ClusNode, RowData, ClusRandomNonstatic) - Method in class si.ijs.kt.clus.algo.tdidt.DepthFirstInduceSparse
 
induceRandomForestRecursive2(ClusNode, RowData, Object[], ClusRandomNonstatic) - Method in class si.ijs.kt.clus.algo.tdidt.DepthFirstInduceSparse
 
induceRandomly(ClusRun) - Method in class si.ijs.kt.clus.algo.rules.ClusRuleConstraintInduce
Method that induces a specified number of random rules.
induceRandomly(ClusRun) - Method in class si.ijs.kt.clus.algo.rules.ClusRuleInduce
Method that induces a specified number of random rules.
induceRandomSubspaces(ClusRun) - Method in class si.ijs.kt.clus.ext.ensemble.ClusEnsembleInduce
 
induceRecursive(ClusNode, RowData) - Method in class si.ijs.kt.clus.algo.tdidt.ConstraintDFInduce
 
induceRForestNoBootstrap(ClusRun) - Method in class si.ijs.kt.clus.ext.ensemble.ClusEnsembleInduce
 
induceSingle(ClusRun) - Method in class si.ijs.kt.clus.algo.ClusInductionAlgorithmType
 
induceSingle(ClusRun) - Method in class si.ijs.kt.clus.algo.tdidt.tune.CDTuneSizeConstrPruning
 
induceSingleUnpruned(RowData) - Method in class si.ijs.kt.clus.ext.bestfirst.BestFirstInduce
 
induceSingleUnpruned(RowData) - Method in class si.ijs.kt.clus.ext.featureRanking.relief.ReliefInduce
 
induceSingleUnpruned(RowData, ClusRandomNonstatic) - Method in class si.ijs.kt.clus.algo.tdidt.DepthFirstInduce
 
induceSingleUnpruned(ClusRun) - Method in class si.ijs.kt.clus.algo.ClusInductionAlgorithm
 
induceSingleUnpruned(ClusRun) - Method in class si.ijs.kt.clus.algo.ClusInductionAlgorithmType
 
induceSingleUnpruned(ClusRun) - Method in class si.ijs.kt.clus.algo.rules.ClusRuleConstraintInduce
 
induceSingleUnpruned(ClusRun) - Method in class si.ijs.kt.clus.algo.rules.ClusRuleFromTreeInduce
Induces rules from ensemble tree, similar to ClusRuleInduce.induce
induceSingleUnpruned(ClusRun) - Method in class si.ijs.kt.clus.algo.rules.ClusRuleInduce
 
induceSingleUnpruned(ClusRun) - Method in class si.ijs.kt.clus.algo.rules.probabilistic.ClusRuleProbabilisticRuleSetInduce
 
induceSingleUnpruned(ClusRun) - Method in class si.ijs.kt.clus.algo.tdidt.ConstraintDFInduce
 
induceSingleUnpruned(ClusRun) - Method in class si.ijs.kt.clus.algo.tdidt.DepthFirstInduce
 
induceSingleUnpruned(ClusRun) - Method in class si.ijs.kt.clus.ext.beamsearch.ClusBeamInduce
 
induceSingleUnpruned(ClusRun) - Method in class si.ijs.kt.clus.ext.bestfirst.BestFirstInduce
 
induceSingleUnpruned(ClusRun) - Method in class si.ijs.kt.clus.ext.ensemble.ClusBoostingInduce
 
induceSingleUnpruned(ClusRun) - Method in class si.ijs.kt.clus.ext.ensemble.ClusEnsembleInduce
 
induceSingleUnpruned(ClusRun) - Method in class si.ijs.kt.clus.ext.exhaustivesearch.ClusExhaustiveInduce
 
induceSingleUnpruned(ClusRun) - Method in class si.ijs.kt.clus.ext.featureRanking.relief.ReliefInduce
 
induceSingleUnpruned(ClusRun) - Method in class si.ijs.kt.clus.ext.ilevelc.ILevelCInduce
 
induceSingleUnpruned(ClusRun) - Method in class si.ijs.kt.clus.ext.optiontree.DepthFirstInduceWithOptions
 
induceSingleUnpruned(ClusRun) - Method in class si.ijs.kt.clus.ext.optxval.OptXValInduce
 
induceSingleUnpruned(ClusRun) - Method in class si.ijs.kt.clus.ext.semisupervised.ClusSelfTrainingFTFInduce
 
induceSingleUnpruned(ClusRun) - Method in class si.ijs.kt.clus.ext.semisupervised.ClusSelfTrainingInduce
 
induceSingleUnpruned(ClusRun) - Method in class si.ijs.kt.clus.ext.semisupervised.ClusSemiSupervisedPCTs
 
induceSingleUnpruned(ClusRun, ClusRandomNonstatic) - Method in class si.ijs.kt.clus.algo.tdidt.DepthFirstInduce
 
induceSingleUnprunedBoosting(ClusRun) - Method in class si.ijs.kt.clus.ext.ensemble.ClusBoostingInduce
 
INFINITY - Static variable in class si.ijs.kt.clus.main.settings.SettingsBase
 
INFINITY_STRING - Static variable in class si.ijs.kt.clus.main.settings.SettingsBase
 
INFINITY_VALUE - Static variable in class si.ijs.kt.clus.main.settings.SettingsBase
 
info() - Static method in class si.ijs.kt.clus.util.ClusLogger
 
info(double) - Static method in class si.ijs.kt.clus.util.ClusLogger
 
info(String) - Static method in class si.ijs.kt.clus.util.ClusLogger
 
INIFile - Class in si.ijs.kt.clus.util.jeans.io.ini
 
INIFile() - Constructor for class si.ijs.kt.clus.util.jeans.io.ini.INIFile
 
INIFileArray - Class in si.ijs.kt.clus.util.jeans.io.ini
 
INIFileArray(String, double[]) - Constructor for class si.ijs.kt.clus.util.jeans.io.ini.INIFileArray
 
INIFileArray(String, int) - Constructor for class si.ijs.kt.clus.util.jeans.io.ini.INIFileArray
 
INIFileArray(String, int[]) - Constructor for class si.ijs.kt.clus.util.jeans.io.ini.INIFileArray
 
INIFileArray(String, String[]) - Constructor for class si.ijs.kt.clus.util.jeans.io.ini.INIFileArray
 
INIFileBool - Class in si.ijs.kt.clus.util.jeans.io.ini
 
INIFileBool(String) - Constructor for class si.ijs.kt.clus.util.jeans.io.ini.INIFileBool
 
INIFileBool(String, boolean) - Constructor for class si.ijs.kt.clus.util.jeans.io.ini.INIFileBool
 
INIFileBool(String, String) - Constructor for class si.ijs.kt.clus.util.jeans.io.ini.INIFileBool
 
INIFileDouble - Class in si.ijs.kt.clus.util.jeans.io.ini
 
INIFileDouble(String) - Constructor for class si.ijs.kt.clus.util.jeans.io.ini.INIFileDouble
 
INIFileDouble(String, double) - Constructor for class si.ijs.kt.clus.util.jeans.io.ini.INIFileDouble
 
INIFileDouble(String, String) - Constructor for class si.ijs.kt.clus.util.jeans.io.ini.INIFileDouble
 
INIFileEntry - Class in si.ijs.kt.clus.util.jeans.io.ini
 
INIFileEntry(String) - Constructor for class si.ijs.kt.clus.util.jeans.io.ini.INIFileEntry
 
INIFileEnum<T extends Enum<T>> - Class in si.ijs.kt.clus.util.jeans.io.ini
 
INIFileEnum(String, T) - Constructor for class si.ijs.kt.clus.util.jeans.io.ini.INIFileEnum
 
INIFileEnumList<T extends Enum<T>> - Class in si.ijs.kt.clus.util.jeans.io.ini
 
INIFileEnumList(String, List<T>, Class<T>) - Constructor for class si.ijs.kt.clus.util.jeans.io.ini.INIFileEnumList
 
INIFileEnumList(String, T) - Constructor for class si.ijs.kt.clus.util.jeans.io.ini.INIFileEnumList
 
INIFileInt - Class in si.ijs.kt.clus.util.jeans.io.ini
 
INIFileInt(String) - Constructor for class si.ijs.kt.clus.util.jeans.io.ini.INIFileInt
 
INIFileInt(String, int) - Constructor for class si.ijs.kt.clus.util.jeans.io.ini.INIFileInt
 
INIFileInt(String, String) - Constructor for class si.ijs.kt.clus.util.jeans.io.ini.INIFileInt
 
INIFileNode - Class in si.ijs.kt.clus.util.jeans.io.ini
 
INIFileNode(String) - Constructor for class si.ijs.kt.clus.util.jeans.io.ini.INIFileNode
 
INIFileNominal - Class in si.ijs.kt.clus.util.jeans.io.ini
Corresponds to a nominal settings file field.
INIFileNominal(String, String[]) - Constructor for class si.ijs.kt.clus.util.jeans.io.ini.INIFileNominal
 
INIFileNominal(String, String[], int) - Constructor for class si.ijs.kt.clus.util.jeans.io.ini.INIFileNominal
Constructor for INIFileNominal
INIFileNominal(String, String[], int[]) - Constructor for class si.ijs.kt.clus.util.jeans.io.ini.INIFileNominal
 
INIFileNominal(String, NominalType) - Constructor for class si.ijs.kt.clus.util.jeans.io.ini.INIFileNominal
 
INIFileNominal(String, NominalType, int) - Constructor for class si.ijs.kt.clus.util.jeans.io.ini.INIFileNominal
 
INIFileNominal(String, NominalType, int[]) - Constructor for class si.ijs.kt.clus.util.jeans.io.ini.INIFileNominal
 
INIFileNominalOrDoubleOrVector - Class in si.ijs.kt.clus.util.jeans.io.ini
 
INIFileNominalOrDoubleOrVector(String, String[]) - Constructor for class si.ijs.kt.clus.util.jeans.io.ini.INIFileNominalOrDoubleOrVector
 
INIFileNominalOrDoubleOrVector(String, NominalType) - Constructor for class si.ijs.kt.clus.util.jeans.io.ini.INIFileNominalOrDoubleOrVector
 
INIFileNominalOrIntOrVector - Class in si.ijs.kt.clus.util.jeans.io.ini
 
INIFileNominalOrIntOrVector(String, String[]) - Constructor for class si.ijs.kt.clus.util.jeans.io.ini.INIFileNominalOrIntOrVector
 
INIFileNominalOrIntOrVector(String, NominalType) - Constructor for class si.ijs.kt.clus.util.jeans.io.ini.INIFileNominalOrIntOrVector
 
INIFileSection - Class in si.ijs.kt.clus.util.jeans.io.ini
 
INIFileSection() - Constructor for class si.ijs.kt.clus.util.jeans.io.ini.INIFileSection
 
INIFileSection(String) - Constructor for class si.ijs.kt.clus.util.jeans.io.ini.INIFileSection
 
INIFileSectionGroup - Class in si.ijs.kt.clus.util.jeans.io.ini
 
INIFileSectionGroup(String) - Constructor for class si.ijs.kt.clus.util.jeans.io.ini.INIFileSectionGroup
 
INIFileString - Class in si.ijs.kt.clus.util.jeans.io.ini
 
INIFileString(String) - Constructor for class si.ijs.kt.clus.util.jeans.io.ini.INIFileString
 
INIFileString(String, String) - Constructor for class si.ijs.kt.clus.util.jeans.io.ini.INIFileString
 
INIFileStringOrDouble - Class in si.ijs.kt.clus.util.jeans.io.ini
 
INIFileStringOrDouble(String) - Constructor for class si.ijs.kt.clus.util.jeans.io.ini.INIFileStringOrDouble
 
INIFileStringOrDouble(String, String) - Constructor for class si.ijs.kt.clus.util.jeans.io.ini.INIFileStringOrDouble
 
INIFileStringOrInt - Class in si.ijs.kt.clus.util.jeans.io.ini
 
INIFileStringOrInt(String) - Constructor for class si.ijs.kt.clus.util.jeans.io.ini.INIFileStringOrInt
 
INIFileStringOrInt(String, String) - Constructor for class si.ijs.kt.clus.util.jeans.io.ini.INIFileStringOrInt
 
init() - Method in class si.ijs.kt.clus.data.rows.DiskTupleIterator
 
init() - Method in class si.ijs.kt.clus.data.rows.FileTupleIterator
 
init() - Method in class si.ijs.kt.clus.data.rows.MemoryTupleIterator
 
init() - Method in class si.ijs.kt.clus.data.rows.TupleIterator
 
init(int[]) - Method in class si.ijs.kt.clus.ext.optxval.OptXValNode
 
init(int[], NodeTest) - Method in class si.ijs.kt.clus.ext.optxval.OptXValSplit
 
init(RowData, Settings) - Method in class si.ijs.kt.clus.addon.sit.mtLearner.ClusLearner
 
init(RowData, Settings) - Method in interface si.ijs.kt.clus.addon.sit.mtLearner.MTLearner
Initialize the MTLearner
init(RowData, Settings) - Method in class si.ijs.kt.clus.addon.sit.mtLearner.MTLearnerImpl
 
initAllModelProcessors(int, ClusSchema) - Method in class si.ijs.kt.clus.model.ClusModelInfo
 
initBeamSearchHeuristic() - Method in class si.ijs.kt.clus.main.ClusStatManager
 
initBitwiseNominal() - Method in class si.ijs.kt.clus.data.type.BitwiseNominalAttrType
 
initClassListRecursiveDAG(ClassTerm, HashSet<String>) - Method in class si.ijs.kt.clus.ext.hierarchical.ClassHierarchy
 
initClassListRecursiveTree(ClassTerm) - Method in class si.ijs.kt.clus.ext.hierarchical.ClassHierarchy
 
initClusteringStat(ClusStatManager, RowData) - Method in class si.ijs.kt.clus.algo.tdidt.ClusNode
 
initClusteringStat(ClusStatManager, RowData) - Method in class si.ijs.kt.clus.ext.optiontree.MyNode
 
initClusteringStat(ClusStatManager, ClusStatistic, RowData) - Method in class si.ijs.kt.clus.algo.tdidt.ClusNode
 
initClusteringStat(ClusStatManager, ClusStatistic, RowData) - Method in class si.ijs.kt.clus.ext.optiontree.MyNode
 
initClusteringWeights() - Method in class si.ijs.kt.clus.main.ClusStatManager
 
initCoveredBitVectArray(int) - Method in class si.ijs.kt.clus.heuristic.rules.ClusRuleHeuristicDispersion
 
initDescriptiveAttributes() - Method in class si.ijs.kt.clus.data.ClusSchema
 
initDispersionWeights() - Method in class si.ijs.kt.clus.main.ClusStatManager
 
initEnsemblePredictionsWriter(int) - Method in class si.ijs.kt.clus.main.ClusModelInfoList
 
initEnsemblePredictionWriter(int) - Method in class si.ijs.kt.clus.model.ClusModelInfo
 
initExponentialDepthWeights(ClassHierarchy, SettingsHMLC.HierarchyWeight, double) - Method in class si.ijs.kt.clus.ext.hierarchical.HierNodeWeights
 
initExponentialDepthWeightsDAG(ClassHierarchy, SettingsHMLC.HierarchyWeight, double) - Method in class si.ijs.kt.clus.ext.hierarchical.HierNodeWeights
 
initExponentialDepthWeightsRec(ClassTerm, int, double) - Method in class si.ijs.kt.clus.ext.hierarchical.HierNodeWeights
 
initGDForNewRunWithSamePredictions() - Method in class si.ijs.kt.clus.util.tools.optimization.gd.GDAlgorithm
Initialize GD optimization for new run with same predictions and true values This can be used if some parameters change.
initGDForNewRunWithSamePredictions() - Method in class si.ijs.kt.clus.util.tools.optimization.gd.GDProblem
Initialize GD optimization for new run with same predictions and true values This can be used if some parameters change.
initHeuristic() - Method in class si.ijs.kt.clus.main.ClusStatManager
 
initHierarchical() - Method in class si.ijs.kt.clus.main.settings.section.SettingsHMLC
 
initHierarchySettings() - Method in class si.ijs.kt.clus.main.ClusStatManager
 
initialize() - Method in class si.ijs.kt.clus.addon.sit.Sit
Initialize: -load settings -create schema -read in data
initialize() - Method in class si.ijs.kt.clus.algo.ClusInductionAlgorithm
 
initialize() - Method in class si.ijs.kt.clus.algo.tdidt.DepthFirstInduce
 
initialize() - Method in class si.ijs.kt.clus.data.ClusSchema
 
initialize() - Method in class si.ijs.kt.clus.ext.bestfirst.BestFirstInduce
 
initialize() - Method in class si.ijs.kt.clus.ext.hierarchical.ClassHierarchy
 
initialize() - Method in class si.ijs.kt.clus.ext.optiontree.DepthFirstInduceWithOptions
 
initialize() - Method in class si.ijs.kt.clus.ext.semisupervised.ClusSelfTrainingFTFInduce
 
initialize() - Method in class si.ijs.kt.clus.ext.semisupervised.ClusSelfTrainingInduce
 
initialize() - Method in class si.ijs.kt.clus.ext.semisupervised.ClusSemiSupervisedPCTs
 
initialize(double[][], double[][]) - Static method in class si.ijs.kt.clus.algo.rules.RuleNormalization
Initializes the statistical information about the data.
initialize(int) - Method in class si.ijs.kt.clus.ext.optxval.OptXValInduce
 
initialize(int) - Static method in class si.ijs.kt.clus.util.ClusRandom
 
initialize(ClusSchema, Settings) - Method in class si.ijs.kt.clus.ext.semisupervised.ClusSelfTrainingFTFInduce
 
initialize(ClusSchema, Settings) - Method in class si.ijs.kt.clus.ext.semisupervised.ClusSelfTrainingInduce
 
initialize(ClusSchema, Settings) - Method in class si.ijs.kt.clus.ext.semisupervised.ClusSemiSupervisedPCTs
* Initialize parameters
initialize(ClusSchema, Settings, Clus) - Method in class si.ijs.kt.clus.ext.ensemble.ClusEnsembleInduce
 
initialize(RowData, ClusSchema, Settings, ClusInductionAlgorithmType) - Method in class si.ijs.kt.clus.Clus
 
initialize(ClusStatManager) - Method in class si.ijs.kt.clus.algo.split.NArySplit
 
initialize(ClusStatManager) - Method in class si.ijs.kt.clus.algo.split.NominalSplit
 
initialize(ClusStatManager) - Method in class si.ijs.kt.clus.algo.split.SubsetSplit
 
initialize(SettingsGeneral) - Static method in class si.ijs.kt.clus.util.ClusLogger
Initializes the logging for Clus.
initialize(Settings) - Method in class si.ijs.kt.clus.ext.hierarchicalmtr.ClusHMTRHierarchy
 
initialize(Settings) - Static method in class si.ijs.kt.clus.util.ClusRandom
 
initialize(ClusModel, ClusSchema) - Method in class si.ijs.kt.clus.algo.tdidt.processor.BasicExampleCollector
 
initialize(ClusModel, ClusSchema) - Method in class si.ijs.kt.clus.algo.tdidt.processor.NodeExampleCollector
 
initialize(ClusModel, ClusSchema) - Method in class si.ijs.kt.clus.algo.tdidt.processor.NodeIDWriter
 
initialize(ClusModel, ClusSchema) - Method in class si.ijs.kt.clus.model.processor.CalcStatisticProcessor
 
initialize(ClusModel, ClusSchema) - Method in class si.ijs.kt.clus.model.processor.ClusModelProcessor
 
initialize(ClusModel, ClusSchema) - Method in class si.ijs.kt.clus.model.processor.ModelProcessorCollection
 
initialize(CMDLineArgs) - Method in class si.ijs.kt.clus.Clus
Condensed version of clus.Clus.initialize(CMDLineArgs, ClusInductionAlgorithmType) that more or less prepares the dataset.
initialize(CMDLineArgs, boolean) - Method in class si.ijs.kt.clus.main.settings.Settings
 
initialize(CMDLineArgs, ClusInductionAlgorithmType) - Method in class si.ijs.kt.clus.Clus
 
initializeAddOn(String) - Method in class si.ijs.kt.clus.Clus
Easy to use initialization method to be used from inside add-on applications supporting Clus (e.g., applications converting data)
initializeAll(ClusSchema) - Method in class si.ijs.kt.clus.model.processor.ClusModelProcessor
 
initializeAll(ClusSchema) - Method in class si.ijs.kt.clus.model.processor.ModelProcessorCollection
 
initializeAll(ClusSchema) - Method in class si.ijs.kt.clus.model.processor.PredictionWriter
 
initializeAttributes(ClusAttrType[], int) - Method in class si.ijs.kt.clus.ext.featureRanking.ClusFeatureRanking
 
initializeAttributes(ClusAttrType[], HashMap<SettingsEnsemble.EnsembleRanking, Integer>) - Method in class si.ijs.kt.clus.ext.featureRanking.ensemble.ClusEnsembleFeatureRankings
 
initializeAttributeWeights(ClusData) - Method in class si.ijs.kt.clus.Clus
 
initializeBeam(ClusRun) - Method in class si.ijs.kt.clus.ext.beamsearch.ClusBeamSearch
 
initializeBeam(ClusRun) - Method in class si.ijs.kt.clus.ext.beamsearch.ClusFastBeamSearch
 
initializeBeamExhaustive(ClusRun) - Method in class si.ijs.kt.clus.ext.exhaustivesearch.ClusExhaustiveSearch
 
initializeBeforeLoadingData() - Method in class si.ijs.kt.clus.data.type.ClusAttrType
 
initializeBeforeLoadingData() - Method in class si.ijs.kt.clus.data.type.hierarchies.ClassesAttrType
 
initializeClass(RowData, ClusStatManager) - Static method in class si.ijs.kt.clus.algo.rules.ClusRuleLinearTerm
Initializes class values for all linear terms.
initializeConstraint(ClusRun) - Method in class si.ijs.kt.clus.ext.beamsearch.ClusBeamSyntacticConstraint
 
initializeExamples(ClusAttrType[], RowData) - Method in class si.ijs.kt.clus.algo.tdidt.DepthFirstInduceSparse
 
initializeFolds() - Method in class si.ijs.kt.clus.ext.optxval.OptXValGroup
 
initializeFrom(ClusSchema) - Method in class si.ijs.kt.clus.data.ClusSchema
 
initializeFrom(ClusAttrType) - Method in class si.ijs.kt.clus.data.type.ClusAttrType
 
initializeFrom(ClusAttrType) - Method in class si.ijs.kt.clus.data.type.hierarchies.ClassesAttrType
 
initializeFromBits(boolean[]) - Method in class si.ijs.kt.clus.util.jeans.util.IntervalCollection
 
initializeFTable(double, int) - Static method in class si.ijs.kt.clus.util.FTest
 
initializeHeuristic() - Method in class si.ijs.kt.clus.algo.ClusInductionAlgorithm
 
initializeHeuristic() - Method in class si.ijs.kt.clus.ext.beamsearch.ClusBeamInduce
 
initializeHeuristic() - Method in class si.ijs.kt.clus.ext.beamsearch.ClusBeamSearch
 
initializeHeuristic() - Method in class si.ijs.kt.clus.ext.exhaustivesearch.ClusExhaustiveInduce
 
initializeHeuristic() - Method in class si.ijs.kt.clus.ext.exhaustivesearch.ClusExhaustiveSearch
 
initializeHeuristic() - Method in class si.ijs.kt.clus.ext.semisupervised.ClusSelfTrainingFTFInduce
 
initializeHeuristic() - Method in class si.ijs.kt.clus.ext.semisupervised.ClusSelfTrainingInduce
 
initializeLogPMatrix(int) - Method in class si.ijs.kt.clus.heuristic.EncodingCost
 
INITIALIZEPARTIALSUM - Static variable in class si.ijs.kt.clus.statistic.ClassificationStat
 
INITIALIZEPARTIALSUM - Static variable in class si.ijs.kt.clus.statistic.ClusStatistic
 
INITIALIZEPARTIALSUM - Static variable in class si.ijs.kt.clus.statistic.WHTDStatistic
 
initializeProximities(DataTuple) - Method in class si.ijs.kt.clus.ext.ensemble.ClusForest
Store indices of tuples in leaf nodes.
initializeSettings(Settings) - Method in class si.ijs.kt.clus.data.ClusSchema
 
initializeSum() - Method in class si.ijs.kt.clus.statistic.ClassificationStat
 
initializeSum() - Method in class si.ijs.kt.clus.statistic.ClusStatistic
 
initializeSum() - Method in class si.ijs.kt.clus.statistic.RegressionStat
 
initializeSum() - Method in class si.ijs.kt.clus.statistic.WHTDStatistic
 
initializeSummary(ClusInductionAlgorithmType) - Method in class si.ijs.kt.clus.Clus
 
initializeSuperFields(ClusReliefFeatureRanking, int) - Method in class si.ijs.kt.clus.ext.featureRanking.relief.statistics.Statistics
 
initializeTestErrors(ClusNode, ClusError) - Static method in class si.ijs.kt.clus.pruning.TreeErrorComputer
 
initializeTestErrorsData(ClusNode, RowData, ClusError) - Static method in class si.ijs.kt.clus.pruning.TreeErrorComputer
 
initLOOXVal() - Method in interface si.ijs.kt.clus.addon.sit.mtLearner.MTLearner
 
initLOOXVal() - Method in class si.ijs.kt.clus.addon.sit.mtLearner.MTLearnerImpl
 
initMeans(int) - Static method in class si.ijs.kt.clus.util.tools.optimization.OptimizationProblem
Initializes means with global means, this is not always done, sometimes mean = 0
initModelInfo(int) - Method in class si.ijs.kt.clus.main.ClusModelInfoList
************************************************************************* Adding models to it
initModelInfo(int, String) - Method in class si.ijs.kt.clus.main.ClusModelInfoList
Analogue of intiModelInfo(int i).
initModelInfo(ClusModelInfo) - Method in class si.ijs.kt.clus.main.ClusModelInfoList
 
initModelProcessors(int, ClusSchema) - Method in class si.ijs.kt.clus.main.ClusModelInfoList
 
initModelProcessors(int, ClusSchema) - Method in class si.ijs.kt.clus.model.ClusModelInfo
 
initModelRecursive(ClusNode, RowData) - Method in class si.ijs.kt.clus.ext.beamsearch.ClusFastBeamSearch
 
initNamedValues() - Method in class si.ijs.kt.clus.main.settings.section.SettingsBeamSearch
 
initNamedValues() - Method in class si.ijs.kt.clus.main.settings.section.SettingsConstraints
 
initNamedValues() - Method in class si.ijs.kt.clus.main.settings.section.SettingsKNN
 
initNamedValues() - Method in class si.ijs.kt.clus.main.settings.section.SettingsTree
 
initNamedValues() - Method in class si.ijs.kt.clus.main.settings.SettingsBase
Method should handle initialization of named values.
initNormalizationWeights(ClusAttributeWeights, boolean[]) - Method in class si.ijs.kt.clus.ext.structuredTypes.SetStatistic
 
initNormalizationWeights(ClusAttributeWeights, boolean[]) - Method in class si.ijs.kt.clus.ext.structuredTypes.TupleStatistic
 
initNormalizationWeights(ClusAttributeWeights, boolean[]) - Method in class si.ijs.kt.clus.ext.timeseries.TimeSeriesStat
 
initNormalizationWeights(ClusAttributeWeights, boolean[]) - Method in class si.ijs.kt.clus.statistic.ClassificationStat
 
initNormalizationWeights(ClusAttributeWeights, boolean[]) - Method in class si.ijs.kt.clus.statistic.RegressionStatBase
 
initNormalizationWeights(ClusStatistic, ClusData) - Method in class si.ijs.kt.clus.main.ClusStatManager
Initializes normalization weights to m_NormalizationWeights variable
initNormFactors(int, Settings) - Static method in class si.ijs.kt.clus.util.tools.optimization.OptimizationProblem
Initializes norm factors based on precomputed std dev values.
initNoWeights(ClassHierarchy) - Method in class si.ijs.kt.clus.ext.hierarchical.HierNodeWeights
 
initPredictions(ClusStatistic, ClusEnsembleROSInfo) - Method in class si.ijs.kt.clus.ext.ensemble.ClusEnsembleInduceOptClassification
 
initPredictions(ClusStatistic, ClusEnsembleROSInfo) - Method in class si.ijs.kt.clus.ext.ensemble.ClusEnsembleInduceOptimization
 
initPredictions(ClusStatistic, ClusEnsembleROSInfo) - Method in class si.ijs.kt.clus.ext.ensemble.ClusEnsembleInduceOptRegHMLC
 
initPredictorVsTrueValuesCovariances() - Method in class si.ijs.kt.clus.util.tools.optimization.gd.GDProblem
Compute covariances between predictors and true values.
initRuleHeuristic() - Method in class si.ijs.kt.clus.main.ClusStatManager
 
initRuleSettings() - Method in class si.ijs.kt.clus.main.ClusStatManager
Initializes/checks/overrides some inter-dependent settings for rule induction.
initSchema(ClusSchema) - Method in interface si.ijs.kt.clus.data.ClusSchemaInitializer
 
initSelector(CurrentBestTestAndHeuristic) - Method in class si.ijs.kt.clus.ext.beamsearch.ClusBeamSearch
 
initSelector(CurrentBestTestAndHeuristic) - Method in class si.ijs.kt.clus.ext.exhaustivesearch.ClusExhaustiveSearch
 
initSelectorAndSplit(ClusStatistic) - Method in class si.ijs.kt.clus.algo.split.FindBestTest
 
initSelectorAndSplit(ClusStatistic) - Method in class si.ijs.kt.clus.algo.tdidt.DepthFirstInduce
 
initSelectorAndSplit(ClusStatistic) - Method in class si.ijs.kt.clus.ext.bestfirst.BestFirstInduce
 
initSelectorAndSplit(ClusStatistic) - Method in class si.ijs.kt.clus.ext.optiontree.FindBestTests
 
initSelectorAndStopCrit(ClusNode, RowData) - Method in class si.ijs.kt.clus.algo.tdidt.DepthFirstInduce
 
initSelectorAndStopCrit(ClusNode, RowData) - Method in class si.ijs.kt.clus.ext.bestfirst.BestFirstInduce
 
initSelectorAndStopCrit(ClusStatistic, RowData) - Method in class si.ijs.kt.clus.algo.split.FindBestTest
 
initSelectorAndStopCrit(ClusStatistic, RowData) - Method in class si.ijs.kt.clus.ext.optiontree.FindBestTests
 
initSettings(Settings) - Method in class si.ijs.kt.clus.data.type.hierarchies.ClassesAttrType
 
initSettings(CMDLineArgs) - Method in class si.ijs.kt.clus.addon.sit.Sit
Initialize the settings object
initSettings(CMDLineArgs) - Method in class si.ijs.kt.clus.Clus
 
initSignifcanceTestingTable() - Method in class si.ijs.kt.clus.main.ClusStatManager
Initializes a table with Chi Squared inverse probabilities used in significance testing of rules.
initSingleTargetFrom(double[]) - Method in class si.ijs.kt.clus.statistic.ClassificationStat
 
initStatistic() - Method in class si.ijs.kt.clus.main.ClusStatManager
 
initStatisticAndStatManager() - Method in class si.ijs.kt.clus.main.ClusStatManager
 
initStopCriterion() - Method in class si.ijs.kt.clus.main.ClusStatManager
 
initTargetStat(ClusStatManager, RowData) - Method in class si.ijs.kt.clus.algo.tdidt.ClusNode
Change the total statistic of the tree?
initTargetStat(ClusStatManager, RowData) - Method in class si.ijs.kt.clus.ext.optiontree.MyNode
 
initTargetStat(ClusStatManager, ClusStatistic, RowData) - Method in class si.ijs.kt.clus.algo.tdidt.ClusNode
 
initTargetStat(ClusStatManager, ClusStatistic, RowData) - Method in class si.ijs.kt.clus.ext.optiontree.MyNode
 
initTestSelector(ClusStatistic) - Method in class si.ijs.kt.clus.algo.split.CurrentBestTestAndHeuristic
 
initTestSelector(ClusStatistic) - Method in class si.ijs.kt.clus.ext.optiontree.TestAndHeuristic
 
initTestSelector(ClusStatistic, RowData) - Method in class si.ijs.kt.clus.algo.split.CurrentBestTestAndHeuristic
 
initTestSelector(ClusStatistic, RowData) - Method in class si.ijs.kt.clus.ext.optiontree.TestAndHeuristic
 
initTestSelectors(OptXValGroup) - Method in class si.ijs.kt.clus.ext.optxval.OptXValInduce
 
initTime() - Static method in class si.ijs.kt.clus.main.ClusStat
 
initTotStats(ClusStatistic) - Method in class si.ijs.kt.clus.algo.tdidt.ClusNode
 
initU(ClusNode) - Method in class si.ijs.kt.clus.pruning.CartPruning
 
initVisitors(ClusNode, int) - Static method in class si.ijs.kt.clus.ext.beamsearch.ClusBeamSizeConstraints
 
initWeights() - Method in class si.ijs.kt.clus.main.ClusStatManager
 
initWeights(ClusNormalizedAttributeWeights, NumericAttrType[], NominalAttrType[], INIFileNominalOrDoubleOrVector) - Method in class si.ijs.kt.clus.main.ClusStatManager
 
initWithNewSubspace(HashMap<Integer, Integer>) - Method in class si.ijs.kt.clus.ext.ensemble.ros.ClusROSModelInfo
 
initXVal(int) - Method in interface si.ijs.kt.clus.addon.sit.mtLearner.MTLearner
 
initXVal(int) - Method in class si.ijs.kt.clus.addon.sit.mtLearner.MTLearnerImpl
 
innerDistance - Variable in class si.ijs.kt.clus.error.sets.Accuracy
 
innerDistance - Variable in class si.ijs.kt.clus.error.sets.F1Score
 
innerDistance - Variable in class si.ijs.kt.clus.error.sets.HammingLossError
 
innerDistance - Variable in class si.ijs.kt.clus.error.sets.Precision
 
innerDistance - Variable in class si.ijs.kt.clus.error.sets.Recall
 
innerDistance - Variable in class si.ijs.kt.clus.error.sets.SubsetAccuracy
 
insert(ClusData, ClusSelection) - Method in class si.ijs.kt.clus.data.ClusData
 
insert(ClusData, ClusSelection) - Method in class si.ijs.kt.clus.data.rows.RowData
 
insert(ClusAttribute, ClusSelection, int) - Method in class si.ijs.kt.clus.data.cols.attribute.ClusAttribute
 
insert(ClusAttribute, ClusSelection, int) - Method in class si.ijs.kt.clus.data.cols.attribute.NominalAttribute
 
insert(ClusAttribute, ClusSelection, int) - Method in class si.ijs.kt.clus.data.cols.attribute.NumericAttribute
 
insert(ColTarget, ClusSelection, int) - Method in class si.ijs.kt.clus.data.cols.ColTarget
 
insertBefore(MyList) - Method in class si.ijs.kt.clus.util.jeans.util.list.MyListIter
 
insertElementAt(int, int) - Method in class si.ijs.kt.clus.util.jeans.util.array.MyIntArray
 
insertElementAt(Object, int) - Method in class si.ijs.kt.clus.util.jeans.util.MyArray
 
insertModel(int, ClusModelInfo) - Method in class si.ijs.kt.clus.model.io.ClusModelCollectionIO
 
insertNominal(ColTarget, ClusSelection, int) - Method in class si.ijs.kt.clus.data.cols.ColTarget
 
insertNumeric(ColTarget, ClusSelection, int) - Method in class si.ijs.kt.clus.data.cols.ColTarget
 
Int - Enum constant in enum class si.ijs.kt.clus.data.type.ClusAttrType.ValueType
 
Integer - Enum constant in enum class si.ijs.kt.clus.data.type.ClusAttrType.AttributeType
 
IntegerAttrType - Class in si.ijs.kt.clus.data.type.primitive
 
IntegerAttrType(String) - Constructor for class si.ijs.kt.clus.data.type.primitive.IntegerAttrType
 
IntegerAttrType.MySerializable - Class in si.ijs.kt.clus.data.type.primitive
 
IntegerStack - Class in si.ijs.kt.clus.util.jeans.util
 
IntegerStack() - Constructor for class si.ijs.kt.clus.util.jeans.util.IntegerStack
 
IntegerStack(int) - Constructor for class si.ijs.kt.clus.util.jeans.util.IntegerStack
 
IntegerStack(IntegerStack) - Constructor for class si.ijs.kt.clus.util.jeans.util.IntegerStack
 
INTERNAL_DISTR - Variable in class si.ijs.kt.clus.statistic.StatisticPrintInfo
 
internalInitialize(ClusNode) - Method in class si.ijs.kt.clus.pruning.CartPruning
 
internalRecursiveInitialize(ClusNode) - Method in class si.ijs.kt.clus.pruning.CartPruning
 
internalSequenceNext(ClusNode) - Method in class si.ijs.kt.clus.pruning.CartPruning
 
interpolate(double, ArrayList<double[]>) - Static method in class si.ijs.kt.clus.util.jeans.math.MathUtil
 
intersectSorted(int[], int[]) - Static method in class si.ijs.kt.clus.util.jeans.util.array.MyIntArray
 
IntervalCollection - Class in si.ijs.kt.clus.util.jeans.util
 
IntervalCollection() - Constructor for class si.ijs.kt.clus.util.jeans.util.IntervalCollection
 
IntervalCollection(String) - Constructor for class si.ijs.kt.clus.util.jeans.util.IntervalCollection
 
intHasMissing() - Method in class si.ijs.kt.clus.data.type.ClusAttrType
 
IntObject - Class in si.ijs.kt.clus.util.jeans.util.compound
 
IntObject(int, Object) - Constructor for class si.ijs.kt.clus.util.jeans.util.compound.IntObject
 
IntRangeCheck - Class in si.ijs.kt.clus.util.jeans.io.range
 
IntRangeCheck(int, int) - Constructor for class si.ijs.kt.clus.util.jeans.io.range.IntRangeCheck
 
INVALID_PREDICTION - Static variable in class si.ijs.kt.clus.util.tools.optimization.OptimizationProblem
A regression prediction for initialization.
InverseNumericTest - Class in si.ijs.kt.clus.model.test
 
InverseNumericTest(ClusAttrType, double, double) - Constructor for class si.ijs.kt.clus.model.test.InverseNumericTest
 
inverseTests() - Method in class si.ijs.kt.clus.algo.tdidt.ClusNode
 
IS_XVAL - Static variable in class si.ijs.kt.clus.main.settings.section.SettingsExperimental
 
isAbsolutePath(String) - Static method in class si.ijs.kt.clus.util.jeans.util.FileUtil
 
isAcceptable(ClusStatistic, ClusStatistic, ClusStatistic) - Method in class si.ijs.kt.clus.heuristic.ClusHeuristic
Flag that indicates whether the corresponding split is acceptable.
isAcceptable(ClusStatistic, ClusStatistic, ClusStatistic) - Method in class si.ijs.kt.clus.heuristic.GeneticDistanceHeuristicMatrix
 
isAddIntermediateClasses() - Method in class si.ijs.kt.clus.ext.hierarchical.ClassHierarchyPreproc
 
isAggregate() - Method in class si.ijs.kt.clus.ext.hierarchicalmtr.ClusHMTRNode
 
isAnyLabeled(int) - Method in class si.ijs.kt.clus.statistic.ClusStatistic
 
isAnyNaNOrZero(double[]) - Static method in class si.ijs.kt.clus.util.ClusUtil
 
isArrayIndexName(int, String) - Method in class si.ijs.kt.clus.util.jeans.io.ini.INIFileNominalOrDoubleOrVector
 
isArrayIndexName(String) - Method in class si.ijs.kt.clus.util.jeans.io.ini.INIFileNominalOrDoubleOrVector
 
isBeamChanged() - Method in class si.ijs.kt.clus.algo.rules.ClusRuleConstraintInduce
 
isBeamChanged() - Method in class si.ijs.kt.clus.algo.rules.ClusRuleInduce
 
isBeamChanged() - Method in class si.ijs.kt.clus.ext.beamsearch.ClusBeamSearch
 
isBeamChanged() - Method in class si.ijs.kt.clus.ext.exhaustivesearch.ClusExhaustiveSearch
 
isBeamPostPrune() - Method in class si.ijs.kt.clus.ext.beamsearch.ClusBeamSearch
 
isBeamPostPrune() - Method in class si.ijs.kt.clus.ext.exhaustivesearch.ClusExhaustiveSearch
 
isBeamPostPrune() - Method in class si.ijs.kt.clus.main.settings.section.SettingsBeamSearch
 
isBeamSearch() - Method in class si.ijs.kt.clus.main.ClusStatManager
 
isBeamSearchMode() - Method in class si.ijs.kt.clus.main.settings.section.SettingsBeamSearch
 
isBeamToForest() - Method in class si.ijs.kt.clus.main.settings.section.SettingsBeamSearch
 
isBinary() - Method in class si.ijs.kt.clus.model.test.NodeTest
Arity methods
isBinarySplit() - Method in class si.ijs.kt.clus.main.settings.section.SettingsTree
 
isCalcMean() - Method in class si.ijs.kt.clus.statistic.ClassificationStat
 
isCalError() - Method in class si.ijs.kt.clus.main.settings.section.SettingsHMLC
 
isClasses() - Method in class si.ijs.kt.clus.data.type.ClusAttrType
 
isClasses() - Method in class si.ijs.kt.clus.data.type.hierarchies.ClassesAttrType
 
isClassificationOrRegression() - Method in enum class si.ijs.kt.clus.main.ClusStatManager.Mode
 
isClassifTask() - Method in class si.ijs.kt.clus.util.tools.optimization.OptimizationProblem
 
isCloneAnonymousParent() - Method in class si.ijs.kt.clus.util.cloner.Cloner
 
isCloningEnabled() - Method in class si.ijs.kt.clus.util.cloner.Cloner
 
isClosed() - Method in class si.ijs.kt.clus.data.io.ClusReader
 
isClustering() - Method in class si.ijs.kt.clus.data.type.ClusAttrType
 
isComputeForModel(String) - Method in class si.ijs.kt.clus.error.common.ClusError
 
isComputeForModel(String) - Method in class si.ijs.kt.clus.error.hmlc.HierClassWiseAccuracy
 
isComputeForModel(String) - Method in class si.ijs.kt.clus.error.hmlc.HierErrorMeasures
 
isComputeForModel(String) - Method in class si.ijs.kt.clus.error.mlcForHmlc.MlcMeasuresForHmlc
 
isComputeForModel(String) - Method in class si.ijs.kt.clus.ext.timeseries.TimeSeriesSignificantChangeTesterXVAL
 
isConstrainedToFirstAttVal() - Method in class si.ijs.kt.clus.main.settings.section.SettingsRules
 
isCovered(int, int) - Method in class si.ijs.kt.clus.util.tools.optimization.OptimizationProblem
Does the base function cover the given example? This should be used instead of checkin if prediction is NaN.
isDAG() - Method in class si.ijs.kt.clus.ext.hierarchical.ClassHierarchy
 
isDebug() - Static method in class si.ijs.kt.clus.Clus
A convenience method.
isDebug(Clus.DebugType) - Static method in class si.ijs.kt.clus.Clus
Checks if global debugging flags are set for the input flag.
isDEBUG() - Method in class si.ijs.kt.clus.algo.kNN.methods.SearchAlgorithm
Check if DEBUG mode is on.
isDefault() - Method in class si.ijs.kt.clus.util.jeans.util.IntervalCollection
 
isDefaultTarget() - Method in class si.ijs.kt.clus.main.settings.section.SettingsAttribute
 
isDescriptive() - Method in class si.ijs.kt.clus.data.type.ClusAttrType
 
isDisabled() - Method in class si.ijs.kt.clus.data.type.ClusAttrType
 
isDoNotInduce() - Method in class si.ijs.kt.clus.main.settings.section.SettingsGeneral
 
isDouble() - Method in class si.ijs.kt.clus.util.jeans.io.ini.INIFileStringOrDouble
 
isDouble(String) - Static method in class si.ijs.kt.clus.util.jeans.math.MDouble
 
isDouble(String) - Static method in class si.ijs.kt.clus.util.jeans.util.StringUtils
 
isDoubleOrNull(String) - Method in class si.ijs.kt.clus.util.jeans.io.ini.INIFileStringOrDouble
 
isDumpClonedClasses() - Method in class si.ijs.kt.clus.util.cloner.Cloner
 
isEarlyStop(ArrayList<Double>) - Method in class si.ijs.kt.clus.util.tools.optimization.gd.GDProblem
Early stopping is triggered when the error rate is bigger than the smallest_error_rate multiplied by getSettings().getRules().getOptGDEarlyStopTreshold() = overfitting
isEfficient() - Method in class si.ijs.kt.clus.heuristic.ClusHeuristic
 
isEfficient() - Method in class si.ijs.kt.clus.heuristic.VarianceReductionHeuristicEfficient
 
isEmpty() - Method in class si.ijs.kt.clus.algo.rules.ClusRule
 
isEmpty() - Method in class si.ijs.kt.clus.util.jeans.util.IntegerStack
 
isEmpty() - Method in class si.ijs.kt.clus.util.jeans.util.IntervalCollection
 
isEmpty() - Method in class si.ijs.kt.clus.util.jeans.util.list.MyListIter
 
isEnabled() - Method in class si.ijs.kt.clus.util.jeans.io.ini.INIFileNode
 
isEnabled() - Method in class si.ijs.kt.clus.util.jeans.io.MyFile
 
isEnabledObjectiveAccuracy() - Method in class si.ijs.kt.clus.algo.rules.probabilistic.ClusRuleProbabilisticRuleSetInduceWeights
 
isEnabledObjectiveCardinality() - Method in class si.ijs.kt.clus.algo.rules.probabilistic.ClusRuleProbabilisticRuleSetInduceWeights
 
isEnabledObjectiveCorrectCover() - Method in class si.ijs.kt.clus.algo.rules.probabilistic.ClusRuleProbabilisticRuleSetInduceWeights
 
isEnabledObjectiveIncorrectCover() - Method in class si.ijs.kt.clus.algo.rules.probabilistic.ClusRuleProbabilisticRuleSetInduceWeights
 
isEnabledObjectiveOverlap() - Method in class si.ijs.kt.clus.algo.rules.probabilistic.ClusRuleProbabilisticRuleSetInduceWeights
 
isEnabledObjectiveSize() - Method in class si.ijs.kt.clus.algo.rules.probabilistic.ClusRuleProbabilisticRuleSetInduceWeights
 
isEnsembleMode() - Method in class si.ijs.kt.clus.main.settings.section.SettingsEnsemble
 
isEnsembleRandomDepth() - Method in class si.ijs.kt.clus.main.settings.section.SettingsEnsemble
Do we want to use different random depth for different iterations of ensemble.
isEnsembleROSEnabled() - Method in class si.ijs.kt.clus.main.settings.section.SettingsEnsemble
 
isEnsembleWithParallelExecution() - Method in class si.ijs.kt.clus.main.settings.section.SettingsEnsemble
 
isEol() - Method in class si.ijs.kt.clus.data.io.ClusReader
 
isEqualLength() - Method in class si.ijs.kt.clus.data.type.complex.SetAttrType
 
isEqualLength() - Method in class si.ijs.kt.clus.data.type.primitive.TimeSeriesAttrType
 
isEvalClass(int) - Method in class si.ijs.kt.clus.error.hmlc.HierClassWiseAccuracy
 
isEvalClass(int) - Method in class si.ijs.kt.clus.error.hmlc.HierErrorMeasures
 
isEvalClass(int) - Method in class si.ijs.kt.clus.error.mlcForHmlc.MlcMeasuresForHmlc
 
isExhaustiveSearch() - Method in class si.ijs.kt.clus.main.settings.section.SettingsExhaustiveSearch
 
isFakeLeaf() - Method in class si.ijs.kt.clus.util.jeans.tree.BinaryNode
 
isFastBS() - Method in class si.ijs.kt.clus.main.settings.section.SettingsBeamSearch
 
isFinished() - Method in class si.ijs.kt.clus.ext.beamsearch.ClusBeamModel
 
isFinished() - Method in class si.ijs.kt.clus.ext.beamsearch.ClusBeamSizeConstraints
 
isFrozen() - Method in interface si.ijs.kt.clus.util.cloner.IFreezable
 
isGainRatio() - Method in class si.ijs.kt.clus.heuristic.GainHeuristic
 
isGIS() - Method in class si.ijs.kt.clus.data.type.ClusAttrType
 
isGzipOutput() - Method in class si.ijs.kt.clus.main.settings.section.SettingsOutput
If set to Yes, the output files will be GZiped (including .out and .pred.arff files)
isHeaderWritten() - Method in class si.ijs.kt.clus.ext.beamsearch.ClusBeamSimilarityOutput
 
isHeurPrototypeDistPar() - Method in class si.ijs.kt.clus.main.settings.section.SettingsRules
 
isHeurRuleDist() - Method in class si.ijs.kt.clus.main.settings.section.SettingsRules
 
isHierNoRootPreds() - Method in class si.ijs.kt.clus.main.settings.section.SettingsHMLC
 
isHMTREnabled() - Method in class si.ijs.kt.clus.main.settings.section.SettingsHMTR
 
isHMTRUsingDump() - Method in class si.ijs.kt.clus.main.settings.section.SettingsHMTR
 
isILevelCCOPKMeans() - Method in class si.ijs.kt.clus.main.settings.section.SettingsILevelC
 
isILevelCMPCKMeans() - Method in class si.ijs.kt.clus.main.settings.section.SettingsILevelC
 
isIllegal() - Method in class si.ijs.kt.clus.ext.ilevelc.COPKMeansModel
 
isIn(int, int) - Method in class si.ijs.kt.clus.addon.ILevelC.ilevelc.ILevelCGUI.ILevelCComponent
 
isInitialized() - Method in class si.ijs.kt.clus.model.processor.ClusEnsemblePredictionWriter
 
isInt() - Method in class si.ijs.kt.clus.util.jeans.io.ini.INIFileStringOrInt
 
isInt(String) - Static method in class si.ijs.kt.clus.util.jeans.io.ini.INIFileStringOrInt
 
isInteger(String) - Static method in class si.ijs.kt.clus.util.jeans.util.StringUtils
 
isIntermediate() - Method in class si.ijs.kt.clus.ext.hierarchical.ClassesValue
 
isIntersectSorted(int[], int[]) - Static method in class si.ijs.kt.clus.util.jeans.util.array.MyIntArray
 
isIntOrNull(String) - Method in class si.ijs.kt.clus.util.jeans.io.ini.INIFileStringOrInt
 
isInvalid() - Method in class si.ijs.kt.clus.ext.ilevelc.ILevelCRandIndex
 
isInverseNumeric() - Method in class si.ijs.kt.clus.model.test.ClusRuleConstraintInduceTest
 
isInverseNumeric() - Method in class si.ijs.kt.clus.model.test.InverseNumericTest
 
isInverseNumeric() - Method in class si.ijs.kt.clus.model.test.NumericTest
 
isKey() - Method in class si.ijs.kt.clus.data.type.ClusAttrType
 
isKNN() - Method in class si.ijs.kt.clus.main.settings.section.SettingsKNN
 
isLeaf() - Method in class si.ijs.kt.clus.algo.kNN.methods.kdTree.KDNode
If node is an leaf in tree, function returns true, false otherwise.
isLibLoaded() - Static method in class si.ijs.kt.clus.util.ResourceInfo
 
isLocked() - Method in class si.ijs.kt.clus.ext.hierarchical.ClassHierarchy
 
isLonglat() - Method in class si.ijs.kt.clus.main.settings.section.SettingsTree
 
isLOOXVal() - Method in class si.ijs.kt.clus.main.settings.section.SettingsData
 
isMissing(DataTuple) - Method in class si.ijs.kt.clus.data.type.ClusAttrType
 
isMissing(DataTuple) - Method in class si.ijs.kt.clus.data.type.hierarchies.ClassesAttrType
 
isMissing(DataTuple) - Method in class si.ijs.kt.clus.data.type.primitive.NominalAttrType
 
isMissing(DataTuple) - Method in class si.ijs.kt.clus.data.type.primitive.NumericAttrType
 
isMissing(DataTuple) - Method in class si.ijs.kt.clus.data.type.primitive.SparseNumericAttrType
 
isMissing(DataTuple, ClusAttrType[]) - Static method in class si.ijs.kt.clus.selection.CriterionBasedSelection
 
isMlcKnn() - Method in class si.ijs.kt.clus.main.settings.section.SettingsKNN
 
isModelWriter() - Method in class si.ijs.kt.clus.algo.ClusInductionAlgorithm
 
isModelWriter() - Method in class si.ijs.kt.clus.ext.beamsearch.ClusBeamInduce
 
isModelWriter() - Method in class si.ijs.kt.clus.ext.exhaustivesearch.ClusExhaustiveInduce
 
isModified() - Method in class si.ijs.kt.clus.ext.beamsearch.ClusBeamSizeConstraints
 
isMSENominal() - Method in class si.ijs.kt.clus.main.settings.section.SettingsTree
 
isMultiLine() - Method in class si.ijs.kt.clus.error.common.ClusError
 
isMultiLine() - Method in class si.ijs.kt.clus.error.ContingencyTable
 
isMultiLine() - Method in class si.ijs.kt.clus.error.hmlc.HierErrorMeasures
 
isMultiLine() - Method in class si.ijs.kt.clus.error.mlcForHmlc.MlcMeasuresForHmlc
 
isNaN(double) - Static method in class si.ijs.kt.clus.util.ClusUtil
 
isNaNOrZero(double) - Static method in class si.ijs.kt.clus.util.ClusUtil
 
isNewerOrEqual(String, String) - Static method in class si.ijs.kt.clus.util.jeans.util.FileUtil
 
isNextChar(int) - Method in class si.ijs.kt.clus.data.io.ClusReader
 
isNextCharNoSpace(int) - Method in class si.ijs.kt.clus.data.io.ClusReader
 
isNextToken(char) - Method in class si.ijs.kt.clus.util.jeans.util.MStreamTokenizer
 
isNextToken(String) - Method in class si.ijs.kt.clus.data.io.ClusReader
 
isNextToken(String) - Method in class si.ijs.kt.clus.util.jeans.util.MStreamTokenizer
 
isNextToken(String) - Method in class si.ijs.kt.clus.util.jeans.util.MStringTokenizer
 
isNextToken(String) - Method in class si.ijs.kt.clus.util.jeans.util.MTokenizer
 
isNextTokenIn(String) - Method in class si.ijs.kt.clus.util.jeans.util.MStreamTokenizer
 
isNextTokenIn(String) - Method in class si.ijs.kt.clus.util.jeans.util.MStringTokenizer
 
isNextTokenIn(String) - Method in class si.ijs.kt.clus.util.jeans.util.MTokenizer
 
isNominal() - Method in class si.ijs.kt.clus.data.type.ClusAttrType
 
isNominal() - Method in class si.ijs.kt.clus.data.type.primitive.NominalAttrType
 
isNominal() - Method in class si.ijs.kt.clus.util.jeans.io.ini.INIFileNominalOrDoubleOrVector
 
isNominal() - Method in class si.ijs.kt.clus.util.jeans.io.ini.INIFileNominalOrIntOrVector
 
isNominal(int) - Method in class si.ijs.kt.clus.util.jeans.io.ini.INIFileNominalOrDoubleOrVector
 
isNominal(int) - Method in class si.ijs.kt.clus.util.jeans.io.ini.INIFileNominalOrIntOrVector
 
isNominalSubsetTests() - Method in class si.ijs.kt.clus.main.settings.section.SettingsModel
 
isNoTrivialClasses() - Method in class si.ijs.kt.clus.error.hmlc.HierClassWiseAccuracy
 
isNullFile() - Method in class si.ijs.kt.clus.main.settings.section.SettingsData
 
isNullGIS() - Method in class si.ijs.kt.clus.main.settings.section.SettingsAttribute
 
isNullPruneFile() - Method in class si.ijs.kt.clus.main.settings.section.SettingsData
 
isNullTarget() - Method in class si.ijs.kt.clus.main.settings.section.SettingsAttribute
 
isNullTestFile() - Method in class si.ijs.kt.clus.main.settings.section.SettingsData
 
isNullTransient() - Method in class si.ijs.kt.clus.util.cloner.Cloner
 
isNullUnlabeledFile() - Method in class si.ijs.kt.clus.main.settings.section.SettingsSSL
 
isNullXValFile() - Method in class si.ijs.kt.clus.main.settings.section.SettingsData
 
isNumeric() - Method in class si.ijs.kt.clus.data.type.ClusAttrType
 
isNumeric() - Method in class si.ijs.kt.clus.data.type.primitive.NumericAttrType
 
isNumeric() - Method in class si.ijs.kt.clus.ext.hierarchical.ClassTerm
 
isOOBCalculation() - Static method in class si.ijs.kt.clus.ext.ensemble.ClusOOBErrorEstimate
 
isOOBForTree(DataTuple, int) - Static method in class si.ijs.kt.clus.ext.ensemble.ClusOOBErrorEstimate
Returns true is a given tuple is OOB for a tree in random forest with a specified number
isOptAddLinearTerms() - Method in class si.ijs.kt.clus.main.settings.section.SettingsRules
Do we add linear terms to rule set
isOptDefaultShiftPred() - Method in class si.ijs.kt.clus.main.settings.section.SettingsRules
Shift predictions according to the default prediction.
isOptGDIsDynStepsize() - Method in class si.ijs.kt.clus.main.settings.section.SettingsRules
GD Step size ]0,1] for each iteration.
isOptimized() - Static method in class si.ijs.kt.clus.ext.ensemble.ClusEnsembleInduce
Memory optimization
isOptLinearTermsTruncate() - Method in class si.ijs.kt.clus.main.settings.section.SettingsRules
Are linear terms truncated so that they do not predict values greater or lower than found in the training set.
isOptNormalization() - Method in class si.ijs.kt.clus.main.settings.section.SettingsRules
Do we normalize the predictions and true values internally for optimization.
isOptNormalizeLinearTerms() - Method in class si.ijs.kt.clus.main.settings.section.SettingsRules
Do we scale linear terms so that the attributes have similar effect
isOptOmitRulePredictions() - Method in class si.ijs.kt.clus.main.settings.section.SettingsRules
Do we omit rule predictions
isOptWeightGenerality() - Method in class si.ijs.kt.clus.main.settings.section.SettingsRules
Do we scale the predictions of the rules with the generality.
isOutFoldData() - Method in class si.ijs.kt.clus.main.settings.section.SettingsOutput
 
isOutFoldError() - Method in class si.ijs.kt.clus.main.settings.section.SettingsOutput
 
isOutputClowdFlowsJSON() - Method in class si.ijs.kt.clus.main.settings.section.SettingsOutput
 
isOutputDatabaseQueries() - Method in class si.ijs.kt.clus.main.settings.section.SettingsOutput
 
isOutputFoldModels() - Method in class si.ijs.kt.clus.main.settings.section.SettingsOutput
 
isOutputJSONModel() - Method in class si.ijs.kt.clus.main.settings.section.SettingsOutput
 
isOutputPythonModel() - Method in class si.ijs.kt.clus.main.settings.section.SettingsOutput
 
isOutputROSSubspaces() - Method in class si.ijs.kt.clus.main.settings.section.SettingsOutput
 
isOutTestError() - Method in class si.ijs.kt.clus.main.settings.section.SettingsOutput
 
isOutTrainError() - Method in class si.ijs.kt.clus.main.settings.section.SettingsOutput
 
isOutValidError() - Method in class si.ijs.kt.clus.main.settings.section.SettingsOutput
 
isPartiallyLabeled() - Method in class si.ijs.kt.clus.data.rows.DataTuple
DataTuple is considered partially unlabeled if it has missing values for any of its target attributes
isPrintAllRules() - Method in class si.ijs.kt.clus.main.settings.section.SettingsRules
 
isPrintEnsembleModelFiles() - Method in class si.ijs.kt.clus.main.settings.section.SettingsEnsemble
 
isPrintEnsembleModelInfo() - Method in class si.ijs.kt.clus.main.settings.section.SettingsEnsemble
 
isPrintEnsembleModels() - Method in class si.ijs.kt.clus.main.settings.section.SettingsEnsemble
 
isPrintEnsemblePaths() - Method in class si.ijs.kt.clus.main.settings.section.SettingsEnsemble
 
isPrintModelAndExamples() - Method in class si.ijs.kt.clus.main.settings.section.SettingsOutput
 
isPrintModels() - Method in class si.ijs.kt.clus.ext.ensemble.ClusForest
 
isPruneSetString(String) - Method in class si.ijs.kt.clus.main.settings.section.SettingsData
 
isRandom() - Method in class si.ijs.kt.clus.ext.ensemble.ros.ClusROSModelInfo
 
isRandomPerTree() - Method in class si.ijs.kt.clus.ext.ensemble.ros.ClusROSModelInfo
 
isRandomRules() - Method in class si.ijs.kt.clus.main.settings.section.SettingsRules
Returns if random rules are wanted.
isRealSeparator(int) - Method in class si.ijs.kt.clus.util.jeans.util.MStreamTokenizer
 
isRecording() - Method in class si.ijs.kt.clus.model.io.ClusTreeReader
 
isRefined() - Method in class si.ijs.kt.clus.ext.beamsearch.ClusBeamModel
 
isRegression() - Method in class si.ijs.kt.clus.data.ClusSchema
 
isRegularRule() - Method in class si.ijs.kt.clus.algo.rules.ClusRule
Is this a regular rule or some other type of learner (e.g.
isRegularRule() - Method in class si.ijs.kt.clus.algo.rules.ClusRuleLinearTerm
Is this a regular rule or some other type of learner (e.g.
isRelief() - Method in class si.ijs.kt.clus.main.settings.section.SettingsRelief
 
isRemoveMissingTarget() - Method in class si.ijs.kt.clus.main.settings.section.SettingsData
 
isRoot() - Method in class si.ijs.kt.clus.ext.hierarchical.ClassesTuple
 
isRoot() - Method in class si.ijs.kt.clus.ext.hierarchical.ClassesValue
 
isRoot() - Method in class si.ijs.kt.clus.ext.hierarchicalmtr.ClusHMTRNode
 
isROSParameterAutoTune() - Method in class si.ijs.kt.clus.main.settings.section.SettingsRules
 
isRuleInduceOnly() - Method in class si.ijs.kt.clus.main.ClusStatManager
 
isRulePredictionOptimized() - Method in class si.ijs.kt.clus.main.settings.section.SettingsRules
 
isRuleSignificanceTesting() - Method in class si.ijs.kt.clus.main.settings.section.SettingsRules
 
isRuleTerm(int) - Method in class si.ijs.kt.clus.util.tools.optimization.OptimizationProblem
Is the predictor of given index a regular rule
isRuleWiseErrors() - Method in class si.ijs.kt.clus.main.settings.section.SettingsRules
 
isSection() - Method in class si.ijs.kt.clus.util.jeans.io.ini.INIFileEntry
 
isSection() - Method in class si.ijs.kt.clus.util.jeans.io.ini.INIFileNode
 
isSection() - Method in class si.ijs.kt.clus.util.jeans.io.ini.INIFileSection
 
isSection() - Method in class si.ijs.kt.clus.util.jeans.io.ini.INIFileSectionGroup
 
isSectionEnsembleEnabled() - Method in class si.ijs.kt.clus.main.settings.section.SettingsEnsemble
Do we print ensemble settings to output files
isSectionGroup() - Method in class si.ijs.kt.clus.util.jeans.io.ini.INIFileEntry
 
isSectionGroup() - Method in class si.ijs.kt.clus.util.jeans.io.ini.INIFileNode
 
isSectionGroup() - Method in class si.ijs.kt.clus.util.jeans.io.ini.INIFileSection
 
isSectionGroup() - Method in class si.ijs.kt.clus.util.jeans.io.ini.INIFileSectionGroup
 
isSectionHierarchicalEnabled() - Method in class si.ijs.kt.clus.main.settings.section.SettingsHMLC
 
isSectionHMTREnabled() - Method in class si.ijs.kt.clus.main.settings.section.SettingsHMTR
 
isSectionILevelCEnabled() - Method in class si.ijs.kt.clus.main.settings.section.SettingsILevelC
 
isSectionOptionEnabled() - Method in class si.ijs.kt.clus.main.settings.section.SettingsOptionTree
 
isSectionPhylogenyEnabled() - Method in class si.ijs.kt.clus.main.settings.section.SettingsPhylogeny
 
isSectionTimeSeriesEnabled() - Method in class si.ijs.kt.clus.main.settings.section.SettingsTimeSeries
 
isSelected(int) - Method in class si.ijs.kt.clus.selection.BagSelection
 
isSelected(int) - Method in class si.ijs.kt.clus.selection.BitMapSelection
 
isSelected(int) - Method in class si.ijs.kt.clus.selection.ClusSelection
 
isSelected(int) - Method in class si.ijs.kt.clus.selection.OOBSelection
 
isSelected(int) - Method in class si.ijs.kt.clus.selection.OverSample
 
isSelected(int) - Method in class si.ijs.kt.clus.selection.RandomSelection
 
isSelected(int) - Method in class si.ijs.kt.clus.selection.XValSelection
 
isSelected(int, int) - Method in class si.ijs.kt.clus.selection.XValMainSelection
 
isSemiSupervisedMode() - Method in class si.ijs.kt.clus.main.settings.section.SettingsSSL
 
isSeparator(int) - Method in class si.ijs.kt.clus.util.jeans.util.MStreamTokenizer
 
isShowBranchFreq() - Method in class si.ijs.kt.clus.main.settings.section.SettingsOutput
 
isShowUnknown() - Method in class si.ijs.kt.clus.main.settings.section.SettingsOutput
 
isShowXValForest() - Method in class si.ijs.kt.clus.main.settings.section.SettingsExperimental
 
isSideOne(DataTuple) - Method in class si.ijs.kt.clus.ext.ilevelc.ILevelConstraint
 
isSinglePass() - Method in class si.ijs.kt.clus.ext.hierarchical.ClassHierarchyPreproc
 
isSkipLine(String) - Static method in class si.ijs.kt.clus.model.io.ClusTreeReader
 
isSmallerThanTest() - Method in class si.ijs.kt.clus.model.test.ClusRuleConstraintInduceTest
 
isSoft() - Method in class si.ijs.kt.clus.data.rows.RowData
 
isSoft() - Method in class si.ijs.kt.clus.model.test.NodeTest
 
isSoft() - Method in class si.ijs.kt.clus.model.test.SoftTest
 
isSparse() - Method in class si.ijs.kt.clus.data.ClusSchema
 
isSparse() - Method in class si.ijs.kt.clus.data.rows.DataTuple
 
isSparse() - Method in class si.ijs.kt.clus.data.rows.RowData
 
isSparse() - Method in class si.ijs.kt.clus.data.rows.SparseDataTuple
 
isSparse() - Method in class si.ijs.kt.clus.data.type.ClusAttrType
 
isSparse() - Method in class si.ijs.kt.clus.data.type.primitive.NumericAttrType
 
isSplit() - Method in class si.ijs.kt.clus.data.cols.attribute.ClusAttribute
 
isStopCrit() - Method in class si.ijs.kt.clus.ext.beamsearch.ClusBeamAttrSelector
 
isString() - Method in class si.ijs.kt.clus.data.type.ClusAttrType
 
isString() - Method in class si.ijs.kt.clus.data.type.primitive.StringAttrType
 
isString(String) - Method in class si.ijs.kt.clus.util.jeans.io.ini.INIFileStringOrDouble
 
isString(String) - Method in class si.ijs.kt.clus.util.jeans.io.ini.INIFileStringOrInt
 
isTarget() - Method in class si.ijs.kt.clus.data.type.ClusAttrType
 
isTargetEnabled(int) - Method in class si.ijs.kt.clus.ext.ensemble.ros.ClusROSModelInfo
 
isTesting() - Method in class si.ijs.kt.clus.data.rows.DataTuple
 
isTimeSeries() - Method in class si.ijs.kt.clus.data.type.ClusAttrType
 
isTimeSeries() - Method in class si.ijs.kt.clus.data.type.primitive.TimeSeriesAttrType
 
isTimeSeriesProtoComlexityExact() - Method in class si.ijs.kt.clus.main.settings.section.SettingsTimeSeries
 
isTraining() - Method in class si.ijs.kt.clus.data.rows.DataTuple
 
isTree() - Method in class si.ijs.kt.clus.ext.hierarchical.ClassHierarchy
 
isTreeToRuleInduce() - Method in class si.ijs.kt.clus.main.ClusStatManager
Often Tree to Rule is a exception for isRuleInduceOnly
isUnknown(DataTuple) - Method in class si.ijs.kt.clus.model.test.NodeTest
 
isUnlabeled() - Method in class si.ijs.kt.clus.data.rows.DataTuple
DataTuple is considered unlabeled if it has missing values for all of its target attributes
isUseBonferroni() - Method in class si.ijs.kt.clus.main.settings.section.SettingsHMLC
 
isUsingAdditiveError() - Method in class si.ijs.kt.clus.pruning.SizeConstraintPruning
 
isUsingDump() - Method in class si.ijs.kt.clus.ext.hierarchicalmtr.ClusHMTRHierarchy
 
isValidPrediction() - Method in class si.ijs.kt.clus.statistic.ClusStatistic
 
isValidValue(double) - Method in class si.ijs.kt.clus.util.tools.optimization.OptimizationProblem
Is prediction/true value valid value
isVector() - Method in class si.ijs.kt.clus.util.jeans.io.ini.INIFileNominalOrDoubleOrVector
 
isVector() - Method in class si.ijs.kt.clus.util.jeans.io.ini.INIFileNominalOrIntOrVector
 
IsVector() - Method in class si.ijs.kt.clus.util.jeans.io.ini.INIFileEnumList
 
isVotingOOBWeighted() - Method in class si.ijs.kt.clus.main.settings.section.SettingsEnsemble
 
isWeightedCovering() - Method in class si.ijs.kt.clus.main.settings.section.SettingsRules
 
isWriteCurves() - Method in class si.ijs.kt.clus.main.settings.section.SettingsOutput
 
isWriteErrorFile() - Method in class si.ijs.kt.clus.main.settings.section.SettingsOutput
 
isWriteModelFile() - Method in class si.ijs.kt.clus.main.settings.section.SettingsOutput
 
isWriteModelIDPredictions() - Method in class si.ijs.kt.clus.main.settings.section.SettingsOutput
 
isWriteOOBFile() - Method in class si.ijs.kt.clus.main.settings.section.SettingsOutput
 
isWriteTestSetPredictions() - Method in class si.ijs.kt.clus.main.settings.section.SettingsOutput
 
isWriteTrainSetPredictions() - Method in class si.ijs.kt.clus.main.settings.section.SettingsOutput
 
isZero(double) - Static method in class si.ijs.kt.clus.util.ClusUtil
 
itemsetcpt - Static variable in class si.ijs.kt.clus.main.Global
 
Iterations - Enum constant in enum class si.ijs.kt.clus.main.settings.section.SettingsSSL.SSLStoppingCriteria
Iterations - stop after specified number of iterations
iterator() - Method in class si.ijs.kt.clus.algo.kNN.methods.bfMethod.ArrayOfArraysIterator
 
IwithNeighbours - Enum constant in enum class si.ijs.kt.clus.main.settings.section.SettingsTree.SpatialMeasure
 

J

Jaccard - Enum constant in enum class si.ijs.kt.clus.main.settings.section.SettingsHMLC.HierarchyDistance
 
Jaccard - Enum constant in enum class si.ijs.kt.clus.main.settings.section.SettingsHMTR.HierarchyDistanceHMTR
 
Jaccard - Enum constant in enum class si.ijs.kt.clus.main.settings.section.SettingsTree.SetDistance
 
JaccardDistance - Class in si.ijs.kt.clus.distance.complex.sets
 
JaccardDistance(SetAttrType, ClusDistance) - Constructor for class si.ijs.kt.clus.distance.complex.sets.JaccardDistance
 
JaccardDistance(ClusDistance) - Constructor for class si.ijs.kt.clus.distance.complex.sets.JaccardDistance
 
JC - Enum constant in enum class si.ijs.kt.clus.main.settings.section.SettingsPhylogeny.PhylogenyDistanceMeasure
 
joinPythonForestInOneFile(ClusRun) - Method in class si.ijs.kt.clus.ext.ensemble.ClusForest
Used when optimization of ensembles is ON.
joinWithSubmodels(ArrayList<ClusNode>) - Method in class si.ijs.kt.clus.algo.tdidt.ClusNode
 

K

KDNode - Class in si.ijs.kt.clus.algo.kNN.methods.kdTree
 
KDNode(KDTree, int) - Constructor for class si.ijs.kt.clus.algo.kNN.methods.kdTree.KDNode
 
KDTree - Class in si.ijs.kt.clus.algo.kNN.methods.kdTree
 
KDTree - Enum constant in enum class si.ijs.kt.clus.main.settings.section.SettingsKNN.SearchMethod
 
KDTree(ClusRun, SearchDistance) - Constructor for class si.ijs.kt.clus.algo.kNN.methods.kdTree.KDTree
 
Key - Enum constant in enum class si.ijs.kt.clus.data.type.ClusAttrType.AttributeUseType
 
Key - Enum constant in enum class si.ijs.kt.clus.data.type.ClusAttrType.Status
 
Key - Enum constant in enum class si.ijs.kt.clus.main.settings.section.SettingsOutput.ShowInfo
 
killFold(int) - Method in class si.ijs.kt.clus.ext.optxval.OptXValGroup
 
Kimura - Enum constant in enum class si.ijs.kt.clus.main.settings.section.SettingsPhylogeny.PhylogenyDistanceMeasure
 
KMostConfident - Enum constant in enum class si.ijs.kt.clus.main.settings.section.SettingsSSL.SSLUnlabeledCriteria
KMostConfident - K unlabeled instances with the most confident predictions will be added to the training set, K is a parameter
KnnClassifier - Class in si.ijs.kt.clus.algo.kNN
 
KnnClassifier(Clus) - Constructor for class si.ijs.kt.clus.algo.kNN.KnnClassifier
 
KNNLearner - Class in si.ijs.kt.clus.addon.sit.mtLearner
 
KNNLearner() - Constructor for class si.ijs.kt.clus.addon.sit.mtLearner.KNNLearner
 
KnnMlcStat - Class in si.ijs.kt.clus.statistic
 
KnnMlcStat(Settings, NominalAttrType[]) - Constructor for class si.ijs.kt.clus.statistic.KnnMlcStat
 
KnnMlcStat(Settings, NominalAttrType[], INIFileNominalOrDoubleOrVector) - Constructor for class si.ijs.kt.clus.statistic.KnnMlcStat
 
KnnModel - Class in si.ijs.kt.clus.algo.kNN
 
KnnModel(ClusRun, int, SettingsKNN.DistanceWeights, int, boolean, ClusAttrType[]) - Constructor for class si.ijs.kt.clus.algo.kNN.KnnModel
 
KnnModel(ClusRun, int, SettingsKNN.DistanceWeights, int, boolean, ClusAttrType[], int[]) - Constructor for class si.ijs.kt.clus.algo.kNN.KnnModel
 
KnnModel(ClusRun, int, SettingsKNN.DistanceWeights, KnnModel) - Constructor for class si.ijs.kt.clus.algo.kNN.KnnModel
 
KNNStatistics - Class in si.ijs.kt.clus.algo.kNN
Deprecated.
KNNStatistics(RowData) - Constructor for class si.ijs.kt.clus.algo.kNN.KNNStatistics
Deprecated.
 
KPercentageMostAverage - Enum constant in enum class si.ijs.kt.clus.main.settings.section.SettingsSSL.SSLUnlabeledCriteria
KPercentageMostAverage - the threshold is set to average confidence score of the K percentage most confident examples (set initially, and then this threshold is used throughout iterations)
KPercentageMostConfident - Enum constant in enum class si.ijs.kt.clus.main.settings.section.SettingsSSL.SSLUnlabeledCriteria
KPercentageMostConfident - K percentage of unlabeled instances with the most confident predictions will be added to the training set

L

LabeledOnly - Enum constant in enum class si.ijs.kt.clus.main.settings.section.SettingsSSL.SSLOOBErrorCalculation
calculate OOB error only on original labeled part
labelSet(ClusNode, boolean[]) - Method in class si.ijs.kt.clus.ext.ilevelc.ILevelCInduce
 
lambda - Variable in class si.ijs.kt.clus.pruning.CartVisitor
 
lambda_min - Variable in class si.ijs.kt.clus.pruning.CartVisitor
 
LanLongdistance(double, double, double, double) - Method in class si.ijs.kt.clus.heuristic.GISHeuristic
 
LanLongdistance(double, double, double, double) - Method in class si.ijs.kt.clus.heuristic.VarianceReductionHeuristicCompatibility
 
lastDelim() - Method in class si.ijs.kt.clus.util.jeans.util.MultiDelimStringTokenizer
 
LeafTreeIterator - Class in si.ijs.kt.clus.util.jeans.tree
 
LeafTreeIterator(LeafTreeIterator) - Constructor for class si.ijs.kt.clus.util.jeans.tree.LeafTreeIterator
 
LeafTreeIterator(Node) - Constructor for class si.ijs.kt.clus.util.jeans.tree.LeafTreeIterator
 
learnBeamOfRules(RowData) - Method in class si.ijs.kt.clus.algo.rules.ClusRuleConstraintInduce
Returns all the rules in the beam, not just the best one.
learnBeamOfRules(RowData) - Method in class si.ijs.kt.clus.algo.rules.ClusRuleInduce
Returns all the rules in the beam, not just the best one.
learnEmptyRule(RowData) - Method in class si.ijs.kt.clus.algo.rules.ClusRuleConstraintInduce
 
learnEmptyRule(RowData) - Method in class si.ijs.kt.clus.algo.rules.ClusRuleInduce
 
learner - Variable in class si.ijs.kt.clus.addon.sit.searchAlgorithm.GreedySIT
 
learner - Variable in class si.ijs.kt.clus.addon.sit.searchAlgorithm.SearchAlgorithmImpl
 
learner - Variable in class si.ijs.kt.clus.addon.sit.searchAlgorithm.SITFitnessFunction
 
LearnModel(TargetSet) - Method in interface si.ijs.kt.clus.addon.sit.mtLearner.MTLearner
Learns a model for the complete trainingset and returns predictions for the testset
LearnModel(TargetSet) - Method in class si.ijs.kt.clus.addon.sit.mtLearner.MTLearnerImpl
 
LearnModel(TargetSet, int) - Method in interface si.ijs.kt.clus.addon.sit.mtLearner.MTLearner
Learns a model for fold foldNr and returns the predictions for the remaining data
LearnModel(TargetSet, int) - Method in class si.ijs.kt.clus.addon.sit.mtLearner.MTLearnerImpl
 
LearnModel(TargetSet, RowData, RowData) - Method in class si.ijs.kt.clus.addon.sit.mtLearner.AvgLearner
 
LearnModel(TargetSet, RowData, RowData) - Method in class si.ijs.kt.clus.addon.sit.mtLearner.ClusLearner
 
LearnModel(TargetSet, RowData, RowData) - Method in class si.ijs.kt.clus.addon.sit.mtLearner.KNNLearner
 
LearnModel(TargetSet, RowData, RowData) - Method in class si.ijs.kt.clus.addon.sit.mtLearner.MTLearnerImpl
 
learnOneRule(RowData) - Method in class si.ijs.kt.clus.algo.rules.ClusRuleConstraintInduce
 
learnOneRule(RowData) - Method in class si.ijs.kt.clus.algo.rules.ClusRuleInduce
 
leastKelements(double[], int) - Static method in class si.ijs.kt.clus.ext.semisupervised.Helper
Returns K least elements of an array, together with indices
Leaves - Enum constant in enum class si.ijs.kt.clus.main.settings.section.SettingsOutput.ConvertRules
 
Lee - Enum constant in enum class si.ijs.kt.clus.main.settings.section.SettingsTree.SpatialMeasure
 
LeewithNeighbours - Enum constant in enum class si.ijs.kt.clus.main.settings.section.SettingsTree.SpatialMeasure
 
left - Variable in class si.ijs.kt.clus.pruning.SizeConstraintVisitor
 
LEFT_HIGH - Static variable in class si.ijs.kt.clus.algo.kNN.methods.vpTree.VPNode
 
LEFT_LOW - Static variable in class si.ijs.kt.clus.algo.kNN.methods.vpTree.VPNode
 
length() - Method in class si.ijs.kt.clus.ext.structuredTypes.Tuple
 
length() - Method in class si.ijs.kt.clus.ext.timeseries.TimeSeries
 
LESS - Static variable in interface si.ijs.kt.clus.util.jeans.util.sort.MComparator
 
LEVEL_WISE - Static variable in class si.ijs.kt.clus.algo.tdidt.ClusDecisionTree
 
LevelContTable - Class in si.ijs.kt.clus.ext.hierarchical
 
LevelContTable() - Constructor for class si.ijs.kt.clus.ext.hierarchical.LevelContTable
 
Levenshtein - Class in si.ijs.kt.clus.distance.primitive.relief
 
Levenshtein(String, String) - Constructor for class si.ijs.kt.clus.distance.primitive.relief.Levenshtein
 
Levenshtein(DataTuple, DataTuple, StringAttrType) - Constructor for class si.ijs.kt.clus.distance.primitive.relief.Levenshtein
 
Linear - Enum constant in enum class si.ijs.kt.clus.main.settings.section.SettingsTimeSeries.TimeSeriesPrototypeComplexity
 
linearParameter - Static variable in class si.ijs.kt.clus.statistic.SumPairwiseDistancesStat
 
lineno - Variable in class si.ijs.kt.clus.util.jeans.util.MStreamTokenizer
 
lineno - Variable in class si.ijs.kt.clus.util.jeans.util.MTokenizer
 
link(int, int) - Method in class si.ijs.kt.clus.util.jeans.util.DisjointSetForest
 
load() - Method in class si.ijs.kt.clus.addon.ILevelC.ilevelc.ILevelCGUI.ILevelCComponent
 
load(Reader, char) - Method in class si.ijs.kt.clus.util.jeans.io.ini.INIFile
 
load(String) - Static method in class si.ijs.kt.clus.model.io.ClusModelCollectionIO
 
load(String) - Method in class si.ijs.kt.clus.util.jeans.io.ini.INIFile
 
load(String, char) - Method in class si.ijs.kt.clus.util.jeans.io.ini.INIFile
 
load(String, ClusSchema) - Method in class si.ijs.kt.clus.ext.constraint.ClusConstraintFile
 
load(MStreamTokenizer) - Method in class si.ijs.kt.clus.util.jeans.io.ini.INIFileSection
 
load(MStreamTokenizer, char) - Method in class si.ijs.kt.clus.util.jeans.io.ini.INIFile
 
loadConstraintFile() - Method in class si.ijs.kt.clus.Clus
 
loadConstraints(String, ArrayList) - Static method in class si.ijs.kt.clus.ext.ilevelc.ILevelConstraint
 
loadConstraints(String, ArrayList, ArrayList) - Static method in class si.ijs.kt.clus.ext.ilevelc.ILevelConstraint
 
loadCurrentBesTestAndHeuristic(CurrentBestTestAndHeuristic) - Method in class si.ijs.kt.clus.ext.optiontree.TestAndHeuristic
 
loadDAG(String) - Method in class si.ijs.kt.clus.ext.hierarchical.ClassHierarchy
 
loadDAG(String[]) - Method in class si.ijs.kt.clus.ext.hierarchical.ClassHierarchy
 
loadDataFile(String) - Method in class si.ijs.kt.clus.Clus
 
loadFromFile() - Method in class si.ijs.kt.clus.main.settings.section.SettingsModel
 
loadFromFile(String) - Static method in class si.ijs.kt.clus.algo.kNN.distance.attributeWeighting.AttributeWeighting
 
loadHierarchy(String) - Method in class si.ijs.kt.clus.ext.hierarchical.ClassHierarchyIO
 
loadHierarchy(String, ClassesAttrType) - Method in class si.ijs.kt.clus.ext.hierarchical.ClassHierarchyIO
 
loadHierarchy(String, ClassHierarchy) - Method in class si.ijs.kt.clus.ext.hierarchical.ClassHierarchyIO
 
loadLibrary(boolean) - Static method in class si.ijs.kt.clus.util.ResourceInfo
 
LoadListener() - Constructor for class si.ijs.kt.clus.addon.ILevelC.ilevelc.ILevelCGUI.LoadListener
 
loadModel(String) - Method in class si.ijs.kt.clus.addon.hmc.HMCAverageSingleClass.HMCAverageSingleClass
 
loadModelPerModel(String, ClusRun) - Method in class si.ijs.kt.clus.addon.hmc.HMCAverageSingleClass.HMCAverageSingleClass
 
loadNeighboursFromFile(String) - Method in class si.ijs.kt.clus.ext.featureRanking.relief.nearestNeighbour.SaveLoadNeighbours
 
loadNeighboursFromFiles() - Method in class si.ijs.kt.clus.ext.featureRanking.relief.nearestNeighbour.SaveLoadNeighbours
 
loadOutTree(String, ClusSchema, String) - Method in class si.ijs.kt.clus.model.io.ClusTreeReader
 
loadRule(MStreamTokenizer, String) - Method in class si.ijs.kt.clus.addon.hmc.ClusAmandaRules.ClusAmandaRules
 
loadRules(String) - Method in class si.ijs.kt.clus.addon.hmc.ClusAmandaRules.ClusAmandaRules
 
loadTree(String, ClusSchema) - Method in class si.ijs.kt.clus.model.io.ClusTreeReader
 
loadTreeTree(String, ClusSchema) - Method in class si.ijs.kt.clus.model.io.ClusTreeReader
 
LocalGeary - Enum constant in enum class si.ijs.kt.clus.main.settings.section.SettingsTree.SpatialMeasure
 
LocalGetis - Enum constant in enum class si.ijs.kt.clus.main.settings.section.SettingsTree.SpatialMeasure
 
LocalMoran - Enum constant in enum class si.ijs.kt.clus.main.settings.section.SettingsTree.SpatialMeasure
 
locateTuple(DataTuple) - Method in class si.ijs.kt.clus.ext.ensemble.ClusEnsembleInduceOptimization
 
log() - Method in class si.ijs.kt.clus.util.jeans.io.MyFile
 
log(String) - Static method in class si.ijs.kt.clus.util.DebugFile
 
log(String) - Method in class si.ijs.kt.clus.util.jeans.io.MyFile
 
Log - Enum constant in enum class si.ijs.kt.clus.main.settings.section.SettingsTimeSeries.TimeSeriesPrototypeComplexity
 
LOG2 - Static variable in class si.ijs.kt.clus.data.type.BitwiseNominalAttrType
 
LOGSIZE - Static variable in class si.ijs.kt.clus.addon.ILevelC.ilevelc.ILevelCGUI
 
LONGLAT - Static variable in class si.ijs.kt.clus.main.settings.section.SettingsTree
 
looseOthers() - Method in class si.ijs.kt.clus.ext.beamsearch.ClusBeamTreeElem
 
looseOthers() - Method in class si.ijs.kt.clus.ext.beamsearch.ClusBeamTreeElemOld
 
loss(double[][], int) - Method in class si.ijs.kt.clus.util.tools.optimization.OptimizationProblem
Loss function for data set.
lowcost - Variable in class si.ijs.kt.clus.ext.beamsearch.ClusBeamSizeConstraintInfo
 

M

m_1SERule - Variable in class si.ijs.kt.clus.pruning.SequencePruningVSB
 
m_AbsDefError - Variable in class si.ijs.kt.clus.error.AbsoluteError
 
m_AbsError - Variable in class si.ijs.kt.clus.error.AbsoluteError
 
m_Abundance - Variable in class si.ijs.kt.clus.ext.hierarchical.ClassesValue
 
m_ActualArr - Variable in class si.ijs.kt.clus.error.hmlc.HierLevelAccuracy
 
m_AddIntermediates - Variable in class si.ijs.kt.clus.ext.hierarchical.ClassHierarchyPreproc
 
m_AdditiveError - Variable in class si.ijs.kt.clus.pruning.SizeConstraintPruning
 
m_AggregatedError - Variable in class si.ijs.kt.clus.ext.ensemble.ClusOOBWeights
 
m_AggregatedWeight - Variable in class si.ijs.kt.clus.ext.ensemble.ClusOOBWeights
 
m_Aggregation - Variable in class si.ijs.kt.clus.ext.semisupervised.confidence.PredictionConfidence
 
m_Alfa - Variable in class si.ijs.kt.clus.algo.rules.ClusRuleConstraintInduce
 
m_AllAttributes - Variable in class si.ijs.kt.clus.ext.featureRanking.ClusFeatureRanking
The keys are attribute names and the values are the arrays of the following form:
[type of the attribute, position of the attribute, relevance1, relevance2, ..., relevanceK]
where K >= 1 and each relevance corresponds to some ranking.
m_AllAttrUse - Variable in class si.ijs.kt.clus.data.ClusSchema
 
m_allCoveringRuleExists - Variable in class si.ijs.kt.clus.algo.rules.ClusRuleSet
If we have created an all examples covering rule that is in the first position of rules Used for weight optimization.
m_AllModelsMI - Variable in class si.ijs.kt.clus.main.ClusModelInfoList
 
m_Alpha - Variable in class si.ijs.kt.clus.ext.ensemble.ClusOOBWeights
 
m_AlphaValues - Variable in class si.ijs.kt.clus.heuristic.EncodingCost
 
m_AlphaValuesRecode4 - Variable in class si.ijs.kt.clus.heuristic.EncodingCost
 
m_Alternatives - Variable in class si.ijs.kt.clus.algo.tdidt.ClusNode
 
m_AlternativesString - Variable in class si.ijs.kt.clus.algo.tdidt.ClusNode
 
m_AppName - Variable in class si.ijs.kt.clus.main.settings.section.SettingsGeneric
 
m_AreaPR - Variable in class si.ijs.kt.clus.error.mlc.MLROCAndPRCurve
 
m_AreaPR - Variable in class si.ijs.kt.clus.error.mlcForHmlc.MLROCAndPRCurve
 
m_AreaPR - Variable in class si.ijs.kt.clus.error.ROCAndPRCurve
 
m_AreaROC - Variable in class si.ijs.kt.clus.error.mlc.MLROCAndPRCurve
 
m_AreaROC - Variable in class si.ijs.kt.clus.error.mlcForHmlc.MLROCAndPRCurve
 
m_AreaROC - Variable in class si.ijs.kt.clus.error.ROCAndPRCurve
 
m_ArrayDouble - Variable in class si.ijs.kt.clus.util.jeans.io.ini.INIFileNominalOrDoubleOrVector
 
m_ArrayIndex - Variable in class si.ijs.kt.clus.data.type.ClusAttrType
 
m_ArrayInt - Variable in class si.ijs.kt.clus.util.jeans.io.ini.INIFileNominalOrIntOrVector
 
m_ArrayNominal - Variable in class si.ijs.kt.clus.util.jeans.io.ini.INIFileNominalOrDoubleOrVector
 
m_ArrayNominal - Variable in class si.ijs.kt.clus.util.jeans.io.ini.INIFileNominalOrIntOrVector
 
m_Assign - Variable in class si.ijs.kt.clus.ext.ilevelc.SimpleClusterModel
 
m_Attr - Variable in class si.ijs.kt.clus.data.ClusSchema
 
m_Attr - Variable in class si.ijs.kt.clus.data.io.ClusView
 
m_Attr - Variable in class si.ijs.kt.clus.distance.complex.SetDistance
 
m_Attr - Variable in class si.ijs.kt.clus.distance.complex.TupleDistance
 
m_Attr - Variable in class si.ijs.kt.clus.distance.hierarchies.HierJaccardDistance
 
m_Attr - Variable in class si.ijs.kt.clus.distance.primitive.timeseries.TimeSeriesDist
 
m_Attr - Variable in class si.ijs.kt.clus.ext.ilevelc.ILevelCRandIndex
 
m_Attr - Variable in class si.ijs.kt.clus.ext.structuredTypes.SetStatistic
 
m_Attr - Variable in class si.ijs.kt.clus.ext.structuredTypes.TupleStatistic
 
m_Attr - Variable in class si.ijs.kt.clus.ext.timeseries.TimeSeriesStat
 
m_Attr - Variable in class si.ijs.kt.clus.selection.XValDataSelection
 
m_AttrHeuristic - Variable in class si.ijs.kt.clus.ext.beamsearch.ClusBeamHeuristic
 
m_AttrHeuristic - Variable in class si.ijs.kt.clus.ext.beamsearch.ClusBeamSearch
 
m_AttrHeuristic - Variable in class si.ijs.kt.clus.ext.exhaustivesearch.ClusExhaustiveSearch
 
m_AttributeNames - Variable in class si.ijs.kt.clus.model.processor.ClusEnsemblePredictionWriter
 
m_Attributes - Variable in class si.ijs.kt.clus.distance.ClusDistance
Attribute indices that must be included in distance computations: typically, all descriptive attributes, or nominal descriptive attributes (for sparse data).
m_Attrs - Variable in class si.ijs.kt.clus.algo.tdidt.processor.NodeExampleCollector
 
m_Attrs - Variable in class si.ijs.kt.clus.algo.tdidt.processor.NodeIDWriter
 
m_Attrs - Variable in class si.ijs.kt.clus.error.common.ClusNominalError
 
m_Attrs - Variable in class si.ijs.kt.clus.error.common.ClusNumericError
 
m_Attrs - Variable in class si.ijs.kt.clus.error.common.ClusSetError
 
m_Attrs - Variable in class si.ijs.kt.clus.model.processor.ClusEnsemblePredictionWriter
 
m_Attrs - Variable in class si.ijs.kt.clus.model.processor.PredictionWriter
 
m_Attrs - Variable in class si.ijs.kt.clus.statistic.ClassificationStat
 
m_Attrs - Variable in class si.ijs.kt.clus.statistic.GeneticDistanceStat
 
m_Attrs - Variable in class si.ijs.kt.clus.statistic.RegressionStatBase
 
m_AttrWeighting - Variable in class si.ijs.kt.clus.distance.ClusDistance
 
m_AverageAUPRC - Variable in class si.ijs.kt.clus.error.hmlc.HierErrorMeasures
 
m_AverageAUPRC - Variable in class si.ijs.kt.clus.error.mlc.MLROCAndPRCurve
 
m_AverageAUPRC - Variable in class si.ijs.kt.clus.error.mlcForHmlc.MLROCAndPRCurve
 
m_AverageAUROC - Variable in class si.ijs.kt.clus.error.hmlc.HierErrorMeasures
 
m_AverageAUROC - Variable in class si.ijs.kt.clus.error.mlc.MLROCAndPRCurve
 
m_AverageAUROC - Variable in class si.ijs.kt.clus.error.mlcForHmlc.MLROCAndPRCurve
 
m_AvgAllDistances - Variable in class si.ijs.kt.clus.heuristic.GeneticDistanceHeuristicMatrix
 
m_AvgDistances - Variable in class si.ijs.kt.clus.ext.structuredTypes.SetStatistic
 
m_AvgDistances - Variable in class si.ijs.kt.clus.ext.structuredTypes.TupleStatistic
 
m_AvgDistances - Variable in class si.ijs.kt.clus.ext.timeseries.TimeSeriesStat
 
m_AvgIter - Variable in class si.ijs.kt.clus.ext.ilevelc.COPKMeansModel
 
m_AvgPrecisionAtRecall - Variable in class si.ijs.kt.clus.error.hmlc.HierErrorMeasures
 
m_AvgPredictionsLock - Variable in class si.ijs.kt.clus.ext.ensemble.ClusEnsembleInduceOptimization
 
m_bannedWeights - Variable in class si.ijs.kt.clus.util.tools.optimization.gd.GDProblem
Includes the weights that are banned.
m_baseFuncPredictions - Variable in class si.ijs.kt.clus.util.tools.optimization.OptimizationProblem.OptimizationParameter
 
m_BasicDist - Variable in class si.ijs.kt.clus.heuristic.GISHeuristic
 
m_BasicDist - Variable in class si.ijs.kt.clus.heuristic.rules.ClusRuleHeuristicSSD
 
m_BasicDist - Variable in class si.ijs.kt.clus.heuristic.VarianceReductionHeuristic
 
m_BasicDist - Variable in class si.ijs.kt.clus.heuristic.VarianceReductionHeuristicCompatibility
 
m_Beam - Variable in class si.ijs.kt.clus.ext.beamsearch.ClusBeamSearch
 
m_Beam - Variable in class si.ijs.kt.clus.ext.exhaustivesearch.ClusExhaustiveSearch
 
m_BeamAttrHeuristic - Variable in class si.ijs.kt.clus.main.settings.section.SettingsBeamSearch
 
m_BeamBestN - Variable in class si.ijs.kt.clus.main.settings.section.SettingsBeamSearch
 
m_BeamChanged - Variable in class si.ijs.kt.clus.algo.rules.ClusRuleConstraintInduce
 
m_BeamChanged - Variable in class si.ijs.kt.clus.algo.rules.ClusRuleInduce
 
m_BeamChanged - Variable in class si.ijs.kt.clus.ext.beamsearch.ClusBeamSearch
 
m_BeamChanged - Variable in class si.ijs.kt.clus.ext.exhaustivesearch.ClusExhaustiveSearch
 
m_BeamInduce - Variable in class si.ijs.kt.clus.ext.beamsearch.ClusBeamSearch
 
m_BeamInduce - Variable in class si.ijs.kt.clus.ext.exhaustivesearch.ClusExhaustiveSearch
 
m_BeamModelDistance - Variable in class si.ijs.kt.clus.ext.beamsearch.ClusBeamSearch
 
m_BeamPostPrune - Variable in class si.ijs.kt.clus.main.settings.section.SettingsBeamSearch
 
m_BeamPostPruning - Variable in class si.ijs.kt.clus.ext.beamsearch.ClusBeamSearch
 
m_BeamPostPruning - Variable in class si.ijs.kt.clus.ext.exhaustivesearch.ClusExhaustiveSearch
 
m_BeamSearch - Variable in class si.ijs.kt.clus.main.ClusStatManager
 
m_BeamSimilarity - Variable in class si.ijs.kt.clus.main.settings.section.SettingsBeamSearch
 
m_BeamStats - Variable in class si.ijs.kt.clus.ext.beamsearch.ClusBeamSearch
 
m_BeamStats - Variable in class si.ijs.kt.clus.ext.exhaustivesearch.ClusExhaustiveSearch
 
m_BeamSyntacticConstrFile - Variable in class si.ijs.kt.clus.main.settings.section.SettingsBeamSearch
 
m_BeamSyntConstr - Variable in class si.ijs.kt.clus.ext.beamsearch.ClusBeamSearch
 
m_BeamToForest - Variable in class si.ijs.kt.clus.main.settings.section.SettingsBeamSearch
 
m_BeamWidth - Variable in class si.ijs.kt.clus.main.settings.section.SettingsBeamSearch
 
m_BestC - Variable in class si.ijs.kt.clus.algo.split.CurrentBestTestAndHeuristic
 
m_BestConstraints - Variable in class si.ijs.kt.clus.algo.rules.ClusRuleConstraintInduce
 
m_BestEcc - Variable in class si.ijs.kt.clus.pruning.EncodingCostPruning
 
m_BestHeur - Variable in class si.ijs.kt.clus.algo.rules.ClusRuleConstraintInduce
 
m_BestHeur - Variable in class si.ijs.kt.clus.algo.split.CurrentBestTestAndHeuristic
 
m_BestHeur - Variable in class si.ijs.kt.clus.ext.ilevelc.ILevelCInduce
 
m_BestHeur - Variable in class si.ijs.kt.clus.ext.optiontree.TestAndHeuristic
 
m_BestI - Variable in class si.ijs.kt.clus.algo.split.CurrentBestTestAndHeuristic
 
m_BestLeaf - Variable in class si.ijs.kt.clus.ext.ilevelc.ILevelCInduce
 
m_BestNodeToPrune - Variable in class si.ijs.kt.clus.pruning.EncodingCostPruning
 
m_BestSplit - Variable in class si.ijs.kt.clus.algo.split.CurrentBestTestAndHeuristic
 
m_BestTest - Variable in class si.ijs.kt.clus.algo.rules.ClusRuleConstraintInduce
 
m_BestTest - Variable in class si.ijs.kt.clus.algo.split.CurrentBestTestAndHeuristic
 
m_BestTest - Variable in class si.ijs.kt.clus.algo.split.FindBestTest
 
m_BestTest - Variable in class si.ijs.kt.clus.ext.ilevelc.ILevelCInduce
 
m_BestTreeSoFar - Variable in class si.ijs.kt.clus.pruning.EncodingCostPruning
 
m_BetaI - Variable in class si.ijs.kt.clus.ext.ensemble.ClusBoostingForest
 
m_BitMask - Variable in class si.ijs.kt.clus.data.type.BitwiseNominalAttrType
 
m_BitPosition - Variable in class si.ijs.kt.clus.data.type.BitwiseNominalAttrType
 
m_Bits - Variable in class si.ijs.kt.clus.data.type.BitwiseNominalAttrType
 
m_Bits - Variable in class si.ijs.kt.clus.statistic.BitVectorStat
 
m_BMRemoveEqualHeur - Variable in class si.ijs.kt.clus.main.settings.section.SettingsBeamSearch
 
m_Boolean - Variable in class si.ijs.kt.clus.util.jeans.util.compound.DoubleBoolean
 
m_Bound - Variable in class si.ijs.kt.clus.model.test.ClusRuleConstraintInduceTest
 
m_Bound - Variable in class si.ijs.kt.clus.model.test.NumericTest
 
m_BoundFolds - Variable in class si.ijs.kt.clus.ext.optxval.SoftNumericTest
 
m_Bounds - Variable in class si.ijs.kt.clus.algo.kNN.methods.vpTree.VPNode
 
m_Bounds - Variable in class si.ijs.kt.clus.ext.optxval.SoftNumericTest
 
m_BranchFreq - Variable in class si.ijs.kt.clus.model.test.NodeTest
 
m_BSortTrainParameter - Variable in class si.ijs.kt.clus.main.settings.section.SettingsBeamSearch
 
m_Cache - Variable in class si.ijs.kt.clus.addon.sit.mtLearner.MTLearnerImpl
 
m_CalErr - Variable in class si.ijs.kt.clus.main.settings.section.SettingsHMLC
 
m_Canvas - Variable in class si.ijs.kt.clus.addon.ILevelC.ilevelc.ILevelCGUI
 
m_Cargs - Variable in class si.ijs.kt.clus.addon.hmc.HMCNodeWiseModels.hmcnwmodels.HMCNodeWiseModels
 
m_Center - Variable in class si.ijs.kt.clus.ext.ilevelc.COPKMeansCluster
 
m_Check - Variable in class si.ijs.kt.clus.util.jeans.io.ini.INIFileDouble
 
m_Check - Variable in class si.ijs.kt.clus.util.jeans.io.ini.INIFileInt
 
m_Child - Variable in class si.ijs.kt.clus.error.common.multiscore.MultiScoreWrapper
 
m_ChildDistances - Variable in class si.ijs.kt.clus.distance.complex.ClusStructuredDistance
 
m_Children - Variable in class si.ijs.kt.clus.ext.optiontree.MyNode
 
m_Children - Variable in class si.ijs.kt.clus.util.jeans.tree.MyNode
 
m_ChiSquareInvProb - Variable in class si.ijs.kt.clus.main.ClusStatManager
 
m_Chooser - Variable in class si.ijs.kt.clus.addon.ILevelC.ilevelc.ILevelCGUI
 
m_CL - Variable in class si.ijs.kt.clus.ext.ilevelc.ILevelCHeurStat
 
m_Class - Variable in class si.ijs.kt.clus.addon.ILevelC.ilevelc.ILevelCGUI
 
m_Class - Variable in class si.ijs.kt.clus.algo.rules.tune.FIREROSTune
 
m_Class - Variable in class si.ijs.kt.clus.algo.tdidt.ClusSITDecisionTree
 
m_Class - Variable in class si.ijs.kt.clus.algo.tdidt.tune.CDTTuneFTest
 
m_Class - Variable in class si.ijs.kt.clus.algo.tdidt.tune.CDTuneSizeConstrPruning
 
m_ClassAttr - Variable in class si.ijs.kt.clus.addon.ILevelC.ilevelc.ILevelCGUI
 
m_ClassCounts - Variable in class si.ijs.kt.clus.statistic.ClassificationStat
 
m_ClassList - Variable in class si.ijs.kt.clus.ext.hierarchical.ClassHierarchy
 
m_ClassMap - Variable in class si.ijs.kt.clus.ext.hierarchical.ClassHierarchy
 
m_ClassStat - Variable in class si.ijs.kt.clus.statistic.CombStat
 
m_ClassTerm - Variable in class si.ijs.kt.clus.ext.hierarchical.ClassesValue
 
m_ClassWisePredictions - Variable in class si.ijs.kt.clus.error.hmlc.HierErrorMeasures
 
m_ClassWisePredictions - Variable in class si.ijs.kt.clus.error.mlc.MLROCAndPRCurve
 
m_ClassWisePredictions - Variable in class si.ijs.kt.clus.error.mlcForHmlc.MLROCAndPRCurve
 
m_Closure - Variable in class si.ijs.kt.clus.addon.ILevelC.ilevelc.ILevelCGUI
 
m_Cls - Variable in class si.ijs.kt.clus.addon.hmc.HMCAverageSingleClass.HMCAverageNodeWiseModels
 
m_clss - Variable in class si.ijs.kt.clus.ext.semisupervised.ClusSemiSupervisedClassifier
 
m_Clus - Variable in class si.ijs.kt.clus.addon.hmc.ClusAmandaRules.ClusAmandaRules
 
m_Clus - Variable in class si.ijs.kt.clus.addon.hmc.HMCAverageSingleClass.HMCAverageSingleClass
 
m_Clus - Variable in class si.ijs.kt.clus.addon.hmc.HMCNodeWiseModels.hmcnwmodels.HMCNodeWiseModels
 
m_Clus - Variable in class si.ijs.kt.clus.addon.sit.mtLearner.ClusLearner
 
m_Clus - Variable in class si.ijs.kt.clus.algo.ClusInductionAlgorithmType
 
m_Clus - Variable in class si.ijs.kt.clus.algo.rules.ClusRuleFromTreeInduce
 
m_Clus - Variable in class si.ijs.kt.clus.ext.optxval.OptXVal
Deprecated.
 
m_ClusterID - Variable in class si.ijs.kt.clus.ext.ilevelc.ILevelCStatistic
 
m_ClusterIds - Variable in class si.ijs.kt.clus.heuristic.EncodingCost
 
m_Clustering - Variable in class si.ijs.kt.clus.data.ClusSchema
 
m_Clustering - Variable in class si.ijs.kt.clus.main.settings.section.SettingsAttribute
 
m_ClusteringStat - Variable in class si.ijs.kt.clus.algo.rules.ClusRule
Clustering statistics of examples covered by the rule.
m_ClusteringStat - Variable in class si.ijs.kt.clus.algo.tdidt.ClusNode
 
m_ClusteringStat - Variable in class si.ijs.kt.clus.ext.optiontree.MyNode
 
m_ClusteringWeights - Variable in class si.ijs.kt.clus.algo.split.CurrentBestTestAndHeuristic
 
m_ClusteringWeights - Variable in class si.ijs.kt.clus.ext.optiontree.TestAndHeuristic
 
m_ClusteringWeights - Variable in class si.ijs.kt.clus.heuristic.ClusHeuristic
 
m_ClusteringWeights - Variable in class si.ijs.kt.clus.main.ClusStatManager
 
m_ClusteringWeights - Variable in class si.ijs.kt.clus.main.settings.section.SettingsAttribute
 
m_ClusterMode - Static variable in class si.ijs.kt.clus.main.ClusStatManager
 
m_Clusters - Variable in class si.ijs.kt.clus.ext.ilevelc.COPKMeans
 
m_Clusters - Variable in class si.ijs.kt.clus.ext.ilevelc.COPKMeansModel
 
m_Clusters - Variable in class si.ijs.kt.clus.ext.ilevelc.ILevelCHeurStat
 
m_Coll - Variable in class si.ijs.kt.clus.ext.beamsearch.ClusBeamSearch
 
m_Coll - Variable in class si.ijs.kt.clus.ext.exhaustivesearch.ClusExhaustiveSearch
 
m_Combo - Variable in class si.ijs.kt.clus.addon.ILevelC.ilevelc.ILevelCGUI
 
m_CombStat - Variable in class si.ijs.kt.clus.algo.rules.ClusRule
Combined statistics for training and testing data
m_Comment - Variable in class si.ijs.kt.clus.algo.rules.ClusRuleSet
 
m_Compare - Variable in class si.ijs.kt.clus.ext.ensemble.ClusBoostingForest
 
m_ComplDataIndices - Variable in class si.ijs.kt.clus.heuristic.GeneticDistanceHeuristic
 
m_ComponentErrors - Variable in class si.ijs.kt.clus.ext.ensemble.ClusOOBWeights
 
m_ComponentWeights - Variable in class si.ijs.kt.clus.ext.ensemble.ClusOOBWeights
 
m_ComprTable - Variable in class si.ijs.kt.clus.util.jeans.util.DisjointSetForest
 
m_ComputeSpearman - Variable in class si.ijs.kt.clus.main.settings.section.SettingsOutput
 
m_ConfidenceScores - Variable in class si.ijs.kt.clus.ext.semisupervised.confidence.PredictionConfidence
 
m_Constraint - Variable in class si.ijs.kt.clus.algo.rules.ClusRule
 
m_ConstraintIndex - Variable in class si.ijs.kt.clus.ext.ilevelc.ILevelCHeurStat
 
m_Constraints - Variable in class si.ijs.kt.clus.addon.ILevelC.ilevelc.ILevelCGUI.ILevelCComponent
 
m_Constraints - Variable in class si.ijs.kt.clus.algo.rules.ClusRuleConstraintInduce
 
m_Constraints - Variable in class si.ijs.kt.clus.ext.ilevelc.COPKMeans
 
m_Constraints - Variable in class si.ijs.kt.clus.ext.ilevelc.DerivedConstraintsComputer
 
m_Constraints - Variable in class si.ijs.kt.clus.ext.ilevelc.ILevelCHeurStat
 
m_Constraints - Variable in class si.ijs.kt.clus.ext.ilevelc.ILevelCInduce
 
m_ConstraintsIndex - Variable in class si.ijs.kt.clus.ext.ilevelc.COPKMeans
 
m_ConstraintsIndex - Variable in class si.ijs.kt.clus.ext.ilevelc.ILevelCInduce
 
m_ConstrFile - Variable in class si.ijs.kt.clus.algo.tdidt.ConstraintDFInduce
 
m_ContPred - Variable in class si.ijs.kt.clus.error.hmlc.HierRMSError
 
m_ContTable - Variable in class si.ijs.kt.clus.error.ContingencyTable
 
m_ContTable - Variable in class si.ijs.kt.clus.error.NominalCorrelation
 
m_Correct - Variable in class si.ijs.kt.clus.error.hmlc.HierLevelAccuracy
 
m_CorrectLevel - Variable in class si.ijs.kt.clus.error.hmlc.HierLevelAccuracy
 
m_Count - Variable in class si.ijs.kt.clus.ext.beamsearch.ClusBeamTreeElemOld
 
m_Count - Variable in class si.ijs.kt.clus.ext.hierarchical.ClassesTuple
 
m_Count - Variable in class si.ijs.kt.clus.ext.ilevelc.ILevelCRandIndex
 
m_Count - Variable in class si.ijs.kt.clus.util.jeans.math.SingleStat
 
m_Count - Variable in class si.ijs.kt.clus.util.jeans.util.compound.DoubleBooleanCount
 
m_counter - Variable in class si.ijs.kt.clus.ext.semisupervised.confidence.PredictionConfidence
 
m_CountLevel - Variable in class si.ijs.kt.clus.error.hmlc.HierLevelAccuracy
 
m_Counts - Variable in class si.ijs.kt.clus.selection.BagSelection
 
m_covariances - Variable in class si.ijs.kt.clus.util.tools.optimization.gd.GDProblem
Covariances between weights.
m_cover - Variable in class si.ijs.kt.clus.util.tools.optimization.OptimizationProblem.RulePred
 
m_Coverage - Variable in class si.ijs.kt.clus.algo.rules.ClusRule
Number of examples covered by this rule Index is 0 for train set, 1 for test set
m_CoverageBits - Variable in class si.ijs.kt.clus.algo.rules.ClusRule
Bit vector of covered examples
m_CoverageCorrectBits - Variable in class si.ijs.kt.clus.algo.rules.ClusRule
Bit vector of corretly covered examples
m_CoveredBitVectArray - Variable in class si.ijs.kt.clus.heuristic.rules.ClusRuleHeuristicDispersion
 
m_CrIndex - Variable in class si.ijs.kt.clus.pruning.SizeConstraintPruning
 
m_CrInt - Variable in class si.ijs.kt.clus.util.jeans.util.IntervalCollection
 
m_CrTree - Variable in class si.ijs.kt.clus.pruning.PruneTree
 
m_CrValue - Variable in class si.ijs.kt.clus.data.type.primitive.IndexAttrType
 
m_CSets - Variable in class si.ijs.kt.clus.ext.ilevelc.COPKMeansModel
 
m_cTree - Variable in class si.ijs.kt.clus.ext.exhaustivesearch.ClusExhaustiveDFSearch
 
m_Curr - Variable in class si.ijs.kt.clus.util.jeans.util.list.MyListIter
 
m_CurrentModel - Variable in class si.ijs.kt.clus.ext.beamsearch.ClusBeamSearch
 
m_CurrentModel - Variable in class si.ijs.kt.clus.ext.exhaustivesearch.ClusExhaustiveSearch
 
m_data - Variable in class si.ijs.kt.clus.statistic.ClassificationStat
 
m_Data - Variable in class si.ijs.kt.clus.addon.sit.mtLearner.MTLearnerImpl
 
m_Data - Variable in class si.ijs.kt.clus.addon.sit.Sit
 
m_Data - Variable in class si.ijs.kt.clus.algo.rules.ClusRule
Array of tuples covered by this rule
m_Data - Variable in class si.ijs.kt.clus.algo.rules.ClusRuleConstraintInduce
 
m_Data - Variable in class si.ijs.kt.clus.data.cols.attribute.NominalAttribute
 
m_Data - Variable in class si.ijs.kt.clus.data.cols.attribute.NumericAttribute
 
m_Data - Variable in class si.ijs.kt.clus.data.cols.attribute.TimeSeriesAttribute
 
m_Data - Variable in class si.ijs.kt.clus.data.rows.FileTupleIterator
 
m_Data - Variable in class si.ijs.kt.clus.data.rows.MemoryTupleIterator
 
m_Data - Variable in class si.ijs.kt.clus.ext.ilevelc.COPKMeans
 
m_Data - Variable in class si.ijs.kt.clus.ext.ilevelc.COPKMeansCluster
 
m_Data - Variable in class si.ijs.kt.clus.ext.optxval.OptXValGroup
 
m_Data - Variable in class si.ijs.kt.clus.heuristic.GeneticDistanceHeuristic
 
m_Data - Variable in class si.ijs.kt.clus.heuristic.GISHeuristic
 
m_Data - Variable in class si.ijs.kt.clus.heuristic.rules.ClusRuleHeuristicSSD
 
m_Data - Variable in class si.ijs.kt.clus.heuristic.VarianceReductionHeuristic
 
m_Data - Variable in class si.ijs.kt.clus.heuristic.VarianceReductionHeuristicCompatibility
 
m_Data - Variable in class si.ijs.kt.clus.pruning.BottomUpPruningVSB
 
m_Data - Variable in class si.ijs.kt.clus.pruning.EncodingCostPruning
 
m_Data - Variable in class si.ijs.kt.clus.pruning.SizeConstraintPruning
 
m_Data - Variable in class si.ijs.kt.clus.util.jeans.math.matrix.MSymMatrix
 
m_Data - Variable in class si.ijs.kt.clus.util.jeans.util.sort.DoubleIndexSorter
 
m_dataExample - Variable in class si.ijs.kt.clus.util.tools.optimization.OptimizationProblem.TrueValues
Data tuple this true value is connected.
m_DataIndexes - Variable in class si.ijs.kt.clus.heuristic.rules.ClusRuleHeuristicDispersion
 
m_DataIndexesPerVal - Variable in class si.ijs.kt.clus.heuristic.rules.ClusRuleHeuristicDispersion
 
m_DataIndices - Variable in class si.ijs.kt.clus.heuristic.GeneticDistanceHeuristic
 
m_DataIndices - Variable in class si.ijs.kt.clus.heuristic.GISHeuristic
 
m_DataIndices - Variable in class si.ijs.kt.clus.heuristic.VarianceReductionHeuristicCompatibility
 
m_DataLine - Variable in class si.ijs.kt.clus.data.io.ARFFFile
 
m_DataSet - Variable in class si.ijs.kt.clus.addon.hmc.HMCAverageSingleClass.HMCAverageTreeModel
 
m_Date - Variable in class si.ijs.kt.clus.main.settings.section.SettingsGeneric
Generic information *
m_Debug - Variable in class si.ijs.kt.clus.algo.kNN.methods.SearchAlgorithm
 
m_Debug - Variable in class si.ijs.kt.clus.ext.beamsearch.ClusBeamSizeConstraints
 
m_Default - Variable in class si.ijs.kt.clus.error.common.ClusNominalError
 
m_Default - Variable in class si.ijs.kt.clus.util.jeans.util.IntervalCollection
 
m_DefaultData - Variable in class si.ijs.kt.clus.algo.rules.ClusRuleSet
Array of tuples covered by the default rule.
m_DefinitionFile - Variable in class si.ijs.kt.clus.main.settings.section.SettingsHMLC
 
m_Depth - Variable in class si.ijs.kt.clus.ext.hierarchical.ClassTerm
Depth of the term in the hierarchy.
m_Descriptive - Variable in class si.ijs.kt.clus.data.ClusSchema
 
m_Descriptive - Variable in class si.ijs.kt.clus.main.settings.section.SettingsAttribute
 
m_DFirst - Variable in class si.ijs.kt.clus.ext.optxval.OptXValInduce
 
m_Dim - Variable in class si.ijs.kt.clus.error.common.ClusError
Number of dimensions to compute the error for
m_DirName - Variable in class si.ijs.kt.clus.main.settings.section.SettingsGeneric
 
m_Disabled - Variable in class si.ijs.kt.clus.data.ClusSchema
 
m_Disabled - Variable in class si.ijs.kt.clus.main.settings.section.SettingsAttribute
 
m_DiscrMean - Variable in class si.ijs.kt.clus.statistic.WHTDStatistic
 
m_DispersionWeights - Variable in class si.ijs.kt.clus.main.ClusStatManager
 
m_Dist - Variable in class si.ijs.kt.clus.error.ICVPairwiseDistancesError
 
m_Distance - Variable in class si.ijs.kt.clus.error.AvgDistancesError
 
m_Distance - Variable in class si.ijs.kt.clus.statistic.SumPairwiseDistancesStat
 
m_Distance - Variable in class si.ijs.kt.clus.statistic.WHTDStatistic
 
m_distances - Static variable in class si.ijs.kt.clus.heuristic.GISHeuristic
 
m_distances - Static variable in class si.ijs.kt.clus.heuristic.VarianceReductionHeuristicCompatibility
 
m_distancesN - Static variable in class si.ijs.kt.clus.heuristic.GISHeuristic
 
m_distancesN - Static variable in class si.ijs.kt.clus.heuristic.VarianceReductionHeuristicCompatibility
 
m_distancesS - Static variable in class si.ijs.kt.clus.heuristic.GISHeuristic
 
m_distancesS - Static variable in class si.ijs.kt.clus.heuristic.VarianceReductionHeuristicCompatibility
 
m_DistanceToBeam - Variable in class si.ijs.kt.clus.ext.beamsearch.ClusBeamModel
 
m_DistMatrix - Variable in class si.ijs.kt.clus.heuristic.GeneticDistanceHeuristicMatrix
 
m_Done - Variable in class si.ijs.kt.clus.util.jeans.util.IntervalCollection
 
m_Double - Variable in class si.ijs.kt.clus.util.jeans.io.ini.INIFileStringOrDouble
 
m_Double - Variable in class si.ijs.kt.clus.util.jeans.util.compound.DoubleBoolean
 
m_Double - Variable in class si.ijs.kt.clus.util.jeans.util.compound.DoubleObject
 
m_Doubles - Variable in class si.ijs.kt.clus.data.rows.DataTuple
Numeric attributes of the tuple.
m_DummyTypes - Variable in class si.ijs.kt.clus.ext.hierarchical.ClassHierarchy
 
m_Duration - Variable in class si.ijs.kt.clus.heuristic.EncodingCost
 
m_earlyStopProbl - Variable in class si.ijs.kt.clus.util.tools.optimization.gd.GDProblem
New problem for computing fitness function with the early stop data
m_earlyStopStep - Variable in class si.ijs.kt.clus.util.tools.optimization.gd.GDAlgorithm
After how many steps check if early stopping is ok already
m_earlyStopStepsizeReducedNb - Variable in class si.ijs.kt.clus.util.tools.optimization.gd.GDAlgorithm
After finding the early stop, how many times we have tried to reduce the step size
m_EC - Variable in class si.ijs.kt.clus.pruning.EncodingCostPruning
 
m_Ecc - Variable in class si.ijs.kt.clus.pruning.EncodingCostPruning
 
m_EccGain - Variable in class si.ijs.kt.clus.pruning.EncodingCostPruning
 
m_Efficiency - Variable in class si.ijs.kt.clus.statistic.SumPairwiseDistancesStat
 
m_Elements - Variable in class si.ijs.kt.clus.selection.XValGroup
 
m_Enable - Variable in class si.ijs.kt.clus.util.jeans.io.MyFile
 
m_Enabled - Variable in class si.ijs.kt.clus.util.jeans.io.ini.INIFileNode
 
m_EnsembleROSInfo - Variable in class si.ijs.kt.clus.ext.ensemble.ClusEnsembleInduceOptimization
For ROS ensembles
m_EnsembleVotingType - Variable in class si.ijs.kt.clus.ext.ensemble.ClusOOBWeights
 
m_EnsPredSchema - Variable in class si.ijs.kt.clus.model.processor.ClusEnsemblePredictionWriter
 
m_Error - Variable in class si.ijs.kt.clus.error.common.ClusErrorList
 
m_Error - Variable in class si.ijs.kt.clus.main.settings.section.SettingsSIT
 
m_Error - Variable in class si.ijs.kt.clus.pruning.SequencePruningVSB
 
m_ErrorMeasure - Variable in class si.ijs.kt.clus.pruning.CartPruning
 
m_ErrorMeasure - Variable in class si.ijs.kt.clus.pruning.SizeConstraintPruning
 
m_Errors - Variable in class si.ijs.kt.clus.algo.rules.ClusRule
 
m_Errors - Variable in class si.ijs.kt.clus.error.ClusSumError
 
m_ErrorWithNulls - Variable in class si.ijs.kt.clus.error.common.ClusErrorList
 
m_Eval - Variable in class si.ijs.kt.clus.ext.hierarchical.ClassHierarchy
Classes to be evaluated at the end, ignoring hierarchy
m_EvalArray - Variable in class si.ijs.kt.clus.addon.hmc.HMCAverageSingleClass.HMCAverageSingleClass
 
m_EvalClass - Variable in class si.ijs.kt.clus.error.hmlc.HierClassWiseAccuracy
 
m_EvalClass - Variable in class si.ijs.kt.clus.error.hmlc.HierErrorMeasures
 
m_EvalClass - Variable in class si.ijs.kt.clus.error.mlcForHmlc.MlcMeasuresForHmlc
 
m_Examples - Variable in class si.ijs.kt.clus.data.type.primitive.SparseNumericAttrType
 
m_ExampleWeight - Variable in class si.ijs.kt.clus.data.type.primitive.SparseNumericAttrType
 
m_Exhaustive - Variable in class si.ijs.kt.clus.main.settings.section.SettingsExhaustiveSearch
Section: Exhaustive search *
m_Exs - Variable in class si.ijs.kt.clus.ext.ilevelc.ILevelCRandIndex
 
m_ExtendPR - Variable in class si.ijs.kt.clus.error.mlc.MLROCAndPRCurve
 
m_ExtendPR - Variable in class si.ijs.kt.clus.error.mlcForHmlc.MLROCAndPRCurve
 
m_ExtendPR - Variable in class si.ijs.kt.clus.error.ROCAndPRCurve
 
m_ExtraErr - Variable in class si.ijs.kt.clus.model.ClusModelInfo
 
m_F1Sum - Variable in class si.ijs.kt.clus.error.mlc.MLFOneMeasure
 
m_FastBS - Variable in class si.ijs.kt.clus.main.settings.section.SettingsBeamSearch
 
m_FeatureRanking - Variable in class si.ijs.kt.clus.ext.featureRanking.relief.ReliefInduce
 
m_File - Variable in class si.ijs.kt.clus.data.rows.DiskTupleIterator
 
m_FileTestSet - Variable in class si.ijs.kt.clus.main.ClusRun
 
m_FillIn - Variable in class si.ijs.kt.clus.algo.tdidt.ConstraintDFInduce
 
m_FimpTableHeader - Variable in class si.ijs.kt.clus.ext.featureRanking.ClusFeatureRanking
Header for the table of relevances in the .fimp file
m_FinalMemory - Static variable in class si.ijs.kt.clus.main.ClusStat
 
m_Find_MinMax - Variable in class si.ijs.kt.clus.algo.tdidt.DepthFirstInduce
 
m_FindBestTest - Variable in class si.ijs.kt.clus.algo.rules.ClusRuleConstraintInduce
 
m_FindBestTest - Variable in class si.ijs.kt.clus.algo.rules.ClusRuleInduce
 
m_FindBestTest - Variable in class si.ijs.kt.clus.algo.tdidt.DepthFirstInduce
 
m_FindBestTest - Variable in class si.ijs.kt.clus.ext.bestfirst.BestFirstInduce
 
m_FindBestTests - Variable in class si.ijs.kt.clus.ext.optiontree.DepthFirstInduceWithOptions
 
m_Finished - Variable in class si.ijs.kt.clus.ext.beamsearch.ClusBeamModel
 
m_First - Variable in class si.ijs.kt.clus.algo.tdidt.processor.NodeIDWriter
 
m_FirstIndex - Variable in class si.ijs.kt.clus.addon.ILevelC.ilevelc.ILevelCGUI.ILevelCComponent
 
m_Fitness - Variable in class si.ijs.kt.clus.util.tools.optimization.de.DEIndividual
Fitness of this DE individual.
m_Fname - Variable in class si.ijs.kt.clus.algo.tdidt.processor.NodeIDWriter
 
m_Fname - Variable in class si.ijs.kt.clus.main.ClusOutput
 
m_Fname - Variable in class si.ijs.kt.clus.model.processor.ClusEnsemblePredictionWriter
 
m_Fname - Variable in class si.ijs.kt.clus.model.processor.PredictionWriter
 
m_FName - Variable in class si.ijs.kt.clus.algo.tdidt.processor.NodeExampleCollector
 
m_Fold - Variable in class si.ijs.kt.clus.selection.XValSelection
 
m_Folds - Variable in class si.ijs.kt.clus.data.rows.DataTuple
Hack for efficient xval, should be replaced later.
m_Folds - Variable in class si.ijs.kt.clus.ext.optxval.OptXValGroup
 
m_Folds - Variable in class si.ijs.kt.clus.ext.optxval.OptXValNode
 
m_Folds - Variable in class si.ijs.kt.clus.ext.optxval.OptXValSplit
 
m_Folds - Variable in class si.ijs.kt.clus.ext.optxval.SoftNumericTest
 
m_FoldsMean - Variable in class si.ijs.kt.clus.ext.timeseries.TimeSeriesSignificantChangeTesterXVAL
 
m_FoldsMedoid - Variable in class si.ijs.kt.clus.ext.timeseries.TimeSeriesSignificantChangeTesterXVAL
 
m_Format - Variable in class si.ijs.kt.clus.model.processor.ClusEnsemblePredictionWriter
 
m_FTests - Variable in class si.ijs.kt.clus.addon.hmc.HMCNodeWiseModels.hmcnwmodels.HMCNodeWiseModels
 
m_FTests - Variable in class si.ijs.kt.clus.algo.tdidt.tune.CDTTuneFTest
 
m_GainRatio - Variable in class si.ijs.kt.clus.heuristic.GainHeuristic
 
m_GainRatio - Variable in class si.ijs.kt.clus.heuristic.GISHeuristic
 
m_Gamma - Variable in class si.ijs.kt.clus.algo.rules.ClusRuleConstraintInduce
 
m_GIS - Variable in class si.ijs.kt.clus.data.ClusSchema
 
m_GIS - Variable in class si.ijs.kt.clus.main.settings.section.SettingsAttribute
 
m_Global - Variable in class si.ijs.kt.clus.algo.rules.ClusCalcRuleErrorProc
 
m_Global - Variable in class si.ijs.kt.clus.model.processor.PredictionWriter
 
m_Global - Variable in class si.ijs.kt.clus.statistic.WHTDStatistic
 
m_GlobalSS - Variable in class si.ijs.kt.clus.ext.ilevelc.ILevelCInduce
 
m_gradients - Variable in class si.ijs.kt.clus.util.tools.optimization.gd.GDProblem
Computed negative gradient averages for each of the dimensions [iWeight]
m_Graph - Variable in class si.ijs.kt.clus.algo.tdidt.tune.CDTuneSizeConstrPruning
 
m_GzipOutput - Variable in class si.ijs.kt.clus.main.settings.section.SettingsOutput
 
m_hArray - Variable in class si.ijs.kt.clus.util.jeans.util.array.MDoubleArray
 
m_hArray - Variable in class si.ijs.kt.clus.util.jeans.util.array.MIntArray
 
m_Hash - Variable in class si.ijs.kt.clus.data.type.primitive.NominalAttrType
 
m_Hash - Variable in class si.ijs.kt.clus.ext.hierarchical.ClassTerm
 
m_HashCode - Variable in class si.ijs.kt.clus.ext.beamsearch.ClusBeamModel
 
m_HasMissing - Variable in class si.ijs.kt.clus.algo.tdidt.tune.CDTuneSizeConstrPruning
 
m_HasMissing - Variable in class si.ijs.kt.clus.pruning.SequencePruningVSB
 
m_HasName - Variable in class si.ijs.kt.clus.model.ClusModelInfo
 
m_HasRuleErrors - Variable in class si.ijs.kt.clus.algo.rules.ClusRuleSet
 
m_hEntries - Variable in class si.ijs.kt.clus.util.jeans.io.ini.INIFileSection
 
m_hEntryList - Variable in class si.ijs.kt.clus.util.jeans.io.ini.INIFileSection
 
m_HeurComputed - Variable in class si.ijs.kt.clus.heuristic.GeneticDistanceHeuristicMatrix
 
m_Heuristic - Variable in class si.ijs.kt.clus.algo.rules.ClusRuleConstraintInduce
 
m_Heuristic - Variable in class si.ijs.kt.clus.algo.rules.ClusRuleInduce
 
m_Heuristic - Variable in class si.ijs.kt.clus.algo.split.CurrentBestTestAndHeuristic
 
m_Heuristic - Variable in class si.ijs.kt.clus.ext.beamsearch.ClusBeamSearch
 
m_Heuristic - Variable in class si.ijs.kt.clus.ext.exhaustivesearch.ClusExhaustiveSearch
 
m_Heuristic - Variable in class si.ijs.kt.clus.ext.optiontree.TestAndHeuristic
 
m_Heuristic - Variable in class si.ijs.kt.clus.ext.optxval.OptXValInduce
 
m_Heuristic - Variable in class si.ijs.kt.clus.main.ClusStatManager
 
m_HeurTimer - Variable in class si.ijs.kt.clus.heuristic.GeneticDistanceHeuristicMatrix
 
m_Hier - Variable in class si.ijs.kt.clus.data.type.hierarchies.ClassesAttrType
 
m_Hier - Variable in class si.ijs.kt.clus.error.hmlc.HierClassWiseAccuracy
 
m_Hier - Variable in class si.ijs.kt.clus.error.hmlc.HierErrorMeasures
 
m_Hier - Variable in class si.ijs.kt.clus.error.hmlc.HierLevelAccuracy
 
m_Hier - Variable in class si.ijs.kt.clus.error.hmlc.HierRMSError
 
m_Hier - Variable in class si.ijs.kt.clus.error.mlcForHmlc.MlcMeasuresForHmlc
 
m_Hier - Variable in class si.ijs.kt.clus.main.ClusStatManager
 
m_Hier - Variable in class si.ijs.kt.clus.statistic.WHTDStatistic
 
m_HierClassThreshold - Variable in class si.ijs.kt.clus.main.settings.section.SettingsHMLC
 
m_HierDistance - Variable in class si.ijs.kt.clus.main.settings.section.SettingsHMLC
 
m_HierEmptySetIndicator - Variable in class si.ijs.kt.clus.main.settings.section.SettingsHMLC
 
m_HierEvalClasses - Variable in class si.ijs.kt.clus.main.settings.section.SettingsHMLC
 
m_HierNoRootPreds - Variable in class si.ijs.kt.clus.main.settings.section.SettingsHMLC
 
m_HierOptimizeErrorMeasure - Variable in class si.ijs.kt.clus.main.settings.section.SettingsHMLC
 
m_HierPruneInSig - Variable in class si.ijs.kt.clus.main.settings.section.SettingsHMLC
 
m_HierSep - Variable in class si.ijs.kt.clus.main.settings.section.SettingsHMLC
 
m_HierSingleLabel - Variable in class si.ijs.kt.clus.main.settings.section.SettingsHMLC
 
m_HierStat - Variable in class si.ijs.kt.clus.statistic.CombStatClassRegHier
 
m_HierType - Variable in class si.ijs.kt.clus.ext.hierarchical.ClassHierarchy
 
m_HierType - Variable in class si.ijs.kt.clus.main.settings.section.SettingsHMLC
 
m_HierUseBonferroni - Variable in class si.ijs.kt.clus.main.settings.section.SettingsHMLC
 
m_HierUseMEstimate - Static variable in class si.ijs.kt.clus.main.settings.section.SettingsHMLC
 
m_HierWParam - Variable in class si.ijs.kt.clus.main.settings.section.SettingsHMLC
 
m_HierWType - Variable in class si.ijs.kt.clus.main.settings.section.SettingsHMLC
 
m_hInstance - Static variable in class si.ijs.kt.clus.util.jeans.util.sort.MStringSorter
 
m_History - Variable in class si.ijs.kt.clus.algo.kNN.methods.vpTree.VPItem
 
m_HMTRHier - Variable in class si.ijs.kt.clus.main.ClusStatManager
 
m_HMTRType - Static variable in class si.ijs.kt.clus.main.settings.section.SettingsHMTR
 
m_hName - Variable in class si.ijs.kt.clus.util.jeans.io.ini.INIFileNode
 
m_hParent - Variable in class si.ijs.kt.clus.util.jeans.io.ini.INIFileNode
 
m_hPrototype - Variable in class si.ijs.kt.clus.util.jeans.io.ini.INIFileSectionGroup
 
m_hSections - Variable in class si.ijs.kt.clus.util.jeans.io.ini.INIFileSectionGroup
 
m_hValue - Variable in class si.ijs.kt.clus.util.jeans.io.ini.INIFileArray
 
m_I - Variable in class si.ijs.kt.clus.statistic.ClassificationStat
 
m_ID - Variable in class si.ijs.kt.clus.algo.rules.ClusRule
 
m_ID - Variable in class si.ijs.kt.clus.algo.tdidt.ClusNode
 
m_ID - Variable in class si.ijs.kt.clus.ext.hierarchical.ClassTerm
 
m_IE - Variable in class si.ijs.kt.clus.ext.ilevelc.ILevelCHeurStat
 
m_ILevelCAlpha - Variable in class si.ijs.kt.clus.main.settings.section.SettingsILevelC
 
m_ILevelCCOPKMeans - Variable in class si.ijs.kt.clus.main.settings.section.SettingsILevelC
 
m_ILevelCFile - Variable in class si.ijs.kt.clus.main.settings.section.SettingsILevelC
Section: Instance level constraints *
m_ILevelCMPCKMeans - Variable in class si.ijs.kt.clus.main.settings.section.SettingsILevelC
 
m_ILevelNbRandomConstr - Variable in class si.ijs.kt.clus.main.settings.section.SettingsILevelC
 
m_Illegal - Variable in class si.ijs.kt.clus.ext.ilevelc.COPKMeansModel
 
m_implicitLinearTerms - Variable in class si.ijs.kt.clus.util.tools.optimization.OptimizationProblem.OptimizationParameter
 
m_Index - Variable in class si.ijs.kt.clus.data.cols.attribute.NominalTarget
 
m_Index - Variable in class si.ijs.kt.clus.data.cols.attribute.NumericAttribute
 
m_Index - Variable in class si.ijs.kt.clus.data.cols.attribute.NumericTarget
 
m_Index - Variable in class si.ijs.kt.clus.data.cols.attribute.TimeSeriesTarget
 
m_Index - Variable in class si.ijs.kt.clus.data.rows.DataTuple
Unknown
m_Index - Variable in class si.ijs.kt.clus.data.rows.MemoryTupleIterator
 
m_Index - Variable in class si.ijs.kt.clus.data.rows.RowData
 
m_Index - Variable in class si.ijs.kt.clus.data.type.ClusAttrType
 
m_Index - Variable in class si.ijs.kt.clus.data.type.primitive.IndexAttrType
 
m_Index - Variable in class si.ijs.kt.clus.data.type.primitive.IntegerAttrType.MySerializable
 
m_Index - Variable in class si.ijs.kt.clus.ext.ilevelc.COPKMeansCluster
 
m_Index - Variable in class si.ijs.kt.clus.main.ClusRun
 
m_Index - Variable in class si.ijs.kt.clus.model.test.NominalTest
 
m_Index - Variable in class si.ijs.kt.clus.util.jeans.io.ini.INIFileSection
 
m_Index - Variable in class si.ijs.kt.clus.util.jeans.util.array.MDoubleArrayComparator
 
m_Index - Variable in class si.ijs.kt.clus.util.jeans.util.compound.IndexedItem
 
m_Index - Variable in class si.ijs.kt.clus.util.jeans.util.sort.DoubleIndexSorter
 
m_Inds - Variable in class si.ijs.kt.clus.util.tools.optimization.de.DEPopulation
 
m_IndTime - Variable in class si.ijs.kt.clus.main.ClusModelInfoList
 
m_IndTimeSequential - Variable in class si.ijs.kt.clus.main.ClusModelInfoList
 
m_Induce - Variable in class si.ijs.kt.clus.ext.beamsearch.ClusBeamSearch
 
m_Induce - Variable in class si.ijs.kt.clus.ext.exhaustivesearch.ClusExhaustiveSearch
 
m_Init - Variable in class si.ijs.kt.clus.data.rows.DiskTupleIterator
 
m_Initialized - Variable in class si.ijs.kt.clus.model.processor.PredictionWriter
 
m_InitialMemory - Static variable in class si.ijs.kt.clus.main.ClusStat
 
m_Instance - Static variable in class si.ijs.kt.clus.ext.constraint.ClusConstraintFile
 
m_Instance - Static variable in class si.ijs.kt.clus.statistic.StatisticPrintInfo
 
m_Instance - Static variable in class si.ijs.kt.clus.util.jeans.util.sort.DoubleIndexSorter
 
m_Int - Variable in class si.ijs.kt.clus.util.jeans.io.ini.INIFileStringOrInt
 
m_Int - Variable in class si.ijs.kt.clus.util.jeans.util.compound.IntObject
 
m_Intermediate - Variable in class si.ijs.kt.clus.ext.hierarchical.ClassesValue
 
m_Intermediates - Variable in class si.ijs.kt.clus.ext.hierarchical.ClassHierarchyPreproc
 
m_Interval - Variable in class si.ijs.kt.clus.util.jeans.util.IntervalCollection
 
m_IntIndex - Variable in class si.ijs.kt.clus.data.type.primitive.SparseNumericAttrType
 
m_Ints - Variable in class si.ijs.kt.clus.data.rows.DataTuple
Nominal attributes of the tuple.
m_Invalid - Variable in class si.ijs.kt.clus.ext.ilevelc.ILevelCRandIndex
 
m_IsAcceptable - Variable in class si.ijs.kt.clus.algo.split.CurrentBestTestAndHeuristic
 
m_IsAcceptable - Variable in class si.ijs.kt.clus.ext.optiontree.TestAndHeuristic
 
m_IsClustering - Variable in class si.ijs.kt.clus.data.type.ClusAttrType
 
m_IsComputed - Variable in class si.ijs.kt.clus.ext.ilevelc.ILevelCRandIndex
 
m_isCovComputed - Variable in class si.ijs.kt.clus.util.tools.optimization.gd.GDProblem
Is covariance computed for this dimension? To reduce computational costs, covariances for certain dimension are computed only if needed Weight is always zero if the corresponding coefficient is zero.
m_IsDescriptive - Variable in class si.ijs.kt.clus.data.type.ClusAttrType
 
m_IsDouble - Variable in class si.ijs.kt.clus.util.jeans.io.ini.INIFileStringOrDouble
 
m_IsEnsembleRanking - Variable in class si.ijs.kt.clus.ext.featureRanking.ClusFeatureRanking
 
m_isEqualLength - Static variable in class si.ijs.kt.clus.data.type.complex.SetAttrType
 
m_isEqualLength - Static variable in class si.ijs.kt.clus.data.type.primitive.TimeSeriesAttrType
 
m_IsInt - Variable in class si.ijs.kt.clus.util.jeans.io.ini.INIFileStringOrInt
 
m_IsLocked - Variable in class si.ijs.kt.clus.ext.hierarchical.ClassHierarchy
 
m_IsModified - Variable in class si.ijs.kt.clus.ext.beamsearch.ClusBeamSizeConstraints
 
m_IsMSENominal - Variable in class si.ijs.kt.clus.pruning.CartPruning
 
m_IsPreset - Static variable in class si.ijs.kt.clus.util.ClusRandom
 
m_IsSet - Variable in class si.ijs.kt.clus.util.jeans.io.ini.INIFileNominal
 
m_IsSinglePass - Variable in class si.ijs.kt.clus.ext.hierarchical.ClassHierarchyPreproc
 
m_IsSoft - Variable in class si.ijs.kt.clus.ext.optxval.OptXValGroup
 
m_IsSparse - Variable in class si.ijs.kt.clus.data.ClusSchema
 
m_IsSparse - Variable in class si.ijs.kt.clus.distance.ClusDistance
 
m_isWeightNonZero - Variable in class si.ijs.kt.clus.util.tools.optimization.gd.GDProblem
Is the weight nonzero for this run.
m_Iterations - Variable in class si.ijs.kt.clus.ext.ilevelc.COPKMeansModel
 
m_iType - Variable in class si.ijs.kt.clus.util.jeans.io.ini.INIFileArray
 
m_JaccardSum - Variable in class si.ijs.kt.clus.error.mlc.MLAccuracy
 
m_K - Variable in class si.ijs.kt.clus.ext.ilevelc.COPKMeans
 
m_K - Variable in class si.ijs.kt.clus.ext.ilevelc.COPKMeansModel
 
m_Key - Variable in class si.ijs.kt.clus.data.ClusSchema
 
m_Key - Variable in class si.ijs.kt.clus.main.settings.section.SettingsAttribute
 
m_Labels - Variable in class si.ijs.kt.clus.data.type.hierarchies.ClassesAttrType
 
m_Last - Variable in class si.ijs.kt.clus.util.jeans.util.list.MyListIter
 
m_LeafCount - Variable in class si.ijs.kt.clus.ext.beamsearch.ClusBeamSizeConstraints
 
m_LeafTuples - Variable in class si.ijs.kt.clus.algo.tdidt.ClusNode
 
m_Learner - Variable in class si.ijs.kt.clus.addon.sit.Sit
 
m_Learner - Variable in class si.ijs.kt.clus.main.settings.section.SettingsSIT
 
m_LeftSubTree - Variable in class si.ijs.kt.clus.algo.kNN.methods.kdTree.KDNode
 
m_LeftSubTree - Variable in class si.ijs.kt.clus.algo.kNN.methods.vpTree.VPNode
 
m_Level - Variable in class si.ijs.kt.clus.algo.kNN.methods.kdTree.KDNode
 
m_LibLoaded - Static variable in class si.ijs.kt.clus.util.ResourceInfo
 
m_Line - Variable in class si.ijs.kt.clus.model.test.FakeTest
 
m_Lines - Variable in class si.ijs.kt.clus.model.test.FakeTest
 
m_ListTest - Variable in class si.ijs.kt.clus.algo.kNN.methods.bfMethod.BruteForce
 
m_ListTrain - Variable in class si.ijs.kt.clus.algo.kNN.methods.bfMethod.BruteForce
 
m_lLen - Variable in class si.ijs.kt.clus.util.jeans.util.array.MDoubleArray
 
m_lLen - Variable in class si.ijs.kt.clus.util.jeans.util.array.MIntArray
 
M_LN2 - Static variable in class si.ijs.kt.clus.util.jeans.math.MathUtil
 
m_Load - Variable in class si.ijs.kt.clus.addon.ILevelC.ilevelc.ILevelCGUI
 
m_LoadedMemory - Static variable in class si.ijs.kt.clus.main.ClusStat
 
m_LoadFromModelFile - Variable in class si.ijs.kt.clus.main.settings.section.SettingsModel
 
m_LogGammaAlpha - Variable in class si.ijs.kt.clus.heuristic.EncodingCost
 
m_LogPMatrix - Variable in class si.ijs.kt.clus.heuristic.EncodingCost
 
m_Lookup - Variable in class si.ijs.kt.clus.util.jeans.io.range.NominalType
 
m_lSize - Variable in class si.ijs.kt.clus.util.jeans.util.array.MDoubleArray
 
m_lSize - Variable in class si.ijs.kt.clus.util.jeans.util.array.MIntArray
 
m_MainTarget - Variable in class si.ijs.kt.clus.addon.sit.mtLearner.MTLearnerImpl
 
m_MainTarget - Variable in class si.ijs.kt.clus.main.settings.section.SettingsSIT
Section: Selective inductive transfer *
m_MajorityClasses - Variable in class si.ijs.kt.clus.statistic.ClassificationStat
 
m_Manager - Variable in class si.ijs.kt.clus.ext.ilevelc.MPCKMeansWrapper
 
m_Manager - Variable in class si.ijs.kt.clus.ext.ilevelc.SimpleClusterModel
 
m_Manager - Variable in class si.ijs.kt.clus.model.ClusModelInfo
 
m_Map - Variable in class si.ijs.kt.clus.data.rows.SparseDataTuple
 
m_Map - Variable in class si.ijs.kt.clus.util.jeans.util.DisjointSetForest
 
m_Mappings - Variable in class si.ijs.kt.clus.addon.hmc.HMCNodeWiseModels.hmcnwmodels.HMCNodeWiseModels
 
m_Matrix - Variable in class si.ijs.kt.clus.distance.complex.tuples.SSPDMatrix
 
m_Max - Variable in class si.ijs.kt.clus.data.type.primitive.IndexAttrType
 
m_Max - Variable in class si.ijs.kt.clus.util.jeans.math.SingleStat
 
m_MaxDepth - Variable in class si.ijs.kt.clus.error.hmlc.HierLevelAccuracy
 
m_MaxDepth - Variable in class si.ijs.kt.clus.ext.hierarchical.ClassHierarchy
 
m_MaxDepth - Variable in class si.ijs.kt.clus.ext.hierarchical.ClassTerm
Maximal depth of the parents
m_MaxDouble - Variable in class si.ijs.kt.clus.util.jeans.io.range.DoubleRangeCheck
 
m_MaxError - Variable in class si.ijs.kt.clus.ext.exhaustivesearch.ClusExhaustiveSearch
 
m_MaxError - Variable in class si.ijs.kt.clus.pruning.SizeConstraintPruning
 
m_MaxIndex - Variable in class si.ijs.kt.clus.pruning.SizeConstraintPruning
 
m_MaxInt - Variable in class si.ijs.kt.clus.util.jeans.io.range.IntRangeCheck
 
m_MaxNbClasses - Variable in class si.ijs.kt.clus.ext.ilevelc.ILevelCInduce
 
m_MaxSize - Variable in class si.ijs.kt.clus.algo.tdidt.tune.CDTuneSizeConstrPruning
 
m_MaxSize - Variable in class si.ijs.kt.clus.pruning.CartPruning
 
m_MaxSize - Variable in class si.ijs.kt.clus.pruning.SizeConstraintPruning
 
m_MaxSplits - Variable in class si.ijs.kt.clus.ext.optiontree.FindBestTests
 
m_MaxStats - Variable in class si.ijs.kt.clus.algo.split.FindBestTest
 
m_MaxStats - Variable in class si.ijs.kt.clus.ext.optiontree.FindBestTests
 
m_MaxStats - Variable in class si.ijs.kt.clus.ext.optxval.OptXValInduce
 
m_MaxTreeSize - Variable in class si.ijs.kt.clus.ext.beamsearch.ClusBeamSearch
 
m_MaxTreeSize - Variable in class si.ijs.kt.clus.ext.exhaustivesearch.ClusExhaustiveSearch
 
m_MaxTuples - Variable in class si.ijs.kt.clus.algo.kNN.methods.kdTree.KDTree
 
m_Means - Variable in class si.ijs.kt.clus.statistic.RegressionStatBase
 
m_MeanValues - Variable in class si.ijs.kt.clus.error.common.multiscore.MultiScoreStat
 
m_Measure - Variable in class si.ijs.kt.clus.error.mlc.MLaverageAUPRC
 
m_Measure - Variable in class si.ijs.kt.clus.error.mlc.MLaverageAUROC
 
m_Measure - Variable in class si.ijs.kt.clus.error.mlc.MLweightedAUPRC
 
m_Median - Variable in class si.ijs.kt.clus.algo.kNN.methods.vpTree.VPNode
 
m_MEstimate - Variable in class si.ijs.kt.clus.main.settings.section.SettingsNominal
Section: Nominal - Should move? *
m_Mgr - Variable in class si.ijs.kt.clus.ext.ilevelc.COPKMeans
 
m_Mgr - Variable in class si.ijs.kt.clus.ext.ilevelc.COPKMeansCluster
 
m_Mimic - Variable in class si.ijs.kt.clus.data.type.hierarchies.FlatClassesAttrType
 
m_Min - Variable in class si.ijs.kt.clus.data.type.primitive.IndexAttrType
 
m_Min - Variable in class si.ijs.kt.clus.util.jeans.math.SingleStat
 
m_MinDepth - Variable in class si.ijs.kt.clus.ext.hierarchical.ClassTerm
Minimal depth of the parents
m_MinDouble - Variable in class si.ijs.kt.clus.util.jeans.io.range.DoubleRangeCheck
 
m_MinExamples - Variable in class si.ijs.kt.clus.heuristic.stopCriterion.ClusStopCriterionMinNbExamples
 
m_minFitness - Variable in class si.ijs.kt.clus.util.tools.optimization.gd.GDProblem
List of old fitnesses for plateau detection (andy for debugging)
m_minFitWeights - Variable in class si.ijs.kt.clus.util.tools.optimization.gd.GDProblem
Weights when the Fitness was minimum
m_MinInt - Variable in class si.ijs.kt.clus.util.jeans.io.range.IntRangeCheck
 
m_MinKnownW - Variable in class si.ijs.kt.clus.main.settings.section.SettingsModel
 
m_MinLeafWeight - Variable in class si.ijs.kt.clus.ext.ilevelc.ILevelCInduce
 
m_MinNbEx - Variable in class si.ijs.kt.clus.main.settings.section.SettingsModel
 
m_MinValues - Variable in class si.ijs.kt.clus.distance.primitive.SearchDistance
 
m_MinW - Variable in class si.ijs.kt.clus.main.settings.section.SettingsModel
Section: Model *
m_MinWeight - Variable in class si.ijs.kt.clus.ext.semisupervised.SemiSupMinLabeledWeightStopCrit
 
m_MinWeight - Variable in class si.ijs.kt.clus.heuristic.stopCriterion.ClusStopCriterionMinWeight
 
m_MissIndex - Variable in class si.ijs.kt.clus.model.test.SubsetTest
 
m_Missing - Variable in class si.ijs.kt.clus.algo.tdidt.processor.NodeExampleCollector
 
m_Missing - Variable in class si.ijs.kt.clus.algo.tdidt.processor.NodeIDWriter
 
m_MissingStat - Variable in class si.ijs.kt.clus.algo.split.CurrentBestTestAndHeuristic
 
m_MissingStat - Variable in class si.ijs.kt.clus.ext.optiontree.TestAndHeuristic
 
m_MixtureValues - Variable in class si.ijs.kt.clus.heuristic.EncodingCost
 
m_MixtureValuesRecode4 - Variable in class si.ijs.kt.clus.heuristic.EncodingCost
 
m_ML - Variable in class si.ijs.kt.clus.ext.ilevelc.ILevelCHeurStat
 
m_Mode - Variable in class si.ijs.kt.clus.algo.rules.ClusRulesFromTree
Currently two modes are supported: Settings.CONVERT_RULES_LEAVES: Generate one rule for each leaf of the tree Settings.CONVERT_RULES_ALLNODES: Generate one rule for each node of the tree (including internal nodes) except for the root
m_Model - Variable in class si.ijs.kt.clus.model.ClusModelInfo
 
m_ModelIDFiles - Variable in class si.ijs.kt.clus.main.settings.section.SettingsOutput
 
m_ModelInfos - Variable in class si.ijs.kt.clus.model.io.ClusModelCollectionIO
 
m_ModelNames - Variable in class si.ijs.kt.clus.model.processor.PredictionWriter
 
m_ModelNamesMap - Variable in class si.ijs.kt.clus.model.processor.PredictionWriter
 
m_ModelParts - Variable in class si.ijs.kt.clus.model.processor.PredictionWriter
 
m_Models - Variable in class si.ijs.kt.clus.main.ClusModelInfoList
 
m_ModelSize - Variable in class si.ijs.kt.clus.model.ClusModelInfo
 
m_Modified - Variable in class si.ijs.kt.clus.statistic.BitVectorStat
 
m_MTLearner - Variable in class si.ijs.kt.clus.addon.sit.searchAlgorithm.AllTargets
 
m_MultiLabelOptimizeThreshold - Variable in class si.ijs.kt.clus.main.settings.section.SettingsMLC
 
m_MultiLabelRankingMeasure - Variable in class si.ijs.kt.clus.main.settings.section.SettingsMLC
 
m_MultiLabelThreshold - Variable in class si.ijs.kt.clus.main.settings.section.SettingsMLC
Section: Multi-label classification *
m_MValue - Variable in class si.ijs.kt.clus.ext.beamsearch.ClusBeamHeuristicMEstimate
 
m_Name - Variable in class si.ijs.kt.clus.data.type.ClusAttrType
 
m_Name - Variable in class si.ijs.kt.clus.model.ClusModelInfo
 
m_Name - Variable in class si.ijs.kt.clus.util.jeans.io.ini.INIFileEntry
 
m_Names - Variable in class si.ijs.kt.clus.util.jeans.io.range.NominalType
 
m_NameToValue - Variable in class si.ijs.kt.clus.util.jeans.io.ini.INIFileInt
 
m_NbAttrs - Variable in class si.ijs.kt.clus.data.ClusSchema
 
m_NbAttrs - Variable in class si.ijs.kt.clus.statistic.RegressionStatBase
 
m_NbClass - Variable in class si.ijs.kt.clus.ext.ilevelc.ILevelCHeurStat
 
m_NbClasses - Variable in class si.ijs.kt.clus.ext.ilevelc.ILevelCInduce
 
m_NbCorrect - Variable in class si.ijs.kt.clus.error.Accuracy
 
m_NbCorrect - Variable in class si.ijs.kt.clus.error.mlc.SubsetAccuracy
 
m_NbCover - Variable in class si.ijs.kt.clus.error.common.ClusErrorList
 
m_NbDoubles - Variable in class si.ijs.kt.clus.data.ClusSchema
 
m_NbElements - Variable in class si.ijs.kt.clus.selection.XValGroup
 
m_nbEx - Variable in class si.ijs.kt.clus.error.MSError
 
m_nbEx - Variable in class si.ijs.kt.clus.error.sets.Accuracy
 
m_nbEx - Variable in class si.ijs.kt.clus.error.sets.F1Score
 
m_nbEx - Variable in class si.ijs.kt.clus.error.sets.HammingLossError
 
m_nbEx - Variable in class si.ijs.kt.clus.error.sets.Precision
 
m_nbEx - Variable in class si.ijs.kt.clus.error.sets.Recall
 
m_nbEx - Variable in class si.ijs.kt.clus.error.sets.SubsetAccuracy
 
m_NbExamples - Variable in class si.ijs.kt.clus.algo.tdidt.tune.CDTuneSizeConstrPruning
 
m_NbExamples - Variable in class si.ijs.kt.clus.error.common.ClusErrorList
 
m_NbExamples - Variable in class si.ijs.kt.clus.statistic.ClusStatistic
 
m_NbFalseNegatives - Variable in class si.ijs.kt.clus.error.mlc.MacroFOne
 
m_NbFalseNegatives - Variable in class si.ijs.kt.clus.error.mlc.MacroRecall
 
m_NbFalseNegatives - Variable in class si.ijs.kt.clus.error.mlc.MicroFOne
 
m_NbFalseNegatives - Variable in class si.ijs.kt.clus.error.mlc.MicroRecall
 
m_NbFalseNegatives - Variable in class si.ijs.kt.clus.error.mlcForHmlc.MacroFOne
 
m_NbFalseNegatives - Variable in class si.ijs.kt.clus.error.mlcForHmlc.MacroRecall
 
m_NbFalseNegatives - Variable in class si.ijs.kt.clus.error.mlcForHmlc.MicroFOne
 
m_NbFalseNegatives - Variable in class si.ijs.kt.clus.error.mlcForHmlc.MicroRecall
 
m_NbFalsePositives - Variable in class si.ijs.kt.clus.error.mlc.MacroFOne
 
m_NbFalsePositives - Variable in class si.ijs.kt.clus.error.mlc.MacroPrecision
 
m_NbFalsePositives - Variable in class si.ijs.kt.clus.error.mlc.MicroFOne
 
m_NbFalsePositives - Variable in class si.ijs.kt.clus.error.mlc.MicroPrecision
 
m_NbFalsePositives - Variable in class si.ijs.kt.clus.error.mlcForHmlc.MacroFOne
 
m_NbFalsePositives - Variable in class si.ijs.kt.clus.error.mlcForHmlc.MacroPrecision
 
m_NbFalsePositives - Variable in class si.ijs.kt.clus.error.mlcForHmlc.MicroFOne
 
m_NbFalsePositives - Variable in class si.ijs.kt.clus.error.mlcForHmlc.MicroPrecision
 
m_NbFolds - Variable in class si.ijs.kt.clus.ext.optxval.OptXValInduce
 
m_NbFolds - Variable in class si.ijs.kt.clus.selection.XValMainSelection
 
m_NbFoldTests - Variable in class si.ijs.kt.clus.ext.optxval.OptXValBinTree
 
m_NbHMTRAttributes - Variable in class si.ijs.kt.clus.data.ClusSchema
 
m_NbInts - Variable in class si.ijs.kt.clus.data.ClusSchema
 
m_NbKnown - Variable in class si.ijs.kt.clus.error.Accuracy
 
m_NbKnown - Variable in class si.ijs.kt.clus.error.mlc.AveragePrecision
 
m_NbKnown - Variable in class si.ijs.kt.clus.error.mlc.Coverage
 
m_NbKnown - Variable in class si.ijs.kt.clus.error.mlc.HammingLoss
 
m_NbKnown - Variable in class si.ijs.kt.clus.error.mlc.MLAccuracy
 
m_NbKnown - Variable in class si.ijs.kt.clus.error.mlc.MLFOneMeasure
 
m_NbKnown - Variable in class si.ijs.kt.clus.error.mlc.MLPrecision
 
m_NbKnown - Variable in class si.ijs.kt.clus.error.mlc.MLRecall
 
m_NbKnown - Variable in class si.ijs.kt.clus.error.mlc.OneError
 
m_NbKnown - Variable in class si.ijs.kt.clus.error.mlc.RankingLoss
 
m_NbKnown - Variable in class si.ijs.kt.clus.error.mlc.SubsetAccuracy
 
m_NbKnown - Variable in class si.ijs.kt.clus.error.mlcForHmlc.Coverage
 
m_NbLabeledEx - Variable in class si.ijs.kt.clus.error.PearsonCorrelation
 
m_NbMainArgs - Variable in class si.ijs.kt.clus.util.jeans.util.cmdline.CMDLineArgs
 
m_NbMissing - Variable in class si.ijs.kt.clus.data.type.ClusAttrType
 
m_NbModels - Variable in class si.ijs.kt.clus.addon.hmc.HMCAverageSingleClass.HMCAverageNodeWiseModels
 
m_NbModels - Variable in class si.ijs.kt.clus.addon.hmc.HMCAverageSingleClass.HMCAverageSingleClass
 
m_NbModels - Variable in class si.ijs.kt.clus.model.ClusModelInfo
 
m_NbNeg - Variable in class si.ijs.kt.clus.data.type.primitive.NumericAttrType.MySerializable
 
m_NbNeg - Variable in class si.ijs.kt.clus.error.BinaryPredictionList
The number of negative examples seen
m_NbNominal - Variable in class si.ijs.kt.clus.data.cols.ColTarget
 
m_NbNumeric - Variable in class si.ijs.kt.clus.data.cols.ColTarget
 
m_NbObjects - Variable in class si.ijs.kt.clus.data.ClusSchema
 
m_nbOfNonZeroRules - Variable in class si.ijs.kt.clus.util.tools.optimization.gd.GDProblem
Number of rules with nonzero weights.
m_NbPos - Variable in class si.ijs.kt.clus.error.BinaryPredictionList
The number of positive examples seen
m_NbPosActual - Variable in class si.ijs.kt.clus.error.hmlc.HierClassWiseAccuracy
 
m_NbPosPredictions - Variable in class si.ijs.kt.clus.error.hmlc.HierClassWiseAccuracy
 
m_NbRelevantLabels - Variable in class si.ijs.kt.clus.error.mlc.Coverage
 
m_NbRelevantLabels - Variable in class si.ijs.kt.clus.error.mlcForHmlc.Coverage
 
m_NbRows - Variable in class si.ijs.kt.clus.data.ClusData
 
m_NbRows - Variable in class si.ijs.kt.clus.data.cols.attribute.NominalAttribute
 
m_NbRows - Variable in class si.ijs.kt.clus.data.cols.attribute.NumericAttribute
 
m_NbRows - Variable in class si.ijs.kt.clus.data.cols.ColTarget
 
m_NbRows - Variable in class si.ijs.kt.clus.data.rows.RowDataSortHelper
 
m_NbRows - Variable in class si.ijs.kt.clus.selection.ClusSelection
 
m_NbRows - Variable in class si.ijs.kt.clus.selection.XValMainSelection
 
m_NbSel - Variable in class si.ijs.kt.clus.selection.BagSelection
 
m_NbSel - Variable in class si.ijs.kt.clus.selection.XValSelection
 
m_NbSelected - Variable in class si.ijs.kt.clus.selection.BitMapSelection
 
m_NbSelected - Variable in class si.ijs.kt.clus.selection.OverSample
 
m_NbSelected - Variable in class si.ijs.kt.clus.selection.RandomSelection
 
m_nbSequences - Variable in class si.ijs.kt.clus.heuristic.EncodingCost
 
m_NbTarget - Variable in class si.ijs.kt.clus.error.common.multiscore.MultiScoreStat
 
m_NbTarget - Variable in class si.ijs.kt.clus.statistic.ClassificationStat
 
m_NbTarget - Variable in class si.ijs.kt.clus.statistic.GeneticDistanceStat
 
m_NbTarget - Variable in class si.ijs.kt.clus.statistic.GISStat
Deprecated.
 
m_NbTargetAttributes - Variable in class si.ijs.kt.clus.model.processor.ClusEnsemblePredictionWriter
 
m_NbTargets - Variable in class si.ijs.kt.clus.ext.semisupervised.confidence.PredictionConfidence
 
m_NbTests - Variable in class si.ijs.kt.clus.ext.optxval.OptXValBinTree
 
m_NbTotal - Variable in class si.ijs.kt.clus.data.type.primitive.NumericAttrType.MySerializable
 
m_NbTotal - Variable in class si.ijs.kt.clus.error.common.ClusErrorList
 
m_NbTrain - Variable in class si.ijs.kt.clus.ext.beamsearch.ClusBeamHeuristic
 
m_NbTrain - Variable in class si.ijs.kt.clus.ext.ilevelc.ILevelCInduce
 
m_NbTruePositives - Variable in class si.ijs.kt.clus.error.mlc.MacroFOne
 
m_NbTruePositives - Variable in class si.ijs.kt.clus.error.mlc.MacroPrecision
 
m_NbTruePositives - Variable in class si.ijs.kt.clus.error.mlc.MacroRecall
 
m_NbTruePositives - Variable in class si.ijs.kt.clus.error.mlc.MicroFOne
 
m_NbTruePositives - Variable in class si.ijs.kt.clus.error.mlc.MicroPrecision
 
m_NbTruePositives - Variable in class si.ijs.kt.clus.error.mlc.MicroRecall
 
m_NbTruePositives - Variable in class si.ijs.kt.clus.error.mlcForHmlc.MacroFOne
 
m_NbTruePositives - Variable in class si.ijs.kt.clus.error.mlcForHmlc.MacroPrecision
 
m_NbTruePositives - Variable in class si.ijs.kt.clus.error.mlcForHmlc.MacroRecall
 
m_NbTruePositives - Variable in class si.ijs.kt.clus.error.mlcForHmlc.MicroFOne
 
m_NbTruePositives - Variable in class si.ijs.kt.clus.error.mlcForHmlc.MicroPrecision
 
m_NbTruePositives - Variable in class si.ijs.kt.clus.error.mlcForHmlc.MicroRecall
 
m_NbTuples - Variable in class si.ijs.kt.clus.heuristic.rules.ClusRuleHeuristicDispersion
 
m_NbUpdates - Variable in class si.ijs.kt.clus.ext.ensemble.ClusEnsembleInduceOptimization
The number of updates of predictions.
m_NbUpdatesLock - Variable in class si.ijs.kt.clus.ext.ensemble.ClusEnsembleInduceOptimization
 
m_NbValues - Variable in class si.ijs.kt.clus.error.common.multiscore.MultiScore
 
m_NbVt - Variable in class si.ijs.kt.clus.data.ClusSchema
 
m_NbWrong - Variable in class si.ijs.kt.clus.error.mlc.HammingLoss
 
m_NbWrong - Variable in class si.ijs.kt.clus.error.mlc.OneError
 
m_NbZero - Variable in class si.ijs.kt.clus.data.type.primitive.NumericAttrType.MySerializable
 
m_Neg - Variable in class si.ijs.kt.clus.ext.beamsearch.ClusBeamHeuristic
 
m_Neg - Variable in class si.ijs.kt.clus.heuristic.GISHeuristic
 
m_Neg - Variable in class si.ijs.kt.clus.heuristic.VarianceReductionHeuristicCompatibility
 
m_Neg - Variable in class si.ijs.kt.clus.heuristic.VarianceReductionHeuristicInclMissingValues
 
m_NegFolds - Variable in class si.ijs.kt.clus.ext.optxval.SoftNumericTest
 
m_NegStat - Variable in class si.ijs.kt.clus.heuristic.ClusHeuristicImpl
 
m_NegStat - Variable in class si.ijs.kt.clus.heuristic.rules.ClusRuleHeuristicSSD
 
m_NegStat - Variable in class si.ijs.kt.clus.heuristic.VarianceReductionHeuristic
 
m_Next - Variable in class si.ijs.kt.clus.util.jeans.util.list.MyList
 
m_Node - Variable in class si.ijs.kt.clus.data.cols.ColTarget
 
m_NodeErr - Variable in class si.ijs.kt.clus.pruning.BottomUpPruningVSB
 
m_Nodes - Variable in class si.ijs.kt.clus.ext.optxval.OptXValGroup
 
m_Nodes - Variable in class si.ijs.kt.clus.ext.optxval.OptXValNode
 
m_Nominal - Variable in class si.ijs.kt.clus.data.cols.ColTarget
 
m_NominalAttrUse - Variable in class si.ijs.kt.clus.data.ClusSchema
 
m_NominalSubsetTests - Variable in class si.ijs.kt.clus.main.settings.section.SettingsModel
 
m_NonnormalisedLoss - Variable in class si.ijs.kt.clus.error.mlc.RankingLoss
 
m_NonnormalisedPrec - Variable in class si.ijs.kt.clus.error.mlc.AveragePrecision
 
m_NonSparse - Variable in class si.ijs.kt.clus.data.ClusSchema
 
m_Normalization - Variable in class si.ijs.kt.clus.ext.semisupervised.confidence.PredictionConfidence
 
m_NormalizationWeights - Variable in class si.ijs.kt.clus.data.attweights.ClusNormalizedAttributeWeights
 
m_NormalizationWeights - Variable in class si.ijs.kt.clus.distance.primitive.SearchDistance
 
m_NormalizationWeights - Variable in class si.ijs.kt.clus.main.ClusStatManager
Variance used for normalization of attributes during error computation etc.
m_NoTrivialClasses - Variable in class si.ijs.kt.clus.error.hmlc.HierClassWiseAccuracy
 
m_Numeric - Variable in class si.ijs.kt.clus.data.cols.ColTarget
 
m_Numeric - Variable in class si.ijs.kt.clus.ext.ilevelc.ILevelCStatistic
 
m_NumericAttrUse - Variable in class si.ijs.kt.clus.data.ClusSchema
 
m_NumericSplitTotStatSVarS - Variable in class si.ijs.kt.clus.heuristic.ClusHeuristic
Used for more efficient split quality estimation.
m_Obj1 - Variable in class si.ijs.kt.clus.util.jeans.util.compound.DuoObject
 
m_Obj2 - Variable in class si.ijs.kt.clus.util.jeans.util.compound.DuoObject
 
m_Object - Variable in class si.ijs.kt.clus.ext.beamsearch.ClusBeamTreeElem
 
m_Object - Variable in class si.ijs.kt.clus.ext.beamsearch.ClusBeamTreeElemOld
 
m_Object - Variable in class si.ijs.kt.clus.util.jeans.util.compound.DoubleObject
 
m_Object - Variable in class si.ijs.kt.clus.util.jeans.util.compound.IntObject
 
m_Objects - Variable in class si.ijs.kt.clus.data.rows.DataTuple
Structured attributes of the tuple.
m_OOBCounts - Variable in class si.ijs.kt.clus.selection.OOBSelection
 
m_OOBNbSel - Variable in class si.ijs.kt.clus.selection.OOBSelection
 
m_OppositeAlternatives - Variable in class si.ijs.kt.clus.algo.tdidt.ClusNode
 
m_Optimal - Variable in class si.ijs.kt.clus.algo.tdidt.tune.CDTuneSizeConstrPruning
 
m_OptimizeMeasure - Variable in class si.ijs.kt.clus.error.hmlc.HierErrorMeasures
 
m_optionDecayFactor - Variable in class si.ijs.kt.clus.main.settings.section.SettingsOptionTree
 
m_optionEpsilon - Variable in class si.ijs.kt.clus.main.settings.section.SettingsOptionTree
 
m_optionFactor - Variable in class si.ijs.kt.clus.main.settings.section.SettingsOptionTree
Section: Option tree
m_optionMaxDepthOfOptionNode - Variable in class si.ijs.kt.clus.main.settings.section.SettingsOptionTree
 
m_optionMaxNumberOfOptionsPerNode - Variable in class si.ijs.kt.clus.main.settings.section.SettingsOptionTree
 
m_OptRuleWeightBinarization - Variable in class si.ijs.kt.clus.main.settings.section.SettingsRules
If this flag is set, weights higher than m_OptRuleWeightThreshold will get value 1, others will be set to 0
m_OptWeight - Variable in class si.ijs.kt.clus.algo.rules.ClusRule
Optimized weight of the rule
m_optWeightBestFitness - Variable in class si.ijs.kt.clus.algo.rules.ClusRuleSet
If weights are optimized, what was the fitness of best T value that was used for this rule set
m_optWeightBestTValue - Variable in class si.ijs.kt.clus.algo.rules.ClusRuleSet
If weights are optimized, what was the best T value that was used for this rule set
m_Orig - Variable in class si.ijs.kt.clus.main.ClusRun
 
m_OrigData - Variable in class si.ijs.kt.clus.ext.ilevelc.COPKMeans
 
m_OrigSize - Variable in class si.ijs.kt.clus.algo.tdidt.tune.CDTuneSizeConstrPruning
 
m_OrigTree - Variable in class si.ijs.kt.clus.pruning.PruneTree
 
m_Others - Variable in class si.ijs.kt.clus.ext.beamsearch.ClusBeamTreeElem
 
m_Others - Variable in class si.ijs.kt.clus.ext.beamsearch.ClusBeamTreeElemOld
 
m_OthersList - Variable in class si.ijs.kt.clus.ext.beamsearch.ClusBeamTreeElemOld
 
m_OutFoldData - Variable in class si.ijs.kt.clus.main.settings.section.SettingsOutput
Print out data to .arff files for each fold, m_WritePredictions has to be given value to this to work
m_OutFoldErr - Variable in class si.ijs.kt.clus.main.settings.section.SettingsOutput
Section: Output *
m_OutFoldModels - Variable in class si.ijs.kt.clus.main.settings.section.SettingsOutput
 
m_Output - Variable in class si.ijs.kt.clus.pruning.SequencePruningVSB
 
m_OutputClowdFlowsJSON - Variable in class si.ijs.kt.clus.main.settings.section.SettingsOutput
 
m_OutputDatabaseQueries - Variable in class si.ijs.kt.clus.main.settings.section.SettingsOutput
 
m_OutputJSONModel - Variable in class si.ijs.kt.clus.main.settings.section.SettingsOutput
 
m_OutputPythonModel - Variable in class si.ijs.kt.clus.main.settings.section.SettingsOutput
 
m_OutputROSSubspaces - Variable in class si.ijs.kt.clus.main.settings.section.SettingsOutput
 
m_OutSchema - Variable in class si.ijs.kt.clus.model.processor.PredictionWriter
 
m_OutTestErr - Variable in class si.ijs.kt.clus.main.settings.section.SettingsOutput
 
m_OutTrainErr - Variable in class si.ijs.kt.clus.main.settings.section.SettingsOutput
 
m_OutValidErr - Variable in class si.ijs.kt.clus.main.settings.section.SettingsOutput
 
m_P - Variable in class si.ijs.kt.clus.statistic.WHTDStatistic
 
m_P - Variable in class si.ijs.kt.clus.util.jeans.util.DisjointSetForest
 
m_PairwiseDistStat - Variable in class si.ijs.kt.clus.statistic.HierSumPairwiseDistancesStat
 
m_Parent - Variable in class si.ijs.kt.clus.error.common.ClusError
 
m_Parent - Variable in class si.ijs.kt.clus.ext.optiontree.MyNode
 
m_Parent - Variable in class si.ijs.kt.clus.util.jeans.tree.MyNode
 
m_ParentIndex - Variable in class si.ijs.kt.clus.ext.beamsearch.ClusBeamModel
 
m_Parents - Variable in class si.ijs.kt.clus.ext.hierarchical.ClassTerm
 
m_ParentStat - Variable in class si.ijs.kt.clus.statistic.ClassificationStat
 
m_ParentStat - Variable in class si.ijs.kt.clus.statistic.RegressionStat
 
m_ParentStat - Variable in class si.ijs.kt.clus.statistic.RegressionStatBinaryNomiss
 
m_Path - Variable in class si.ijs.kt.clus.ext.hierarchical.ClassesValue
 
m_perTargetScores - Variable in class si.ijs.kt.clus.ext.semisupervised.confidence.PredictionConfidence
 
m_Points - Variable in class si.ijs.kt.clus.addon.ILevelC.ilevelc.ILevelCGUI.ILevelCComponent
 
m_Points - Variable in class si.ijs.kt.clus.ext.ilevelc.DerivedConstraintsComputer
 
m_PooledAUPRC - Variable in class si.ijs.kt.clus.error.hmlc.HierErrorMeasures
 
m_PooledAUPRC - Variable in class si.ijs.kt.clus.error.mlc.MLROCAndPRCurve
 
m_PooledAUPRC - Variable in class si.ijs.kt.clus.error.mlcForHmlc.MLROCAndPRCurve
 
m_Pos - Variable in class si.ijs.kt.clus.ext.beamsearch.ClusBeamHeuristic
 
m_Pos - Variable in class si.ijs.kt.clus.heuristic.GISHeuristic
 
m_Pos - Variable in class si.ijs.kt.clus.heuristic.VarianceReductionHeuristicCompatibility
 
m_Pos - Variable in class si.ijs.kt.clus.heuristic.VarianceReductionHeuristicInclMissingValues
 
m_PosFolds - Variable in class si.ijs.kt.clus.ext.optxval.SoftNumericTest
 
m_PosFreq - Variable in class si.ijs.kt.clus.algo.split.CurrentBestTestAndHeuristic
 
m_PosFreq - Variable in class si.ijs.kt.clus.ext.optiontree.TestAndHeuristic
 
m_PosFreq - Variable in class si.ijs.kt.clus.model.test.SubsetTest
 
m_Position - Variable in class si.ijs.kt.clus.main.settings.SettingsBase
 
m_PosStat - Variable in class si.ijs.kt.clus.algo.split.CurrentBestTestAndHeuristic
 
m_PosStat - Variable in class si.ijs.kt.clus.ext.optiontree.TestAndHeuristic
 
m_PosStat - Variable in class si.ijs.kt.clus.ext.optxval.OptXValInduce
 
m_PR - Variable in class si.ijs.kt.clus.error.ROCAndPRCurve
 
m_PRCurves - Variable in class si.ijs.kt.clus.error.hmlc.HierErrorMeasures
 
m_PrecisionAtRecall - Variable in class si.ijs.kt.clus.error.ROCAndPRCurve
 
m_PrecisionSum - Variable in class si.ijs.kt.clus.error.mlc.MLPrecision
 
m_Pred - Variable in class si.ijs.kt.clus.error.common.multiscore.MultiScoreWrapper
 
m_predCovWithTrue - Variable in class si.ijs.kt.clus.util.tools.optimization.gd.GDProblem
Covariances between predictors and true values.
m_Predicted - Variable in class si.ijs.kt.clus.error.hmlc.HierLevelAccuracy
 
m_prediction - Variable in class si.ijs.kt.clus.util.tools.optimization.OptimizationProblem.RulePred
 
m_Predictions - Variable in class si.ijs.kt.clus.addon.sit.mtLearner.ResultsCache
 
m_Predictions - Variable in class si.ijs.kt.clus.ext.beamsearch.ClusBeamModel
 
m_PredictionTime - Variable in class si.ijs.kt.clus.main.ClusModelInfoList
 
m_PredictionTimeNbExamples - Variable in class si.ijs.kt.clus.main.ClusModelInfoList
 
m_PredLevelErr - Variable in class si.ijs.kt.clus.error.hmlc.HierLevelAccuracy
 
m_PredProb - Variable in class si.ijs.kt.clus.addon.hmc.HMCAverageSingleClass.HMCAverageNodeWiseModels
 
m_PredProb - Variable in class si.ijs.kt.clus.addon.hmc.HMCAverageSingleClass.HMCAverageSingleClass
 
m_PredProb - Variable in class si.ijs.kt.clus.addon.hmc.HMCAverageSingleClass.HMCAverageTreeModel
 
m_Preprocs - Variable in class si.ijs.kt.clus.data.rows.DataPreprocs
 
m_PrepTime - Variable in class si.ijs.kt.clus.main.ClusModelInfoList
 
m_Preset - Static variable in class si.ijs.kt.clus.util.ClusRandom
 
m_Prev - Variable in class si.ijs.kt.clus.util.jeans.util.list.MyListIter
 
m_PrevCl - Variable in class si.ijs.kt.clus.ext.optxval.OptXValInduce
 
m_PrevFP - Variable in class si.ijs.kt.clus.error.ROCAndPRCurve
 
m_PrevTime - Static variable in class si.ijs.kt.clus.main.ClusStat
 
m_PrevTP - Variable in class si.ijs.kt.clus.error.ROCAndPRCurve
 
m_PrevVl - Variable in class si.ijs.kt.clus.ext.optxval.OptXValInduce
 
m_PrintAllComps - Variable in class si.ijs.kt.clus.error.MSError
 
m_PrintAllComps - Variable in class si.ijs.kt.clus.error.MSNominalError
 
m_PrintAllComps - Variable in class si.ijs.kt.clus.error.sets.Accuracy
 
m_PrintAllComps - Variable in class si.ijs.kt.clus.error.sets.F1Score
 
m_PrintAllComps - Variable in class si.ijs.kt.clus.error.sets.HammingLossError
 
m_PrintAllComps - Variable in class si.ijs.kt.clus.error.sets.Precision
 
m_PrintAllComps - Variable in class si.ijs.kt.clus.error.sets.Recall
 
m_PrintAllComps - Variable in class si.ijs.kt.clus.error.sets.SubsetAccuracy
 
m_printGDDebugInformation - Static variable in class si.ijs.kt.clus.util.tools.optimization.gd.GDProblem
Do we print debugging information.
m_PrintModelAndExamples - Variable in class si.ijs.kt.clus.main.settings.section.SettingsOutput
 
m_Prior - Variable in class si.ijs.kt.clus.ext.beamsearch.ClusBeamHeuristicMEstimate
 
m_Procs - Variable in class si.ijs.kt.clus.data.rows.TupleIterator
 
m_Prune - Variable in class si.ijs.kt.clus.main.ClusRun
 
m_PruneSel - Variable in class si.ijs.kt.clus.main.ClusRun
 
m_PruneTime - Variable in class si.ijs.kt.clus.main.ClusModelInfoList
 
m_RandIndex - Variable in class si.ijs.kt.clus.ext.ilevelc.COPKMeansModel
 
m_RandIndex - Variable in class si.ijs.kt.clus.ext.ilevelc.ILevelCRandIndex
 
m_Random - Static variable in class si.ijs.kt.clus.ext.beamsearch.ClusBeamTreeElem
 
m_Random - Variable in class si.ijs.kt.clus.selection.XValRandomSelection
 
m_Random - Static variable in class si.ijs.kt.clus.statistic.SumPairwiseDistancesStat
 
m_Random - Static variable in class si.ijs.kt.clus.util.ClusRandom
 
m_Rank - Variable in class si.ijs.kt.clus.util.jeans.util.DisjointSetForest
 
m_RankSum - Variable in class si.ijs.kt.clus.error.mlc.Coverage
 
m_RankSum - Variable in class si.ijs.kt.clus.error.mlcForHmlc.Coverage
 
m_Reader - Variable in class si.ijs.kt.clus.data.io.ARFFFile
 
m_Reader - Variable in class si.ijs.kt.clus.data.rows.FileTupleIterator
 
m_Real - Variable in class si.ijs.kt.clus.error.common.multiscore.MultiScoreWrapper
 
m_RecallSum - Variable in class si.ijs.kt.clus.error.mlc.MLRecall
 
m_RecallValues - Variable in class si.ijs.kt.clus.error.hmlc.HierErrorMeasures
 
m_RecallValues - Variable in class si.ijs.kt.clus.main.settings.section.SettingsHMLC
 
m_Recursive - Variable in class si.ijs.kt.clus.main.settings.section.SettingsSIT
 
m_ReduceMemoryNominal - Variable in class si.ijs.kt.clus.main.settings.section.SettingsAttribute
 
m_Refined - Variable in class si.ijs.kt.clus.ext.beamsearch.ClusBeamModel
 
m_Refinement - Variable in class si.ijs.kt.clus.ext.beamsearch.ClusBeamModel
 
m_RegStat - Variable in class si.ijs.kt.clus.statistic.CombStat
 
m_Relation - Variable in class si.ijs.kt.clus.data.ClusSchema
 
m_Relative - Variable in class si.ijs.kt.clus.algo.tdidt.tune.CDTuneSizeConstrPruning
 
m_RelativeScale - Variable in class si.ijs.kt.clus.algo.tdidt.tune.CDTuneSizeConstrPruning
 
m_RelErrAcc - Variable in class si.ijs.kt.clus.algo.tdidt.tune.CDTuneSizeConstrPruning
 
m_RelevantLabelIndex - Static variable in class si.ijs.kt.clus.distance.primitive.relief.MultiLabelDistance
 
m_RepresentativeMean - Variable in class si.ijs.kt.clus.ext.structuredTypes.SetStatistic
 
m_RepresentativeMean - Variable in class si.ijs.kt.clus.ext.structuredTypes.TupleStatistic
 
m_RepresentativeMean - Variable in class si.ijs.kt.clus.ext.timeseries.TimeSeriesStat
 
m_RepresentativeMedoid - Variable in class si.ijs.kt.clus.ext.structuredTypes.SetStatistic
 
m_RepresentativeMedoid - Variable in class si.ijs.kt.clus.ext.structuredTypes.TupleStatistic
 
m_RepresentativeMedoid - Variable in class si.ijs.kt.clus.ext.timeseries.TimeSeriesStat
 
m_RightSubTree - Variable in class si.ijs.kt.clus.algo.kNN.methods.kdTree.KDNode
 
m_RightSubTree - Variable in class si.ijs.kt.clus.algo.kNN.methods.vpTree.VPNode
 
m_ROC - Variable in class si.ijs.kt.clus.error.ROCAndPRCurve
 
m_ROCAndPRCurves - Variable in class si.ijs.kt.clus.error.hmlc.HierErrorMeasures
 
m_ROCAndPRCurves - Variable in class si.ijs.kt.clus.error.mlc.MLROCAndPRCurve
 
m_ROCAndPRCurves - Variable in class si.ijs.kt.clus.error.mlcForHmlc.MLROCAndPRCurve
 
m_ROCCurves - Variable in class si.ijs.kt.clus.error.hmlc.HierErrorMeasures
 
m_Root - Variable in class si.ijs.kt.clus.algo.tdidt.DepthFirstInduce
 
m_Root - Variable in class si.ijs.kt.clus.error.hmlc.HierRMSError
 
m_Root - Variable in class si.ijs.kt.clus.ext.beamsearch.ClusBeamModel
 
m_Root - Variable in class si.ijs.kt.clus.ext.bestfirst.BestFirstInduce
 
m_Root - Variable in class si.ijs.kt.clus.ext.featureRanking.relief.ReliefInduce
 
m_Root - Variable in class si.ijs.kt.clus.ext.hierarchical.ClassHierarchy
 
m_Root - Variable in class si.ijs.kt.clus.ext.optiontree.DepthFirstInduceWithOptions
 
m_RootAvgAllDistances - Variable in class si.ijs.kt.clus.heuristic.GeneticDistanceHeuristicMatrix
 
m_RootData - Variable in class si.ijs.kt.clus.heuristic.GeneticDistanceHeuristic
 
m_RootDelta - Variable in class si.ijs.kt.clus.distance.hierarchies.HierWeightSPath
 
m_RootSumAllDistances - Variable in class si.ijs.kt.clus.heuristic.GeneticDistanceHeuristicMatrix
 
m_RootSumEntropyWithin - Variable in class si.ijs.kt.clus.heuristic.GeneticDistanceHeuristicMatrix
 
m_ROSSubspaceSizes - Variable in class si.ijs.kt.clus.algo.rules.tune.FIREROSTune
 
m_RuleInduceOnly - Variable in class si.ijs.kt.clus.main.ClusStatManager
 
m_rulePredictions - Variable in class si.ijs.kt.clus.util.tools.optimization.OptimizationProblem.OptimizationParameter
 
m_Rules - Variable in class si.ijs.kt.clus.algo.rules.ClusRuleSet
 
m_ruleSet - Variable in class si.ijs.kt.clus.util.tools.optimization.gd.GDProblem
 
m_Run - Variable in class si.ijs.kt.clus.algo.kNN.methods.kdTree.KDTree
 
m_Run - Variable in class si.ijs.kt.clus.algo.kNN.methods.SearchAlgorithm
 
m_Runs - Variable in class si.ijs.kt.clus.main.ClusSummary
 
m_SampleSize - Variable in class si.ijs.kt.clus.heuristic.GeneticDistanceHeuristicMatrix
 
m_Sampling - Variable in class si.ijs.kt.clus.heuristic.GeneticDistanceHeuristicMatrix
 
m_Save - Variable in class si.ijs.kt.clus.addon.ILevelC.ilevelc.ILevelCGUI
 
m_Scale - Variable in class si.ijs.kt.clus.algo.rules.ClusRuleConstraintInduce
 
m_Scale - Variable in class si.ijs.kt.clus.ext.ilevelc.COPKMeans
 
m_Scale - Variable in class si.ijs.kt.clus.ext.ilevelc.ILevelCInduce
 
m_Schema - Variable in class si.ijs.kt.clus.addon.ILevelC.ilevelc.ILevelCGUI
 
m_Schema - Variable in class si.ijs.kt.clus.addon.sit.mtLearner.ClusLearner
 
m_Schema - Variable in class si.ijs.kt.clus.addon.sit.Sit
 
m_Schema - Variable in class si.ijs.kt.clus.algo.ClusInductionAlgorithm
 
m_Schema - Variable in class si.ijs.kt.clus.algo.tdidt.processor.NodeIDWriter
 
m_Schema - Variable in class si.ijs.kt.clus.algo.tdidt.tune.CDTuneSizeConstrPruning
 
m_Schema - Variable in class si.ijs.kt.clus.data.rows.DataTuple
 
m_Schema - Variable in class si.ijs.kt.clus.data.rows.RowData
 
m_Schema - Variable in class si.ijs.kt.clus.data.type.ClusAttrType
 
m_Schema - Variable in class si.ijs.kt.clus.main.ClusOutput
 
m_Schema - Variable in class si.ijs.kt.clus.main.ClusStatManager
 
m_Score - Variable in class si.ijs.kt.clus.error.common.multiscore.MultiScoreStat
 
m_Score - Variable in class si.ijs.kt.clus.model.ClusModelInfo
 
m_Scratch - Variable in class si.ijs.kt.clus.error.hmlc.HierRMSError
 
m_Scratch - Variable in class si.ijs.kt.clus.ext.hierarchical.ClassHierarchyPreproc
 
m_Scratch - Variable in class si.ijs.kt.clus.ext.optxval.OptXValInduce
 
m_Search - Variable in class si.ijs.kt.clus.addon.sit.Sit
 
m_Search - Variable in class si.ijs.kt.clus.ext.beamsearch.ClusBeamInduce
 
m_Search - Variable in class si.ijs.kt.clus.ext.exhaustivesearch.ClusExhaustiveInduce
 
m_Search - Variable in class si.ijs.kt.clus.main.settings.section.SettingsSIT
 
m_SearchDistance - Variable in class si.ijs.kt.clus.algo.kNN.methods.SearchAlgorithm
 
m_SearchSelection - Variable in class si.ijs.kt.clus.addon.sit.Sit
 
m_Section - Variable in class si.ijs.kt.clus.main.settings.SettingsBase
 
m_Sel - Variable in class si.ijs.kt.clus.selection.XValSelection
 
m_Selection - Variable in class si.ijs.kt.clus.selection.BitMapSelection
 
m_Selection - Variable in class si.ijs.kt.clus.selection.RandomSelection
 
m_Selection - Variable in class si.ijs.kt.clus.selection.XValRandomSelection
 
m_Selector - Variable in class si.ijs.kt.clus.ext.optxval.OptXValInduce
 
m_SeqPruner - Variable in class si.ijs.kt.clus.pruning.SequencePruningVSB
 
m_Sequences - Variable in class si.ijs.kt.clus.heuristic.GeneticDistanceHeuristicMatrix
 
m_SetDataTimer - Variable in class si.ijs.kt.clus.heuristic.GeneticDistanceHeuristicMatrix
 
m_SetsData - Variable in class si.ijs.kt.clus.main.settings.section.SettingsExperimental
 
m_Sett - Variable in class si.ijs.kt.clus.addon.sit.ErrorOutput
 
m_Sett - Variable in class si.ijs.kt.clus.addon.sit.mtLearner.MTLearnerImpl
 
m_Sett - Variable in class si.ijs.kt.clus.addon.sit.searchAlgorithm.SearchAlgorithmImpl
 
m_Sett - Variable in class si.ijs.kt.clus.addon.sit.Sit
 
m_Sett - Variable in class si.ijs.kt.clus.algo.tdidt.processor.NodeExampleCollector
 
m_Sett - Variable in class si.ijs.kt.clus.algo.tdidt.processor.NodeIDWriter
 
m_Sett - Variable in class si.ijs.kt.clus.data.rows.DiskTupleIterator
 
m_Sett - Variable in class si.ijs.kt.clus.main.ClusOutput
 
m_Sett - Variable in class si.ijs.kt.clus.model.processor.ClusEnsemblePredictionWriter
 
m_Sett - Variable in class si.ijs.kt.clus.model.processor.PredictionWriter
 
m_Sett2 - Variable in class si.ijs.kt.clus.main.ClusOutput
 
m_Settings - Variable in class si.ijs.kt.clus.data.ClusSchema
 
m_Settings - Variable in class si.ijs.kt.clus.ext.ensemble.ClusForest
 
m_Settings - Variable in class si.ijs.kt.clus.main.ClusStatManager
 
m_Settings - Variable in class si.ijs.kt.clus.statistic.ClusStatistic
 
m_ShouldAttach - Variable in class si.ijs.kt.clus.data.rows.TupleIterator
 
m_ShouldPruneInvalid - Variable in class si.ijs.kt.clus.model.ClusModelInfo
 
m_ShouldSave - Variable in class si.ijs.kt.clus.model.ClusModelInfo
 
m_ShouldWritePredictions - Variable in class si.ijs.kt.clus.model.ClusModelInfo
 
m_ShowBrFreq - Variable in class si.ijs.kt.clus.main.settings.section.SettingsOutput
 
m_ShowForest - Variable in class si.ijs.kt.clus.main.settings.section.SettingsExperimental
 
m_ShowInfo - Variable in class si.ijs.kt.clus.main.settings.section.SettingsOutput
 
m_ShowModels - Variable in class si.ijs.kt.clus.main.settings.section.SettingsOutput
 
m_ShowThresholds - Variable in class si.ijs.kt.clus.main.settings.section.SettingsMLC
 
m_ShowUnknown - Variable in class si.ijs.kt.clus.main.settings.section.SettingsOutput
 
m_SigLevel - Variable in class si.ijs.kt.clus.statistic.WHTDStatistic
 
m_SingleDouble - Variable in class si.ijs.kt.clus.util.jeans.io.ini.INIFileNominalOrDoubleOrVector
 
m_SingleInt - Variable in class si.ijs.kt.clus.util.jeans.io.ini.INIFileNominalOrIntOrVector
 
m_SingleNominal - Variable in class si.ijs.kt.clus.util.jeans.io.ini.INIFileNominalOrDoubleOrVector
 
m_SingleNominal - Variable in class si.ijs.kt.clus.util.jeans.io.ini.INIFileNominalOrIntOrVector
 
m_Size - Variable in class si.ijs.kt.clus.util.jeans.math.matrix.MSymMatrix
 
m_Size - Variable in class si.ijs.kt.clus.util.jeans.util.DisjointSetForest
 
m_SizePenalty - Variable in class si.ijs.kt.clus.main.settings.section.SettingsBeamSearch
 
m_Sorted - Variable in class si.ijs.kt.clus.model.test.NominalTest
 
m_SortHelper - Variable in class si.ijs.kt.clus.algo.split.FindBestTest
 
m_SortHelper - Variable in class si.ijs.kt.clus.ext.ilevelc.ILevelCInduce
 
m_SortHelper - Variable in class si.ijs.kt.clus.ext.optiontree.FindBestTests
 
m_Sparse - Variable in class si.ijs.kt.clus.data.type.primitive.NumericAttrType
 
m_Split - Variable in class si.ijs.kt.clus.algo.split.FindBestTest
 
m_Split - Variable in class si.ijs.kt.clus.data.cols.attribute.ClusAttribute
 
m_Split - Variable in class si.ijs.kt.clus.ext.beamsearch.ClusBeamInduce
 
m_Split - Variable in class si.ijs.kt.clus.ext.exhaustivesearch.ClusExhaustiveInduce
 
m_Split - Variable in class si.ijs.kt.clus.ext.optiontree.TestAndHeuristic
 
m_Split - Variable in class si.ijs.kt.clus.ext.optxval.OptXValInduce
 
m_SplitAttr - Variable in class si.ijs.kt.clus.algo.split.CurrentBestTestAndHeuristic
 
m_SplitAttr - Variable in class si.ijs.kt.clus.ext.optiontree.TestAndHeuristic
 
m_SSPDMtrx - Variable in class si.ijs.kt.clus.main.ClusStatManager
 
m_Stab - Variable in class si.ijs.kt.clus.ext.hierarchical.HierIO
 
m_Stack - Variable in class si.ijs.kt.clus.algo.kNN.methods.kdTree.KDTree
 
m_StartItemCpt - Variable in class si.ijs.kt.clus.main.settings.section.SettingsExhaustiveSearch
 
m_StartTreeCpt - Variable in class si.ijs.kt.clus.main.settings.section.SettingsExhaustiveSearch
 
m_Stat - Variable in class si.ijs.kt.clus.ext.timeseries.TimeSeriesSignificantChangeTesterXVAL
 
m_StatisticAttrUse - Variable in class si.ijs.kt.clus.main.ClusStatManager
 
m_StatManager - Variable in class si.ijs.kt.clus.algo.ClusInductionAlgorithm
 
m_StatManager - Variable in class si.ijs.kt.clus.algo.rules.ClusRule
 
m_StatManager - Variable in class si.ijs.kt.clus.algo.rules.ClusRuleSet
 
m_StatManager - Variable in class si.ijs.kt.clus.algo.split.FindBestTest
 
m_StatManager - Variable in class si.ijs.kt.clus.ext.ensemble.ClusForest
 
m_StatManager - Variable in class si.ijs.kt.clus.ext.optiontree.FindBestTests
 
m_StatManager - Variable in class si.ijs.kt.clus.ext.optiontree.MyNode
 
m_StatManager - Variable in class si.ijs.kt.clus.ext.semisupervised.confidence.PredictionConfidence
 
m_StatManager - Variable in class si.ijs.kt.clus.heuristic.hierarchical.ClusRuleHeuristicHierarchical
 
m_StatManager - Variable in class si.ijs.kt.clus.heuristic.rules.ClusRuleHeuristicDispersion
 
m_StatManager - Variable in class si.ijs.kt.clus.heuristic.rules.ClusRuleHeuristicSSD
 
m_StatManager - Variable in class si.ijs.kt.clus.statistic.CombStat
 
m_StatMgr - Variable in class si.ijs.kt.clus.main.ClusSummary
 
m_StatTemplate - Variable in class si.ijs.kt.clus.algo.kNN.KnnModel
 
m_Status - Variable in class si.ijs.kt.clus.data.type.ClusAttrType
 
m_StDev - Variable in class si.ijs.kt.clus.model.processor.ClusEnsemblePredictionWriter
 
m_stepSize - Variable in class si.ijs.kt.clus.util.tools.optimization.gd.GDProblem
Step size for gradient descent
m_StopCount - Variable in class si.ijs.kt.clus.ext.beamsearch.ClusBeamSizeConstraints
 
m_StopCrit - Variable in class si.ijs.kt.clus.heuristic.ClusHeuristic
 
m_StrWrt - Variable in class si.ijs.kt.clus.main.ClusOutput
 
m_Subset - Variable in class si.ijs.kt.clus.algo.rules.ClusCalcRuleErrorProc
 
m_Subset - Variable in class si.ijs.kt.clus.ext.optiontree.TestAndHeuristic
 
m_SubTerms - Variable in class si.ijs.kt.clus.ext.hierarchical.ClassTerm
 
m_Suffix - Variable in class si.ijs.kt.clus.main.settings.section.SettingsGeneric
 
m_Sum - Variable in class si.ijs.kt.clus.util.jeans.math.SingleStat
 
m_SumAi - Variable in class si.ijs.kt.clus.error.PearsonCorrelation
 
m_SumAllDistances - Variable in class si.ijs.kt.clus.heuristic.GeneticDistanceHeuristicMatrix
 
m_SumDistWithCompl - Variable in class si.ijs.kt.clus.heuristic.GeneticDistanceHeuristicMatrix
 
m_SumEntropyWithin - Variable in class si.ijs.kt.clus.heuristic.GeneticDistanceHeuristicMatrix
 
m_SumErr - Variable in class si.ijs.kt.clus.error.AvgDistancesError
 
m_SumErr - Variable in class si.ijs.kt.clus.error.MSError
 
m_SumErr - Variable in class si.ijs.kt.clus.error.MSNominalError
 
m_SumErr - Variable in class si.ijs.kt.clus.error.sets.Accuracy
 
m_SumErr - Variable in class si.ijs.kt.clus.error.sets.F1Score
 
m_SumErr - Variable in class si.ijs.kt.clus.error.sets.HammingLossError
 
m_SumErr - Variable in class si.ijs.kt.clus.error.sets.Precision
 
m_SumErr - Variable in class si.ijs.kt.clus.error.sets.Recall
 
m_SumErr - Variable in class si.ijs.kt.clus.error.sets.SubsetAccuracy
 
m_Summary - Variable in class si.ijs.kt.clus.main.ClusRun
 
m_SumPi - Variable in class si.ijs.kt.clus.error.PearsonCorrelation
 
m_SumPiAi - Variable in class si.ijs.kt.clus.error.PearsonCorrelation
 
m_SumPredictions - Variable in class si.ijs.kt.clus.ext.beamsearch.ClusBeamSimClassStat
 
m_SumPredictions - Variable in class si.ijs.kt.clus.ext.beamsearch.ClusBeamSimRegrStat
 
m_SumRelErr - Variable in class si.ijs.kt.clus.error.RelativeError
 
m_SumSAi - Variable in class si.ijs.kt.clus.error.PearsonCorrelation
 
m_SumSPi - Variable in class si.ijs.kt.clus.error.PearsonCorrelation
 
m_SumSQ - Variable in class si.ijs.kt.clus.util.jeans.math.SingleStat
 
m_SumSqErr - Variable in class si.ijs.kt.clus.error.MSError
 
m_SumSqErr - Variable in class si.ijs.kt.clus.error.MSNominalError
 
m_SumSqErr - Variable in class si.ijs.kt.clus.error.sets.Accuracy
 
m_SumSqErr - Variable in class si.ijs.kt.clus.error.sets.F1Score
 
m_SumSqErr - Variable in class si.ijs.kt.clus.error.sets.HammingLossError
 
m_SumSqErr - Variable in class si.ijs.kt.clus.error.sets.Precision
 
m_SumSqErr - Variable in class si.ijs.kt.clus.error.sets.Recall
 
m_SumSqErr - Variable in class si.ijs.kt.clus.error.sets.SubsetAccuracy
 
m_SumSqPredictions - Variable in class si.ijs.kt.clus.ext.beamsearch.ClusBeamSimClassStat
 
m_SumSqPredictions - Variable in class si.ijs.kt.clus.ext.beamsearch.ClusBeamSimRegrStat
 
m_SumSquaredTrueValues - Variable in class si.ijs.kt.clus.error.MSError
 
m_SumSqValues - Variable in class si.ijs.kt.clus.statistic.GISStat
Deprecated.
 
m_SumTrueValues - Variable in class si.ijs.kt.clus.error.MSError
 
m_SumValues - Variable in class si.ijs.kt.clus.statistic.GISStat
Deprecated.
 
m_SumValues - Variable in class si.ijs.kt.clus.statistic.RegressionStat
 
m_SumValues - Variable in class si.ijs.kt.clus.statistic.RegressionStatBinaryNomiss
 
m_SumValuesSpatial - Variable in class si.ijs.kt.clus.statistic.ClassificationStat
 
m_SumWeight - Variable in class si.ijs.kt.clus.error.WAHNDError
 
m_SumWeight - Variable in class si.ijs.kt.clus.statistic.ClusStatistic
The weighted sum of all examples
m_SumWeightLabeled - Variable in class si.ijs.kt.clus.statistic.ClusStatistic
 
m_SumWeights - Variable in class si.ijs.kt.clus.statistic.ClusStatistic
 
m_SVarS - Variable in class si.ijs.kt.clus.statistic.SumPairwiseDistancesStat
 
m_T1 - Variable in class si.ijs.kt.clus.ext.ilevelc.ILevelConstraint
 
m_T2 - Variable in class si.ijs.kt.clus.ext.ilevelc.ILevelConstraint
 
m_Table - Variable in class si.ijs.kt.clus.addon.hmc.HMCAverageSingleClass.HMCAverageSingleClass
 
m_Table - Variable in class si.ijs.kt.clus.addon.hmc.HMCNodeWiseModels.hmcnwmodels.HMCNodeWiseModels
 
m_Table - Variable in class si.ijs.kt.clus.data.type.hierarchies.ClassesAttrType
 
m_Table - Variable in class si.ijs.kt.clus.ext.hierarchical.ClassHierarchyIO
 
m_Target - Variable in class si.ijs.kt.clus.addon.hmc.HMCAverageSingleClass.HMCAverageTreeModel
 
m_Target - Variable in class si.ijs.kt.clus.data.ClusSchema
 
m_Target - Variable in class si.ijs.kt.clus.data.cols.attribute.NominalTarget
 
m_Target - Variable in class si.ijs.kt.clus.data.cols.attribute.NumericTarget
 
m_Target - Variable in class si.ijs.kt.clus.data.cols.attribute.TimeSeriesTarget
 
m_Target - Variable in class si.ijs.kt.clus.distance.complex.tuples.SSPDMatrix
 
m_Target - Variable in class si.ijs.kt.clus.main.settings.section.SettingsAttribute
Section: Attribute *
m_Target - Variable in class si.ijs.kt.clus.model.processor.PredictionWriter
 
m_TargetMode - Static variable in class si.ijs.kt.clus.main.ClusStatManager
 
m_targets - Variable in class si.ijs.kt.clus.util.tools.optimization.OptimizationProblem.TrueValues
 
m_TargetSets - Variable in class si.ijs.kt.clus.addon.sit.mtLearner.ResultsCache
 
m_TargetStat - Variable in class si.ijs.kt.clus.algo.rules.ClusRule
Target statistics of examples covered by the rule.
m_TargetStat - Variable in class si.ijs.kt.clus.algo.rules.ClusRuleSet
Default prediction if no other rule covers the instance.
m_TargetStat - Variable in class si.ijs.kt.clus.algo.tdidt.ClusNode
 
m_TargetStat - Variable in class si.ijs.kt.clus.ext.optiontree.MyNode
 
m_TargetWeights - Variable in class si.ijs.kt.clus.algo.tdidt.tune.CDTuneSizeConstrPruning
 
m_TargetWeights - Variable in class si.ijs.kt.clus.pruning.SizeConstraintPruning
 
m_Test - Variable in class si.ijs.kt.clus.addon.sit.mtLearner.MTLearnerImpl
 
m_Test - Variable in class si.ijs.kt.clus.algo.tdidt.ClusNode
 
m_Test - Variable in class si.ijs.kt.clus.ext.optiontree.TestAndHeuristic
 
m_Test - Variable in class si.ijs.kt.clus.ext.optxval.OptXValGroup
 
m_Test - Variable in class si.ijs.kt.clus.ext.optxval.OptXValSplit
 
m_Test - Variable in class si.ijs.kt.clus.main.ClusRun
 
m_TestData - Variable in class si.ijs.kt.clus.addon.sit.mtLearner.ResultsCache
 
m_TestErr - Variable in class si.ijs.kt.clus.main.ClusSummary
 
m_TestErr - Variable in class si.ijs.kt.clus.model.ClusModelInfo
 
m_TestExtraStat - Variable in class si.ijs.kt.clus.ext.optxval.OptXValIndOV
Deprecated.
 
m_TestModelProc - Variable in class si.ijs.kt.clus.model.ClusModelInfo
 
m_TestPreds - Variable in class si.ijs.kt.clus.model.ClusModelInfo
 
m_Tests - Variable in class si.ijs.kt.clus.algo.rules.ClusRule
 
m_Tests - Variable in class si.ijs.kt.clus.ext.optiontree.FindBestTests
 
m_TestSel - Variable in class si.ijs.kt.clus.main.ClusRun
 
m_TestStat - Variable in class si.ijs.kt.clus.algo.split.CurrentBestTestAndHeuristic
 
m_TestStat - Variable in class si.ijs.kt.clus.ext.optiontree.TestAndHeuristic
 
m_TestStat - Variable in class si.ijs.kt.clus.ext.optxval.OptXValInduce
 
m_TestType - Variable in class si.ijs.kt.clus.algo.split.CurrentBestTestAndHeuristic
 
m_TestType - Variable in class si.ijs.kt.clus.ext.optiontree.TestAndHeuristic
 
m_Threshold - Variable in class si.ijs.kt.clus.statistic.WHTDStatistic
 
m_Thresholds - Variable in class si.ijs.kt.clus.error.common.multiscore.MultiScore
 
m_Thresholds - Variable in class si.ijs.kt.clus.error.mlc.MLROCAndPRCurve
 
m_Thresholds - Variable in class si.ijs.kt.clus.error.mlcForHmlc.MLROCAndPRCurve
 
m_Thresholds - Variable in class si.ijs.kt.clus.error.ROCAndPRCurve
 
m_Thresholds - Variable in class si.ijs.kt.clus.ext.hierarchical.HierClassTresholdPruner
 
m_Thresholds - Variable in class si.ijs.kt.clus.statistic.ClassificationStat
 
m_Time - Variable in class si.ijs.kt.clus.algo.tdidt.ClusNode
 
m_Time - Variable in class si.ijs.kt.clus.ext.optxval.OptXValBinTree
 
m_Time - Variable in class si.ijs.kt.clus.ext.optxval.OptXValNode
 
m_TimeHeur - Static variable in class si.ijs.kt.clus.main.ClusStat
 
m_TimeSeriesAttrUse - Variable in class si.ijs.kt.clus.data.ClusSchema
 
m_TimeSort - Static variable in class si.ijs.kt.clus.main.ClusStat
 
m_TimeSplit - Static variable in class si.ijs.kt.clus.main.ClusStat
 
m_TimeStat - Static variable in class si.ijs.kt.clus.main.ClusStat
 
m_TimeTest - Static variable in class si.ijs.kt.clus.main.ClusStat
 
m_ToPrint - Variable in class si.ijs.kt.clus.model.processor.PredictionWriter
 
m_Tot - Variable in class si.ijs.kt.clus.heuristic.VarianceReductionHeuristicInclMissingValues
 
m_Total - Variable in class si.ijs.kt.clus.util.jeans.util.IntervalCollection
 
m_TotalRuns - Variable in class si.ijs.kt.clus.main.ClusSummary
 
m_TotalStat - Variable in class si.ijs.kt.clus.algo.tdidt.tune.CDTuneSizeConstrPruning
 
m_TotalWeight - Variable in class si.ijs.kt.clus.ext.beamsearch.ClusBeamSearch
 
m_TotalWeight - Variable in class si.ijs.kt.clus.ext.exhaustivesearch.ClusExhaustiveSearch
 
m_TotCorrStat - Variable in class si.ijs.kt.clus.algo.split.CurrentBestTestAndHeuristic
 
m_TotCorrStat - Variable in class si.ijs.kt.clus.ext.optiontree.TestAndHeuristic
 
m_TotSize - Variable in class si.ijs.kt.clus.addon.hmc.HMCAverageSingleClass.HMCAverageNodeWiseModels
 
m_TotSize - Variable in class si.ijs.kt.clus.addon.hmc.HMCAverageSingleClass.HMCAverageSingleClass
 
m_TotSize - Variable in class si.ijs.kt.clus.addon.hmc.HMCAverageSingleClass.HMCAverageTreeModel
 
m_TotStat - Variable in class si.ijs.kt.clus.algo.split.CurrentBestTestAndHeuristic
 
m_TotStat - Variable in class si.ijs.kt.clus.ext.optiontree.TestAndHeuristic
 
m_TotStat - Variable in class si.ijs.kt.clus.ext.optxval.OptXValGroup
 
m_TP - Variable in class si.ijs.kt.clus.error.hmlc.HierClassWiseAccuracy
 
m_Train - Variable in class si.ijs.kt.clus.main.ClusRun
 
m_TrainData - Variable in class si.ijs.kt.clus.heuristic.ClusHeuristic
 
m_TrainDataHeurValue - Variable in class si.ijs.kt.clus.heuristic.ClusHeuristic
 
m_TrainErr - Variable in class si.ijs.kt.clus.main.ClusSummary
 
m_TrainErr - Variable in class si.ijs.kt.clus.model.ClusModelInfo
 
m_TrainErrorScore - Variable in class si.ijs.kt.clus.algo.rules.ClusRule
Average error score of the rule
m_Training - Variable in class si.ijs.kt.clus.statistic.ClassificationStat
 
m_Training - Variable in class si.ijs.kt.clus.statistic.GISStat
Deprecated.
 
m_Training - Variable in class si.ijs.kt.clus.statistic.RegressionStatBinaryNomiss
 
m_TrainModelProc - Variable in class si.ijs.kt.clus.model.ClusModelInfo
 
m_TrainPreds - Variable in class si.ijs.kt.clus.model.ClusModelInfo
 
m_TrainSetStatAttrUse - Variable in class si.ijs.kt.clus.main.ClusStatManager
 
m_TreeErr - Variable in class si.ijs.kt.clus.error.WAHNDError
 
m_TreeErr - Variable in class si.ijs.kt.clus.pruning.BottomUpPruningVSB
 
m_TreeMaxSize - Variable in class si.ijs.kt.clus.main.settings.section.SettingsBeamSearch
 
m_TreeOffset - Variable in class si.ijs.kt.clus.ext.beamsearch.ClusBeamHeuristic
 
m_Trees - Variable in class si.ijs.kt.clus.addon.hmc.HMCAverageSingleClass.HMCAverageTreeModel
 
m_trueValues - Variable in class si.ijs.kt.clus.util.tools.optimization.OptimizationProblem.OptimizationParameter
 
m_TryCreate - Static variable in class si.ijs.kt.clus.util.DebugFile
 
m_TSAttr - Variable in class si.ijs.kt.clus.data.ClusSchema
 
m_TTimeHeur - Static variable in class si.ijs.kt.clus.main.ClusStat
 
m_TTimeSort - Static variable in class si.ijs.kt.clus.main.ClusStat
 
m_TTimeSplit - Static variable in class si.ijs.kt.clus.main.ClusStat
 
m_TTimeStat - Static variable in class si.ijs.kt.clus.main.ClusStat
 
m_TTimeTest - Static variable in class si.ijs.kt.clus.main.ClusStat
 
m_TTimeTotal - Static variable in class si.ijs.kt.clus.main.ClusStat
 
m_TuneFolds - Variable in class si.ijs.kt.clus.main.settings.section.SettingsModel
 
m_Tuple - Variable in class si.ijs.kt.clus.algo.kNN.methods.vpTree.VPItem
 
m_Tuple - Variable in class si.ijs.kt.clus.ext.hierarchical.ClassesTuple
 
m_TuplePositions - Variable in class si.ijs.kt.clus.ext.ensemble.ClusEnsembleInduceOptimization
The keys are (hashes of) DataTuples, which are mapped to the position of the tuple in the predictions
m_Tuples - Variable in class si.ijs.kt.clus.algo.kNN.methods.kdTree.KDNode
 
m_Type - Variable in class si.ijs.kt.clus.data.cols.attribute.NominalAttrBase
 
m_Type - Variable in class si.ijs.kt.clus.data.cols.attribute.NumericAttrBase
 
m_Type - Variable in class si.ijs.kt.clus.data.cols.attribute.TimeSeriesAttrBase
 
m_Type - Variable in class si.ijs.kt.clus.ext.hierarchical.ClassHierarchy
 
m_Type - Variable in class si.ijs.kt.clus.ext.hierarchical.ClassHierarchyPreproc
 
m_Type - Variable in class si.ijs.kt.clus.ext.ilevelc.ILevelConstraint
 
m_Type - Variable in class si.ijs.kt.clus.ext.optxval.SoftNumericTest
 
m_Type - Variable in class si.ijs.kt.clus.model.test.ClusRuleConstraintInduceTest
 
m_Type - Variable in class si.ijs.kt.clus.model.test.NominalTest
 
m_Type - Variable in class si.ijs.kt.clus.model.test.NumericTest
 
m_Type - Variable in class si.ijs.kt.clus.model.test.SubsetTest
 
m_Type - Variable in class si.ijs.kt.clus.util.jeans.io.ini.INIFileNominal
 
m_Type - Variable in class si.ijs.kt.clus.util.jeans.io.ini.INIFileNominalOrDoubleOrVector
 
m_Type - Variable in class si.ijs.kt.clus.util.jeans.io.ini.INIFileNominalOrIntOrVector
 
m_U1 - Variable in class si.ijs.kt.clus.pruning.CartPruning
 
m_U2 - Variable in class si.ijs.kt.clus.pruning.CartPruning
 
m_UnknownFreq - Variable in class si.ijs.kt.clus.algo.split.CurrentBestTestAndHeuristic
 
m_UnknownFreq - Variable in class si.ijs.kt.clus.ext.optiontree.TestAndHeuristic
 
m_UnlabeledData - Variable in class si.ijs.kt.clus.main.ClusRun
 
m_UseHier - Static variable in class si.ijs.kt.clus.Clus
 
m_Validated - Variable in class si.ijs.kt.clus.algo.rules.ClusRulesFromTree
Has something to do with prediction validity.
m_Validation - Variable in class si.ijs.kt.clus.statistic.WHTDStatistic
 
m_ValidErr - Variable in class si.ijs.kt.clus.main.ClusSummary
 
m_ValidErr - Variable in class si.ijs.kt.clus.model.ClusModelInfo
 
m_ValidModelProc - Variable in class si.ijs.kt.clus.model.ClusModelInfo
 
m_Value - Variable in class si.ijs.kt.clus.error.ICVPairwiseDistancesError
 
m_Value - Variable in class si.ijs.kt.clus.ext.beamsearch.ClusBeamModel
 
m_Value - Variable in class si.ijs.kt.clus.util.jeans.io.ini.INIFileBool
 
m_Value - Variable in class si.ijs.kt.clus.util.jeans.io.ini.INIFileDouble
 
m_Value - Variable in class si.ijs.kt.clus.util.jeans.io.ini.INIFileInt
 
m_Value - Variable in class si.ijs.kt.clus.util.jeans.io.ini.INIFileString
 
m_Value - Variable in class si.ijs.kt.clus.util.jeans.io.ini.INIFileStringOrDouble
 
m_Value - Variable in class si.ijs.kt.clus.util.jeans.io.ini.INIFileStringOrInt
 
m_Value - Variable in class si.ijs.kt.clus.util.jeans.util.list.MyIntList
 
m_Values - Variable in class si.ijs.kt.clus.data.type.primitive.NominalAttrType
 
m_Values - Variable in class si.ijs.kt.clus.error.BinaryPredictionList
Either empty list or sorted list of values of m_ValueSet
m_Values - Variable in class si.ijs.kt.clus.error.mlc.MLROCAndPRCurve
 
m_Values - Variable in class si.ijs.kt.clus.error.mlcForHmlc.MLROCAndPRCurve
 
m_Values - Variable in class si.ijs.kt.clus.error.ROCAndPRCurve
 
m_Values - Variable in class si.ijs.kt.clus.model.test.SubsetTest
 
m_Values - Variable in class si.ijs.kt.clus.util.jeans.io.ini.INIFileNominal
 
m_ValueSet - Variable in class si.ijs.kt.clus.error.BinaryPredictionList
Hash map with key: value pairs that are of form (hash of) x: x
m_ValueToName - Variable in class si.ijs.kt.clus.util.jeans.io.ini.INIFileInt
 
m_ValueWithDefault - Variable in class si.ijs.kt.clus.error.ICVPairwiseDistancesError
 
m_Verbose - Variable in class si.ijs.kt.clus.ext.beamsearch.ClusBeamSearch
 
m_Verbose - Variable in class si.ijs.kt.clus.ext.exhaustivesearch.ClusExhaustiveSearch
 
m_View - Variable in class si.ijs.kt.clus.data.rows.FileTupleIterator
 
m_Visitor - Variable in class si.ijs.kt.clus.algo.rules.ClusRule
 
m_Visitor - Variable in class si.ijs.kt.clus.algo.tdidt.ClusNode
 
m_VPitem - Variable in class si.ijs.kt.clus.algo.kNN.methods.vpTree.VPNode
 
m_VSB - Variable in class si.ijs.kt.clus.pruning.SequencePruningVSB
 
m_WAvgAUPRC - Variable in class si.ijs.kt.clus.error.hmlc.HierErrorMeasures
 
m_WAvgAUPRC - Variable in class si.ijs.kt.clus.error.mlc.MLROCAndPRCurve
 
m_WAvgAUPRC - Variable in class si.ijs.kt.clus.error.mlcForHmlc.MLROCAndPRCurve
 
m_Weight - Variable in class si.ijs.kt.clus.data.rows.DataTuple
Weight of the tuple.
m_Weight - Variable in class si.ijs.kt.clus.error.WAHNDError
 
m_weights - Variable in class si.ijs.kt.clus.util.tools.optimization.gd.GDAlgorithm
Current weights
m_Weights - Variable in class si.ijs.kt.clus.data.attweights.ClusAttributeWeights
 
m_Weights - Variable in class si.ijs.kt.clus.distance.hierarchies.HierWeightSPath
 
m_Weights - Variable in class si.ijs.kt.clus.distance.hierarchies.HierWPenalty
 
m_Weights - Variable in class si.ijs.kt.clus.error.MSError
 
m_Weights - Variable in class si.ijs.kt.clus.error.MSNominalError
 
m_Weights - Variable in class si.ijs.kt.clus.error.sets.Accuracy
 
m_Weights - Variable in class si.ijs.kt.clus.error.sets.F1Score
 
m_Weights - Variable in class si.ijs.kt.clus.error.sets.HammingLossError
 
m_Weights - Variable in class si.ijs.kt.clus.error.sets.Precision
 
m_Weights - Variable in class si.ijs.kt.clus.error.sets.Recall
 
m_Weights - Variable in class si.ijs.kt.clus.error.sets.SubsetAccuracy
 
m_Weights - Variable in class si.ijs.kt.clus.ext.hierarchical.ClassHierarchy
 
m_Weights - Variable in class si.ijs.kt.clus.main.settings.section.SettingsAttribute
 
m_Weights - Variable in class si.ijs.kt.clus.pruning.CartPruning
 
m_Weights - Variable in class si.ijs.kt.clus.pruning.SequencePruningVSB
 
m_WriteCurves - Variable in class si.ijs.kt.clus.error.hmlc.HierErrorMeasures
 
m_WriteCurves - Variable in class si.ijs.kt.clus.main.settings.section.SettingsOutput
 
m_WriteErrorFile - Variable in class si.ijs.kt.clus.main.settings.section.SettingsOutput
 
m_WriteModelFile - Variable in class si.ijs.kt.clus.main.settings.section.SettingsOutput
 
m_WriteOOBFile - Variable in class si.ijs.kt.clus.main.settings.section.SettingsOutput
 
m_WritePerBagModelFiles - Variable in class si.ijs.kt.clus.main.settings.section.SettingsOutput
 
m_WritePredictions - Variable in class si.ijs.kt.clus.main.settings.section.SettingsOutput
Write test/train predictions to files
m_Writer - Variable in class si.ijs.kt.clus.addon.sit.ErrorOutput
 
m_Writer - Variable in class si.ijs.kt.clus.algo.tdidt.processor.NodeIDWriter
 
m_Writer - Variable in class si.ijs.kt.clus.main.ClusOutput
 
m_Writer - Variable in class si.ijs.kt.clus.model.processor.ClusEnsemblePredictionWriter
 
m_Writer - Variable in class si.ijs.kt.clus.model.processor.PredictionWriter
 
m_Writer - Static variable in class si.ijs.kt.clus.util.DebugFile
 
m_Writer - Variable in class si.ijs.kt.clus.util.jeans.io.MyFile
 
m_XValSel - Variable in class si.ijs.kt.clus.addon.sit.mtLearner.MTLearnerImpl
 
m_ZAlpha - Variable in class si.ijs.kt.clus.heuristic.EncodingCost
 
M5 - Enum constant in enum class si.ijs.kt.clus.main.settings.section.SettingsTree.PruningMethod
 
M5Multi - Enum constant in enum class si.ijs.kt.clus.main.settings.section.SettingsTree.PruningMethod
 
M5Pruner - Class in si.ijs.kt.clus.pruning
 
M5Pruner(ClusAttributeWeights, double) - Constructor for class si.ijs.kt.clus.pruning.M5Pruner
 
M5PrunerMulti - Class in si.ijs.kt.clus.pruning
 
M5PrunerMulti(ClusAttributeWeights, double) - Constructor for class si.ijs.kt.clus.pruning.M5PrunerMulti
 
MacroFOne - Class in si.ijs.kt.clus.error.mlc
 
MacroFOne - Class in si.ijs.kt.clus.error.mlcForHmlc
 
MacroFOne - Enum constant in enum class si.ijs.kt.clus.main.settings.section.SettingsMLC.MultiLabelMeasures
 
MacroFOne(int) - Constructor for class si.ijs.kt.clus.error.mlcForHmlc.MacroFOne
 
MacroFOne(ClusErrorList, NominalAttrType[]) - Constructor for class si.ijs.kt.clus.error.mlc.MacroFOne
 
MacroPrecision - Class in si.ijs.kt.clus.error.mlc
 
MacroPrecision - Class in si.ijs.kt.clus.error.mlcForHmlc
 
MacroPrecision - Enum constant in enum class si.ijs.kt.clus.main.settings.section.SettingsMLC.MultiLabelMeasures
 
MacroPrecision(int) - Constructor for class si.ijs.kt.clus.error.mlcForHmlc.MacroPrecision
 
MacroPrecision(ClusErrorList, NominalAttrType[]) - Constructor for class si.ijs.kt.clus.error.mlc.MacroPrecision
 
MacroRecall - Class in si.ijs.kt.clus.error.mlc
 
MacroRecall - Class in si.ijs.kt.clus.error.mlcForHmlc
 
MacroRecall - Enum constant in enum class si.ijs.kt.clus.main.settings.section.SettingsMLC.MultiLabelMeasures
 
MacroRecall(int) - Constructor for class si.ijs.kt.clus.error.mlcForHmlc.MacroRecall
 
MacroRecall(ClusErrorList, NominalAttrType[]) - Constructor for class si.ijs.kt.clus.error.mlc.MacroRecall
 
main(String[]) - Static method in class si.ijs.kt.clus.addon.hmc.ClusAmandaRules.ClusAmandaRules
 
main(String[]) - Static method in class si.ijs.kt.clus.addon.hmc.HMCAverageSingleClass.HMCAverageSingleClass
 
main(String[]) - Static method in class si.ijs.kt.clus.addon.hmc.HMCConvertDAGData.HMCConvertDAGData
 
main(String[]) - Static method in class si.ijs.kt.clus.addon.hmc.HMCConvertToSC.HMCConvertToSC
 
main(String[]) - Static method in class si.ijs.kt.clus.addon.hmc.HMCNodeWiseModels.hmcnwmodels.HMCNodeWiseModels
 
main(String[]) - Static method in class si.ijs.kt.clus.addon.ILevelC.ilevelc.ILevelCGUI
 
main(String[]) - Static method in class si.ijs.kt.clus.addon.sit.Sit
 
main(String[]) - Static method in class si.ijs.kt.clus.Clus
 
main(String[]) - Static method in class si.ijs.kt.clus.util.ClusUtil
 
main(String[]) - Static method in class si.ijs.kt.clus.util.format.ClusFormat
 
main(String[]) - Static method in class si.ijs.kt.clus.util.jeans.math.MathUtil
 
main(String[]) - Static method in class si.ijs.kt.clus.util.jeans.util.MultiDelimStringTokenizer
 
main(String[]) - Static method in class si.ijs.kt.clus.util.jeans.util.sort.DoubleIndexSorter
 
main(String[]) - Static method in class si.ijs.kt.clus.util.tools.ClusShowModelInfo
 
main(String[]) - Static method in class si.ijs.kt.clus.util.tools.hier.GenerateData
Deprecated.
 
main(String[]) - Static method in class si.ijs.kt.clus.util.tools.manual.ManualBuilderMain
 
main(ClusStatManager, OptimizationProblem.OptimizationParameter, ClusRuleSet) - Static method in class si.ijs.kt.clus.util.tools.optimization.gd.CallExternGD
Returns weights
mainTarget - Variable in class si.ijs.kt.clus.addon.sit.searchAlgorithm.SITFitnessFunction
 
Majority - Enum constant in enum class si.ijs.kt.clus.main.settings.section.SettingsEnsemble.EnsembleVotingType
 
makeCurrentBesTestAndHeuristic() - Method in class si.ijs.kt.clus.ext.optiontree.TestAndHeuristic
 
makeEdge(int, int) - Method in class si.ijs.kt.clus.ext.ilevelc.DerivedConstraintsComputer
 
makeForestFromBags(ClusRun, TupleIterator, TupleIterator) - Method in class si.ijs.kt.clus.ext.ensemble.ClusEnsembleInduce
 
makeLeaf() - Method in class si.ijs.kt.clus.algo.tdidt.ClusNode
 
makeLeaf() - Method in class si.ijs.kt.clus.ext.optiontree.ClusOptionNode
 
makeLeaf() - Method in class si.ijs.kt.clus.ext.optiontree.ClusSplitNode
 
makeLeaf() - Method in interface si.ijs.kt.clus.ext.optiontree.Node
 
makeLeaf(int) - Method in class si.ijs.kt.clus.ext.optxval.OptXValGroup
 
makeLeaf(ClusNode) - Method in class si.ijs.kt.clus.algo.tdidt.DepthFirstInduce
 
makeLeaf(ClusNode) - Method in class si.ijs.kt.clus.ext.bestfirst.BestFirstInduce
 
makeNAfterDot(int) - Static method in class si.ijs.kt.clus.util.format.ClusFormat
 
makeNAfterDot2(int) - Static method in class si.ijs.kt.clus.util.format.ClusFormat
Deprecated.
makeNodes() - Method in class si.ijs.kt.clus.ext.optxval.OptXValGroup
 
makeSet(int) - Method in class si.ijs.kt.clus.util.jeans.util.DisjointSetForest
 
makeSets(int) - Method in class si.ijs.kt.clus.util.jeans.util.DisjointSetForest
 
makeString(char, int) - Static method in class si.ijs.kt.clus.util.jeans.util.StringUtils
 
makeUnlabeled() - Method in class si.ijs.kt.clus.data.rows.DataTuple
Set all target values to missing
makeWriter() - Static method in class si.ijs.kt.clus.util.DebugFile
 
Manhattan - Enum constant in enum class si.ijs.kt.clus.main.settings.section.SettingsKNN.Distance
 
ManhattanDistance - Class in si.ijs.kt.clus.distance.primitive
 
ManhattanDistance(SearchDistance, boolean, ClusAttrType[]) - Constructor for class si.ijs.kt.clus.distance.primitive.ManhattanDistance
 
MANUAL_DIR - Static variable in class si.ijs.kt.clus.util.tools.manual.ManualBuilderMain
 
MANUAL_OPTIONS_LISTS_DIR - Static variable in class si.ijs.kt.clus.util.tools.manual.ManualBuilderMain
 
MANUAL_OPTIONS_LISTS_DIR_EXISTING - Static variable in class si.ijs.kt.clus.util.tools.manual.ManualBuilderMain
 
ManualBuilder - Class in si.ijs.kt.clus.util.tools.manual
 
ManualBuilder() - Constructor for class si.ijs.kt.clus.util.tools.manual.ManualBuilder
 
ManualBuilderMain - Class in si.ijs.kt.clus.util.tools.manual
 
ManualBuilderMain() - Constructor for class si.ijs.kt.clus.util.tools.manual.ManualBuilderMain
 
ManualEntry - Class in si.ijs.kt.clus.util.tools.manual
 
ManualEntry(String) - Constructor for class si.ijs.kt.clus.util.tools.manual.ManualEntry
 
ManualSectionEntry - Class in si.ijs.kt.clus.util.tools.manual
 
ManualSectionEntry(String) - Constructor for class si.ijs.kt.clus.util.tools.manual.ManualSectionEntry
 
markStartRecording() - Method in class si.ijs.kt.clus.model.io.ClusTreeReader
 
Matching - Enum constant in enum class si.ijs.kt.clus.main.settings.section.SettingsTree.SetDistance
 
MathUtil - Class in si.ijs.kt.clus.util.jeans.math
 
MathUtil() - Constructor for class si.ijs.kt.clus.util.jeans.math.MathUtil
 
max() - Method in class si.ijs.kt.clus.algo.kNN.distance.valentin.NumericStatistic
 
max() - Method in class si.ijs.kt.clus.ext.timeseries.TimeSeries
 
max(double[]) - Static method in class si.ijs.kt.clus.ext.semisupervised.Helper
Calculates maximum of an array of values
max(double[]) - Static method in class si.ijs.kt.clus.util.jeans.util.array.MDoubleArray
 
Max - Enum constant in enum class si.ijs.kt.clus.main.settings.section.SettingsRules.OptimizationGDMTCombineGradient
GD optimization, combining of targets - combine by taking max gradient.
MAX - Enum constant in enum class si.ijs.kt.clus.main.settings.section.SettingsHMTR.HierarchyAggregationsHMTR
 
max_abs(double[]) - Static method in class si.ijs.kt.clus.util.ClusUtil
 
MAX_ALLOWED_EVOLUTIONS - Variable in class si.ijs.kt.clus.addon.sit.searchAlgorithm.GeneticSearch
 
MAX_BRANCH - Static variable in class si.ijs.kt.clus.util.tools.hier.GenerateData
Deprecated.
 
MAX_CLASS - Static variable in class si.ijs.kt.clus.util.tools.hier.GenerateData
Deprecated.
 
MAX_DEPTH - Static variable in class si.ijs.kt.clus.util.tools.hier.GenerateData
Deprecated.
 
MAX_ERROR - Static variable in class si.ijs.kt.clus.util.tools.hier.GenerateData
Deprecated.
 
MaxAvgPWDistance - Enum constant in enum class si.ijs.kt.clus.main.settings.section.SettingsPhylogeny.PhylogenyCriterion
 
maxes - Static variable in class si.ijs.kt.clus.algo.split.CurrentBestTestAndHeuristic
 
maxHeight(BinaryNode) - Static method in class si.ijs.kt.clus.util.jeans.tree.BinaryNode
 
Maximum - Class in si.ijs.kt.clus.ext.semisupervised.confidence.aggregation
Returns maximum of per-target reliability scores, i.e., an example is considered as reliable as its most reliable component
Maximum - Enum constant in enum class si.ijs.kt.clus.main.settings.section.SettingsSSL.SSLAggregation
 
Maximum() - Constructor for class si.ijs.kt.clus.ext.semisupervised.confidence.aggregation.Maximum
 
MaxLoss - Enum constant in enum class si.ijs.kt.clus.main.settings.section.SettingsRules.OptimizationGDMTCombineGradient
GD optimization, combining of targets - combine by taking the gradient of target with maximal loss.
MaxLossFast - Enum constant in enum class si.ijs.kt.clus.main.settings.section.SettingsRules.OptimizationGDMTCombineGradient
GD optimization, combining of targets - combine by taking the gradient of target with maximal LINEAR loss.
MaxMinPWDistance - Enum constant in enum class si.ijs.kt.clus.main.settings.section.SettingsPhylogeny.PhylogenyCriterion
 
MComparator - Interface in si.ijs.kt.clus.util.jeans.util.sort
 
MDouble - Class in si.ijs.kt.clus.util.jeans.math
 
MDouble() - Constructor for class si.ijs.kt.clus.util.jeans.math.MDouble
 
MDouble(double) - Constructor for class si.ijs.kt.clus.util.jeans.math.MDouble
 
MDouble(String) - Constructor for class si.ijs.kt.clus.util.jeans.math.MDouble
 
MDoubleArray - Class in si.ijs.kt.clus.util.jeans.util.array
 
MDoubleArray() - Constructor for class si.ijs.kt.clus.util.jeans.util.array.MDoubleArray
 
MDoubleArrayComparator - Class in si.ijs.kt.clus.util.jeans.util.array
 
MDoubleArrayComparator(int) - Constructor for class si.ijs.kt.clus.util.jeans.util.array.MDoubleArrayComparator
 
mean() - Method in class si.ijs.kt.clus.algo.kNN.distance.valentin.NominalStatistic
 
mean() - Method in class si.ijs.kt.clus.algo.kNN.distance.valentin.NumericStatistic
 
mean(double[]) - Static method in class si.ijs.kt.clus.util.ClusUtil
 
MEAN_BRANCH - Static variable in class si.ijs.kt.clus.util.tools.hier.GenerateData
Deprecated.
 
meanDistNom(int) - Method in class si.ijs.kt.clus.statistic.CombStat
Returns the weighted sum of mean distances for all nominal attributes.
meanDistNomOne(int) - Method in class si.ijs.kt.clus.statistic.CombStat
Returns the mean distance of values of a nominal attribute from the prototype.
meanEntropy() - Method in class si.ijs.kt.clus.statistic.CombStat
Returns the mean entropy of all nominal attributes.
meanVariance(int) - Method in class si.ijs.kt.clus.statistic.CombStat
Returns the mean variance of all numeric attributes.
median(double[]) - Static method in class si.ijs.kt.clus.ext.semisupervised.Helper
 
MEDIAN - Enum constant in enum class si.ijs.kt.clus.main.settings.section.SettingsHMTR.HierarchyAggregationsHMTR
 
MemoryTupleIterator - Class in si.ijs.kt.clus.data.rows
 
MemoryTupleIterator(RowData) - Constructor for class si.ijs.kt.clus.data.rows.MemoryTupleIterator
 
MemoryTupleIterator(RowData, DataPreprocs) - Constructor for class si.ijs.kt.clus.data.rows.MemoryTupleIterator
 
merge(ManualEntry) - Method in class si.ijs.kt.clus.util.tools.manual.ManualEntry
 
merge(ManualSectionEntry) - Method in class si.ijs.kt.clus.util.tools.manual.ManualSectionEntry
Merge this and other into this
mergeExistingTables(String, String) - Method in class si.ijs.kt.clus.util.tools.manual.ManualBuilder
 
mergeSorted(int[], int[]) - Static method in class si.ijs.kt.clus.util.jeans.util.array.MyIntArray
 
MEstimate - Enum constant in enum class si.ijs.kt.clus.main.settings.section.SettingsTree.Heuristic
 
MICRO - Static variable in class si.ijs.kt.clus.util.ClusUtil
 
MicroFOne - Class in si.ijs.kt.clus.error.mlc
 
MicroFOne - Class in si.ijs.kt.clus.error.mlcForHmlc
 
MicroFOne - Enum constant in enum class si.ijs.kt.clus.main.settings.section.SettingsMLC.MultiLabelMeasures
 
MicroFOne(int) - Constructor for class si.ijs.kt.clus.error.mlcForHmlc.MicroFOne
 
MicroFOne(ClusErrorList, NominalAttrType[]) - Constructor for class si.ijs.kt.clus.error.mlc.MicroFOne
 
MicroPrecision - Class in si.ijs.kt.clus.error.mlc
 
MicroPrecision - Class in si.ijs.kt.clus.error.mlcForHmlc
 
MicroPrecision - Enum constant in enum class si.ijs.kt.clus.main.settings.section.SettingsMLC.MultiLabelMeasures
 
MicroPrecision(int) - Constructor for class si.ijs.kt.clus.error.mlcForHmlc.MicroPrecision
 
MicroPrecision(ClusErrorList, NominalAttrType[]) - Constructor for class si.ijs.kt.clus.error.mlc.MicroPrecision
 
MicroRecall - Class in si.ijs.kt.clus.error.mlc
 
MicroRecall - Class in si.ijs.kt.clus.error.mlcForHmlc
 
MicroRecall - Enum constant in enum class si.ijs.kt.clus.main.settings.section.SettingsMLC.MultiLabelMeasures
 
MicroRecall(int) - Constructor for class si.ijs.kt.clus.error.mlcForHmlc.MicroRecall
 
MicroRecall(ClusErrorList, NominalAttrType[]) - Constructor for class si.ijs.kt.clus.error.mlc.MicroRecall
 
Middle - Enum constant in enum class si.ijs.kt.clus.main.settings.section.SettingsTree.SplitPositions
 
min() - Method in class si.ijs.kt.clus.algo.kNN.distance.valentin.NumericStatistic
 
min() - Method in class si.ijs.kt.clus.ext.timeseries.TimeSeries
 
min(double[]) - Static method in class si.ijs.kt.clus.ext.semisupervised.Helper
Calculates minimum of an array of values
MIN - Enum constant in enum class si.ijs.kt.clus.main.settings.section.SettingsHMTR.HierarchyAggregationsHMTR
 
MINIMAL_WEIGHT - Static variable in class si.ijs.kt.clus.main.settings.section.SettingsTree
 
Minimum - Class in si.ijs.kt.clus.ext.semisupervised.confidence.aggregation
Returns minimum of per-target reliability scores, i.e., an example is considered as reliable as its least reliable component
Minimum - Enum constant in enum class si.ijs.kt.clus.main.settings.section.SettingsSSL.SSLAggregation
 
Minimum() - Constructor for class si.ijs.kt.clus.ext.semisupervised.confidence.aggregation.Minimum
 
Minkowski - Enum constant in enum class si.ijs.kt.clus.main.settings.section.SettingsTree.TupleDistance
 
MinkowskiDistance - Class in si.ijs.kt.clus.distance.complex.tuples
 
MinkowskiDistance(int, ClusDistance[]) - Constructor for class si.ijs.kt.clus.distance.complex.tuples.MinkowskiDistance
 
MinkowskiDistance(TupleAttrType, int, ClusDistance[]) - Constructor for class si.ijs.kt.clus.distance.complex.tuples.MinkowskiDistance
 
MinMaxNormalization - Class in si.ijs.kt.clus.ext.semisupervised.confidence.normalization
Normalises per-target confidence scores to [0,1].
MinMaxNormalization - Enum constant in enum class si.ijs.kt.clus.main.settings.section.SettingsSSL.SSLNormalization
normalization to [0,1] interval
MinMaxNormalization(int) - Constructor for class si.ijs.kt.clus.ext.semisupervised.confidence.normalization.MinMaxNormalization
 
mins - Static variable in class si.ijs.kt.clus.algo.split.CurrentBestTestAndHeuristic
 
MIntArray - Class in si.ijs.kt.clus.util.jeans.util.array
 
MIntArray() - Constructor for class si.ijs.kt.clus.util.jeans.util.array.MIntArray
 
MIntArray(int) - Constructor for class si.ijs.kt.clus.util.jeans.util.array.MIntArray
 
MinTotBranchLength - Enum constant in enum class si.ijs.kt.clus.main.settings.section.SettingsPhylogeny.PhylogenyCriterion
 
MisclassificationError - Class in si.ijs.kt.clus.error
 
MisclassificationError(ClusErrorList, NominalAttrType[]) - Constructor for class si.ijs.kt.clus.error.MisclassificationError
 
MisclassificationError(ClusErrorList, NominalAttrType[], String) - Constructor for class si.ijs.kt.clus.error.MisclassificationError
 
missing - Variable in class si.ijs.kt.clus.data.rows.RowDataSortHelper
 
MISSING - Static variable in class si.ijs.kt.clus.data.type.primitive.NumericAttrType
 
MissingTargetImputation - Class in si.ijs.kt.clus.ext.imputation
 
MissingTargetImputation() - Constructor for class si.ijs.kt.clus.ext.imputation.MissingTargetImputation
 
mkdir(String) - Static method in class si.ijs.kt.clus.util.jeans.util.FileUtil
 
mkNewGroups(OptXValGroup, MyListIter) - Method in class si.ijs.kt.clus.ext.optxval.OptXValIndNO
 
mkNewGroups(OptXValGroup, MyListIter) - Method in class si.ijs.kt.clus.ext.optxval.OptXValIndOV
Deprecated.
 
MLAccuracy - Class in si.ijs.kt.clus.error.mlc
 
MLAccuracy - Class in si.ijs.kt.clus.error.mlcForHmlc
 
MLAccuracy - Enum constant in enum class si.ijs.kt.clus.main.settings.section.SettingsMLC.MultiLabelMeasures
 
MLAccuracy - Enum constant in enum class si.ijs.kt.clus.main.settings.section.SettingsRelief.MultilabelDistance
 
MLAccuracy() - Constructor for class si.ijs.kt.clus.error.mlcForHmlc.MLAccuracy
 
MLAccuracy(ClusErrorList, NominalAttrType[]) - Constructor for class si.ijs.kt.clus.error.mlc.MLAccuracy
 
MLaverageAUPRC - Class in si.ijs.kt.clus.error.mlc
 
MLaverageAUPRC - Class in si.ijs.kt.clus.error.mlcForHmlc
 
MLaverageAUPRC(int) - Constructor for class si.ijs.kt.clus.error.mlcForHmlc.MLaverageAUPRC
 
MLaverageAUPRC(ClusErrorList, NominalAttrType[]) - Constructor for class si.ijs.kt.clus.error.mlc.MLaverageAUPRC
 
MLaverageAUROC - Class in si.ijs.kt.clus.error.mlc
 
MLaverageAUROC - Class in si.ijs.kt.clus.error.mlcForHmlc
 
MLaverageAUROC(int) - Constructor for class si.ijs.kt.clus.error.mlcForHmlc.MLaverageAUROC
 
MLaverageAUROC(ClusErrorList, NominalAttrType[]) - Constructor for class si.ijs.kt.clus.error.mlc.MLaverageAUROC
 
MlcHmlcSubError - Interface in si.ijs.kt.clus.error.mlcForHmlc
 
MlcMeasuresForHmlc - Class in si.ijs.kt.clus.error.mlcForHmlc
Use if you want to compute MLC-measures in HMLC case.
MlcMeasuresForHmlc(ClusErrorList, ClassHierarchy) - Constructor for class si.ijs.kt.clus.error.mlcForHmlc.MlcMeasuresForHmlc
 
MLFOne - Enum constant in enum class si.ijs.kt.clus.main.settings.section.SettingsMLC.MultiLabelMeasures
 
MLFOne - Enum constant in enum class si.ijs.kt.clus.main.settings.section.SettingsRelief.MultilabelDistance
 
MLFOneMeasure - Class in si.ijs.kt.clus.error.mlc
 
MLFOneMeasure - Class in si.ijs.kt.clus.error.mlcForHmlc
 
MLFOneMeasure() - Constructor for class si.ijs.kt.clus.error.mlcForHmlc.MLFOneMeasure
 
MLFOneMeasure(ClusErrorList, NominalAttrType[]) - Constructor for class si.ijs.kt.clus.error.mlc.MLFOneMeasure
 
MLpooledAUPRC - Class in si.ijs.kt.clus.error.mlc
 
MLpooledAUPRC - Class in si.ijs.kt.clus.error.mlcForHmlc
 
MLpooledAUPRC(int) - Constructor for class si.ijs.kt.clus.error.mlcForHmlc.MLpooledAUPRC
 
MLpooledAUPRC(ClusErrorList, NominalAttrType[]) - Constructor for class si.ijs.kt.clus.error.mlc.MLpooledAUPRC
 
MLPrecision - Class in si.ijs.kt.clus.error.mlc
 
MLPrecision - Class in si.ijs.kt.clus.error.mlcForHmlc
 
MLPrecision - Enum constant in enum class si.ijs.kt.clus.main.settings.section.SettingsMLC.MultiLabelMeasures
 
MLPrecision() - Constructor for class si.ijs.kt.clus.error.mlcForHmlc.MLPrecision
 
MLPrecision(ClusErrorList, NominalAttrType[]) - Constructor for class si.ijs.kt.clus.error.mlc.MLPrecision
 
MLRecall - Class in si.ijs.kt.clus.error.mlc
 
MLRecall - Class in si.ijs.kt.clus.error.mlcForHmlc
 
MLRecall - Enum constant in enum class si.ijs.kt.clus.main.settings.section.SettingsMLC.MultiLabelMeasures
 
MLRecall() - Constructor for class si.ijs.kt.clus.error.mlcForHmlc.MLRecall
 
MLRecall(ClusErrorList, NominalAttrType[]) - Constructor for class si.ijs.kt.clus.error.mlc.MLRecall
 
MLROCAndPRCurve - Class in si.ijs.kt.clus.error.mlc
 
MLROCAndPRCurve - Class in si.ijs.kt.clus.error.mlcForHmlc
 
MLROCAndPRCurve(int) - Constructor for class si.ijs.kt.clus.error.mlcForHmlc.MLROCAndPRCurve
 
MLROCAndPRCurve(ClusErrorList, NominalAttrType[]) - Constructor for class si.ijs.kt.clus.error.mlc.MLROCAndPRCurve
 
MLROCAndPRCurve.CurveType - Enum Class in si.ijs.kt.clus.error.mlcForHmlc
 
MLweightedAUPRC - Class in si.ijs.kt.clus.error.mlc
 
MLweightedAUPRC - Class in si.ijs.kt.clus.error.mlcForHmlc
 
MLweightedAUPRC(int) - Constructor for class si.ijs.kt.clus.error.mlcForHmlc.MLweightedAUPRC
 
MLweightedAUPRC(ClusErrorList, NominalAttrType[]) - Constructor for class si.ijs.kt.clus.error.mlc.MLweightedAUPRC
 
MMatrix - Class in si.ijs.kt.clus.util.jeans.math.matrix
 
MMatrix() - Constructor for class si.ijs.kt.clus.util.jeans.math.matrix.MMatrix
 
MNumber - Class in si.ijs.kt.clus.util.jeans.math
 
MNumber() - Constructor for class si.ijs.kt.clus.util.jeans.math.MNumber
 
modelAlreadyIn(ClusBeamModel) - Method in class si.ijs.kt.clus.ext.beamsearch.ClusBeam
Dragi check if the same tree is already in the beam
modelDone() - Method in class si.ijs.kt.clus.algo.tdidt.processor.NodeIDWriter
 
modelDone() - Method in class si.ijs.kt.clus.model.processor.ClusModelProcessor
 
modelDone() - Method in class si.ijs.kt.clus.model.processor.ModelProcessorCollection
 
ModelProcessorCollection - Class in si.ijs.kt.clus.model.processor
 
ModelProcessorCollection() - Constructor for class si.ijs.kt.clus.model.processor.ModelProcessorCollection
 
modelUpdate(DataTuple, ClusModel) - Method in class si.ijs.kt.clus.algo.rules.ClusCalcRuleErrorProc
 
modelUpdate(DataTuple, ClusModel) - Method in class si.ijs.kt.clus.algo.tdidt.processor.BasicExampleCollector
 
modelUpdate(DataTuple, ClusModel) - Method in class si.ijs.kt.clus.algo.tdidt.processor.NodeIDWriter
 
modelUpdate(DataTuple, ClusModel) - Method in class si.ijs.kt.clus.model.processor.CalcStatisticProcessor
 
modelUpdate(DataTuple, ClusModel) - Method in class si.ijs.kt.clus.model.processor.ClusModelProcessor
 
modelUpdate(DataTuple, ClusModel) - Method in class si.ijs.kt.clus.model.processor.PredictionWriter
 
modelUpdate(DataTuple, ClusModel) - Method in class si.ijs.kt.clus.pruning.TreeErrorComputer
 
Modified - Enum constant in enum class si.ijs.kt.clus.main.settings.section.SettingsTree.SpatialMatrixType
 
modifiedEntropy(int) - Method in class si.ijs.kt.clus.statistic.ClassificationStat
 
ModifiedEntropy - Enum constant in enum class si.ijs.kt.clus.main.settings.section.SettingsTree.EntropyType
 
ModifiedGainHeuristic - Class in si.ijs.kt.clus.ext.semisupervised
 
ModifiedGainHeuristic(ClusStatistic, Settings) - Constructor for class si.ijs.kt.clus.ext.semisupervised.ModifiedGainHeuristic
 
modifyGradients(int[], ArrayList<Double>) - Method in class si.ijs.kt.clus.util.tools.optimization.gd.GDProblem
Recompute the gradients new iteration.
modifyGradientSquared(int[]) - Method in class si.ijs.kt.clus.util.tools.optimization.gd.GDProblem
Recomputation of gradients for least squares loss function
MoranIndex1(float) - Static method in class si.ijs.kt.clus.addon.network.PredictionAnalyzer
 
MoranIndex11(float) - Static method in class si.ijs.kt.clus.addon.network.PredictionAnalyzer
 
MoranIndex2(float) - Static method in class si.ijs.kt.clus.addon.network.PredictionAnalyzer
 
MoranIndex22(float) - Static method in class si.ijs.kt.clus.addon.network.PredictionAnalyzer
 
MORE - Static variable in interface si.ijs.kt.clus.util.jeans.util.sort.MComparator
 
Morishita - Enum constant in enum class si.ijs.kt.clus.main.settings.section.SettingsTree.Heuristic
 
mousePressed(MouseEvent) - Method in class si.ijs.kt.clus.addon.ILevelC.ilevelc.ILevelCGUI.ILevelMouseListener
 
MPCKMeansWrapper - Class in si.ijs.kt.clus.ext.ilevelc
 
MPCKMeansWrapper(ClusStatManager) - Constructor for class si.ijs.kt.clus.ext.ilevelc.MPCKMeansWrapper
 
MSError - Class in si.ijs.kt.clus.error
 
MSError(ClusErrorList, NumericAttrType[]) - Constructor for class si.ijs.kt.clus.error.MSError
 
MSError(ClusErrorList, NumericAttrType[], String) - Constructor for class si.ijs.kt.clus.error.MSError
 
MSError(ClusErrorList, NumericAttrType[], ClusAttributeWeights) - Constructor for class si.ijs.kt.clus.error.MSError
 
MSError(ClusErrorList, NumericAttrType[], ClusAttributeWeights, boolean) - Constructor for class si.ijs.kt.clus.error.MSError
 
MSError(ClusErrorList, NumericAttrType[], ClusAttributeWeights, boolean, String) - Constructor for class si.ijs.kt.clus.error.MSError
 
MSError(ClusErrorList, NumericAttrType[], ClusAttributeWeights, String) - Constructor for class si.ijs.kt.clus.error.MSError
 
MSNominalError - Class in si.ijs.kt.clus.error
 
MSNominalError(ClusErrorList, NominalAttrType[], ClusAttributeWeights) - Constructor for class si.ijs.kt.clus.error.MSNominalError
 
MSNominalError(ClusErrorList, NominalAttrType[], ClusAttributeWeights, String) - Constructor for class si.ijs.kt.clus.error.MSNominalError
 
MSortable - Interface in si.ijs.kt.clus.util.jeans.util.sort
 
MSorter - Class in si.ijs.kt.clus.util.jeans.util.sort
Deprecated.
MSorter() - Constructor for class si.ijs.kt.clus.util.jeans.util.sort.MSorter
Deprecated.
 
MSStringTokenizer - Class in si.ijs.kt.clus.util.jeans.util
 
MSStringTokenizer(String) - Constructor for class si.ijs.kt.clus.util.jeans.util.MSStringTokenizer
 
MStreamTokenizer - Class in si.ijs.kt.clus.util.jeans.util
 
MStreamTokenizer() - Constructor for class si.ijs.kt.clus.util.jeans.util.MStreamTokenizer
 
MStreamTokenizer(InputStream) - Constructor for class si.ijs.kt.clus.util.jeans.util.MStreamTokenizer
 
MStreamTokenizer(Reader) - Constructor for class si.ijs.kt.clus.util.jeans.util.MStreamTokenizer
 
MStreamTokenizer(String) - Constructor for class si.ijs.kt.clus.util.jeans.util.MStreamTokenizer
 
MStringSorter - Class in si.ijs.kt.clus.util.jeans.util.sort
 
MStringSorter() - Constructor for class si.ijs.kt.clus.util.jeans.util.sort.MStringSorter
 
MStringTokenizer - Class in si.ijs.kt.clus.util.jeans.util
 
MStringTokenizer() - Constructor for class si.ijs.kt.clus.util.jeans.util.MStringTokenizer
 
MSymMatrix - Class in si.ijs.kt.clus.util.jeans.math.matrix
 
MSymMatrix(int) - Constructor for class si.ijs.kt.clus.util.jeans.math.matrix.MSymMatrix
 
MTLearner - Interface in si.ijs.kt.clus.addon.sit.mtLearner
 
MTLearnerImpl - Class in si.ijs.kt.clus.addon.sit.mtLearner
 
MTLearnerImpl() - Constructor for class si.ijs.kt.clus.addon.sit.mtLearner.MTLearnerImpl
 
MTokenizer - Class in si.ijs.kt.clus.util.jeans.util
 
MTokenizer() - Constructor for class si.ijs.kt.clus.util.jeans.util.MTokenizer
 
MULTI_LABEL_CLASSIFICATION - Enum constant in enum class si.ijs.kt.clus.main.ClusStatManager.TargetType
 
MultiDelimStringTokenizer - Class in si.ijs.kt.clus.util.jeans.util
 
MultiIwithNeighbours - Enum constant in enum class si.ijs.kt.clus.main.settings.section.SettingsTree.SpatialMeasure
 
MultiLabelDistance - Class in si.ijs.kt.clus.distance.primitive.relief
 
MultiLabelDistance(SettingsRelief.MultilabelDistance, ClusAttrType[], double[]) - Constructor for class si.ijs.kt.clus.distance.primitive.relief.MultiLabelDistance
 
multiply(MNumber) - Method in class si.ijs.kt.clus.util.jeans.math.MNumber
 
multiplyWeight(double) - Method in class si.ijs.kt.clus.data.rows.DataTuple
 
multiScore(double[]) - Method in class si.ijs.kt.clus.error.common.multiscore.MultiScore
 
multiScore(double[], int[]) - Method in class si.ijs.kt.clus.error.common.multiscore.MultiScore
 
MultiScore - Class in si.ijs.kt.clus.error.common.multiscore
 
MultiScore(ClusSchema, Settings) - Constructor for class si.ijs.kt.clus.error.common.multiscore.MultiScore
 
MultiScoreStat - Class in si.ijs.kt.clus.error.common.multiscore
 
MultiScoreStat(Settings, ClusStatistic, MultiScore) - Constructor for class si.ijs.kt.clus.error.common.multiscore.MultiScoreStat
 
MultiScoreWrapper - Class in si.ijs.kt.clus.error.common.multiscore
 
MultiScoreWrapper(ClusNominalError, NumericAttrType[]) - Constructor for class si.ijs.kt.clus.error.common.multiscore.MultiScoreWrapper
 
MultiVariateMoranI - Enum constant in enum class si.ijs.kt.clus.main.settings.section.SettingsTree.SpatialMeasure
 
mustNotComputeTestError(int) - Method in class si.ijs.kt.clus.main.settings.section.SettingsKNN
 
mustNotComputeTrainingError(int) - Method in class si.ijs.kt.clus.main.settings.section.SettingsKNN
 
MVectorSorter - Class in si.ijs.kt.clus.util.jeans.util.sort
 
MVectorSorter() - Constructor for class si.ijs.kt.clus.util.jeans.util.sort.MVectorSorter
 
MyArray - Class in si.ijs.kt.clus.util.jeans.util
 
MyArray() - Constructor for class si.ijs.kt.clus.util.jeans.util.MyArray
 
MyArray(int) - Constructor for class si.ijs.kt.clus.util.jeans.util.MyArray
 
MyFile - Class in si.ijs.kt.clus.util.jeans.io
 
MyFile(String) - Constructor for class si.ijs.kt.clus.util.jeans.io.MyFile
 
MyFile(String, boolean) - Constructor for class si.ijs.kt.clus.util.jeans.io.MyFile
 
MyIntArray - Class in si.ijs.kt.clus.util.jeans.util.array
 
MyIntArray() - Constructor for class si.ijs.kt.clus.util.jeans.util.array.MyIntArray
 
MyIntArray(int) - Constructor for class si.ijs.kt.clus.util.jeans.util.array.MyIntArray
 
MyIntArray(int, int, int) - Constructor for class si.ijs.kt.clus.util.jeans.util.array.MyIntArray
 
MyIntList - Class in si.ijs.kt.clus.util.jeans.util.list
 
MyIntList(int) - Constructor for class si.ijs.kt.clus.util.jeans.util.list.MyIntList
 
MyList - Class in si.ijs.kt.clus.util.jeans.util.list
 
MyList() - Constructor for class si.ijs.kt.clus.util.jeans.util.list.MyList
 
MyListIter - Class in si.ijs.kt.clus.util.jeans.util.list
 
MyListIter() - Constructor for class si.ijs.kt.clus.util.jeans.util.list.MyListIter
 
MyListIter(MyList) - Constructor for class si.ijs.kt.clus.util.jeans.util.list.MyListIter
 
MyNode - Class in si.ijs.kt.clus.ext.optiontree
 
MyNode - Class in si.ijs.kt.clus.util.jeans.tree
 
MyNode() - Constructor for class si.ijs.kt.clus.ext.optiontree.MyNode
 
MyNode() - Constructor for class si.ijs.kt.clus.util.jeans.tree.MyNode
 
MyNode(MyNode) - Constructor for class si.ijs.kt.clus.ext.optiontree.MyNode
 
MyNode(Node) - Constructor for class si.ijs.kt.clus.util.jeans.tree.MyNode
 
MyReader() - Constructor for class si.ijs.kt.clus.data.type.primitive.IndexAttrType.MyReader
 
MySerializable() - Constructor for class si.ijs.kt.clus.data.type.complex.SetAttrType.MySerializable
 
MySerializable() - Constructor for class si.ijs.kt.clus.data.type.complex.TupleAttrType.MySerializable
 
MySerializable() - Constructor for class si.ijs.kt.clus.data.type.hierarchies.ClassesAttrType.MySerializable
 
MySerializable() - Constructor for class si.ijs.kt.clus.data.type.hierarchies.FlatClassesAttrType.MySerializable
 
MySerializable() - Constructor for class si.ijs.kt.clus.data.type.primitive.IntegerAttrType.MySerializable
 
MySerializable() - Constructor for class si.ijs.kt.clus.data.type.primitive.NominalAttrType.MySerializable
 
MySerializable() - Constructor for class si.ijs.kt.clus.data.type.primitive.NumericAttrType.MySerializable
 
MySerializable() - Constructor for class si.ijs.kt.clus.data.type.primitive.SparseNumericAttrType.MySerializable
 
MySerializable() - Constructor for class si.ijs.kt.clus.data.type.primitive.StringAttrType.MySerializable
 
MySerializable() - Constructor for class si.ijs.kt.clus.data.type.primitive.TimeSeriesAttrType.MySerializable
 
MySparseVector - Interface in si.ijs.kt.clus.util.jeans.math.matrix
 

N

N_EQ - Static variable in class si.ijs.kt.clus.model.test.NodeTest
 
N2 - Enum constant in enum class si.ijs.kt.clus.main.settings.section.SettingsTimeSeries.TimeSeriesPrototypeComplexity
 
NamedThreadFactory - Class in si.ijs.kt.clus.algo.rules.probabilistic
 
NamedThreadFactory(String) - Constructor for class si.ijs.kt.clus.algo.rules.probabilistic.NamedThreadFactory
 
NaN - Static variable in class si.ijs.kt.clus.util.ClusUtil
 
NANO - Static variable in class si.ijs.kt.clus.util.ClusUtil
 
NArySplit - Class in si.ijs.kt.clus.algo.split
 
NArySplit() - Constructor for class si.ijs.kt.clus.algo.split.NArySplit
 
NB_DATA - Static variable in class si.ijs.kt.clus.util.tools.hier.GenerateData
Deprecated.
 
NB_RANDOM - Static variable in class si.ijs.kt.clus.util.ClusRandom
 
nbRandomRules() - Method in class si.ijs.kt.clus.main.settings.section.SettingsRules
How many random rules are wanted by RandomRules in the settings file.
nbVisitors - Static variable in class si.ijs.kt.clus.util.jeans.util.Visitable
 
nearest - Variable in class si.ijs.kt.clus.algo.kNN.distance.distanceWeighting.DistanceWeighting
Nearest k tuples found
NearestNeighbour - Class in si.ijs.kt.clus.ext.featureRanking.relief.nearestNeighbour
 
NearestNeighbour(int, double) - Constructor for class si.ijs.kt.clus.ext.featureRanking.relief.nearestNeighbour.NearestNeighbour
Construct nearest neighbour from the two parameters that define it.
NearestNeighbour(int, double, double) - Constructor for class si.ijs.kt.clus.ext.featureRanking.relief.nearestNeighbour.NearestNeighbour
Deprecated.
NearestNeighbour(String) - Constructor for class si.ijs.kt.clus.ext.featureRanking.relief.nearestNeighbour.NearestNeighbour
Construct nearest neighbour from a string in a file.
needsHierarchyProcessors() - Method in class si.ijs.kt.clus.main.ClusStatManager
 
needsInternalNodes() - Method in class si.ijs.kt.clus.model.processor.CalcStatisticProcessor
 
needsInternalNodes() - Method in class si.ijs.kt.clus.model.processor.ClusModelProcessor
 
needsInternalNodes() - Method in class si.ijs.kt.clus.pruning.TreeErrorComputer
 
needsModelUpdate() - Method in class si.ijs.kt.clus.algo.rules.ClusCalcRuleErrorProc
 
needsModelUpdate() - Method in class si.ijs.kt.clus.algo.tdidt.processor.BasicExampleCollector
 
needsModelUpdate() - Method in class si.ijs.kt.clus.algo.tdidt.processor.NodeIDWriter
 
needsModelUpdate() - Method in class si.ijs.kt.clus.model.processor.CalcStatisticProcessor
 
needsModelUpdate() - Method in class si.ijs.kt.clus.model.processor.ClusModelProcessor
 
needsModelUpdate() - Method in class si.ijs.kt.clus.model.processor.ModelProcessorCollection
 
needsModelUpdate() - Method in class si.ijs.kt.clus.model.processor.PredictionWriter
 
needsModelUpdate() - Method in class si.ijs.kt.clus.pruning.TreeErrorComputer
 
NEG - Static variable in class si.ijs.kt.clus.ext.ilevelc.ILevelCHeurStat
 
NEGATIVE_CLASS - Static variable in class si.ijs.kt.clus.data.type.primitive.NominalAttrType
 
newClusStatistic() - Method in class si.ijs.kt.clus.ext.optiontree.ClusOptionNode
 
newEvaluations(int) - Method in class si.ijs.kt.clus.ext.beamsearch.ClusBeamAttrSelector
 
newInstance(Class<T>) - Method in class si.ijs.kt.clus.util.cloner.Cloner
creates a new instance of c.
newInstance(Class<T>) - Method in interface si.ijs.kt.clus.util.cloner.IInstantiationStrategy
 
newInstance(Class<T>) - Method in class si.ijs.kt.clus.util.cloner.ObjenesisInstantiationStrategy
 
newThread(Runnable) - Method in class si.ijs.kt.clus.algo.rules.probabilistic.NamedThreadFactory
 
nextDouble(int) - Static method in class si.ijs.kt.clus.util.ClusRandom
 
nextDouble(int) - Method in class si.ijs.kt.clus.util.ClusRandomNonstatic
 
nextElement() - Method in class si.ijs.kt.clus.util.jeans.util.EnumerationGenerator
Returns the next element in the Enumeration.
nextElement() - Method in class si.ijs.kt.clus.util.jeans.util.MSStringTokenizer
 
nextGroupToken() - Method in class si.ijs.kt.clus.util.jeans.util.MSStringTokenizer
 
nextInt() - Method in class si.ijs.kt.clus.util.jeans.util.IntervalCollection
 
nextInt(int) - Method in class si.ijs.kt.clus.util.ClusRandomNonstatic
 
nextInt(int, int) - Static method in class si.ijs.kt.clus.util.ClusRandom
 
nextInt(int, int) - Method in class si.ijs.kt.clus.util.ClusRandomNonstatic
 
nextInt(int, int, int) - Static method in class si.ijs.kt.clus.util.ClusRandom
 
nextNumberToken() - Method in class si.ijs.kt.clus.util.jeans.util.MSStringTokenizer
 
nextPrediction(int, boolean, boolean) - Method in class si.ijs.kt.clus.error.hmlc.HierClassWiseAccuracy
 
nextToken() - Method in class si.ijs.kt.clus.util.jeans.util.MSStringTokenizer
 
nextToken() - Method in class si.ijs.kt.clus.util.jeans.util.MultiDelimStringTokenizer
 
NN - Class in si.ijs.kt.clus.algo.kNN.methods
 
NN(DataTuple, double) - Constructor for class si.ijs.kt.clus.algo.kNN.methods.NN
 
NNStack - Class in si.ijs.kt.clus.algo.kNN.methods
Implements simple insertion algorithm for maintaining k nearest neighbors.
NNStack(int) - Constructor for class si.ijs.kt.clus.algo.kNN.methods.NNStack
Construct new stack for storing k nearest neighbors.
No - Enum constant in enum class si.ijs.kt.clus.main.settings.section.SettingsEnsemble.EnsembleBootstrapping
 
No - Enum constant in enum class si.ijs.kt.clus.main.settings.section.SettingsGeneral.ResourceInfoLoad
 
No - Enum constant in enum class si.ijs.kt.clus.main.settings.section.SettingsMLC.MultiLabelThresholdOptimization
 
No - Enum constant in enum class si.ijs.kt.clus.main.settings.section.SettingsOutput.ConvertRules
 
No - Enum constant in enum class si.ijs.kt.clus.main.settings.section.SettingsRules.OptimizationGDAddLinearTerms
Do not add linear terms.
No - Enum constant in enum class si.ijs.kt.clus.main.settings.section.SettingsRules.OptimizationLinearTermNormalizeValues
Do not normalize linear terms at all
No - Enum constant in enum class si.ijs.kt.clus.main.settings.section.SettingsRules.OptimizationNormalization
Do not normalize
No - Enum constant in enum class si.ijs.kt.clus.main.settings.SettingsBase.YesNo
 
NO - Static variable in class si.ijs.kt.clus.algo.tdidt.ClusNode
 
NO_ABUNDANCE - Static variable in class si.ijs.kt.clus.ext.hierarchical.ClassesValue
 
NoClusteringStats - Enum constant in enum class si.ijs.kt.clus.main.settings.section.SettingsTree.TreeOptimizeValues
 
Node - Interface in si.ijs.kt.clus.ext.optiontree
 
Node - Interface in si.ijs.kt.clus.util.jeans.tree
 
NODE_ABUNDANCE - Static variable in class si.ijs.kt.clus.ext.hierarchical.ClassesValue
 
NodeDepthPair - Class in si.ijs.kt.clus.ext.ensemble.container
 
NodeDepthPair(ClusNode, double) - Constructor for class si.ijs.kt.clus.ext.ensemble.container.NodeDepthPair
 
NodeExampleCollector - Class in si.ijs.kt.clus.algo.tdidt.processor
 
NodeExampleCollector(String, boolean, Settings) - Constructor for class si.ijs.kt.clus.algo.tdidt.processor.NodeExampleCollector
 
NodeIDWriter - Class in si.ijs.kt.clus.algo.tdidt.processor
 
NodeIDWriter(String, boolean, Settings) - Constructor for class si.ijs.kt.clus.algo.tdidt.processor.NodeIDWriter
 
NodePrototypes - Enum constant in enum class si.ijs.kt.clus.main.settings.section.SettingsOutput.ShowInfo
 
nodes - Variable in class si.ijs.kt.clus.heuristic.EncodingCost
 
nodes - Variable in class si.ijs.kt.clus.util.jeans.tree.SimpleNode
 
nodes - Variable in class si.ijs.kt.clus.util.jeans.tree.VisitableNode
 
NodeTest - Class in si.ijs.kt.clus.model.test
 
NodeTest() - Constructor for class si.ijs.kt.clus.model.test.NodeTest
 
NoInodeStats - Enum constant in enum class si.ijs.kt.clus.main.settings.section.SettingsTree.TreeOptimizeValues
 
Nominal - Enum constant in enum class si.ijs.kt.clus.data.type.ClusAttrType.AttributeType
 
NOMINAL_WEIGHT - Static variable in class si.ijs.kt.clus.main.settings.section.SettingsAttribute
 
NominalAttrBase - Class in si.ijs.kt.clus.data.cols.attribute
 
NominalAttrBase(NominalAttrType) - Constructor for class si.ijs.kt.clus.data.cols.attribute.NominalAttrBase
 
NominalAttribute - Class in si.ijs.kt.clus.data.cols.attribute
 
NominalAttribute(NominalAttrType) - Constructor for class si.ijs.kt.clus.data.cols.attribute.NominalAttribute
 
NominalAttrType - Class in si.ijs.kt.clus.data.type.primitive
Attribute of nominal value.
NominalAttrType(String) - Constructor for class si.ijs.kt.clus.data.type.primitive.NominalAttrType
 
NominalAttrType(String, int) - Constructor for class si.ijs.kt.clus.data.type.primitive.NominalAttrType
 
NominalAttrType(String, String) - Constructor for class si.ijs.kt.clus.data.type.primitive.NominalAttrType
 
NominalAttrType(String, String[]) - Constructor for class si.ijs.kt.clus.data.type.primitive.NominalAttrType
 
NominalAttrType(String, ArrayList<String>) - Constructor for class si.ijs.kt.clus.data.type.primitive.NominalAttrType
 
NominalAttrType.MySerializable - Class in si.ijs.kt.clus.data.type.primitive
 
NominalBasicDistance - Class in si.ijs.kt.clus.algo.kNN.distance.valentin
This class represents the distance between 2 values of a certain Nominal Attribute type.
NominalBasicDistance(Settings) - Constructor for class si.ijs.kt.clus.algo.kNN.distance.valentin.NominalBasicDistance
 
NominalCorrelation - Class in si.ijs.kt.clus.error
 
NominalCorrelation(ClusErrorList, NominalAttrType[], int, int) - Constructor for class si.ijs.kt.clus.error.NominalCorrelation
 
NominalCorrelation(ClusErrorList, NominalAttrType[], int, int, String) - Constructor for class si.ijs.kt.clus.error.NominalCorrelation
 
NominalDistance - Class in si.ijs.kt.clus.distance.primitive.nominal
 
NominalDistance() - Constructor for class si.ijs.kt.clus.distance.primitive.nominal.NominalDistance
 
nominalPredict(int) - Method in class si.ijs.kt.clus.model.test.NodeTest
 
nominalPredict(int) - Method in class si.ijs.kt.clus.model.test.NominalTest
 
nominalPredict(int) - Method in class si.ijs.kt.clus.model.test.SubsetTest
 
nominalPredictWeighted(int) - Method in class si.ijs.kt.clus.model.test.NodeTest
 
nominalPredictWeighted(int) - Method in class si.ijs.kt.clus.model.test.NominalTest
 
nominalPredictWeighted(int) - Method in class si.ijs.kt.clus.model.test.SubsetTest
 
NominalSplit - Class in si.ijs.kt.clus.algo.split
 
NominalSplit() - Constructor for class si.ijs.kt.clus.algo.split.NominalSplit
 
NominalStatistic - Class in si.ijs.kt.clus.algo.kNN.distance.valentin
This class stores some useful statistics for a Nominal Attribute of certain data.
NominalStatistic() - Constructor for class si.ijs.kt.clus.algo.kNN.distance.valentin.NominalStatistic
 
NominalTarget - Class in si.ijs.kt.clus.data.cols.attribute
 
NominalTarget(ColTarget, NominalAttrType, int) - Constructor for class si.ijs.kt.clus.data.cols.attribute.NominalTarget
 
NominalTest - Class in si.ijs.kt.clus.model.test
 
NominalTest(NominalAttrType, double[]) - Constructor for class si.ijs.kt.clus.model.test.NominalTest
 
NominalType - Class in si.ijs.kt.clus.util.jeans.io.range
 
NominalType(String[]) - Constructor for class si.ijs.kt.clus.util.jeans.io.range.NominalType
 
NON_TARGET_WEIGHT - Static variable in class si.ijs.kt.clus.main.settings.section.SettingsAttribute
 
None - Enum constant in enum class si.ijs.kt.clus.Clus.DebugType
 
None - Enum constant in enum class si.ijs.kt.clus.data.type.ClusAttrType.ValueType
 
None - Enum constant in enum class si.ijs.kt.clus.main.settings.section.SettingsData.NormalizeDataValues
 
None - Enum constant in enum class si.ijs.kt.clus.main.settings.section.SettingsTree.PruningMethod
 
NONE - Enum constant in enum class si.ijs.kt.clus.main.ClusStatManager.Mode
 
NONE - Static variable in class si.ijs.kt.clus.main.settings.SettingsBase
 
NoneAdded - Enum constant in enum class si.ijs.kt.clus.main.settings.section.SettingsSSL.SSLStoppingCriteria
If no instance met the UnlabeledCriteria, i.e., no instance was added to the training set
NONELIST - Static variable in class si.ijs.kt.clus.main.settings.SettingsBase
 
NoNormalization - Class in si.ijs.kt.clus.ext.semisupervised.confidence.normalization
Does nothing, no normalization is performed
NoNormalization - Enum constant in enum class si.ijs.kt.clus.main.settings.section.SettingsSSL.SSLNormalization
does nothing, leaves per-target scores as they are
NoNormalization() - Constructor for class si.ijs.kt.clus.ext.semisupervised.confidence.normalization.NoNormalization
 
nonZero(double) - Static method in class si.ijs.kt.clus.heuristic.ClusHeuristic
 
Normal - Enum constant in enum class si.ijs.kt.clus.data.type.ClusAttrType.Status
 
Normalization - Interface in si.ijs.kt.clus.ext.semisupervised.confidence.normalization
Class for normalization of per-target confidence scores
NORMALIZATION_DEFAULT - Static variable in class si.ijs.kt.clus.main.settings.section.SettingsAttribute
 
NORMALIZATIONS - Static variable in class si.ijs.kt.clus.main.settings.section.SettingsAttribute
Section: Attribute - Normalization *
normalize() - Method in class si.ijs.kt.clus.data.cols.ColTarget
 
normalize(double[]) - Method in class si.ijs.kt.clus.error.common.ClusError
 
normalize(Map<Integer, double[]>) - Method in class si.ijs.kt.clus.ext.semisupervised.confidence.normalization.MinMaxNormalization
The score x is normalised as follows: x_norm = (x - min)/(max - min)
normalize(Map<Integer, double[]>) - Method in class si.ijs.kt.clus.ext.semisupervised.confidence.normalization.NoNormalization
 
normalize(Map<Integer, double[]>) - Method in interface si.ijs.kt.clus.ext.semisupervised.confidence.normalization.Normalization
 
normalize(Map<Integer, double[]>) - Method in class si.ijs.kt.clus.ext.semisupervised.confidence.normalization.Ranking
 
normalize(Map<Integer, double[]>) - Method in class si.ijs.kt.clus.ext.semisupervised.confidence.normalization.Standardization
 
normalizeDataAndWriteToFile() - Method in class si.ijs.kt.clus.Clus
Does not necessarily do the same as returnNormalizedData.
normalizedCopy() - Method in class si.ijs.kt.clus.ext.structuredTypes.SetStatistic
Used for combining weighted predictions.
normalizedCopy() - Method in class si.ijs.kt.clus.ext.structuredTypes.TupleStatistic
Used for combining weighted predictions.
normalizedCopy() - Method in class si.ijs.kt.clus.ext.timeseries.TimeSeriesStat
Used for combining weighted predictions.
normalizedCopy() - Method in class si.ijs.kt.clus.statistic.ClassificationStat
Used for combining weighted predictions.
normalizedCopy() - Method in class si.ijs.kt.clus.statistic.ClusStatistic
 
normalizedCopy() - Method in class si.ijs.kt.clus.statistic.GISStat
Deprecated.
Used for combining weighted predictions.
normalizedCopy() - Method in class si.ijs.kt.clus.statistic.RegressionStat
Used for combining weighted predictions.
normalizedCopy() - Method in class si.ijs.kt.clus.statistic.RegressionStatBinaryNomiss
Used for combining weighted predictions.
normPath(String) - Static method in class si.ijs.kt.clus.util.jeans.util.FileUtil
 
NoStopSearch - Class in si.ijs.kt.clus.addon.sit.searchAlgorithm
 
NoStopSearch() - Constructor for class si.ijs.kt.clus.addon.sit.searchAlgorithm.NoStopSearch
 
NoWeight - Enum constant in enum class si.ijs.kt.clus.main.settings.section.SettingsHMLC.HierarchyWeight
 
NoWeighting - Class in si.ijs.kt.clus.algo.kNN.distance.attributeWeighting
Doesn't weights any attributes.
NoWeighting() - Constructor for class si.ijs.kt.clus.algo.kNN.distance.attributeWeighting.NoWeighting
 
NPairs - Enum constant in enum class si.ijs.kt.clus.main.settings.section.SettingsTimeSeries.TimeSeriesPrototypeComplexity
 
nullInsteadOfClone(Class<?>...) - Method in class si.ijs.kt.clus.util.cloner.Cloner
instead of cloning these classes will set the field to null
NUM_NOM_TAR_NTAR_WEIGHTS - Static variable in class si.ijs.kt.clus.main.settings.section.SettingsAttribute
Section: Attribute - Target weights *
NUMBER - Static variable in class si.ijs.kt.clus.util.jeans.util.MSStringTokenizer
 
numberChildren() - Method in class si.ijs.kt.clus.ext.hierarchical.ClassTerm
 
numberClusters() - Method in class si.ijs.kt.clus.ext.ilevelc.COPKMeans
 
numberCompleteTree() - Method in class si.ijs.kt.clus.algo.tdidt.ClusNode
 
numberCompleteTree(IntObject) - Method in class si.ijs.kt.clus.algo.tdidt.ClusNode
 
numberComponents() - Method in class si.ijs.kt.clus.util.jeans.util.DisjointSetForest
 
numberHierarchy() - Method in class si.ijs.kt.clus.ext.hierarchical.ClassHierarchy
 
numberOfTotalPossibleValues - Variable in class si.ijs.kt.clus.error.sets.HammingLossError
 
numberRules() - Method in class si.ijs.kt.clus.algo.rules.ClusRuleSet
 
numberTree() - Method in class si.ijs.kt.clus.algo.tdidt.ClusNode
 
numberTree(IntObject) - Method in class si.ijs.kt.clus.algo.tdidt.ClusNode
 
Numeric - Enum constant in enum class si.ijs.kt.clus.data.type.ClusAttrType.AttributeType
 
Numeric - Enum constant in enum class si.ijs.kt.clus.main.settings.section.SettingsData.NormalizeDataValues
 
NUMERIC_WEIGHT - Static variable in class si.ijs.kt.clus.main.settings.section.SettingsAttribute
 
NumericAttrBase - Class in si.ijs.kt.clus.data.cols.attribute
 
NumericAttrBase(NumericAttrType) - Constructor for class si.ijs.kt.clus.data.cols.attribute.NumericAttrBase
 
NumericAttribute - Class in si.ijs.kt.clus.data.cols.attribute
 
NumericAttribute(NumericAttrType) - Constructor for class si.ijs.kt.clus.data.cols.attribute.NumericAttribute
 
NumericAttrType - Class in si.ijs.kt.clus.data.type.primitive
Attribute of numeric (continuous) value.
NumericAttrType(String) - Constructor for class si.ijs.kt.clus.data.type.primitive.NumericAttrType
 
NumericAttrType.MySerializable - Class in si.ijs.kt.clus.data.type.primitive
 
NumericBasicDistance - Class in si.ijs.kt.clus.algo.kNN.distance.valentin
This class represents the distance between 2 values of a certain Numerical Attribute type.
NumericBasicDistance(Settings) - Constructor for class si.ijs.kt.clus.algo.kNN.distance.valentin.NumericBasicDistance
 
numericPredict(double) - Method in class si.ijs.kt.clus.model.test.InverseNumericTest
 
numericPredict(double) - Method in class si.ijs.kt.clus.model.test.NodeTest
 
numericPredict(double) - Method in class si.ijs.kt.clus.model.test.NumericTest
 
numericPredictWeighted(double) - Method in class si.ijs.kt.clus.model.test.ClusRuleConstraintInduceTest
 
numericPredictWeighted(double) - Method in class si.ijs.kt.clus.model.test.InverseNumericTest
 
numericPredictWeighted(double) - Method in class si.ijs.kt.clus.model.test.NodeTest
 
numericPredictWeighted(double) - Method in class si.ijs.kt.clus.model.test.NumericTest
 
NumericStatistic - Class in si.ijs.kt.clus.algo.kNN.distance.valentin
This class stores some useful statistics for a Numeric Attribute of certain data.
NumericStatistic() - Constructor for class si.ijs.kt.clus.algo.kNN.distance.valentin.NumericStatistic
 
NumericTarget - Class in si.ijs.kt.clus.data.cols.attribute
 
NumericTarget(ColTarget, NumericAttrType, int) - Constructor for class si.ijs.kt.clus.data.cols.attribute.NumericTarget
 
NumericTest - Class in si.ijs.kt.clus.model.test
 
NumericTest(ClusAttrType) - Constructor for class si.ijs.kt.clus.model.test.NumericTest
 
NumericTest(ClusAttrType, double, double) - Constructor for class si.ijs.kt.clus.model.test.NumericTest
 
NumNeightbours - Static variable in class si.ijs.kt.clus.main.settings.section.SettingsTree
 

O

Object - Enum constant in enum class si.ijs.kt.clus.data.type.ClusAttrType.ValueType
 
Object - Enum constant in enum class si.ijs.kt.clus.main.settings.section.SettingsOutput.PythonModelType
 
objectiveAccuracyEnabled - Variable in class si.ijs.kt.clus.algo.rules.probabilistic.ClusRuleProbabilisticRuleSetInduceWeights
 
objectiveCardinalityEnabled - Variable in class si.ijs.kt.clus.algo.rules.probabilistic.ClusRuleProbabilisticRuleSetInduceWeights
 
objectiveCorrectCoverEnabled - Variable in class si.ijs.kt.clus.algo.rules.probabilistic.ClusRuleProbabilisticRuleSetInduceWeights
 
objectiveIncorrectCoverEnabled - Variable in class si.ijs.kt.clus.algo.rules.probabilistic.ClusRuleProbabilisticRuleSetInduceWeights
 
objectiveOverlapEnabled - Variable in class si.ijs.kt.clus.algo.rules.probabilistic.ClusRuleProbabilisticRuleSetInduceWeights
 
objectiveSizeEnabled - Variable in class si.ijs.kt.clus.algo.rules.probabilistic.ClusRuleProbabilisticRuleSetInduceWeights
turn on/off objectives
ObjectLoadStream - Class in si.ijs.kt.clus.util.jeans.io
A class implementing an interface to the loading of objects from a file
ObjectLoadStream(InputStream) - Constructor for class si.ijs.kt.clus.util.jeans.io.ObjectLoadStream
Opens a file for loading objects from
ObjectSaveStream - Class in si.ijs.kt.clus.util.jeans.io
A class implementing an interface to the saving of objects to a file
ObjectSaveStream(OutputStream) - Constructor for class si.ijs.kt.clus.util.jeans.io.ObjectSaveStream
Opens a file for saving objects to
ObjenesisInstantiationStrategy - Class in si.ijs.kt.clus.util.cloner
 
ObjenesisInstantiationStrategy() - Constructor for class si.ijs.kt.clus.util.cloner.ObjenesisInstantiationStrategy
 
occurs(char, String) - Static method in class si.ijs.kt.clus.util.jeans.util.StringUtils
 
ONE - Enum constant in enum class si.ijs.kt.clus.main.settings.section.SettingsHMTR.HierarchyAggregationsHMTR
 
ONE_AFTER_DOT - Static variable in class si.ijs.kt.clus.util.format.ClusFormat
 
ONE_NOMINAL - Static variable in class si.ijs.kt.clus.main.settings.section.SettingsTree
 
OneBagResults - Class in si.ijs.kt.clus.ext.ensemble.container
 
OneBagResults(ClusModel, HashMap<SettingsEnsemble.EnsembleRanking, HashMap<String, double[][]>>, ClusRun, long, int) - Constructor for class si.ijs.kt.clus.ext.ensemble.container.OneBagResults
 
OneError - Class in si.ijs.kt.clus.error.mlc
 
OneError - Class in si.ijs.kt.clus.error.mlcForHmlc
 
OneError - Enum constant in enum class si.ijs.kt.clus.main.settings.section.SettingsMLC.MultiLabelMeasures
 
OneError() - Constructor for class si.ijs.kt.clus.error.mlcForHmlc.OneError
 
OneError(ClusErrorList, NominalAttrType[]) - Constructor for class si.ijs.kt.clus.error.mlc.OneError
 
oneFold(int, ClusNode) - Method in class si.ijs.kt.clus.ext.optxval.OptXValNode
 
oneFoldRun(ClusInductionAlgorithmType, int) - Method in class si.ijs.kt.clus.Clus
 
OneMinusD - Enum constant in enum class si.ijs.kt.clus.main.settings.section.SettingsKNN.DistanceWeights
 
OneOverD - Enum constant in enum class si.ijs.kt.clus.main.settings.section.SettingsKNN.DistanceWeights
 
OneTarget - Class in si.ijs.kt.clus.addon.sit.searchAlgorithm
Fake learner which returns the maintarget.
OneTarget() - Constructor for class si.ijs.kt.clus.addon.sit.searchAlgorithm.OneTarget
 
OnlyScaling - Enum constant in enum class si.ijs.kt.clus.main.settings.section.SettingsRules.OptimizationNormalization
Normalize during optimization with 2*std dev.
OOBModelWeighted - Enum constant in enum class si.ijs.kt.clus.main.settings.section.SettingsEnsemble.EnsembleVotingType
 
OOBSelection - Class in si.ijs.kt.clus.selection
 
OOBSelection(BagSelection) - Constructor for class si.ijs.kt.clus.selection.OOBSelection
 
OOBTargetWeighted - Enum constant in enum class si.ijs.kt.clus.main.settings.section.SettingsEnsemble.EnsembleVotingType
 
open() - Method in class si.ijs.kt.clus.data.io.ClusReader
 
operationsCount - Static variable in class si.ijs.kt.clus.algo.kNN.methods.SearchAlgorithm
 
Optimization - Enum constant in enum class si.ijs.kt.clus.ext.ensemble.ClusEnsembleInduce.ParallelTrap
 
OptimizationAlgorithm - Class in si.ijs.kt.clus.util.tools.optimization
Abstract super class for optimization of weights of base learners.
OptimizationAlgorithm(ClusStatManager) - Constructor for class si.ijs.kt.clus.util.tools.optimization.OptimizationAlgorithm
Constructor for classification and regression optimization.
OptimizationParameter(int, int, int, int, ImplicitLinearTerms) - Constructor for class si.ijs.kt.clus.util.tools.optimization.OptimizationProblem.OptimizationParameter
An empty class
OptimizationParameter(OptimizationProblem.RulePred[], double[][][][], OptimizationProblem.TrueValues[], ImplicitLinearTerms) - Constructor for class si.ijs.kt.clus.util.tools.optimization.OptimizationProblem.OptimizationParameter
 
OptimizationProblem - Class in si.ijs.kt.clus.util.tools.optimization
Class representing a optimization problem.
OptimizationProblem(ClusStatManager, OptimizationProblem.OptimizationParameter) - Constructor for class si.ijs.kt.clus.util.tools.optimization.OptimizationProblem
Constructor for problem to be solved with optimization.
OptimizationProblem.OptimizationParameter - Class in si.ijs.kt.clus.util.tools.optimization
Parameters for optimization algorithm.
OptimizationProblem.RulePred - Class in si.ijs.kt.clus.util.tools.optimization
Predictions of rule type base functions.
OptimizationProblem.TrueValues - Class in si.ijs.kt.clus.util.tools.optimization
True values of the instances.
optimize() - Method in class si.ijs.kt.clus.util.tools.optimization.de.DEAlgorithm
 
optimize() - Method in class si.ijs.kt.clus.util.tools.optimization.gd.GDAlgorithm
Optimize the weights for the given data with gradient descent algorithm.
optimize() - Method in class si.ijs.kt.clus.util.tools.optimization.OptimizationAlgorithm
Start the actual optimization.
optimize2() - Method in class si.ijs.kt.clus.ext.optxval.OptXValGroup
 
optimize2(int[]) - Method in class si.ijs.kt.clus.data.rows.RowData
 
Optimized - Enum constant in enum class si.ijs.kt.clus.main.settings.section.SettingsRules.RulePredictionMethod
Differential evolution optimization of rule weights
optimizeLinearPreCalc(RowData) - Method in class si.ijs.kt.clus.statistic.SumPairwiseDistancesStat
 
optimizeLinearPreCalc(RowData, int) - Method in class si.ijs.kt.clus.statistic.SumPairwiseDistancesStat
 
optimizeLogPreCalc(RowData) - Method in class si.ijs.kt.clus.statistic.SumPairwiseDistancesStat
 
optimizePairwiseLinearPreCalc(RowData) - Method in class si.ijs.kt.clus.statistic.SumPairwiseDistancesStat
 
optimizePreCalc(RowData) - Method in class si.ijs.kt.clus.statistic.ClusStatistic
 
optimizePreCalc(RowData) - Method in class si.ijs.kt.clus.statistic.SumPairwiseDistancesStat
 
optimizePreCalcExact(RowData) - Method in class si.ijs.kt.clus.statistic.SumPairwiseDistancesStat
 
optimizeRuleSet(ClusRuleSet, RowData) - Method in class si.ijs.kt.clus.algo.rules.ClusRuleConstraintInduce
 
optimizeRuleSet(ClusRuleSet, RowData) - Method in class si.ijs.kt.clus.algo.rules.ClusRuleInduce
Optimize the weights of rules.
OPTION_ARGS - Static variable in class si.ijs.kt.clus.addon.sit.Sit
CMDLineArgsProvider implementation
OPTION_ARGS - Static variable in class si.ijs.kt.clus.Clus
 
OPTION_ARITIES - Static variable in class si.ijs.kt.clus.addon.sit.Sit
 
OPTION_ARITIES - Static variable in class si.ijs.kt.clus.Clus
 
OptionTree - Enum constant in enum class si.ijs.kt.clus.main.settings.section.SettingsRules.InitialRuleGeneratingMethod
 
OptSmoothLocalSearch - Class in si.ijs.kt.clus.util.tools.optimization.sls
 
OptSmoothLocalSearch(Integer, Random, ClusStatManager, ClusRun, ClusRuleProbabilisticRuleSetInduce) - Constructor for class si.ijs.kt.clus.util.tools.optimization.sls.OptSmoothLocalSearch
 
optXVal(RowData) - Method in class si.ijs.kt.clus.ext.optxval.OptXValInduce
 
OptXVal - Class in si.ijs.kt.clus.ext.optxval
Deprecated.
OptXVal(Clus) - Constructor for class si.ijs.kt.clus.ext.optxval.OptXVal
Deprecated.
 
OptXValBinTree - Class in si.ijs.kt.clus.ext.optxval
 
OptXValBinTree() - Constructor for class si.ijs.kt.clus.ext.optxval.OptXValBinTree
 
OptXValGroup - Class in si.ijs.kt.clus.ext.optxval
 
OptXValGroup(RowData, int) - Constructor for class si.ijs.kt.clus.ext.optxval.OptXValGroup
 
OptXValGroup(OptXValGroup, int) - Constructor for class si.ijs.kt.clus.ext.optxval.OptXValGroup
 
OptXValIndNO - Class in si.ijs.kt.clus.ext.optxval
 
OptXValIndNO(ClusSchema, Settings) - Constructor for class si.ijs.kt.clus.ext.optxval.OptXValIndNO
 
OptXValIndOV - Class in si.ijs.kt.clus.ext.optxval
Deprecated.
OptXValIndOV(ClusSchema, Settings) - Constructor for class si.ijs.kt.clus.ext.optxval.OptXValIndOV
Deprecated.
 
OptXValInduce - Class in si.ijs.kt.clus.ext.optxval
 
OptXValInduce(ClusSchema, Settings) - Constructor for class si.ijs.kt.clus.ext.optxval.OptXValInduce
 
OptXValNode - Class in si.ijs.kt.clus.ext.optxval
 
OptXValNode() - Constructor for class si.ijs.kt.clus.ext.optxval.OptXValNode
 
OptXValSplit - Class in si.ijs.kt.clus.ext.optxval
 
OptXValSplit() - Constructor for class si.ijs.kt.clus.ext.optxval.OptXValSplit
 
OR - Enum constant in enum class si.ijs.kt.clus.main.settings.section.SettingsHMTR.HierarchyAggregationsHMTR
 
Oracle - Enum constant in enum class si.ijs.kt.clus.main.settings.section.SettingsKNN.SearchMethod
 
Oracle - Enum constant in enum class si.ijs.kt.clus.main.settings.section.SettingsSSL.SSLConfidenceMeasure
Oracle - real score, just for testing purposes, actual error on unlabeled examples is calculated to establish reliability scores
OracleBruteForce - Class in si.ijs.kt.clus.algo.kNN.methods.bfMethod
 
OracleBruteForce(ClusRun, SearchDistance) - Constructor for class si.ijs.kt.clus.algo.kNN.methods.bfMethod.OracleBruteForce
 
OracleScore - Class in si.ijs.kt.clus.ext.semisupervised.confidence
Provides reliability scores on the basis of 'actual error', which is not attainable in practice, i.e., if true unlabeled data are used.
OracleScore(ClusStatManager, SettingsSSL.SSLNormalization, SettingsSSL.SSLAggregation) - Constructor for class si.ijs.kt.clus.ext.semisupervised.confidence.OracleScore
 
Original - Enum constant in enum class si.ijs.kt.clus.main.settings.section.SettingsOutput.ShowModels
 
ORIGINAL - Static variable in interface si.ijs.kt.clus.model.ClusModel
The type of model returned.
other - Variable in class si.ijs.kt.clus.data.rows.RowDataSortHelper
 
OTHER - Enum constant in enum class si.ijs.kt.clus.main.ClusStatManager.TargetType
 
Others - Enum constant in enum class si.ijs.kt.clus.main.settings.section.SettingsOutput.ShowModels
 
ouputCurve(int, ArrayList, PrintWriter) - Method in class si.ijs.kt.clus.error.hmlc.HierErrorMeasures
 
OUT_WRITER - Static variable in class si.ijs.kt.clus.util.format.ClusFormat
 
out2model(String) - Method in class si.ijs.kt.clus.Clus
 
output() - Method in class si.ijs.kt.clus.algo.kNN.methods.kdTree.KDNode
 
outputBetweenForest(ClusRun, Clus, String) - Method in class si.ijs.kt.clus.ext.ensemble.ClusEnsembleInduce
 
OutputLog(int, PrintWriter) - Method in class si.ijs.kt.clus.util.tools.optimization.gd.GDAlgorithm
Print the current weights output file.
OutputLog(DEIndividual, int, PrintWriter) - Method in class si.ijs.kt.clus.util.tools.optimization.de.DEAlgorithm
Print the gene to output file.
OutputPop() - Method in class si.ijs.kt.clus.util.tools.optimization.de.DEAlgorithm
 
outputPRCurve(int, ROCAndPRCurve) - Method in class si.ijs.kt.clus.error.hmlc.HierErrorMeasures
 
outputROCCurve(int, ROCAndPRCurve) - Method in class si.ijs.kt.clus.error.hmlc.HierErrorMeasures
 
overlap(ClusRule) - Method in class si.ijs.kt.clus.algo.rules.ClusRule
 
OverSample - Class in si.ijs.kt.clus.selection
 
OverSample(int, double) - Constructor for class si.ijs.kt.clus.selection.OverSample
 

P

paintComponent(Graphics) - Method in class si.ijs.kt.clus.addon.ILevelC.ilevelc.ILevelCGUI.ILevelCComponent
 
Pair<T1,T2> - Class in si.ijs.kt.clus.util.tuple
Implements 2-Tuple.
Pair(T1, T2) - Constructor for class si.ijs.kt.clus.util.tuple.Pair
 
Parallel - Class in si.ijs.kt.clus.algo.rules.probabilistic
 
Parallel() - Constructor for class si.ijs.kt.clus.algo.rules.probabilistic.Parallel
 
Parallel.Operation<T> - Interface in si.ijs.kt.clus.algo.rules.probabilistic
 
parent - Variable in class si.ijs.kt.clus.util.jeans.tree.SimpleNode
 
parent - Variable in class si.ijs.kt.clus.util.jeans.tree.VisitableNode
 
ParentNode - Enum constant in enum class si.ijs.kt.clus.main.settings.section.SettingsTree.MissingTargetAttributeHandlingType
variance and mean (i.e., prediction) will be estimated on the basis of the node's parent
partitionData() - Method in class si.ijs.kt.clus.Clus
 
partitionData(ClusData, ClusSelection, boolean, boolean, ClusSummary, int) - Method in class si.ijs.kt.clus.Clus
 
partitionData(ClusRun) - Method in class si.ijs.kt.clus.ext.semisupervised.ClusSemiSupervisedInduce
 
partitionData(ClusRun) - Method in class si.ijs.kt.clus.ext.semisupervised.ClusSemiSupervisedPCTs
 
partitionData(ClusSelection, int) - Method in class si.ijs.kt.clus.Clus
 
partitionDataBasic(ClusData, ClusSelection, ClusData, ClusSummary, int) - Method in class si.ijs.kt.clus.Clus
 
partitionDataBasic(ClusData, ClusSelection, ClusSummary, int) - Method in class si.ijs.kt.clus.algo.rules.tune.FIREROSTune
 
partitionDataBasic(ClusData, ClusSelection, ClusSummary, int) - Method in class si.ijs.kt.clus.algo.tdidt.tune.CDTTuneFTest
 
partitionDataBasic(ClusData, ClusSelection, ClusSummary, int) - Method in class si.ijs.kt.clus.Clus
 
partitionDataBasic(RowData) - Method in class si.ijs.kt.clus.Clus
 
PATH_ABUNDANCE - Static variable in class si.ijs.kt.clus.ext.hierarchical.ClassesValue
 
PCT - Enum constant in enum class si.ijs.kt.clus.main.settings.section.SettingsSSL.SSLMethod
 
PDist - Enum constant in enum class si.ijs.kt.clus.main.settings.section.SettingsPhylogeny.PhylogenyDistanceMeasure
 
Pearson - Enum constant in enum class si.ijs.kt.clus.main.settings.section.SettingsTree.SpatialMeasure
 
PearsonCorrelation - Class in si.ijs.kt.clus.error
 
PearsonCorrelation(ClusErrorList, NumericAttrType[]) - Constructor for class si.ijs.kt.clus.error.PearsonCorrelation
 
PearsonCorrelation(ClusErrorList, NumericAttrType[], String) - Constructor for class si.ijs.kt.clus.error.PearsonCorrelation
 
PearsonDistance - Enum constant in enum class si.ijs.kt.clus.main.settings.section.SettingsTree.SpatialMeasure
 
perform(T) - Method in interface si.ijs.kt.clus.algo.rules.probabilistic.Parallel.Operation
 
performSignificanceTest() - Method in class si.ijs.kt.clus.statistic.WHTDStatistic
 
Pert - Enum constant in enum class si.ijs.kt.clus.main.settings.section.SettingsEnsemble.EnsembleMethod
 
PHYLO - Enum constant in enum class si.ijs.kt.clus.main.ClusStatManager.Mode
 
PICO - Static variable in class si.ijs.kt.clus.util.ClusUtil
 
pooledAUPRC - Enum constant in enum class si.ijs.kt.clus.error.mlcForHmlc.MLROCAndPRCurve.CurveType
 
pooledAUPRC - Static variable in class si.ijs.kt.clus.error.mlc.MLROCAndPRCurve
 
PooledAUPRC - Enum constant in enum class si.ijs.kt.clus.main.settings.section.SettingsHMLC.HierarchyDistance
 
PooledAUPRC - Enum constant in enum class si.ijs.kt.clus.main.settings.section.SettingsHMLC.HierarchyMeasures
 
PooledAUPRC - Enum constant in enum class si.ijs.kt.clus.main.settings.section.SettingsMLC.MultiLabelMeasures
 
pop() - Method in class si.ijs.kt.clus.util.jeans.util.IntegerStack
 
pos - Variable in class si.ijs.kt.clus.util.jeans.util.IntegerStack
 
pos - Variable in class si.ijs.kt.clus.util.jeans.util.MStringTokenizer
 
POS - Static variable in class si.ijs.kt.clus.ext.ilevelc.ILevelCHeurStat
 
position - Variable in class si.ijs.kt.clus.util.jeans.util.MStreamTokenizer
 
POSITIVE_CLASS - Static variable in class si.ijs.kt.clus.data.type.primitive.NominalAttrType
 
POSITIVE_CLASS_INDEX - Static variable in class si.ijs.kt.clus.data.type.primitive.NominalAttrType
 
postProc() - Method in class si.ijs.kt.clus.algo.rules.ClusRule
Post process the rule.
postProc() - Method in class si.ijs.kt.clus.algo.rules.ClusRuleSet
Post process the rule set rule by rule.
postProcess(ClusRuleSet) - Method in class si.ijs.kt.clus.util.tools.optimization.gd.GDAlgorithm
 
postProcess(ClusRuleSet) - Method in class si.ijs.kt.clus.util.tools.optimization.OptimizationAlgorithm
 
postProcess(ClusRun) - Method in class si.ijs.kt.clus.algo.ClusInductionAlgorithmType
 
postProcess(ClusRun) - Method in class si.ijs.kt.clus.algo.kNN.KnnClassifier
 
postProcess(ClusRun) - Method in class si.ijs.kt.clus.algo.rules.ClusRuleClassifier
 
postProcess(ClusRun) - Method in class si.ijs.kt.clus.algo.tdidt.ClusDecisionTree
Post processing decision tree.
postProcess(ClusRun) - Method in class si.ijs.kt.clus.ext.beamsearch.ClusBeamSearch
 
postProcess(ClusRun) - Method in class si.ijs.kt.clus.ext.ensemble.ClusEnsembleClassifier
 
postProcess(ClusRun) - Method in class si.ijs.kt.clus.ext.exhaustivesearch.ClusExhaustiveSearch
 
postProcess(ClusRun) - Method in class si.ijs.kt.clus.ext.featureRanking.relief.Relief
 
postProcess(ClusRun) - Method in class si.ijs.kt.clus.ext.optiontree.ClusOptionTree
 
postProcess(ClusRun) - Method in class si.ijs.kt.clus.ext.semisupervised.ClusSemiSupervisedClassifier
 
postProcessForest(ClusRun) - Method in class si.ijs.kt.clus.ext.ensemble.ClusEnsembleInduce
 
postProcessForestForOOBEstimate(ClusRun, OOBSelection, RowData, Clus, String) - Method in class si.ijs.kt.clus.ext.ensemble.ClusOOBErrorEstimate
 
postPruneBeamModels(ClusRun, ArrayList) - Method in class si.ijs.kt.clus.ext.beamsearch.ClusBeamInduce
Dragi, JSI Post Pruning of the models in the beam
Precision - Class in si.ijs.kt.clus.error.sets
 
Precision - Enum constant in enum class si.ijs.kt.clus.main.settings.section.SettingsSSL.SSLConfidenceMeasure
"Precision" - used for HMC, on the basis of OOB examples, classification threshold is found such that precision of precision is larger that the specified threshold
Precision(ClusErrorList, SetAttrType[], ClusAttributeWeights, boolean, ClusDistance) - Constructor for class si.ijs.kt.clus.error.sets.Precision
 
Precision(ClusErrorList, SetAttrType[], ClusAttributeWeights, ClusDistance) - Constructor for class si.ijs.kt.clus.error.sets.Precision
 
Precision(ClusErrorList, SetAttrType[], ClusDistance) - Constructor for class si.ijs.kt.clus.error.sets.Precision
 
predict(int, DataTuple, int, int) - Method in class si.ijs.kt.clus.util.tools.optimization.ImplicitLinearTerms
If linear terms are not added excplicitly to the rule set (to save memory), this function returns the prediction.
predict(ClusAttribute, int) - Method in class si.ijs.kt.clus.model.test.SoftTest
 
predict(ClusModel, DataTuple) - Static method in class si.ijs.kt.clus.model.ClusModelPredictor
 
predict(ClusModel, RowData) - Static method in class si.ijs.kt.clus.model.ClusModelPredictor
 
predictClass(double[][]) - Method in class si.ijs.kt.clus.util.tools.optimization.OptimizationProblem
Classification prediction.
PredictionAnalyzer - Class in si.ijs.kt.clus.addon.network
 
PredictionAnalyzer() - Constructor for class si.ijs.kt.clus.addon.network.PredictionAnalyzer
 
PredictionConfidence - Class in si.ijs.kt.clus.ext.semisupervised.confidence
 
PredictionConfidence(ClusStatManager, SettingsSSL.SSLNormalization, SettingsSSL.SSLAggregation) - Constructor for class si.ijs.kt.clus.ext.semisupervised.confidence.PredictionConfidence
 
PredictionWriter - Class in si.ijs.kt.clus.model.processor
 
PredictionWriter(String, Settings, ClusStatistic) - Constructor for class si.ijs.kt.clus.model.processor.PredictionWriter
 
predictTuple(DataTuple) - Method in class si.ijs.kt.clus.statistic.ClassificationStat
 
predictTuple(DataTuple) - Method in class si.ijs.kt.clus.statistic.ClusStatistic
 
predictTuple(DataTuple) - Method in class si.ijs.kt.clus.statistic.RegressionStatBase
 
predictTuple(DataTuple) - Method in class si.ijs.kt.clus.statistic.WHTDStatistic
 
predictTupleOneComponent(DataTuple, int, double) - Method in class si.ijs.kt.clus.statistic.ClusStatistic
 
predictTupleOneComponent(DataTuple, int, double) - Method in class si.ijs.kt.clus.statistic.RegressionStatBase
 
predictTupleOneComponent(DataTuple, int, int) - Method in class si.ijs.kt.clus.statistic.ClassificationStat
 
predictTupleOneComponent(DataTuple, int, int) - Method in class si.ijs.kt.clus.statistic.ClusStatistic
 
predictWeighted(DataTuple) - Method in class si.ijs.kt.clus.addon.hmc.HMCAverageSingleClass.HMCAverageTreeModel
 
predictWeighted(DataTuple) - Method in class si.ijs.kt.clus.algo.kNN.KnnModel
 
predictWeighted(DataTuple) - Method in class si.ijs.kt.clus.algo.rules.ClusRule
Returns the prediction by this rule for the tuple.
predictWeighted(DataTuple) - Method in class si.ijs.kt.clus.algo.rules.ClusRuleLinearTerm
Returns the prediction by this linear term for the tuple.
predictWeighted(DataTuple) - Method in class si.ijs.kt.clus.algo.rules.ClusRuleSet
Returns the statistic (prediction) for a given tuple.
predictWeighted(DataTuple) - Method in class si.ijs.kt.clus.algo.tdidt.ClusNode
Code for making predictions
predictWeighted(DataTuple) - Method in class si.ijs.kt.clus.ext.ensemble.ClusBoostingForest
 
predictWeighted(DataTuple) - Method in class si.ijs.kt.clus.ext.ensemble.ClusForest
 
predictWeighted(DataTuple) - Method in class si.ijs.kt.clus.ext.featureRanking.relief.ReliefModel
 
predictWeighted(DataTuple) - Method in class si.ijs.kt.clus.ext.ilevelc.COPKMeansModel
 
predictWeighted(DataTuple) - Method in class si.ijs.kt.clus.ext.ilevelc.SimpleClusterModel
 
predictWeighted(DataTuple) - Method in class si.ijs.kt.clus.ext.optiontree.ClusOptionNode
 
predictWeighted(DataTuple) - Method in class si.ijs.kt.clus.ext.optiontree.ClusSplitNode
 
predictWeighted(DataTuple) - Method in interface si.ijs.kt.clus.model.ClusModel
 
predictWeighted(DataTuple) - Method in class si.ijs.kt.clus.model.test.ClusRuleConstraintInduceTest
 
predictWeighted(DataTuple) - Method in class si.ijs.kt.clus.model.test.FakeTest
 
predictWeighted(DataTuple) - Method in class si.ijs.kt.clus.model.test.InverseNumericTest
 
predictWeighted(DataTuple) - Method in class si.ijs.kt.clus.model.test.NodeTest
Prediction methods
predictWeighted(DataTuple) - Method in class si.ijs.kt.clus.model.test.NominalTest
 
predictWeighted(DataTuple) - Method in class si.ijs.kt.clus.model.test.NumericTest
 
predictWeighted(DataTuple) - Method in class si.ijs.kt.clus.model.test.SoftTest
 
predictWeighted(DataTuple) - Method in class si.ijs.kt.clus.model.test.SubsetTest
 
predictWeighted(DataTuple, ArrayList<Integer>) - Method in class si.ijs.kt.clus.algo.kNN.KnnModel
 
predictWeightedAndGetLeafTuples(DataTuple, List<Integer>) - Method in class si.ijs.kt.clus.algo.tdidt.ClusNode
Make prediction and store indices of tuples which ended in the same leaf as the given tuple in the leafTuples variable.
predictWeightedLeaf(DataTuple) - Method in class si.ijs.kt.clus.algo.tdidt.ClusNode
Returns the majority class for this node.(not so good name)
predictWeightedOOB(DataTuple) - Method in class si.ijs.kt.clus.ext.ensemble.ClusForest
 
predictWeightedOOBAndGetProximities(DataTuple) - Method in class si.ijs.kt.clus.ext.ensemble.ClusForest
The same as predict weighted OOB, but also calculates random forest proximities
predictWeightedOOBClassification(DataTuple) - Method in class si.ijs.kt.clus.ext.ensemble.ClusForest
 
predictWeightedOOBRegressionHMC(DataTuple) - Method in class si.ijs.kt.clus.ext.ensemble.ClusForest
 
predictWeightedOpt(DataTuple) - Method in class si.ijs.kt.clus.ext.ensemble.ClusForest
 
predictWeightedRegression(RegressionStat, DataTuple) - Method in class si.ijs.kt.clus.ext.ensemble.ClusBoostingForest
 
predictWeightedSLS(DataTuple) - Method in class si.ijs.kt.clus.algo.rules.ClusRuleSet
 
predictWeightedStandard(DataTuple) - Method in class si.ijs.kt.clus.ext.ensemble.ClusForest
 
predictWeightedStandardAndGetProximities(DataTuple) - Method in class si.ijs.kt.clus.ext.ensemble.ClusForest
The same as predict weighted standard, but also calculates random forest proximities
predictWeightedStandardSubspaceAveraging(DataTuple) - Method in class si.ijs.kt.clus.ext.ensemble.ClusForest
Used for ROS ensembles
predictWeightedStandardSubspaceAveragingOpt(DataTuple) - Method in class si.ijs.kt.clus.ext.ensemble.ClusForest
Used for OPTIMIZED ROS ensembles
predictWithRule(int, int, int) - Method in class si.ijs.kt.clus.util.tools.optimization.gd.GDProblem
Returns the real prediction when this rule is used.
prepare() - Method in class si.ijs.kt.clus.data.cols.attribute.ClusAttribute
 
prepare() - Method in class si.ijs.kt.clus.data.cols.attribute.NumericAttribute
 
preparePredictionsForNormalization() - Method in class si.ijs.kt.clus.util.tools.optimization.OptimizationProblem
Prepare predictions for normalization, the predictions might have to be changed
preproc(int, DataTuple) - Method in class si.ijs.kt.clus.data.rows.DataPreprocs
 
preproc(int, DataTuple) - Method in interface si.ijs.kt.clus.data.rows.TuplePreproc
 
preproc(int, DataTuple) - Method in class si.ijs.kt.clus.ext.hierarchical.ClassHierarchyPreproc
 
preprocess() - Method in class si.ijs.kt.clus.Clus
 
preprocess(int) - Method in class si.ijs.kt.clus.model.test.NodeTest
Special things
preprocess(int) - Method in class si.ijs.kt.clus.model.test.NominalTest
 
preprocess(int, DataPreprocs) - Method in class si.ijs.kt.clus.data.ClusData
 
preprocess(int, DataPreprocs) - Method in class si.ijs.kt.clus.data.rows.RowData
 
preprocess(ClusData) - Method in class si.ijs.kt.clus.Clus
 
preprocNodes(OptXValNode, OptXValInduce) - Method in class si.ijs.kt.clus.ext.optxval.OptXValGroup
 
preprocSingle(DataTuple) - Method in class si.ijs.kt.clus.data.rows.DataPreprocs
 
preprocSingle(DataTuple) - Method in interface si.ijs.kt.clus.data.rows.TuplePreproc
 
preprocSingle(DataTuple) - Method in class si.ijs.kt.clus.ext.hierarchical.ClassHierarchyPreproc
 
preprocSingle(RowData) - Method in class si.ijs.kt.clus.Clus
 
preprocTuple(DataTuple) - Method in class si.ijs.kt.clus.data.rows.TupleIterator
 
prevcr - Variable in class si.ijs.kt.clus.util.jeans.util.MTokenizer
 
previousSumW - Variable in class si.ijs.kt.clus.statistic.ClassificationStat
 
previousSumWR - Variable in class si.ijs.kt.clus.statistic.ClassificationStat
 
previousSumWX - Variable in class si.ijs.kt.clus.statistic.ClassificationStat
 
previousSumWXR - Variable in class si.ijs.kt.clus.statistic.ClassificationStat
 
previousSumWXX - Variable in class si.ijs.kt.clus.statistic.ClassificationStat
 
previousSumWXXR - Variable in class si.ijs.kt.clus.statistic.ClassificationStat
 
previousSumX - Variable in class si.ijs.kt.clus.statistic.ClassificationStat
 
previousSumX2 - Variable in class si.ijs.kt.clus.statistic.ClassificationStat
 
previousSumX2R - Variable in class si.ijs.kt.clus.statistic.ClassificationStat
 
previousSumXR - Variable in class si.ijs.kt.clus.statistic.ClassificationStat
 
print() - Method in class si.ijs.kt.clus.ext.beamsearch.ClusBeam
 
print() - Method in class si.ijs.kt.clus.ext.exhaustivesearch.ClusExhaustive
 
print() - Method in class si.ijs.kt.clus.selection.XValGroup
 
print() - Method in class si.ijs.kt.clus.util.jeans.util.array.StringTable
 
print(int[]) - Static method in class si.ijs.kt.clus.util.jeans.util.array.MyIntArray
 
print(int, PrintWriter, double[], double[]) - Method in class si.ijs.kt.clus.ext.hierarchical.ClassTerm
 
print(PrintWriter) - Method in class si.ijs.kt.clus.ext.hierarchical.ClassHierarchy
 
print(PrintWriter, double[]) - Method in class si.ijs.kt.clus.ext.hierarchical.ClassHierarchy
 
print(PrintWriter, double[], double[]) - Method in class si.ijs.kt.clus.ext.hierarchical.ClassHierarchy
 
print(PrintWriter, int) - Method in class si.ijs.kt.clus.ext.beamsearch.ClusBeam
 
print(PrintWriter, int) - Method in class si.ijs.kt.clus.ext.exhaustivesearch.ClusExhaustive
 
print(PrintWriter, NumberFormat, int) - Method in class si.ijs.kt.clus.util.jeans.math.matrix.MMatrix
 
print(String) - Method in class si.ijs.kt.clus.main.ClusOutput
 
printAlphaValues() - Method in class si.ijs.kt.clus.heuristic.EncodingCost
 
printArray(double[]) - Static method in class si.ijs.kt.clus.ext.semisupervised.Helper
 
printArray(PrintWriter, double[], double[], NumberFormat) - Static method in class si.ijs.kt.clus.util.format.ClusFormat
 
printArray(PrintWriter, double[], NumberFormat) - Static method in class si.ijs.kt.clus.util.format.ClusFormat
 
printArray(ArrayList, StringBuffer) - Method in class si.ijs.kt.clus.ext.timeseries.TimeSeriesSignificantChangeTesterXVAL
 
printArray(DoublesPair[]) - Static method in class si.ijs.kt.clus.ext.semisupervised.Helper
Prints array
printBeamStats(int) - Method in class si.ijs.kt.clus.ext.beamsearch.ClusBeamSearch
 
printBeamStats(int) - Method in class si.ijs.kt.clus.ext.exhaustivesearch.ClusExhaustiveSearch
 
printCandidates() - Method in class si.ijs.kt.clus.ext.optiontree.FindBestTests
 
printDebug() - Method in class si.ijs.kt.clus.selection.XValRandomSelection
 
printDebug() - Method in class si.ijs.kt.clus.statistic.ClusStatistic
 
printDebug() - Method in class si.ijs.kt.clus.statistic.RegressionStat
 
printDepth() - Method in class si.ijs.kt.clus.ext.hierarchicalmtr.ClusHMTRHierarchy
 
printDistribution(PrintWriter) - Method in class si.ijs.kt.clus.statistic.ClassificationStat
 
printDistribution(PrintWriter) - Method in class si.ijs.kt.clus.statistic.ClusStatistic
 
printDistribution(PrintWriter) - Method in class si.ijs.kt.clus.statistic.CombStat
 
printDistribution(PrintWriter) - Method in class si.ijs.kt.clus.statistic.RegressionStatBase
 
printDistribution(PrintWriter) - Method in class si.ijs.kt.clus.statistic.WHTDStatistic
 
printDistributionRec(PrintWriter, ClassTerm) - Method in class si.ijs.kt.clus.statistic.WHTDStatistic
 
printDuration() - Method in class si.ijs.kt.clus.heuristic.EncodingCost
 
printExtraError(ClusModelInfoList, int, PrintWriter) - Static method in class si.ijs.kt.clus.error.common.ClusErrorList
 
printForestToPython(SettingsOutput.PythonModelType) - Method in class si.ijs.kt.clus.ext.ensemble.ClusForest
Prints the trees of the forest into a python file.
printGPL() - Static method in class si.ijs.kt.clus.util.ClusMisc
 
printGradientsToFile(int, PrintWriter) - Method in class si.ijs.kt.clus.util.tools.optimization.gd.GDProblem
Print gradients to output file.
printHeader(boolean) - Static method in class si.ijs.kt.clus.util.ClusMisc
 
printHierarchy() - Method in class si.ijs.kt.clus.ext.hierarchicalmtr.ClusHMTRHierarchy
 
printHierarchyTree() - Method in class si.ijs.kt.clus.ext.hierarchicalmtr.ClusHMTRHierarchy
 
printHierarchyTree(ClusHMTRNode) - Method in class si.ijs.kt.clus.ext.hierarchicalmtr.ClusHMTRHierarchy
 
printIDs(String) - Method in class si.ijs.kt.clus.data.rows.RowData
 
printInfo() - Method in class si.ijs.kt.clus.algo.ClusInductionAlgorithmType
 
printInfo() - Method in class si.ijs.kt.clus.algo.rules.ClusRuleClassifier
 
printInfo() - Method in class si.ijs.kt.clus.algo.rules.tune.FIREROSTune
 
printInfo() - Method in class si.ijs.kt.clus.algo.tdidt.ClusDecisionTree
 
printInfo() - Method in class si.ijs.kt.clus.algo.tdidt.ClusSITDecisionTree
 
printInfo() - Method in class si.ijs.kt.clus.algo.tdidt.tune.CDTTuneFTest
 
printInfo() - Method in class si.ijs.kt.clus.algo.tdidt.tune.CDTuneSizeConstrPruning
 
printInfo() - Method in class si.ijs.kt.clus.data.ClusSchema
 
printInfo() - Method in class si.ijs.kt.clus.ext.ensemble.ClusEnsembleClassifier
 
printInfo() - Method in class si.ijs.kt.clus.ext.optiontree.ClusOptionTree
 
printInfo() - Method in class si.ijs.kt.clus.ext.semisupervised.ClusSemiSupervisedClassifier
 
printInfo(double, double, double, ClusStatistic) - Method in class si.ijs.kt.clus.heuristic.VarianceReductionHeuristicEfficient
 
printInstanceLabels(ClusNode, RowData) - Method in class si.ijs.kt.clus.pruning.EncodingCostPruning
 
printInt(int, int) - Static method in class si.ijs.kt.clus.util.jeans.util.StringUtils
 
println() - Method in class si.ijs.kt.clus.ext.optxval.OptXValGroup
 
println(String) - Method in class si.ijs.kt.clus.model.processor.PredictionWriter
 
printMatrixTeX() - Method in class si.ijs.kt.clus.error.CorrelationMatrixComputer
 
printMessage(String, int, int) - Static method in class si.ijs.kt.clus.ext.featureRanking.relief.ClusReliefFeatureRanking
Prints the message if verbose level in the settings file is at the desired verbose level or higher.
printModel() - Method in class si.ijs.kt.clus.algo.rules.ClusRule
 
printModel(PrintWriter) - Method in class si.ijs.kt.clus.addon.hmc.HMCAverageSingleClass.HMCAverageTreeModel
 
printModel(PrintWriter) - Method in class si.ijs.kt.clus.algo.kNN.KnnModel
 
printModel(PrintWriter) - Method in class si.ijs.kt.clus.algo.rules.ClusRule
 
printModel(PrintWriter) - Method in class si.ijs.kt.clus.algo.rules.ClusRuleSet
 
printModel(PrintWriter) - Method in class si.ijs.kt.clus.algo.tdidt.ClusNode
Printing the tree ?
printModel(PrintWriter) - Method in class si.ijs.kt.clus.ext.ensemble.ClusForest
 
printModel(PrintWriter) - Method in class si.ijs.kt.clus.ext.featureRanking.relief.ReliefModel
 
printModel(PrintWriter) - Method in class si.ijs.kt.clus.ext.optiontree.ClusOptionNode
 
printModel(PrintWriter) - Method in class si.ijs.kt.clus.ext.optiontree.ClusSplitNode
Printing the tree ?
printModel(PrintWriter) - Method in interface si.ijs.kt.clus.model.ClusModel
 
printModel(PrintWriter, StatisticPrintInfo) - Method in class si.ijs.kt.clus.addon.hmc.HMCAverageSingleClass.HMCAverageTreeModel
 
printModel(PrintWriter, StatisticPrintInfo) - Method in class si.ijs.kt.clus.algo.kNN.KnnModel
 
printModel(PrintWriter, StatisticPrintInfo) - Method in class si.ijs.kt.clus.algo.rules.ClusRule
 
printModel(PrintWriter, StatisticPrintInfo) - Method in class si.ijs.kt.clus.algo.rules.ClusRuleLinearTerm
 
printModel(PrintWriter, StatisticPrintInfo) - Method in class si.ijs.kt.clus.algo.rules.ClusRuleSet
 
printModel(PrintWriter, StatisticPrintInfo) - Method in class si.ijs.kt.clus.algo.tdidt.ClusNode
 
printModel(PrintWriter, StatisticPrintInfo) - Method in class si.ijs.kt.clus.ext.ensemble.ClusForest
 
printModel(PrintWriter, StatisticPrintInfo) - Method in class si.ijs.kt.clus.ext.featureRanking.relief.ReliefModel
 
printModel(PrintWriter, StatisticPrintInfo) - Method in class si.ijs.kt.clus.ext.ilevelc.COPKMeansModel
 
printModel(PrintWriter, StatisticPrintInfo) - Method in class si.ijs.kt.clus.ext.ilevelc.SimpleClusterModel
 
printModel(PrintWriter, StatisticPrintInfo) - Method in class si.ijs.kt.clus.ext.optiontree.ClusOptionNode
 
printModel(PrintWriter, StatisticPrintInfo) - Method in class si.ijs.kt.clus.ext.optiontree.ClusSplitNode
 
printModel(PrintWriter, StatisticPrintInfo) - Method in interface si.ijs.kt.clus.model.ClusModel
 
printModelAndExamples(PrintWriter, StatisticPrintInfo, ClusSchema) - Method in class si.ijs.kt.clus.algo.rules.ClusRuleSet
 
printModelAndExamples(PrintWriter, StatisticPrintInfo, RowData) - Method in class si.ijs.kt.clus.addon.hmc.HMCAverageSingleClass.HMCAverageTreeModel
 
printModelAndExamples(PrintWriter, StatisticPrintInfo, RowData) - Method in class si.ijs.kt.clus.algo.kNN.KnnModel
 
printModelAndExamples(PrintWriter, StatisticPrintInfo, RowData) - Method in class si.ijs.kt.clus.algo.rules.ClusRule
 
printModelAndExamples(PrintWriter, StatisticPrintInfo, RowData) - Method in class si.ijs.kt.clus.algo.rules.ClusRuleSet
 
printModelAndExamples(PrintWriter, StatisticPrintInfo, RowData) - Method in class si.ijs.kt.clus.algo.tdidt.ClusNode
 
printModelAndExamples(PrintWriter, StatisticPrintInfo, RowData) - Method in class si.ijs.kt.clus.ext.ensemble.ClusForest
 
printModelAndExamples(PrintWriter, StatisticPrintInfo, RowData) - Method in class si.ijs.kt.clus.ext.featureRanking.relief.ReliefModel
 
printModelAndExamples(PrintWriter, StatisticPrintInfo, RowData) - Method in class si.ijs.kt.clus.ext.optiontree.ClusOptionNode
 
printModelAndExamples(PrintWriter, StatisticPrintInfo, RowData) - Method in class si.ijs.kt.clus.ext.optiontree.ClusSplitNode
 
printModelAndExamples(PrintWriter, StatisticPrintInfo, RowData) - Method in interface si.ijs.kt.clus.model.ClusModel
 
printModelNames() - Method in class si.ijs.kt.clus.model.io.ClusModelCollectionIO
 
printModelTests(PrintWriter) - Method in class si.ijs.kt.clus.algo.rules.ClusRule
 
printModelToPythonScript(PrintWriter, HashMap<String, Integer>) - Method in class si.ijs.kt.clus.addon.hmc.HMCAverageSingleClass.HMCAverageTreeModel
 
printModelToPythonScript(PrintWriter, HashMap<String, Integer>) - Method in class si.ijs.kt.clus.algo.kNN.KnnModel
 
printModelToPythonScript(PrintWriter, HashMap<String, Integer>) - Method in class si.ijs.kt.clus.algo.rules.ClusRule
 
printModelToPythonScript(PrintWriter, HashMap<String, Integer>) - Method in class si.ijs.kt.clus.algo.rules.ClusRuleSet
 
printModelToPythonScript(PrintWriter, HashMap<String, Integer>) - Method in class si.ijs.kt.clus.algo.tdidt.ClusNode
 
printModelToPythonScript(PrintWriter, HashMap<String, Integer>) - Method in class si.ijs.kt.clus.ext.ensemble.ClusForest
 
printModelToPythonScript(PrintWriter, HashMap<String, Integer>) - Method in class si.ijs.kt.clus.ext.featureRanking.relief.ReliefModel
 
printModelToPythonScript(PrintWriter, HashMap<String, Integer>) - Method in class si.ijs.kt.clus.ext.optiontree.ClusOptionNode
 
printModelToPythonScript(PrintWriter, HashMap<String, Integer>) - Method in class si.ijs.kt.clus.ext.optiontree.ClusSplitNode
 
printModelToPythonScript(PrintWriter, HashMap<String, Integer>) - Method in interface si.ijs.kt.clus.model.ClusModel
 
printModelToPythonScript(PrintWriter, HashMap<String, Integer>, String) - Method in class si.ijs.kt.clus.addon.hmc.HMCAverageSingleClass.HMCAverageTreeModel
 
printModelToPythonScript(PrintWriter, HashMap<String, Integer>, String) - Method in class si.ijs.kt.clus.algo.kNN.KnnModel
 
printModelToPythonScript(PrintWriter, HashMap<String, Integer>, String) - Method in class si.ijs.kt.clus.algo.rules.ClusRule
 
printModelToPythonScript(PrintWriter, HashMap<String, Integer>, String) - Method in class si.ijs.kt.clus.algo.rules.ClusRuleSet
 
printModelToPythonScript(PrintWriter, HashMap<String, Integer>, String) - Method in class si.ijs.kt.clus.algo.tdidt.ClusNode
 
printModelToPythonScript(PrintWriter, HashMap<String, Integer>, String) - Method in class si.ijs.kt.clus.ext.ensemble.ClusForest
 
printModelToPythonScript(PrintWriter, HashMap<String, Integer>, String) - Method in class si.ijs.kt.clus.ext.featureRanking.relief.ReliefModel
 
printModelToPythonScript(PrintWriter, HashMap<String, Integer>, String) - Method in class si.ijs.kt.clus.ext.optiontree.ClusOptionNode
 
printModelToPythonScript(PrintWriter, HashMap<String, Integer>, String) - Method in class si.ijs.kt.clus.ext.optiontree.ClusSplitNode
 
printModelToPythonScript(PrintWriter, HashMap<String, Integer>, String) - Method in interface si.ijs.kt.clus.model.ClusModel
 
printModelToQuery(PrintWriter, ClusRun, int, int, boolean) - Method in class si.ijs.kt.clus.addon.hmc.HMCAverageSingleClass.HMCAverageTreeModel
 
printModelToQuery(PrintWriter, ClusRun, int, int, boolean) - Method in class si.ijs.kt.clus.algo.kNN.KnnModel
 
printModelToQuery(PrintWriter, ClusRun, int, int, boolean) - Method in class si.ijs.kt.clus.algo.rules.ClusRule
 
printModelToQuery(PrintWriter, ClusRun, int, int, boolean) - Method in class si.ijs.kt.clus.algo.rules.ClusRuleSet
 
printModelToQuery(PrintWriter, ClusRun, int, int, boolean) - Method in class si.ijs.kt.clus.algo.tdidt.ClusNode
 
printModelToQuery(PrintWriter, ClusRun, int, int, boolean) - Method in class si.ijs.kt.clus.ext.ensemble.ClusForest
 
printModelToQuery(PrintWriter, ClusRun, int, int, boolean) - Method in class si.ijs.kt.clus.ext.featureRanking.relief.ReliefModel
 
printModelToQuery(PrintWriter, ClusRun, int, int, boolean) - Method in class si.ijs.kt.clus.ext.optiontree.ClusOptionNode
 
printModelToQuery(PrintWriter, ClusRun, int, int, boolean) - Method in class si.ijs.kt.clus.ext.optiontree.ClusSplitNode
 
printModelToQuery(PrintWriter, ClusRun, int, int, boolean) - Method in interface si.ijs.kt.clus.model.ClusModel
 
printMultiLabelThresholds(PrintWriter, int) - Method in class si.ijs.kt.clus.algo.tdidt.ClusNode
 
printNodeAndChildren() - Method in class si.ijs.kt.clus.ext.hierarchicalmtr.ClusHMTRNode
 
printNonZeroAccuracies(ClusNumberFormat, PrintWriter, ClassHierarchy) - Method in class si.ijs.kt.clus.error.hmlc.HierClassWiseAccuracy
 
printNonZeroAccuraciesRec(ClusNumberFormat, PrintWriter, ClassTerm, boolean[]) - Method in class si.ijs.kt.clus.error.hmlc.HierClassWiseAccuracy
 
printOneTree(PrintWriter, ClusNode, int, SettingsOutput.PythonModelType) - Method in class si.ijs.kt.clus.ext.ensemble.ClusForest
 
printPaths(PrintWriter, String, String, RowData, OOBSelection, boolean) - Method in class si.ijs.kt.clus.algo.tdidt.ClusNode
 
printPredictionsToFile(PrintWriter) - Method in class si.ijs.kt.clus.util.tools.optimization.OptimizationProblem
Print predictions to output file.
printPrototype(int, RowData) - Method in class si.ijs.kt.clus.algo.kNN.KNNStatistics
Deprecated.
Prints the values of the idx'th prototype.
printResults(ClusNumberFormat, PrintWriter, ClassHierarchy) - Method in class si.ijs.kt.clus.error.hmlc.HierErrorMeasures
 
printResultsRec(ClusNumberFormat, PrintWriter, ClassTerm, boolean[]) - Method in class si.ijs.kt.clus.error.hmlc.HierErrorMeasures
 
printStr(String, int) - Static method in class si.ijs.kt.clus.util.jeans.util.StringUtils
 
printString(PrintWriter, int, String) - Method in class si.ijs.kt.clus.error.ContingencyTable
 
printStrMax(String, int) - Static method in class si.ijs.kt.clus.util.jeans.util.StringUtils
 
printTabs(PrintWriter, int) - Static method in class si.ijs.kt.clus.util.jeans.util.StringUtils
 
printTestNode(String, int) - Method in class si.ijs.kt.clus.algo.tdidt.ClusNode
 
printTestNode(String, int) - Method in class si.ijs.kt.clus.ext.optiontree.ClusOptionNode
 
printTree() - Method in class si.ijs.kt.clus.algo.tdidt.ClusNode
 
printTree() - Method in class si.ijs.kt.clus.ext.optiontree.ClusOptionNode
 
printTree() - Method in class si.ijs.kt.clus.statistic.WHTDStatistic
 
printTree(PrintWriter, String) - Method in class si.ijs.kt.clus.ext.optxval.OptXValNode
 
printTree(PrintWriter, StatisticPrintInfo, String) - Method in class si.ijs.kt.clus.algo.tdidt.ClusNode
 
printTree(PrintWriter, StatisticPrintInfo, String) - Method in class si.ijs.kt.clus.ext.optiontree.ClusOptionNode
 
printTree(PrintWriter, StatisticPrintInfo, String, RowData) - Method in class si.ijs.kt.clus.ext.optiontree.ClusOptionNode
 
printTree(PrintWriter, StatisticPrintInfo, String, RowData) - Method in class si.ijs.kt.clus.ext.optiontree.ClusSplitNode
 
printTree(PrintWriter, StatisticPrintInfo, String, RowData) - Method in class si.ijs.kt.clus.ext.optiontree.MyNode
 
printTree(PrintWriter, StatisticPrintInfo, String, RowData, boolean) - Method in class si.ijs.kt.clus.algo.tdidt.ClusNode
 
printTreeInDatabase(PrintWriter, String[], int[], int, String) - Method in class si.ijs.kt.clus.algo.tdidt.ClusNode
 
printTreeInDatabase(PrintWriter, String[], int[], int, String) - Method in class si.ijs.kt.clus.ext.optiontree.ClusOptionNode
 
printTreeInDatabase(PrintWriter, String[], int[], int, String) - Method in class si.ijs.kt.clus.ext.optiontree.ClusSplitNode
 
printTreeInDatabase(PrintWriter, String[], int[], int, String) - Method in class si.ijs.kt.clus.ext.optiontree.MyNode
 
printTreeToPythonScript(PrintWriter, String) - Method in class si.ijs.kt.clus.ext.optiontree.ClusOptionNode
 
printTreeToPythonScript(PrintWriter, String, HashMap<String, Integer>) - Method in class si.ijs.kt.clus.algo.tdidt.ClusNode
 
printTreeToPythonScriptIterative(PrintWriter, String, HashMap<String, Integer>) - Method in class si.ijs.kt.clus.algo.tdidt.ClusNode
The iterative version of the method for printing Python code.
printTreeToPythonTreeObject(PrintWriter, HashMap<String, Integer>, String) - Method in class si.ijs.kt.clus.algo.tdidt.ClusNode
 
printTrueValuesToFile(PrintWriter) - Method in class si.ijs.kt.clus.util.tools.optimization.OptimizationProblem
Print true values to output file.
printVotes() - Method in class si.ijs.kt.clus.model.processor.ClusEnsemblePredictionWriter
 
printWeights() - Method in class si.ijs.kt.clus.ext.hierarchicalmtr.ClusHMTRHierarchy
 
ProbabilityDistribution - Enum constant in enum class si.ijs.kt.clus.main.settings.section.SettingsEnsemble.EnsembleVotingType
 
process(String[]) - Method in class si.ijs.kt.clus.util.jeans.util.cmdline.CMDLineArgs
 
process(CMDLineArgs) - Method in class si.ijs.kt.clus.main.settings.Settings
 
processAttribute(ClassesAttrType, RowData) - Method in class si.ijs.kt.clus.distance.primitive.relief.HierarchicalMultiLabelDistance
 
processModels(ClusRun) - Method in class si.ijs.kt.clus.addon.hmc.HMCAverageSingleClass.HMCAverageNodeWiseModels
 
processs(MyArray, MyArray, MyArray, OptXValBinTree) - Static method in class si.ijs.kt.clus.ext.optxval.OptXValBinTree
 
Protein - Enum constant in enum class si.ijs.kt.clus.main.settings.section.SettingsPhylogeny.PhylogenySequence
 
prototypeDifference(CombStat) - Method in class si.ijs.kt.clus.statistic.CombStat
Calculates the difference
prototypeNom(int) - Method in class si.ijs.kt.clus.statistic.CombStat
Returns the prototype of a nominal attribute.
prototypeNum(int) - Method in class si.ijs.kt.clus.statistic.CombStat
Returns the prototype of a numeric attribute.
prune(int) - Method in class si.ijs.kt.clus.addon.hmc.HMCAverageSingleClass.HMCAverageTreeModel
 
prune(int) - Method in class si.ijs.kt.clus.algo.kNN.KnnModel
 
prune(int) - Method in class si.ijs.kt.clus.algo.rules.ClusRule
 
prune(int) - Method in class si.ijs.kt.clus.algo.rules.ClusRuleSet
 
prune(int) - Method in class si.ijs.kt.clus.algo.tdidt.ClusNode
 
prune(int) - Method in class si.ijs.kt.clus.ext.ensemble.ClusForest
 
prune(int) - Method in class si.ijs.kt.clus.ext.featureRanking.relief.ReliefModel
 
prune(int) - Method in class si.ijs.kt.clus.ext.optiontree.ClusOptionNode
 
prune(int) - Method in class si.ijs.kt.clus.ext.optiontree.ClusSplitNode
 
prune(int) - Method in interface si.ijs.kt.clus.model.ClusModel
 
prune(int, ClusNode) - Method in class si.ijs.kt.clus.ext.hierarchical.HierClassTresholdPruner
 
prune(int, ClusNode) - Method in class si.ijs.kt.clus.pruning.CartPruning
 
prune(int, ClusNode) - Method in class si.ijs.kt.clus.pruning.PruneTree
 
prune(int, ClusNode) - Method in class si.ijs.kt.clus.pruning.SizeConstraintPruning
 
prune(ClusNode) - Method in class si.ijs.kt.clus.ext.hierarchical.HierClassTresholdPruner
 
prune(ClusNode) - Method in class si.ijs.kt.clus.ext.hierarchical.HierRemoveInsigClasses
 
prune(ClusNode) - Method in class si.ijs.kt.clus.pruning.BottomUpPruningVSB
 
prune(ClusNode) - Method in class si.ijs.kt.clus.pruning.C45Pruner
 
prune(ClusNode) - Method in class si.ijs.kt.clus.pruning.EncodingCostPruning
 
prune(ClusNode) - Method in class si.ijs.kt.clus.pruning.M5Pruner
 
prune(ClusNode) - Method in class si.ijs.kt.clus.pruning.M5PrunerMulti
 
prune(ClusNode) - Method in class si.ijs.kt.clus.pruning.PruneTree
 
prune(ClusNode) - Method in class si.ijs.kt.clus.pruning.SequencePruningVSB
 
prune(ClusNode) - Method in class si.ijs.kt.clus.pruning.SizeConstraintPruning
 
prune(ClusNode, RowData) - Method in class si.ijs.kt.clus.pruning.BottomUpPruningVSB
 
PRUNE_INVALID - Static variable in interface si.ijs.kt.clus.model.ClusModel
 
pruneAll(ClusRun) - Method in class si.ijs.kt.clus.algo.ClusInductionAlgorithmType
 
pruneAll(ClusRun) - Method in class si.ijs.kt.clus.algo.kNN.KnnClassifier
 
pruneAll(ClusRun) - Method in class si.ijs.kt.clus.algo.rules.ClusRuleClassifier
 
pruneAll(ClusRun) - Method in class si.ijs.kt.clus.algo.tdidt.ClusDecisionTree
 
pruneAll(ClusRun) - Method in class si.ijs.kt.clus.ext.beamsearch.ClusBeamSearch
 
pruneAll(ClusRun) - Method in class si.ijs.kt.clus.ext.ensemble.ClusEnsembleClassifier
 
pruneAll(ClusRun) - Method in class si.ijs.kt.clus.ext.exhaustivesearch.ClusExhaustiveSearch
 
pruneAll(ClusRun) - Method in class si.ijs.kt.clus.ext.featureRanking.relief.Relief
 
pruneAll(ClusRun) - Method in class si.ijs.kt.clus.ext.optiontree.ClusOptionTree
 
pruneAll(ClusRun) - Method in class si.ijs.kt.clus.ext.semisupervised.ClusSemiSupervisedClassifier
 
pruneByTrainErr(ClusAttributeWeights) - Method in class si.ijs.kt.clus.algo.tdidt.ClusNode
 
pruneC45Recursive(ClusNode, RowData) - Method in class si.ijs.kt.clus.pruning.C45Pruner
 
Pruned - Enum constant in enum class si.ijs.kt.clus.main.settings.section.SettingsOutput.ShowModels
 
PRUNED - Static variable in interface si.ijs.kt.clus.model.ClusModel
The type of model returned.
pruneExampleList(RowData) - Method in class si.ijs.kt.clus.data.type.primitive.SparseNumericAttrType
Deprecated.
pruneExecute(ClusNode, int) - Method in class si.ijs.kt.clus.pruning.SizeConstraintPruning
 
pruneInitialize(ClusNode, int) - Method in class si.ijs.kt.clus.pruning.SizeConstraintPruning
 
pruneInvalid() - Method in class si.ijs.kt.clus.algo.tdidt.ClusNode
 
pruneMaxError(ClusNode, int) - Method in class si.ijs.kt.clus.pruning.SizeConstraintPruning
 
pruneNonMarkedNodes(ClusNode) - Method in class si.ijs.kt.clus.ext.beamsearch.ClusBeamSizeConstraints
 
pruneRecursive(ClusNode) - Method in class si.ijs.kt.clus.pruning.M5Pruner
 
pruneRecursive(ClusNode) - Method in class si.ijs.kt.clus.pruning.M5PrunerMulti
 
pruneRecursive(ClusNode, double) - Method in class si.ijs.kt.clus.ext.hierarchical.HierClassTresholdPruner
 
pruneSingle(ClusModel, ClusRun) - Method in class si.ijs.kt.clus.algo.ClusInductionAlgorithmType
 
pruneSingle(ClusModel, ClusRun) - Method in class si.ijs.kt.clus.algo.kNN.KnnClassifier
 
pruneSingle(ClusModel, ClusRun) - Method in class si.ijs.kt.clus.algo.rules.ClusRuleClassifier
 
pruneSingle(ClusModel, ClusRun) - Method in class si.ijs.kt.clus.algo.tdidt.ClusDecisionTree
 
pruneSingle(ClusModel, ClusRun) - Method in class si.ijs.kt.clus.ext.beamsearch.ClusBeamSearch
 
pruneSingle(ClusModel, ClusRun) - Method in class si.ijs.kt.clus.ext.ensemble.ClusEnsembleClassifier
 
pruneSingle(ClusModel, ClusRun) - Method in class si.ijs.kt.clus.ext.exhaustivesearch.ClusExhaustiveSearch
 
pruneSingle(ClusModel, ClusRun) - Method in class si.ijs.kt.clus.ext.featureRanking.relief.Relief
 
pruneSingle(ClusModel, ClusRun) - Method in class si.ijs.kt.clus.ext.optiontree.ClusOptionTree
 
pruneSingle(ClusModel, ClusRun) - Method in class si.ijs.kt.clus.ext.semisupervised.ClusSemiSupervisedClassifier
 
pruneToSizeK(ClusNode, int) - Static method in class si.ijs.kt.clus.pruning.SizeConstraintPruning
 
PruneTree - Class in si.ijs.kt.clus.pruning
 
PruneTree() - Constructor for class si.ijs.kt.clus.pruning.PruneTree
 
pruneUsingConstraints(ClusNode, int, double) - Method in class si.ijs.kt.clus.ext.beamsearch.ClusBeamSizeConstraints
 
push(int) - Method in class si.ijs.kt.clus.util.jeans.util.IntegerStack
 
pushBack() - Method in class si.ijs.kt.clus.util.jeans.util.MSStringTokenizer
 
pushbackchar - Variable in class si.ijs.kt.clus.util.jeans.util.MStreamTokenizer
 
pushbackchar - Variable in class si.ijs.kt.clus.util.jeans.util.MStringTokenizer
 
pushbackchar - Variable in class si.ijs.kt.clus.util.jeans.util.MTokenizer
 
pushBackChar(int) - Method in class si.ijs.kt.clus.util.jeans.util.MStreamTokenizer
 
pushBackChar(int) - Method in class si.ijs.kt.clus.util.jeans.util.MStringTokenizer
 
pushBackChar(int) - Method in class si.ijs.kt.clus.util.jeans.util.MTokenizer
 
pushbacktoken - Variable in class si.ijs.kt.clus.util.jeans.util.MStreamTokenizer
 
pushbacktoken - Variable in class si.ijs.kt.clus.util.jeans.util.MStringTokenizer
 
pushbacktoken - Variable in class si.ijs.kt.clus.util.jeans.util.MTokenizer
 
pushBackToken(String) - Method in class si.ijs.kt.clus.util.jeans.util.MStreamTokenizer
 
pushBackToken(String) - Method in class si.ijs.kt.clus.util.jeans.util.MStringTokenizer
 
pushBackToken(String) - Method in class si.ijs.kt.clus.util.jeans.util.MTokenizer
 
put1DArrayToOOBPredictions(DataTuple, double[]) - Method in class si.ijs.kt.clus.ext.ensemble.ClusOOBErrorEstimate
 
put2DArrayToOOBPredictions(DataTuple, double[][]) - Method in class si.ijs.kt.clus.ext.ensemble.ClusOOBErrorEstimate
 
putAttributeInfo(String, double[]) - Method in class si.ijs.kt.clus.ext.featureRanking.ClusFeatureRanking
 
putAttributesInfos(HashMap<String, double[][]>) - Method in class si.ijs.kt.clus.ext.featureRanking.ClusFeatureRanking
 
putAttributesInfos(HashMap<SettingsEnsemble.EnsembleRanking, HashMap<String, double[][]>>) - Method in class si.ijs.kt.clus.ext.featureRanking.ensemble.ClusEnsembleFeatureRankings
 
pythonTreeFunctionDefinition(int) - Static method in class si.ijs.kt.clus.ext.ensemble.ClusForest
 

Q

QDM - Enum constant in enum class si.ijs.kt.clus.main.settings.section.SettingsTimeSeries.TimeSeriesDistanceMeasure
 
QDM - Enum constant in enum class si.ijs.kt.clus.main.settings.section.SettingsTree.TimeSeriesDistanceMeasure
 
QDMTimeSeriesDist - Class in si.ijs.kt.clus.distance.primitive.timeseries
 
QDMTimeSeriesDist(TimeSeriesAttrType) - Constructor for class si.ijs.kt.clus.distance.primitive.timeseries.QDMTimeSeriesDist
 
Quadruple<T1,T2,T3,T4> - Class in si.ijs.kt.clus.util.tuple
Implements 4-Tuple.
Quadruple(T1, T2, T3, T4) - Constructor for class si.ijs.kt.clus.util.tuple.Quadruple
 
quickSort(Vector, int, int, MComparator) - Static method in class si.ijs.kt.clus.util.jeans.util.sort.MVectorSorter
 
quickSort(Vector, MComparator) - Static method in class si.ijs.kt.clus.util.jeans.util.sort.MVectorSorter
 
quickSort(MSortable, int, int) - Static method in class si.ijs.kt.clus.util.jeans.util.sort.MSorter
Deprecated.
 

R

rad2deg(double) - Method in class si.ijs.kt.clus.heuristic.GISHeuristic
 
rad2deg(double) - Method in class si.ijs.kt.clus.heuristic.VarianceReductionHeuristicCompatibility
 
randDepthWighExponentialDistribution(double, int) - Static method in class si.ijs.kt.clus.util.tools.optimization.gd.GDProblem
Return a maximum tree depth based on RulefFit (Friedman, Popescu.
RANDOM_ALGO_INTERNAL - Static variable in class si.ijs.kt.clus.util.ClusRandom
 
RANDOM_CREATE_DATA - Static variable in class si.ijs.kt.clus.util.ClusRandom
 
RANDOM_ENSEMBLE_ROS - Static variable in class si.ijs.kt.clus.util.ClusRandom
Used for ensemble target subspacing
RANDOM_ENSEMBLE_ROS_SUBSPACE_SIZE_SELECTION - Static variable in class si.ijs.kt.clus.util.ClusRandom
Used for ensemble target subspacing - poisson sampling of the mean
RANDOM_EXTRATREE - Static variable in class si.ijs.kt.clus.util.ClusRandom
Used for random split-point selection for Extra-Trees Ensembles
RANDOM_EXTRATREE - Static variable in class si.ijs.kt.clus.util.ClusRandomNonstatic
 
RANDOM_GAUSSIAN - Static variable in class si.ijs.kt.clus.ext.semisupervised.confidence.RandomScore
 
RANDOM_INT_RANFOR_TREE_DEPTH - Static variable in class si.ijs.kt.clus.util.ClusRandom
Used for random forest random tree depth, because RANDOM_ALGO_INTERNAL may already be used somewhere else for tree ensemble induce.
RANDOM_INT_RANFOR_TREE_DEPTH - Static variable in class si.ijs.kt.clus.util.ClusRandomNonstatic
 
RANDOM_PARAM_TUNE - Static variable in class si.ijs.kt.clus.util.ClusRandom
 
RANDOM_SAMPLE - Static variable in class si.ijs.kt.clus.util.ClusRandom
Used for sampling in RowData
RANDOM_SAMPLE - Static variable in class si.ijs.kt.clus.util.ClusRandomNonstatic
 
RANDOM_SEED - Static variable in class si.ijs.kt.clus.util.ClusRandomNonstatic
 
RANDOM_SELECTION - Static variable in class si.ijs.kt.clus.util.ClusRandom
 
RANDOM_SELECTION - Static variable in class si.ijs.kt.clus.util.ClusRandomNonstatic
 
RANDOM_TEST_DIR - Static variable in class si.ijs.kt.clus.util.ClusRandom
 
RANDOM_UNIFORM - Static variable in class si.ijs.kt.clus.ext.semisupervised.confidence.RandomScore
 
RandomForest - Enum constant in enum class si.ijs.kt.clus.main.settings.section.SettingsRules.InitialRuleGeneratingMethod
 
RandomForestWeighting - Class in si.ijs.kt.clus.algo.kNN.distance.attributeWeighting
 
RandomForestWeighting(ClusRun, int) - Constructor for class si.ijs.kt.clus.algo.kNN.distance.attributeWeighting.RandomForestWeighting
 
RandomGaussian - Enum constant in enum class si.ijs.kt.clus.main.settings.section.SettingsSSL.SSLConfidenceMeasure
RandomGaussian - normally distribuited random scores
RandomRuleSet - Enum constant in enum class si.ijs.kt.clus.main.settings.section.SettingsRules.CoveringMethod
Evaluates rules in the context of complete rule set, separate rules are constructed randomly: unordered rules.
RandomScore - Class in si.ijs.kt.clus.ext.semisupervised.confidence
Returns random numbers as reliability scores, two modes are possible: RANDOM_UNIFORM: random numbers are generated uniformly in [0,1] RANDOM_GAUSSIAN: random numbers are normally distribution in [0,1] with mean 0.5 and std.
RandomScore(ClusStatManager, int) - Constructor for class si.ijs.kt.clus.ext.semisupervised.confidence.RandomScore
 
RandomSelection - Class in si.ijs.kt.clus.selection
 
RandomSelection(int, double) - Constructor for class si.ijs.kt.clus.selection.RandomSelection
 
RandomSelection(int, double, int) - Constructor for class si.ijs.kt.clus.selection.RandomSelection
 
RandomSelection(int, int) - Constructor for class si.ijs.kt.clus.selection.RandomSelection
 
RandomSelection(int, int, int) - Constructor for class si.ijs.kt.clus.selection.RandomSelection
 
RandomUniform - Enum constant in enum class si.ijs.kt.clus.main.settings.section.SettingsSSL.SSLConfidenceMeasure
RandomUniform - uniformly distribuited random scores
range(int) - Static method in class si.ijs.kt.clus.ext.featureRanking.relief.statistics.Steepness
 
range(int, int) - Static method in class si.ijs.kt.clus.ext.featureRanking.relief.statistics.Steepness
 
RankCorrelations - Variable in class si.ijs.kt.clus.error.SpearmanRankCorrelationPerExample
 
rankFeatures(ClusNode, RowData) - Method in class si.ijs.kt.clus.ext.bestfirst.BestFirstInduce
Deprecated.
rankFeatures(ClusNode, RowData, ClusRandomNonstatic) - Method in class si.ijs.kt.clus.algo.tdidt.DepthFirstInduce
Deprecated.
Ranking - Class in si.ijs.kt.clus.ext.semisupervised.confidence.normalization
On the basis of the given per-target confidence scores, provides ranking based confidence scores: per-target scores are ranked, independently for each target
Ranking - Enum constant in enum class si.ijs.kt.clus.main.settings.section.SettingsSSL.SSLNormalization
ranks per target scores according to their reliability
Ranking(int) - Constructor for class si.ijs.kt.clus.ext.semisupervised.confidence.normalization.Ranking
 
RankingLoss - Class in si.ijs.kt.clus.error.mlc
 
RankingLoss - Class in si.ijs.kt.clus.error.mlcForHmlc
 
RankingLoss - Enum constant in enum class si.ijs.kt.clus.main.settings.section.SettingsMLC.MultiLabelMeasures
 
RankingLoss() - Constructor for class si.ijs.kt.clus.error.mlcForHmlc.RankingLoss
 
RankingLoss(ClusErrorList, NominalAttrType[]) - Constructor for class si.ijs.kt.clus.error.mlc.RankingLoss
 
RDispersionAdt - Enum constant in enum class si.ijs.kt.clus.main.settings.section.SettingsTree.Heuristic
 
rDispersionAdtHeur() - Method in class si.ijs.kt.clus.statistic.CombStat
Weighted relative dispersion based heuristic - additive version Smaller values are better!
RDispersionMlt - Enum constant in enum class si.ijs.kt.clus.main.settings.section.SettingsTree.Heuristic
 
rDispersionMltHeur() - Method in class si.ijs.kt.clus.statistic.CombStat
Weighted relative dispersion based heuristic - multiplicative version Smaller values are better!
read() - Method in class si.ijs.kt.clus.util.jeans.util.MStringTokenizer
 
read() - Method in class si.ijs.kt.clus.util.jeans.util.MTokenizer
 
read(String, Settings) - Static method in class si.ijs.kt.clus.distance.complex.tuples.SSPDMatrix
 
read(ClusReader, int) - Method in class si.ijs.kt.clus.data.cols.attribute.NominalAttribute
 
read(ClusReader, int) - Method in class si.ijs.kt.clus.data.cols.attribute.NominalTarget
 
read(ClusReader, int) - Method in class si.ijs.kt.clus.data.cols.attribute.NumericAttribute
 
read(ClusReader, int) - Method in class si.ijs.kt.clus.data.cols.attribute.NumericTarget
 
read(ClusReader, int) - Method in class si.ijs.kt.clus.data.cols.attribute.TimeSeriesAttribute
 
read(ClusReader, int) - Method in class si.ijs.kt.clus.data.cols.attribute.TimeSeriesTarget
 
read(ClusReader, int) - Method in class si.ijs.kt.clus.data.type.primitive.IndexAttrType.MyReader
 
read(ClusReader, int) - Method in class si.ijs.kt.clus.util.io.DummySerializable
 
read(ClusReader, DataTuple) - Method in class si.ijs.kt.clus.data.type.complex.SetAttrType.MySerializable
 
read(ClusReader, DataTuple) - Method in class si.ijs.kt.clus.data.type.complex.TupleAttrType.MySerializable
 
read(ClusReader, DataTuple) - Method in class si.ijs.kt.clus.data.type.hierarchies.ClassesAttrType.MySerializable
 
read(ClusReader, DataTuple) - Method in class si.ijs.kt.clus.data.type.hierarchies.FlatClassesAttrType.MySerializable
 
read(ClusReader, DataTuple) - Method in class si.ijs.kt.clus.data.type.primitive.IndexAttrType.MyReader
 
read(ClusReader, DataTuple) - Method in class si.ijs.kt.clus.data.type.primitive.IntegerAttrType.MySerializable
 
read(ClusReader, DataTuple) - Method in class si.ijs.kt.clus.data.type.primitive.NominalAttrType.MySerializable
 
read(ClusReader, DataTuple) - Method in class si.ijs.kt.clus.data.type.primitive.NumericAttrType.MySerializable
 
read(ClusReader, DataTuple) - Method in class si.ijs.kt.clus.data.type.primitive.SparseNumericAttrType.MySerializable
 
read(ClusReader, DataTuple) - Method in class si.ijs.kt.clus.data.type.primitive.StringAttrType.MySerializable
 
read(ClusReader, DataTuple) - Method in class si.ijs.kt.clus.data.type.primitive.TimeSeriesAttrType.MySerializable
 
read(ClusReader, DataTuple) - Method in class si.ijs.kt.clus.util.io.ClusSerializable
 
read(ClusReader, DataTuple) - Method in class si.ijs.kt.clus.util.io.DummySerializable
 
read(Settings) - Method in class si.ijs.kt.clus.data.io.ARFFFile
 
read(Settings, ClusStatistic) - Method in class si.ijs.kt.clus.heuristic.GeneticDistanceHeuristicMatrix
 
read(MStreamTokenizer, char, char) - Method in class si.ijs.kt.clus.util.jeans.util.array.MDoubleArray
 
read(MStreamTokenizer, char, char) - Method in class si.ijs.kt.clus.util.jeans.util.array.MIntArray
 
readArff(String) - Static method in class si.ijs.kt.clus.data.io.ARFFFile
 
readChar() - Method in class si.ijs.kt.clus.util.jeans.util.MStreamTokenizer
 
readChar() - Method in class si.ijs.kt.clus.util.jeans.util.MStringTokenizer
 
readChar() - Method in class si.ijs.kt.clus.util.jeans.util.MTokenizer
 
readChar(char) - Method in class si.ijs.kt.clus.util.jeans.util.MStreamTokenizer
 
readChar(char) - Method in class si.ijs.kt.clus.util.jeans.util.MStringTokenizer
 
readChar(char) - Method in class si.ijs.kt.clus.util.jeans.util.MTokenizer
 
readChar(String) - Method in class si.ijs.kt.clus.util.jeans.util.MStreamTokenizer
 
readChar(String) - Method in class si.ijs.kt.clus.util.jeans.util.MStringTokenizer
 
readChar(String) - Method in class si.ijs.kt.clus.util.jeans.util.MTokenizer
 
readCharNoPushback() - Method in class si.ijs.kt.clus.util.jeans.util.MStreamTokenizer
 
readCharTokens(String, MStringTokenizer) - Method in class si.ijs.kt.clus.model.io.ClusTreeReader
 
readData(String, ClusSchema) - Static method in class si.ijs.kt.clus.data.rows.RowData
 
readData(ClusReader, ClusSchema) - Method in class si.ijs.kt.clus.data.io.ClusView
 
readData(ClusReader, ClusSchema, boolean) - Method in class si.ijs.kt.clus.data.io.ClusView
 
readDataHMTR(ClusReader, ClusSchema, ClusHMTRHierarchy, Settings) - Method in class si.ijs.kt.clus.data.io.ClusView
 
readDataHMTRTuple(ClusReader, ClusSchema, boolean, ClusHMTRHierarchy, String) - Method in class si.ijs.kt.clus.data.io.ClusView
 
readDataHMTRTuple(ClusReader, ClusSchema, ClusHMTRHierarchy, String) - Method in class si.ijs.kt.clus.data.io.ClusView
 
readDataHMTRTupleFirst(ClusReader, ClusSchema, ClusHMTRHierarchy, String) - Method in class si.ijs.kt.clus.data.io.ClusView
 
readDataHMTRTupleNext(ClusReader, ClusSchema, ClusHMTRHierarchy, String) - Method in class si.ijs.kt.clus.data.io.ClusView
 
readDataTuple(ClusReader, ClusSchema) - Method in class si.ijs.kt.clus.data.io.ClusView
 
readDataTuple(ClusReader, ClusSchema, boolean) - Method in class si.ijs.kt.clus.data.io.ClusView
 
readDataTupleFirst(ClusReader, ClusSchema) - Method in class si.ijs.kt.clus.data.io.ClusView
 
readDataTupleNext(ClusReader, ClusSchema) - Method in class si.ijs.kt.clus.data.io.ClusView
 
readEol() - Method in class si.ijs.kt.clus.data.io.ClusReader
 
reader - Variable in class si.ijs.kt.clus.util.jeans.util.MStreamTokenizer
 
readFloat() - Method in class si.ijs.kt.clus.data.io.ClusReader
 
readFloat() - Method in class si.ijs.kt.clus.util.jeans.util.MStreamTokenizer
 
readFloat() - Method in class si.ijs.kt.clus.util.jeans.util.MStringTokenizer
 
readFloat() - Method in class si.ijs.kt.clus.util.jeans.util.MTokenizer
 
readFoldsFile(String, int) - Static method in class si.ijs.kt.clus.selection.XValDataSelection
 
readFromFile(String, ClassHierarchy) - Static method in class si.ijs.kt.clus.ext.hierarchical.ClassesTuple
 
readHierarchy(String) - Method in class si.ijs.kt.clus.ext.hierarchical.HierIO
 
readHMTRAttribute(ClusReader, DataTuple, ClusSchema, ClusHMTRHierarchy, String) - Method in class si.ijs.kt.clus.data.type.primitive.NumericAttrType.MySerializable
 
readHMTRAttribute(ClusReader, DataTuple, ClusSchema, ClusHMTRHierarchy, String) - Method in class si.ijs.kt.clus.util.io.ClusSerializable
 
readingLock() - Method in class si.ijs.kt.clus.ext.ensemble.ClusReadWriteLock
 
readingUnlock() - Method in class si.ijs.kt.clus.ext.ensemble.ClusReadWriteLock
 
readInteger() - Method in class si.ijs.kt.clus.util.jeans.util.MStreamTokenizer
 
readInteger() - Method in class si.ijs.kt.clus.util.jeans.util.MStringTokenizer
 
readInteger() - Method in class si.ijs.kt.clus.util.jeans.util.MTokenizer
 
readIntIndex() - Method in class si.ijs.kt.clus.data.io.ClusReader
 
readLine() - Method in class si.ijs.kt.clus.model.io.ClusTreeReader
 
readMatrixFromFile(RowData) - Method in class si.ijs.kt.clus.heuristic.GISHeuristic
 
readMatrixFromFile(RowData) - Method in class si.ijs.kt.clus.heuristic.VarianceReductionHeuristicCompatibility
 
readMultiValue(boolean[], NominalAttrType, MStringTokenizer) - Method in class si.ijs.kt.clus.model.io.ClusTreeReader
 
readName() - Method in class si.ijs.kt.clus.data.io.ClusReader
 
readNextChild(ClusNode, String[], boolean[]) - Method in class si.ijs.kt.clus.model.io.ClusTreeReader
 
readNextEntry(MStreamTokenizer) - Method in class si.ijs.kt.clus.util.jeans.io.ini.INIFileArray
 
readNextEntry(MStreamTokenizer) - Method in class si.ijs.kt.clus.util.jeans.io.ini.INIFileNominal
 
readNextEntry(MStreamTokenizer) - Method in class si.ijs.kt.clus.util.jeans.io.ini.INIFileNominalOrDoubleOrVector
 
readNextEntry(MStreamTokenizer) - Method in class si.ijs.kt.clus.util.jeans.io.ini.INIFileNominalOrIntOrVector
 
readNominalTest(ClusAttrType, ClusNode, MStringTokenizer) - Method in class si.ijs.kt.clus.model.io.ClusTreeReader
 
readNoSpace() - Method in class si.ijs.kt.clus.data.io.ClusReader
 
readNumericTest(ClusAttrType, ClusNode, MStringTokenizer) - Method in class si.ijs.kt.clus.model.io.ClusTreeReader
 
readSet() - Method in class si.ijs.kt.clus.data.io.ClusReader
 
readSignificantChar() - Method in class si.ijs.kt.clus.util.jeans.util.MStreamTokenizer
 
readSignificantChar() - Method in class si.ijs.kt.clus.util.jeans.util.MStringTokenizer
 
readSignificantChar() - Method in class si.ijs.kt.clus.util.jeans.util.MTokenizer
 
readSingleValue(boolean[], NominalAttrType, MStringTokenizer) - Method in class si.ijs.kt.clus.model.io.ClusTreeReader
 
readStream(InputStream) - Static method in class si.ijs.kt.clus.util.ClusUtil
 
readString() - Method in class si.ijs.kt.clus.data.io.ClusReader
 
readTest(ClusAttrType, ClusNode, MStringTokenizer) - Method in class si.ijs.kt.clus.model.io.ClusTreeReader
 
readTextFile(String) - Static method in class si.ijs.kt.clus.util.jeans.util.FileUtil
Reads a Text File and Returns a list of all the Lines of Text.
readTillEol() - Method in class si.ijs.kt.clus.data.io.ClusReader
 
readTillEol() - Method in class si.ijs.kt.clus.util.jeans.util.MStreamTokenizer
 
readTillEol() - Method in class si.ijs.kt.clus.util.jeans.util.MTokenizer
 
readTimeSeries() - Method in class si.ijs.kt.clus.data.io.ClusReader
 
readToken() - Method in class si.ijs.kt.clus.util.jeans.util.MStreamTokenizer
 
readToken() - Method in class si.ijs.kt.clus.util.jeans.util.MStringTokenizer
 
readToken() - Method in class si.ijs.kt.clus.util.jeans.util.MTokenizer
 
readTree(String) - Method in class si.ijs.kt.clus.model.io.ClusTreeReader
 
readTree(String, LineNumberReader) - Method in class si.ijs.kt.clus.model.io.ClusTreeReader
 
readTuple() - Method in class si.ijs.kt.clus.data.io.ClusReader
 
readTuple() - Method in class si.ijs.kt.clus.data.rows.FileTupleIterator
 
readTuple() - Method in class si.ijs.kt.clus.data.rows.MemoryTupleIterator
 
readTuple() - Method in class si.ijs.kt.clus.data.rows.TupleIterator
 
readWildCardChild(ClusNode, boolean[]) - Method in class si.ijs.kt.clus.model.io.ClusTreeReader
 
REAL_PRED - Static variable in class si.ijs.kt.clus.error.ContingencyTable
 
realcost - Variable in class si.ijs.kt.clus.ext.beamsearch.ClusBeamSizeConstraintInfo
 
Recall - Class in si.ijs.kt.clus.error.sets
 
Recall(ClusErrorList, SetAttrType[], ClusAttributeWeights, boolean, ClusDistance) - Constructor for class si.ijs.kt.clus.error.sets.Recall
 
Recall(ClusErrorList, SetAttrType[], ClusAttributeWeights, ClusDistance) - Constructor for class si.ijs.kt.clus.error.sets.Recall
 
Recall(ClusErrorList, SetAttrType[], ClusDistance) - Constructor for class si.ijs.kt.clus.error.sets.Recall
 
recreateInduce(CMDLineArgs, ClusInductionAlgorithmType, ClusSchema, RowData) - Method in class si.ijs.kt.clus.Clus
Method for recreating ClusInduce and most other instance variables Useful for running Clus on different data sets with a similar schema
recursiveFind(File, String) - Static method in class si.ijs.kt.clus.util.jeans.util.FileUtil
 
recursiveFindAll(File, String, ArrayList) - Static method in class si.ijs.kt.clus.util.jeans.util.FileUtil
 
recursiveInitialize(ClusNode, ErrorVisitor) - Static method in class si.ijs.kt.clus.pruning.TreeErrorComputer
 
ReducedError - Enum constant in enum class si.ijs.kt.clus.main.settings.section.SettingsTree.Heuristic
 
ReducedErrorHeuristic - Class in si.ijs.kt.clus.heuristic
 
ReducedErrorHeuristic(ClusStatistic, Settings) - Constructor for class si.ijs.kt.clus.heuristic.ReducedErrorHeuristic
 
ReducedErrorVSB - Enum constant in enum class si.ijs.kt.clus.main.settings.section.SettingsTree.PruningMethod
 
refineBeam(ClusBeam) - Method in class si.ijs.kt.clus.algo.rules.ClusRuleConstraintInduce
 
refineBeam(ClusBeam) - Method in class si.ijs.kt.clus.algo.rules.ClusRuleInduce
 
refineBeam(ClusBeam, ClusRun) - Method in class si.ijs.kt.clus.ext.beamsearch.ClusBeamSearch
 
refineBeam(ClusBeam, ClusRun) - Method in class si.ijs.kt.clus.ext.beamsearch.ClusFastBeamSearch
 
refineBeamExhaustive(ClusBeam, ClusRun) - Method in class si.ijs.kt.clus.ext.exhaustivesearch.ClusExhaustiveSearch
 
refineEachLeaf(ClusNode, ClusBeamModel, ClusBeam, ClusAttrType[]) - Method in class si.ijs.kt.clus.ext.beamsearch.ClusBeamSearch
 
refineEachLeaf(ClusNode, ClusBeamModel, ClusBeam, ClusAttrType[]) - Method in class si.ijs.kt.clus.ext.exhaustivesearch.ClusExhaustiveSearch
 
refineEachLeafDF(ClusNode, ClusBeamModel, ClusBeam, ClusAttrType[], ClusRun) - Method in class si.ijs.kt.clus.ext.exhaustivesearch.ClusExhaustiveDFSearch
 
refineGivenLeaf(ClusNode, ClusBeamModel, ClusBeam, ClusAttrType[]) - Method in class si.ijs.kt.clus.ext.beamsearch.ClusBeamSearch
 
refineGivenLeaf(ClusNode, ClusBeamModel, ClusBeam, ClusAttrType[]) - Method in class si.ijs.kt.clus.ext.beamsearch.ClusFastBeamSearch
 
refineGivenLeafExhaustive(ClusNode, ClusBeamModel, ClusBeam, ClusAttrType[]) - Method in class si.ijs.kt.clus.ext.exhaustivesearch.ClusExhaustiveSearch
 
refineGivenLeafExhaustiveDF(ClusNode, ClusBeamModel, ClusBeam, ClusAttrType[], ClusRun) - Method in class si.ijs.kt.clus.ext.exhaustivesearch.ClusExhaustiveDFSearch
 
refineGraph(ArrayList<SingleStatList>, ClusRun[], SizeConstraintPruning[], int, ClusSummary) - Method in class si.ijs.kt.clus.algo.tdidt.tune.CDTuneSizeConstrPruning
 
refineModel(ClusBeamModel, ClusBeam, int) - Method in class si.ijs.kt.clus.algo.rules.ClusRuleConstraintInduce
 
refineModel(ClusBeamModel, ClusBeam, int) - Method in class si.ijs.kt.clus.algo.rules.ClusRuleInduce
 
refineModel(ClusBeamModel, ClusBeam, ClusRun) - Method in class si.ijs.kt.clus.ext.beamsearch.ClusBeamSearch
 
refineModel(ClusBeamModel, ClusBeam, ClusRun) - Method in class si.ijs.kt.clus.ext.beamsearch.ClusFastBeamSearch
 
refineModel(ClusBeamModel, ClusBeam, ClusRun) - Method in class si.ijs.kt.clus.ext.exhaustivesearch.ClusExhaustiveDFSearch
 
refineModel(ClusBeamModel, ClusBeam, ClusRun) - Method in class si.ijs.kt.clus.ext.exhaustivesearch.ClusExhaustiveSearch
 
registerConstant(Class<?>, String) - Method in class si.ijs.kt.clus.util.cloner.Cloner
 
registerConstant(Object) - Method in class si.ijs.kt.clus.util.cloner.Cloner
 
registerFastCloner(Class<?>, IFastCloner) - Method in class si.ijs.kt.clus.util.cloner.Cloner
 
registerFastCloners() - Method in class si.ijs.kt.clus.util.cloner.Cloner
registers a std set of fast cloners.
registerImmutable(Class<?>...) - Method in class si.ijs.kt.clus.util.cloner.Cloner
registers an immutable class.
registerKnownConstants() - Method in class si.ijs.kt.clus.util.cloner.Cloner
 
registerKnownJdkImmutableClasses() - Method in class si.ijs.kt.clus.util.cloner.Cloner
registers some known JDK immutable classes.
registerStaticFields(Class<?>...) - Method in class si.ijs.kt.clus.util.cloner.Cloner
registers all static fields of these classes.
REGRESSION - Enum constant in enum class si.ijs.kt.clus.main.ClusStatManager.Mode
 
REGRESSION - Enum constant in enum class si.ijs.kt.clus.main.ClusStatManager.TargetType
 
RegressionStat - Class in si.ijs.kt.clus.statistic
 
RegressionStat(Settings, NumericAttrType[]) - Constructor for class si.ijs.kt.clus.statistic.RegressionStat
 
RegressionStat(Settings, NumericAttrType[], boolean) - Constructor for class si.ijs.kt.clus.statistic.RegressionStat
 
RegressionStat(Settings, NumericAttrType[], ClusHMTRHierarchy) - Constructor for class si.ijs.kt.clus.statistic.RegressionStat
 
RegressionStat(Settings, NumericAttrType[], ClusHMTRHierarchy, boolean) - Constructor for class si.ijs.kt.clus.statistic.RegressionStat
 
RegressionStatBase - Class in si.ijs.kt.clus.statistic
 
RegressionStatBase(Settings, NumericAttrType[]) - Constructor for class si.ijs.kt.clus.statistic.RegressionStatBase
 
RegressionStatBase(Settings, NumericAttrType[], boolean) - Constructor for class si.ijs.kt.clus.statistic.RegressionStatBase
 
RegressionStatBinaryNomiss - Class in si.ijs.kt.clus.statistic
 
RegressionStatBinaryNomiss(Settings, NumericAttrType[]) - Constructor for class si.ijs.kt.clus.statistic.RegressionStatBinaryNomiss
 
RegressionStatBinaryNomiss(Settings, NumericAttrType[], boolean) - Constructor for class si.ijs.kt.clus.statistic.RegressionStatBinaryNomiss
 
REGULAR_TREE - Static variable in class si.ijs.kt.clus.algo.ClusInductionAlgorithmType
 
regularization(ArrayList<Double>) - Method in class si.ijs.kt.clus.util.tools.optimization.OptimizationProblem
Regularization penalty for the optimization function.
reInitClusteringStat(RowData) - Method in class si.ijs.kt.clus.algo.tdidt.ClusNode
 
reInitTargetStat(RowData) - Method in class si.ijs.kt.clus.algo.tdidt.ClusNode
 
RELATIVE_ERROR - Static variable in class si.ijs.kt.clus.error.common.ClusError
 
RELATIVE_POSTFIX - Static variable in class si.ijs.kt.clus.error.common.ClusError
 
RelativeError - Class in si.ijs.kt.clus.error
 
RelativeError(ClusErrorList, NumericAttrType[]) - Constructor for class si.ijs.kt.clus.error.RelativeError
 
RelativeError(ClusErrorList, NumericAttrType[], String) - Constructor for class si.ijs.kt.clus.error.RelativeError
 
RelativeError(ClusErrorList, NumericAttrType[], ClusAttributeWeights) - Constructor for class si.ijs.kt.clus.error.RelativeError
 
RelativeError(ClusErrorList, NumericAttrType[], ClusAttributeWeights, boolean) - Constructor for class si.ijs.kt.clus.error.RelativeError
 
RelativeError(ClusErrorList, NumericAttrType[], ClusAttributeWeights, boolean, String) - Constructor for class si.ijs.kt.clus.error.RelativeError
 
relativePath(String, String) - Static method in class si.ijs.kt.clus.util.jeans.util.FileUtil
 
Relief - Class in si.ijs.kt.clus.ext.featureRanking.relief
 
Relief(Clus) - Constructor for class si.ijs.kt.clus.ext.featureRanking.relief.Relief
 
RELIEF_ITERATIONS_DEFAULT - Static variable in class si.ijs.kt.clus.main.settings.section.SettingsRelief
 
RELIEF_NEIGHBOUR_DEFAULT - Static variable in class si.ijs.kt.clus.main.settings.section.SettingsRelief
Section: Relief *
ReliefInduce - Class in si.ijs.kt.clus.ext.featureRanking.relief
 
ReliefInduce(ClusInductionAlgorithm) - Constructor for class si.ijs.kt.clus.ext.featureRanking.relief.ReliefInduce
 
ReliefInduce(ClusSchema, Settings) - Constructor for class si.ijs.kt.clus.ext.featureRanking.relief.ReliefInduce
 
ReliefModel - Class in si.ijs.kt.clus.ext.featureRanking.relief
 
ReliefModel(int[], int[], boolean, double, RowData) - Constructor for class si.ijs.kt.clus.ext.featureRanking.relief.ReliefModel
 
rememberMinMax(NominalAttrType, RowData) - Method in class si.ijs.kt.clus.algo.split.FindBestTest
 
remove(int, int[]) - Static method in class si.ijs.kt.clus.util.jeans.util.array.MyIntArray
 
remove(ClusRule) - Method in class si.ijs.kt.clus.algo.rules.ClusRuleSet
Remove given rule from this rule set
removeAllChildren() - Method in class si.ijs.kt.clus.ext.optiontree.MyNode
 
removeAllChildren() - Method in class si.ijs.kt.clus.util.jeans.tree.MyNode
 
removeAllElements() - Method in class si.ijs.kt.clus.util.jeans.io.ini.INIFileArray
 
removeAllElements() - Method in class si.ijs.kt.clus.util.jeans.util.array.MyIntArray
 
removeAllElements() - Method in class si.ijs.kt.clus.util.jeans.util.MyArray
 
removeChar(String, char) - Static method in class si.ijs.kt.clus.util.jeans.util.StringUtils
 
removeChild(int) - Method in class si.ijs.kt.clus.ext.hierarchical.ClassTerm
 
removeChild(int) - Method in class si.ijs.kt.clus.ext.optiontree.MyNode
 
removeChild(int) - Method in class si.ijs.kt.clus.util.jeans.tree.MyNode
 
removeChild(MyNode) - Method in class si.ijs.kt.clus.ext.optiontree.MyNode
 
removeChild(Node) - Method in class si.ijs.kt.clus.ext.hierarchical.ClassTerm
 
removeChild(Node) - Method in class si.ijs.kt.clus.util.jeans.tree.BinaryNode
 
removeChild(Node) - Method in class si.ijs.kt.clus.util.jeans.tree.MyNode
 
removeChild(Node) - Method in interface si.ijs.kt.clus.util.jeans.tree.Node
 
removeChild(Node) - Method in class si.ijs.kt.clus.util.jeans.tree.SimpleNode
 
removeChild(Node) - Method in class si.ijs.kt.clus.util.jeans.tree.VisitableNode
 
removeCovered(RowData) - Method in class si.ijs.kt.clus.algo.rules.ClusRule
 
removeCoveredEnough(RowData) - Method in class si.ijs.kt.clus.algo.rules.ClusRule
Removes examples that have been covered by enough rules, i.e., rules that have weights below the threshold.
removeDataFromRules() - Method in class si.ijs.kt.clus.algo.rules.ClusRuleSet
Removes the data tuples from rules and from m_DefaultData array.
removeDataTuples() - Method in class si.ijs.kt.clus.algo.rules.ClusRule
Removes the data tuples from the m_Data array
removeElement(Object) - Method in class si.ijs.kt.clus.util.jeans.util.MyArray
 
removeElementAt(int) - Method in class si.ijs.kt.clus.util.jeans.util.array.MyIntArray
 
removeElementAt(int) - Method in class si.ijs.kt.clus.util.jeans.util.MyArray
 
removeEmptyRules() - Method in class si.ijs.kt.clus.algo.rules.ClusRuleSet
 
removeFirst() - Method in class si.ijs.kt.clus.ext.beamsearch.ClusBeamTreeElem
 
removeFirst() - Method in class si.ijs.kt.clus.ext.beamsearch.ClusBeamTreeElemOld
 
removeInfrequentClasses(WHTDStatistic, double) - Method in class si.ijs.kt.clus.ext.hierarchical.ClassHierarchy
 
removeLabels(boolean[]) - Method in class si.ijs.kt.clus.ext.hierarchical.ClassesTuple
 
removeLabelsFromData(RowData, ClassesAttrType, boolean[]) - Method in class si.ijs.kt.clus.addon.hmc.HMCConvertDAGData.HMCConvertDAGData
 
removeLastRule() - Method in class si.ijs.kt.clus.algo.rules.ClusRuleSet
 
removeLowWeightRules() - Method in class si.ijs.kt.clus.algo.rules.ClusRuleSet
Remove rules that have less weight than OptRuleWeightThreshold set in .s file.
removeMin() - Method in class si.ijs.kt.clus.ext.beamsearch.ClusBeam
 
removeMinUpdated(ClusBeamModel) - Method in class si.ijs.kt.clus.ext.beamsearch.ClusBeam
Dragi This part is used only when we have similarity constraints
removeMinUpdatedOpt(ClusBeamModel, ClusBeamModelDistance) - Method in class si.ijs.kt.clus.ext.beamsearch.ClusBeam
 
removeMinusOnes() - Method in class si.ijs.kt.clus.util.jeans.util.array.MyIntArray
 
removeMissingTarget(RowData) - Static method in class si.ijs.kt.clus.selection.CriterionBasedSelection
 
removeModels() - Method in class si.ijs.kt.clus.ext.ensemble.ClusForest
 
removeParentNodes(boolean[]) - Method in class si.ijs.kt.clus.ext.hierarchical.ClassHierarchy
 
removeParentNodes(ClassTerm, boolean[]) - Static method in class si.ijs.kt.clus.ext.hierarchical.ClassHierarchy
 
removeParentNodesRec(ClassTerm, boolean[]) - Static method in class si.ijs.kt.clus.ext.hierarchical.ClassHierarchy
 
removeParentNodesRecursive(ClassTerm, boolean[]) - Method in class si.ijs.kt.clus.ext.hierarchical.ClassHierarchy
 
removePath(String) - Static method in class si.ijs.kt.clus.util.jeans.util.FileUtil
 
removeSingleQuote(String) - Static method in class si.ijs.kt.clus.util.jeans.util.StringUtils
 
removeSuffix(String, String) - Static method in class si.ijs.kt.clus.util.jeans.util.StringUtils
 
removeTest(int) - Method in class si.ijs.kt.clus.algo.rules.ClusRule
 
removeVisitors(ClusNode) - Static method in class si.ijs.kt.clus.ext.beamsearch.ClusBeamSizeConstraints
 
removeWeighted(DataTuple, double) - Method in class si.ijs.kt.clus.ext.ilevelc.ILevelCHeurStat
 
reOpen() - Method in class si.ijs.kt.clus.data.io.ClusReader
 
replaceChars(String, char, char) - Static method in class si.ijs.kt.clus.util.jeans.util.StringUtils
 
replicateEmpty(double[][]) - Method in class si.ijs.kt.clus.ext.beamsearch.ClusBeamSimClassStat
 
rescale(double, double) - Method in class si.ijs.kt.clus.ext.timeseries.TimeSeries
 
reset() - Method in class si.ijs.kt.clus.algo.split.CurrentBestTestAndHeuristic
 
reset() - Method in class si.ijs.kt.clus.error.Accuracy
 
reset() - Method in class si.ijs.kt.clus.error.AvgDistancesError
 
reset() - Method in class si.ijs.kt.clus.error.ClusSumError
 
reset() - Method in class si.ijs.kt.clus.error.common.ClusError
Operations
reset() - Method in class si.ijs.kt.clus.error.common.ClusErrorList
 
reset() - Method in class si.ijs.kt.clus.error.common.multiscore.MultiScoreStat
 
reset() - Method in class si.ijs.kt.clus.error.common.multiscore.MultiScoreWrapper
 
reset() - Method in class si.ijs.kt.clus.error.hmlc.HierClassWiseAccuracy
 
reset() - Method in class si.ijs.kt.clus.error.hmlc.HierErrorMeasures
 
reset() - Method in class si.ijs.kt.clus.error.hmlc.HierLevelAccuracy
 
reset() - Method in class si.ijs.kt.clus.error.mlc.AveragePrecision
 
reset() - Method in class si.ijs.kt.clus.error.mlc.Coverage
 
reset() - Method in class si.ijs.kt.clus.error.mlc.HammingLoss
 
reset() - Method in class si.ijs.kt.clus.error.mlc.MacroFOne
 
reset() - Method in class si.ijs.kt.clus.error.mlc.MacroPrecision
 
reset() - Method in class si.ijs.kt.clus.error.mlc.MacroRecall
 
reset() - Method in class si.ijs.kt.clus.error.mlc.MicroFOne
 
reset() - Method in class si.ijs.kt.clus.error.mlc.MicroPrecision
 
reset() - Method in class si.ijs.kt.clus.error.mlc.MicroRecall
 
reset() - Method in class si.ijs.kt.clus.error.mlc.MLAccuracy
 
reset() - Method in class si.ijs.kt.clus.error.mlc.MLFOneMeasure
 
reset() - Method in class si.ijs.kt.clus.error.mlc.MLPrecision
 
reset() - Method in class si.ijs.kt.clus.error.mlc.MLRecall
 
reset() - Method in class si.ijs.kt.clus.error.mlc.MLROCAndPRCurve
 
reset() - Method in class si.ijs.kt.clus.error.mlc.OneError
 
reset() - Method in class si.ijs.kt.clus.error.mlc.RankingLoss
 
reset() - Method in class si.ijs.kt.clus.error.mlc.SubsetAccuracy
 
reset() - Method in class si.ijs.kt.clus.error.mlcForHmlc.MlcMeasuresForHmlc
 
reset() - Method in class si.ijs.kt.clus.error.MSError
 
reset() - Method in class si.ijs.kt.clus.error.MSNominalError
 
reset() - Method in class si.ijs.kt.clus.error.PearsonCorrelation
 
reset() - Method in class si.ijs.kt.clus.error.RRMSError
 
reset() - Method in class si.ijs.kt.clus.error.sets.Accuracy
 
reset() - Method in class si.ijs.kt.clus.error.sets.F1Score
 
reset() - Method in class si.ijs.kt.clus.error.sets.HammingLossError
 
reset() - Method in class si.ijs.kt.clus.error.sets.Precision
 
reset() - Method in class si.ijs.kt.clus.error.sets.Recall
 
reset() - Method in class si.ijs.kt.clus.error.sets.SubsetAccuracy
 
reset() - Method in class si.ijs.kt.clus.error.WAHNDError
 
reset() - Method in class si.ijs.kt.clus.ext.beamsearch.ClusBeamSearch
 
reset() - Method in class si.ijs.kt.clus.ext.beamsearch.ClusBeamSimClassStat
 
reset() - Method in class si.ijs.kt.clus.ext.beamsearch.ClusBeamSimRegrStat
 
reset() - Method in class si.ijs.kt.clus.ext.beamsearch.ClusBeamSizeConstraints
 
reset() - Method in class si.ijs.kt.clus.ext.exhaustivesearch.ClusExhaustiveSearch
 
reset() - Method in class si.ijs.kt.clus.ext.ilevelc.ILevelCRandIndex
 
reset() - Method in class si.ijs.kt.clus.ext.optiontree.FindBestTests
 
reset() - Method in class si.ijs.kt.clus.ext.optiontree.TestAndHeuristic
 
reset() - Method in class si.ijs.kt.clus.ext.structuredTypes.SetStatistic
 
reset() - Method in class si.ijs.kt.clus.ext.structuredTypes.TupleStatistic
 
reset() - Method in class si.ijs.kt.clus.ext.timeseries.TimeSeriesStat
 
reset() - Method in class si.ijs.kt.clus.model.io.ClusTreeReader
 
reset() - Method in class si.ijs.kt.clus.statistic.BitVectorStat
 
reset() - Method in class si.ijs.kt.clus.statistic.ClassificationStat
 
reset() - Method in class si.ijs.kt.clus.statistic.ClusStatistic
 
reset() - Method in class si.ijs.kt.clus.statistic.CombStat
 
reset() - Method in class si.ijs.kt.clus.statistic.CombStatClassRegHier
 
reset() - Method in class si.ijs.kt.clus.statistic.GeneticDistanceStat
 
reset() - Method in class si.ijs.kt.clus.statistic.HierSumPairwiseDistancesStat
 
reset() - Method in class si.ijs.kt.clus.statistic.RegressionStat
 
reset() - Method in class si.ijs.kt.clus.statistic.RegressionStatBinaryNomiss
 
reset() - Method in class si.ijs.kt.clus.util.jeans.list.BitList
 
reset() - Method in class si.ijs.kt.clus.util.jeans.math.SingleStat
 
reset() - Method in class si.ijs.kt.clus.util.jeans.math.SingleStatList
 
reset() - Method in class si.ijs.kt.clus.util.jeans.tree.CompleteTreeIterator
 
reset() - Method in class si.ijs.kt.clus.util.jeans.tree.LeafTreeIterator
 
reset() - Method in class si.ijs.kt.clus.util.jeans.tree.TreeIterator
 
reset() - Method in class si.ijs.kt.clus.util.jeans.util.IntervalCollection
 
reset() - Method in class si.ijs.kt.clus.util.jeans.util.list.MyListIter
 
reset(int) - Method in class si.ijs.kt.clus.algo.split.CurrentBestTestAndHeuristic
 
reset(int) - Method in class si.ijs.kt.clus.ext.optiontree.TestAndHeuristic
 
reset(int) - Method in class si.ijs.kt.clus.ext.optxval.OptXValInduce
 
reset(int) - Static method in class si.ijs.kt.clus.util.ClusRandom
 
reset(ClusStatistic[]) - Static method in class si.ijs.kt.clus.statistic.ClusStatistic
 
resetAll() - Method in class si.ijs.kt.clus.main.ClusSummary
 
resetAlternativeBest() - Method in class si.ijs.kt.clus.algo.split.CurrentBestTestAndHeuristic
 
resetBestTest() - Method in class si.ijs.kt.clus.algo.split.CurrentBestTestAndHeuristic
 
resetBestTest() - Method in class si.ijs.kt.clus.ext.optiontree.TestAndHeuristic
 
resetClusOOBErrorEstimate() - Method in class si.ijs.kt.clus.ext.ensemble.ClusEnsembleInduce
Makes new ClusOOBErrorEstimate.
resetExamples() - Method in class si.ijs.kt.clus.data.type.primitive.SparseNumericAttrType
 
resetExtra(int) - Method in class si.ijs.kt.clus.ext.optxval.OptXValIndOV
Deprecated.
 
resetMinMax() - Method in class si.ijs.kt.clus.algo.split.FindBestTest
 
resetSumValues(int) - Method in class si.ijs.kt.clus.statistic.RegressionStat
 
resetSumWeights(int) - Method in class si.ijs.kt.clus.statistic.RegressionStat
 
resetTempFields() - Method in class si.ijs.kt.clus.ext.featureRanking.relief.statistics.Classic
 
resetTempFields() - Method in class si.ijs.kt.clus.ext.featureRanking.relief.statistics.DistanceSimplified
 
resetTempFields() - Method in class si.ijs.kt.clus.ext.featureRanking.relief.statistics.Statistics
 
resetTempFields() - Method in class si.ijs.kt.clus.ext.featureRanking.relief.statistics.Steepness
 
resetTempFields() - Method in class si.ijs.kt.clus.ext.featureRanking.relief.statistics.Variance
 
resetTimes() - Static method in class si.ijs.kt.clus.main.ClusStat
 
resetToSimple(double) - Method in class si.ijs.kt.clus.statistic.ClassificationStat
Resets the SumWeight and majority class count to weight and all other class counts to zero.
resetToSimple(double) - Method in class si.ijs.kt.clus.statistic.ClusStatistic
 
resize(int) - Method in class si.ijs.kt.clus.data.ClusData
 
resize(int) - Method in class si.ijs.kt.clus.data.cols.attribute.ClusAttribute
 
resize(int) - Method in class si.ijs.kt.clus.data.cols.attribute.NominalAttribute
 
resize(int) - Method in class si.ijs.kt.clus.data.cols.attribute.NumericAttribute
 
resize(int) - Method in class si.ijs.kt.clus.data.cols.ColTarget
 
resize(int) - Method in class si.ijs.kt.clus.data.rows.RowData
 
resize(int) - Method in class si.ijs.kt.clus.data.rows.RowDataSortHelper
 
resize(int) - Method in class si.ijs.kt.clus.util.jeans.list.BitList
 
resize(int, String) - Method in class si.ijs.kt.clus.ext.timeseries.TimeSeries
 
resize(ArrayList, int) - Static method in class si.ijs.kt.clus.pruning.SequencePruningVSB
 
resizeEmpty(int) - Method in class si.ijs.kt.clus.data.rows.RowData
 
ResourceInfo - Class in si.ijs.kt.clus.util
 
ResourceInfo() - Constructor for class si.ijs.kt.clus.util.ResourceInfo
 
restoreBestWeight(ArrayList<Double>) - Method in class si.ijs.kt.clus.util.tools.optimization.gd.GDProblem
Restore the weight with minimum fitness.
ResultsCache - Class in si.ijs.kt.clus.addon.sit.mtLearner
This class stores a cache of TargetSets, testdata and the predictions for that testdata TODO: better search in stored results.
ResultsCache() - Constructor for class si.ijs.kt.clus.addon.sit.mtLearner.ResultsCache
 
retrieveStatistics(ArrayList) - Method in class si.ijs.kt.clus.addon.hmc.HMCAverageSingleClass.HMCAverageTreeModel
 
retrieveStatistics(ArrayList) - Method in class si.ijs.kt.clus.algo.kNN.KnnModel
 
retrieveStatistics(ArrayList) - Method in class si.ijs.kt.clus.algo.rules.ClusRule
 
retrieveStatistics(ArrayList) - Method in class si.ijs.kt.clus.algo.rules.ClusRuleSet
 
retrieveStatistics(ArrayList) - Method in class si.ijs.kt.clus.ext.ensemble.ClusForest
 
retrieveStatistics(ArrayList) - Method in class si.ijs.kt.clus.ext.featureRanking.relief.ReliefModel
 
retrieveStatistics(ArrayList) - Method in class si.ijs.kt.clus.ext.optiontree.ClusOptionNode
 
retrieveStatistics(ArrayList) - Method in class si.ijs.kt.clus.ext.optiontree.ClusSplitNode
 
retrieveStatistics(ArrayList<ClusStatistic>) - Method in class si.ijs.kt.clus.algo.tdidt.ClusNode
 
retrieveStatistics(ArrayList<ClusStatistic>) - Method in interface si.ijs.kt.clus.model.ClusModel
 
returnImplicitLinearTermsIfNeeded(RowData) - Static method in class si.ijs.kt.clus.algo.rules.ClusRuleLinearTerm
Returns implicit linear terms if this is set in the settings file.
returnNNs(DataTuple, int) - Method in class si.ijs.kt.clus.algo.kNN.methods.bfMethod.BruteForce
 
returnNNs(DataTuple, int) - Method in class si.ijs.kt.clus.algo.kNN.methods.bfMethod.OracleBruteForce
 
returnNNs(DataTuple, int) - Method in class si.ijs.kt.clus.algo.kNN.methods.kdTree.KDTree
Return nearest k (getK()) tuples to specified tuple.
returnNNs(DataTuple, int) - Method in class si.ijs.kt.clus.algo.kNN.methods.SearchAlgorithm
Returns k nearest neighbors.
returnNNs(DataTuple, int) - Method in class si.ijs.kt.clus.algo.kNN.methods.vpTree.VPTree
 
returnNormalizedData(RowData) - Static method in class si.ijs.kt.clus.Clus
Normalize the data so that most of the variables are within [-0.5,0.5] range.
returnPureNNs(DataTuple, int) - Method in class si.ijs.kt.clus.algo.kNN.methods.bfMethod.BruteForce
 
returnPureStack() - Method in class si.ijs.kt.clus.algo.kNN.methods.NNStack
 
returnRuleInduceParams() - Method in class si.ijs.kt.clus.main.settings.section.SettingsRules
For TreesToRules induction return the original parameters after forest induced
returnStack() - Method in class si.ijs.kt.clus.algo.kNN.methods.NNStack
Returns k nearest neighbors among those added to stack.
reweighCovered(RowData) - Method in class si.ijs.kt.clus.algo.rules.ClusRule
Re-weighs examples covered by this rule.
RFeatSelection - Enum constant in enum class si.ijs.kt.clus.main.settings.section.SettingsEnsemble.EnsembleMethod
 
RForest - Enum constant in enum class si.ijs.kt.clus.main.settings.section.SettingsEnsemble.EnsembleMethod
 
RForest - Enum constant in enum class si.ijs.kt.clus.main.settings.section.SettingsEnsemble.EnsembleRanking
 
RForestProximities - Class in si.ijs.kt.clus.ext.semisupervised.confidence.regression
Class which determines reliability score of an unlabeled example e_u as follows: r(e_u) = sum_{e_l} w_l * oobError(e_l), where w_l is random forest proximity of e_u to labeled example e_l, and oonError return out-of-bag error of labeled example e_u.
RForestProximities - Enum constant in enum class si.ijs.kt.clus.main.settings.section.SettingsSSL.SSLConfidenceMeasure
RForestProximities - extrapolation of error of unlabeled examples via OOB error of labeled examples in their Random Forest proximity
RForestProximities(ClusStatManager, SettingsSSL.SSLNormalization, SettingsSSL.SSLAggregation) - Constructor for class si.ijs.kt.clus.ext.semisupervised.confidence.regression.RForestProximities
 
RForestProximitiesV2 - Enum constant in enum class si.ijs.kt.clus.main.settings.section.SettingsSSL.SSLConfidenceMeasure
RForestProximitiesV2 - ??
RIGHT_HIGH - Static variable in class si.ijs.kt.clus.algo.kNN.methods.vpTree.VPNode
 
RIGHT_LOW - Static variable in class si.ijs.kt.clus.algo.kNN.methods.vpTree.VPNode
 
RMSError - Class in si.ijs.kt.clus.error
 
RMSError(ClusErrorList, NumericAttrType[]) - Constructor for class si.ijs.kt.clus.error.RMSError
 
RMSError(ClusErrorList, NumericAttrType[], String) - Constructor for class si.ijs.kt.clus.error.RMSError
 
RMSError(ClusErrorList, NumericAttrType[], ClusAttributeWeights) - Constructor for class si.ijs.kt.clus.error.RMSError
 
RMSError(ClusErrorList, NumericAttrType[], ClusAttributeWeights, boolean) - Constructor for class si.ijs.kt.clus.error.RMSError
 
RMSError(ClusErrorList, NumericAttrType[], ClusAttributeWeights, boolean, String) - Constructor for class si.ijs.kt.clus.error.RMSError
 
RMSError(ClusErrorList, NumericAttrType[], ClusAttributeWeights, String) - Constructor for class si.ijs.kt.clus.error.RMSError
 
ROCAndPRCurve - Class in si.ijs.kt.clus.error
 
ROCAndPRCurve(BinaryPredictionList) - Constructor for class si.ijs.kt.clus.error.ROCAndPRCurve
 
round(double) - Method in class si.ijs.kt.clus.statistic.WHTDStatistic
 
roundDouble(double, int) - Static method in class si.ijs.kt.clus.util.ClusUtil
 
roundDouble(double, int) - Static method in class si.ijs.kt.clus.util.jeans.util.StringUtils
 
roundPredictions() - Method in class si.ijs.kt.clus.ext.ensemble.ClusEnsembleInduceOptClassification
 
roundPredictions() - Method in class si.ijs.kt.clus.ext.ensemble.ClusEnsembleInduceOptimization
 
roundPredictions() - Method in class si.ijs.kt.clus.ext.ensemble.ClusEnsembleInduceOptRegHMLC
 
roundToSignificantFigures(double, int) - Static method in class si.ijs.kt.clus.util.ClusUtil
 
RowData - Class in si.ijs.kt.clus.data.rows
Multiple rows (tuples) of data.
RowData(Object[], int) - Constructor for class si.ijs.kt.clus.data.rows.RowData
 
RowData(ArrayList, ClusSchema) - Constructor for class si.ijs.kt.clus.data.rows.RowData
 
RowData(ArrayList, ClusSchema, boolean) - Constructor for class si.ijs.kt.clus.data.rows.RowData
 
RowData(ClusSchema) - Constructor for class si.ijs.kt.clus.data.rows.RowData
 
RowData(ClusSchema, int) - Constructor for class si.ijs.kt.clus.data.rows.RowData
 
RowData(RowData) - Constructor for class si.ijs.kt.clus.data.rows.RowData
 
RowDataSortHelper - Class in si.ijs.kt.clus.data.rows
 
RowDataSortHelper() - Constructor for class si.ijs.kt.clus.data.rows.RowDataSortHelper
 
ROWS - Static variable in class si.ijs.kt.clus.data.ClusSchema
 
RRMSE - Enum constant in enum class si.ijs.kt.clus.main.settings.section.SettingsRules.OptimizationLossFunction
Optimization Loss function type.
RRMSError - Class in si.ijs.kt.clus.error
Relative root mean squared error.
RRMSError(ClusErrorList, NumericAttrType[]) - Constructor for class si.ijs.kt.clus.error.RRMSError
 
RRMSError(ClusErrorList, NumericAttrType[], ClusAttributeWeights) - Constructor for class si.ijs.kt.clus.error.RRMSError
 
RRMSError(ClusErrorList, NumericAttrType[], ClusAttributeWeights, boolean) - Constructor for class si.ijs.kt.clus.error.RRMSError
 
RSubspaces - Enum constant in enum class si.ijs.kt.clus.main.settings.section.SettingsEnsemble.EnsembleMethod
 
RuleNormalization - Class in si.ijs.kt.clus.algo.rules
Information about rule normalization.
RuleNormalization() - Constructor for class si.ijs.kt.clus.algo.rules.RuleNormalization
 
RulePred(int, int) - Constructor for class si.ijs.kt.clus.util.tools.optimization.OptimizationProblem.RulePred
An empty class
RULES - Static variable in interface si.ijs.kt.clus.model.ClusModel
 
rulesFromTree() - Method in class si.ijs.kt.clus.main.settings.section.SettingsTree
If we transform the induced trees to rules.
RulesFromTree - Enum constant in enum class si.ijs.kt.clus.main.settings.section.SettingsRules.CoveringMethod
No covering, rules transcribed from tree
run(String[]) - Method in class si.ijs.kt.clus.addon.hmc.ClusAmandaRules.ClusAmandaRules
 
run(String[]) - Method in class si.ijs.kt.clus.addon.hmc.HMCAverageSingleClass.HMCAverageSingleClass
 
run(String[]) - Method in class si.ijs.kt.clus.addon.hmc.HMCNodeWiseModels.hmcnwmodels.HMCNodeWiseModels
 

S

S_EQ - Static variable in class si.ijs.kt.clus.model.test.NodeTest
 
safePrune() - Method in class si.ijs.kt.clus.algo.tdidt.ClusNode
 
samePrediction(ClusNode) - Method in class si.ijs.kt.clus.algo.tdidt.ClusNode
Code for safe package si.ijs.kt.clus.pruning the tree
samePrediction(ClusStatistic) - Method in class si.ijs.kt.clus.error.common.multiscore.MultiScoreStat
 
samePrediction(ClusStatistic) - Method in class si.ijs.kt.clus.ext.timeseries.TimeSeriesStat
 
samePrediction(ClusStatistic) - Method in class si.ijs.kt.clus.statistic.ClassificationStat
 
samePrediction(ClusStatistic) - Method in class si.ijs.kt.clus.statistic.ClusStatistic
 
samePrediction(ClusStatistic) - Method in class si.ijs.kt.clus.statistic.CombStat
 
samePrediction(ClusStatistic) - Method in class si.ijs.kt.clus.statistic.CombStatClassRegHier
 
samePrediction(ClusStatistic) - Method in class si.ijs.kt.clus.statistic.RegressionStat
 
samePrediction(ClusStatistic) - Method in class si.ijs.kt.clus.statistic.WHTDStatistic
 
sample(int, ClusRandomNonstatic) - Method in class si.ijs.kt.clus.data.rows.RowData
Create a random sample with replacement of this RowData.
sample(String) - Method in class si.ijs.kt.clus.Clus
 
SampledRuleSet - Enum constant in enum class si.ijs.kt.clus.main.settings.section.SettingsRules.CoveringMethod
No covering, rules created with PCT enemble, converted to rules and then sampled
sampleWeighted(Random) - Method in class si.ijs.kt.clus.data.rows.RowData
 
sampleWeighted(Random, int) - Method in class si.ijs.kt.clus.data.rows.RowData
 
Sampling_K_Random(int, int) - Static method in class si.ijs.kt.clus.statistic.SumPairwiseDistancesStat
 
sanityCheck(double, ClusRule) - Method in class si.ijs.kt.clus.algo.rules.ClusRuleConstraintInduce
 
sanityCheck(double, ClusRule) - Method in class si.ijs.kt.clus.algo.rules.ClusRuleInduce
 
sanityCheck(double, ClusNode) - Method in class si.ijs.kt.clus.ext.beamsearch.ClusBeamSearch
 
sanityCheck(double, ClusNode) - Method in class si.ijs.kt.clus.ext.exhaustivesearch.ClusExhaustiveSearch
 
save() - Method in class si.ijs.kt.clus.addon.ILevelC.ilevelc.ILevelCGUI.ILevelCComponent
 
save(PrintWriter) - Method in class si.ijs.kt.clus.util.jeans.io.ini.INIFile
 
save(PrintWriter) - Method in class si.ijs.kt.clus.util.jeans.io.ini.INIFileEntry
 
save(PrintWriter) - Method in class si.ijs.kt.clus.util.jeans.io.ini.INIFileNode
 
save(PrintWriter) - Method in class si.ijs.kt.clus.util.jeans.io.ini.INIFileSection
 
save(PrintWriter) - Method in class si.ijs.kt.clus.util.jeans.io.ini.INIFileSectionGroup
 
save(String) - Method in class si.ijs.kt.clus.model.io.ClusModelCollectionIO
 
save(String) - Method in class si.ijs.kt.clus.util.jeans.io.ini.INIFile
 
save(String, PrintWriter) - Method in class si.ijs.kt.clus.util.jeans.io.ini.INIFileSection
 
saveBeamStats() - Method in class si.ijs.kt.clus.ext.beamsearch.ClusBeamSearch
 
saveBeamStats() - Method in class si.ijs.kt.clus.ext.exhaustivesearch.ClusExhaustiveSearch
 
saveHierarchy(String, ClassHierarchy) - Method in class si.ijs.kt.clus.ext.hierarchical.ClassHierarchyIO
 
saveInformation(String) - Method in class si.ijs.kt.clus.algo.ClusInductionAlgorithmType
 
saveInformation(String) - Method in class si.ijs.kt.clus.algo.tdidt.tune.CDTuneSizeConstrPruning
 
SaveListener() - Constructor for class si.ijs.kt.clus.addon.ILevelC.ilevelc.ILevelCGUI.SaveListener
 
SaveLoadNeighbours - Class in si.ijs.kt.clus.ext.featureRanking.relief.nearestNeighbour
 
SaveLoadNeighbours(String[], String) - Constructor for class si.ijs.kt.clus.ext.featureRanking.relief.nearestNeighbour.SaveLoadNeighbours
 
saveModels(ClusRun, ClusModelCollectionIO) - Method in class si.ijs.kt.clus.Clus
 
saveNeighboursToFile(HashMap<Integer, HashMap<Integer, NearestNeighbour[][]>>) - Method in class si.ijs.kt.clus.ext.featureRanking.relief.nearestNeighbour.SaveLoadNeighbours
 
saveToFile(AttributeWeighting, String) - Static method in class si.ijs.kt.clus.algo.kNN.distance.attributeWeighting.AttributeWeighting
 
search - Variable in class si.ijs.kt.clus.algo.kNN.distance.distanceWeighting.DistanceWeighting
Search algorithm used; contains distance used
search() - Method in class si.ijs.kt.clus.addon.sit.Sit
Start the search for the optimal subset using the current learner and search algorithm
search(ClusAttrType, TargetSet) - Method in class si.ijs.kt.clus.addon.sit.searchAlgorithm.AllTargets
This class will always return the full target candidates set.
search(ClusAttrType, TargetSet) - Method in class si.ijs.kt.clus.addon.sit.searchAlgorithm.GeneticSearch
 
search(ClusAttrType, TargetSet) - Method in class si.ijs.kt.clus.addon.sit.searchAlgorithm.GreedySIT
 
search(ClusAttrType, TargetSet) - Method in class si.ijs.kt.clus.addon.sit.searchAlgorithm.NoStopSearch
 
search(ClusAttrType, TargetSet) - Method in class si.ijs.kt.clus.addon.sit.searchAlgorithm.OneTarget
 
search(ClusAttrType, TargetSet) - Method in interface si.ijs.kt.clus.addon.sit.searchAlgorithm.SearchAlgorithm
 
search(ClusAttrType, TargetSet) - Method in class si.ijs.kt.clus.addon.sit.searchAlgorithm.TC
 
SearchAlgorithm - Class in si.ijs.kt.clus.algo.kNN.methods
 
SearchAlgorithm - Interface in si.ijs.kt.clus.addon.sit.searchAlgorithm
 
SearchAlgorithm(ClusRun, SearchDistance) - Constructor for class si.ijs.kt.clus.algo.kNN.methods.SearchAlgorithm
 
SearchAlgorithmImpl - Class in si.ijs.kt.clus.addon.sit.searchAlgorithm
Abstract implementation of the SearchAlgo interface.
SearchAlgorithmImpl() - Constructor for class si.ijs.kt.clus.addon.sit.searchAlgorithm.SearchAlgorithmImpl
 
SearchDistance - Class in si.ijs.kt.clus.distance.primitive
 
SearchDistance() - Constructor for class si.ijs.kt.clus.distance.primitive.SearchDistance
 
select(int) - Method in class si.ijs.kt.clus.selection.BitMapSelection
 
select(ClusSelection) - Method in class si.ijs.kt.clus.data.ClusData
 
select(ClusSelection) - Method in class si.ijs.kt.clus.data.rows.RowData
 
select(ClusSelection, int) - Method in class si.ijs.kt.clus.data.cols.attribute.ClusAttribute
 
select(ClusSelection, int) - Method in class si.ijs.kt.clus.data.cols.attribute.NominalAttribute
 
select(ClusSelection, int) - Method in class si.ijs.kt.clus.data.cols.attribute.NumericAttribute
 
select(ClusSelection, int) - Method in class si.ijs.kt.clus.data.cols.ColTarget
 
selectFrom(ClusSelection, ClusRandomNonstatic) - Method in class si.ijs.kt.clus.data.ClusData
 
selectFrom(ClusSelection, ClusRandomNonstatic) - Method in class si.ijs.kt.clus.data.rows.RowData
 
selectMultiple() - Method in class si.ijs.kt.clus.ext.optiontree.FindBestTests
 
selectNominal(ClusSelection, int) - Method in class si.ijs.kt.clus.data.cols.ColTarget
 
selectNumeric(ClusSelection, int) - Method in class si.ijs.kt.clus.data.cols.ColTarget
 
selectRandomSubspaces(ClusAttrType[], int, int, ClusRandomNonstatic) - Static method in class si.ijs.kt.clus.ext.ensemble.ClusEnsembleInduce
Selects random subspaces.
SelfTraining - Enum constant in enum class si.ijs.kt.clus.main.settings.section.SettingsSSL.SSLMethod
 
SelfTrainingFTF - Enum constant in enum class si.ijs.kt.clus.main.settings.section.SettingsSSL.SSLMethod
 
SemiSupervised - Enum constant in enum class si.ijs.kt.clus.main.settings.section.SettingsTree.Heuristic
 
SemiSupMinLabeledWeightStopCrit - Class in si.ijs.kt.clus.ext.semisupervised
 
SemiSupMinLabeledWeightStopCrit(double) - Constructor for class si.ijs.kt.clus.ext.semisupervised.SemiSupMinLabeledWeightStopCrit
 
separateAndConquor(ClusRuleSet, RowData) - Method in class si.ijs.kt.clus.algo.rules.ClusRuleConstraintInduce
 
separateAndConquor(ClusRuleSet, RowData) - Method in class si.ijs.kt.clus.algo.rules.ClusRuleInduce
Standard covering algorithm for learning ordered rules.
separateAndConquorAddRulesIfBetter(ClusRuleSet, RowData) - Method in class si.ijs.kt.clus.algo.rules.ClusRuleInduce
Modified separateAndConquorWeighted method: Adds a rule to the rule set only if it improves the rule set performance
separateAndConquorAddRulesIfBetterFromBeam(ClusRuleSet, RowData) - Method in class si.ijs.kt.clus.algo.rules.ClusRuleInduce
Modified separateAndConquorWeighted method: Adds a rule to the rule set only if it improves the rule set performance or if they cover default class.
separateAndConquorAddRulesIfBetterFromBeam2(ClusRuleSet, RowData) - Method in class si.ijs.kt.clus.algo.rules.ClusRuleInduce
Modified separateAndConquorWeighted method: evaluates each rule in the context of a complete rule set, it builds the default rule first.
separateAndConquorBootstraped(ClusRuleSet, RowData) - Method in class si.ijs.kt.clus.algo.rules.ClusRuleInduce
separateAndConquor method that induces rules on several bootstrapped data subsets
separateAndConquorRandomly(ClusRuleSet, RowData) - Method in class si.ijs.kt.clus.algo.rules.ClusRuleInduce
Evaluates each rule in the context of a complete rule set.
separateAndConquorWeighted(ClusRuleSet, RowData) - Method in class si.ijs.kt.clus.algo.rules.ClusRuleConstraintInduce
separateAndConquor method which uses re-weighting
separateAndConquorWeighted(ClusRuleSet, RowData) - Method in class si.ijs.kt.clus.algo.rules.ClusRuleInduce
Weighted covering algorithm for learning unordered rules.
separateAndConquorWithHeuristic(ClusRuleSet, RowData) - Method in class si.ijs.kt.clus.algo.rules.ClusRuleInduce
 
septype - Variable in class si.ijs.kt.clus.util.jeans.util.MStreamTokenizer
 
sequenceInitialize(ClusNode) - Method in class si.ijs.kt.clus.pruning.CartPruning
 
sequenceInitialize(ClusNode) - Method in class si.ijs.kt.clus.pruning.PruneTree
 
sequenceInitialize(ClusNode) - Method in class si.ijs.kt.clus.pruning.SizeConstraintPruning
 
sequenceNext() - Method in class si.ijs.kt.clus.pruning.CartPruning
 
sequenceNext() - Method in class si.ijs.kt.clus.pruning.PruneTree
 
sequenceNext() - Method in class si.ijs.kt.clus.pruning.SizeConstraintPruning
 
SequencePruningVSB - Class in si.ijs.kt.clus.pruning
 
SequencePruningVSB(RowData, ClusAttributeWeights) - Constructor for class si.ijs.kt.clus.pruning.SequencePruningVSB
 
sequenceReset() - Method in class si.ijs.kt.clus.pruning.CartPruning
 
sequenceReset() - Method in class si.ijs.kt.clus.pruning.PruneTree
 
sequenceReset() - Method in class si.ijs.kt.clus.pruning.SizeConstraintPruning
 
sequenceToElemK(ClusNode, int) - Method in class si.ijs.kt.clus.pruning.CartPruning
 
sequenceToElemK(ClusNode, int) - Method in class si.ijs.kt.clus.pruning.PruneTree
 
sequenceToElemK(ClusNode, int) - Method in class si.ijs.kt.clus.pruning.SizeConstraintPruning
 
SERIAL_VERSION_ID - Static variable in class si.ijs.kt.clus.main.settings.Settings
 
serialVersionUID - Static variable in class si.ijs.kt.clus.addon.hmc.ClusAmandaRules.AmandaRule
 
serialVersionUID - Static variable in class si.ijs.kt.clus.addon.ILevelC.ilevelc.ILevelCGUI.ILevelCComponent
 
serialVersionUID - Static variable in class si.ijs.kt.clus.addon.ILevelC.ilevelc.ILevelCGUI
 
serialVersionUID - Static variable in class si.ijs.kt.clus.algo.rules.ClusRule
 
serialVersionUID - Static variable in class si.ijs.kt.clus.algo.rules.ClusRuleLinearTerm
 
serialVersionUID - Static variable in class si.ijs.kt.clus.algo.rules.ClusRuleSet
 
serialVersionUID - Static variable in class si.ijs.kt.clus.algo.tdidt.ClusNode
 
serialVersionUID - Static variable in class si.ijs.kt.clus.data.attweights.ClusAttributeWeights
 
serialVersionUID - Static variable in class si.ijs.kt.clus.data.attweights.ClusNormalizedAttributeWeights
 
serialVersionUID - Static variable in class si.ijs.kt.clus.data.ClusSchema
 
serialVersionUID - Static variable in class si.ijs.kt.clus.data.rows.DataTuple
 
serialVersionUID - Static variable in class si.ijs.kt.clus.data.rows.SparseDataTuple
 
serialVersionUID - Static variable in class si.ijs.kt.clus.data.type.BitwiseNominalAttrType
 
serialVersionUID - Static variable in class si.ijs.kt.clus.data.type.ClusAttrType
 
serialVersionUID - Static variable in class si.ijs.kt.clus.data.type.complex.SetAttrType
 
serialVersionUID - Static variable in class si.ijs.kt.clus.data.type.complex.TupleAttrType
 
serialVersionUID - Static variable in class si.ijs.kt.clus.data.type.hierarchies.ClassesAttrType
 
serialVersionUID - Static variable in class si.ijs.kt.clus.data.type.hierarchies.ClassesAttrTypeSingleLabel
 
serialVersionUID - Static variable in class si.ijs.kt.clus.data.type.hierarchies.FlatClassesAttrType
 
serialVersionUID - Static variable in class si.ijs.kt.clus.data.type.primitive.IndexAttrType
 
serialVersionUID - Static variable in class si.ijs.kt.clus.data.type.primitive.IntegerAttrType
 
serialVersionUID - Static variable in class si.ijs.kt.clus.data.type.primitive.NominalAttrType
 
serialVersionUID - Static variable in class si.ijs.kt.clus.data.type.primitive.NumericAttrType
 
serialVersionUID - Static variable in class si.ijs.kt.clus.data.type.primitive.SparseNumericAttrType
 
serialVersionUID - Static variable in class si.ijs.kt.clus.data.type.primitive.StringAttrType
 
serialVersionUID - Static variable in class si.ijs.kt.clus.data.type.primitive.TimeSeriesAttrType
 
serialVersionUID - Static variable in class si.ijs.kt.clus.distance.ClusDistance
 
serialVersionUID - Static variable in class si.ijs.kt.clus.distance.complex.ClusStructuredDistance
 
serialVersionUID - Static variable in class si.ijs.kt.clus.distance.complex.SetDistance
 
serialVersionUID - Static variable in class si.ijs.kt.clus.distance.complex.TupleDistance
 
serialVersionUID - Static variable in class si.ijs.kt.clus.distance.complex.tuples.SSPDMatrix
 
serialVersionUID - Static variable in class si.ijs.kt.clus.distance.hierarchies.HierJaccardDistance
 
serialVersionUID - Static variable in class si.ijs.kt.clus.distance.primitive.timeseries.DTWTimeSeriesDist
 
serialVersionUID - Static variable in class si.ijs.kt.clus.distance.primitive.timeseries.QDMTimeSeriesDist
 
serialVersionUID - Static variable in class si.ijs.kt.clus.distance.primitive.timeseries.TimeSeriesDist
 
serialVersionUID - Static variable in class si.ijs.kt.clus.distance.primitive.timeseries.TSCTimeSeriesDist
 
serialVersionUID - Static variable in class si.ijs.kt.clus.error.AbsoluteError
 
serialVersionUID - Static variable in class si.ijs.kt.clus.error.Accuracy
 
serialVersionUID - Static variable in class si.ijs.kt.clus.error.AvgDistancesError
 
serialVersionUID - Static variable in class si.ijs.kt.clus.error.BinaryPredictionList
 
serialVersionUID - Static variable in class si.ijs.kt.clus.error.ClusSumError
 
serialVersionUID - Static variable in class si.ijs.kt.clus.error.common.ClusError
 
serialVersionUID - Static variable in class si.ijs.kt.clus.error.common.ClusErrorList
 
serialVersionUID - Static variable in class si.ijs.kt.clus.error.common.multiscore.MultiScoreStat
 
serialVersionUID - Static variable in class si.ijs.kt.clus.error.common.multiscore.MultiScoreWrapper
 
serialVersionUID - Static variable in class si.ijs.kt.clus.error.ContingencyTable
 
serialVersionUID - Static variable in class si.ijs.kt.clus.error.hmlc.HierClassWiseAccuracy
 
serialVersionUID - Static variable in class si.ijs.kt.clus.error.hmlc.HierErrorMeasures
 
serialVersionUID - Static variable in class si.ijs.kt.clus.error.hmlc.HierLevelAccuracy
 
serialVersionUID - Static variable in class si.ijs.kt.clus.error.hmlc.HierRMSError
 
serialVersionUID - Static variable in class si.ijs.kt.clus.error.ICVPairwiseDistancesError
 
serialVersionUID - Static variable in class si.ijs.kt.clus.error.MisclassificationError
 
serialVersionUID - Static variable in class si.ijs.kt.clus.error.mlc.AveragePrecision
 
serialVersionUID - Static variable in class si.ijs.kt.clus.error.mlc.Coverage
 
serialVersionUID - Static variable in class si.ijs.kt.clus.error.mlc.HammingLoss
 
serialVersionUID - Static variable in class si.ijs.kt.clus.error.mlc.MacroFOne
 
serialVersionUID - Static variable in class si.ijs.kt.clus.error.mlc.MacroPrecision
 
serialVersionUID - Static variable in class si.ijs.kt.clus.error.mlc.MacroRecall
 
serialVersionUID - Static variable in class si.ijs.kt.clus.error.mlc.MicroFOne
 
serialVersionUID - Static variable in class si.ijs.kt.clus.error.mlc.MicroPrecision
 
serialVersionUID - Static variable in class si.ijs.kt.clus.error.mlc.MicroRecall
 
serialVersionUID - Static variable in class si.ijs.kt.clus.error.mlc.MLAccuracy
 
serialVersionUID - Static variable in class si.ijs.kt.clus.error.mlc.MLFOneMeasure
 
serialVersionUID - Static variable in class si.ijs.kt.clus.error.mlc.MLPrecision
 
serialVersionUID - Static variable in class si.ijs.kt.clus.error.mlc.MLRecall
 
serialVersionUID - Static variable in class si.ijs.kt.clus.error.mlc.MLROCAndPRCurve
 
serialVersionUID - Static variable in class si.ijs.kt.clus.error.mlc.OneError
 
serialVersionUID - Static variable in class si.ijs.kt.clus.error.mlc.RankingLoss
 
serialVersionUID - Static variable in class si.ijs.kt.clus.error.mlc.SubsetAccuracy
 
serialVersionUID - Static variable in class si.ijs.kt.clus.error.mlcForHmlc.MlcMeasuresForHmlc
 
serialVersionUID - Static variable in class si.ijs.kt.clus.error.MSError
 
serialVersionUID - Static variable in class si.ijs.kt.clus.error.MSNominalError
 
serialVersionUID - Static variable in class si.ijs.kt.clus.error.NominalCorrelation
 
serialVersionUID - Static variable in class si.ijs.kt.clus.error.PearsonCorrelation
 
serialVersionUID - Static variable in class si.ijs.kt.clus.error.RMSError
 
serialVersionUID - Static variable in class si.ijs.kt.clus.error.ROCAndPRCurve
 
serialVersionUID - Static variable in class si.ijs.kt.clus.error.RRMSError
 
serialVersionUID - Static variable in class si.ijs.kt.clus.error.sets.Accuracy
 
serialVersionUID - Static variable in class si.ijs.kt.clus.error.sets.F1Score
 
serialVersionUID - Static variable in class si.ijs.kt.clus.error.sets.HammingLossError
 
serialVersionUID - Static variable in class si.ijs.kt.clus.error.sets.Precision
 
serialVersionUID - Static variable in class si.ijs.kt.clus.error.sets.Recall
 
serialVersionUID - Static variable in class si.ijs.kt.clus.error.sets.SubsetAccuracy
 
serialVersionUID - Static variable in class si.ijs.kt.clus.error.WAHNDError
 
serialVersionUID - Static variable in class si.ijs.kt.clus.ext.beamsearch.ClusBeamModel
 
serialVersionUID - Static variable in class si.ijs.kt.clus.ext.beamsearch.ClusBeamSimRegrStat
 
serialVersionUID - Static variable in class si.ijs.kt.clus.ext.hierarchical.ClassesTuple
 
serialVersionUID - Static variable in class si.ijs.kt.clus.ext.hierarchical.ClassesValue
 
serialVersionUID - Static variable in class si.ijs.kt.clus.ext.hierarchical.ClassHierarchy
 
serialVersionUID - Static variable in class si.ijs.kt.clus.ext.hierarchical.ClassTerm
 
serialVersionUID - Static variable in class si.ijs.kt.clus.ext.ilevelc.COPKMeansCluster
 
serialVersionUID - Static variable in class si.ijs.kt.clus.ext.ilevelc.COPKMeansModel
 
serialVersionUID - Static variable in class si.ijs.kt.clus.ext.ilevelc.ILevelCHeurStat
 
serialVersionUID - Static variable in class si.ijs.kt.clus.ext.ilevelc.ILevelCRandIndex
 
serialVersionUID - Static variable in class si.ijs.kt.clus.ext.ilevelc.ILevelCStatistic
 
serialVersionUID - Static variable in class si.ijs.kt.clus.ext.ilevelc.SimpleClusterModel
 
serialVersionUID - Static variable in class si.ijs.kt.clus.ext.optiontree.ClusOptionNode
 
serialVersionUID - Static variable in class si.ijs.kt.clus.ext.optiontree.ClusSplitNode
 
serialVersionUID - Static variable in class si.ijs.kt.clus.ext.optiontree.MyNode
 
serialVersionUID - Static variable in class si.ijs.kt.clus.ext.optxval.OptXValBinTree
 
serialVersionUID - Static variable in class si.ijs.kt.clus.ext.optxval.OptXValNode
 
serialVersionUID - Static variable in class si.ijs.kt.clus.ext.optxval.OptXValSplit
 
serialVersionUID - Static variable in class si.ijs.kt.clus.ext.optxval.SoftNumericTest
 
serialVersionUID - Static variable in class si.ijs.kt.clus.ext.structuredTypes.Set
 
serialVersionUID - Static variable in class si.ijs.kt.clus.ext.structuredTypes.SetStatistic
 
serialVersionUID - Static variable in class si.ijs.kt.clus.ext.structuredTypes.Tuple
 
serialVersionUID - Static variable in class si.ijs.kt.clus.ext.structuredTypes.TupleStatistic
 
serialVersionUID - Static variable in class si.ijs.kt.clus.ext.timeseries.TimeSeries
 
serialVersionUID - Static variable in class si.ijs.kt.clus.ext.timeseries.TimeSeriesSignificantChangeTesterXVAL
 
serialVersionUID - Static variable in class si.ijs.kt.clus.ext.timeseries.TimeSeriesStat
 
serialVersionUID - Static variable in class si.ijs.kt.clus.main.ClusRun
 
serialVersionUID - Static variable in class si.ijs.kt.clus.main.ClusStatManager
 
serialVersionUID - Static variable in class si.ijs.kt.clus.main.ClusSummary
 
serialVersionUID - Static variable in class si.ijs.kt.clus.main.settings.Settings
 
serialVersionUID - Static variable in class si.ijs.kt.clus.model.ClusModelInfo
 
serialVersionUID - Static variable in class si.ijs.kt.clus.model.io.ClusModelCollectionIO
 
serialVersionUID - Static variable in class si.ijs.kt.clus.model.processor.ModelProcessorCollection
 
serialVersionUID - Static variable in class si.ijs.kt.clus.model.test.ClusRuleConstraintInduceTest
 
serialVersionUID - Static variable in class si.ijs.kt.clus.model.test.FakeTest
 
serialVersionUID - Static variable in class si.ijs.kt.clus.model.test.InverseNumericTest
 
serialVersionUID - Static variable in class si.ijs.kt.clus.model.test.NominalTest
 
serialVersionUID - Static variable in class si.ijs.kt.clus.model.test.NumericTest
 
serialVersionUID - Static variable in class si.ijs.kt.clus.model.test.SubsetTest
 
serialVersionUID - Static variable in class si.ijs.kt.clus.statistic.BitVectorStat
 
serialVersionUID - Static variable in class si.ijs.kt.clus.statistic.ClassificationStat
 
serialVersionUID - Static variable in class si.ijs.kt.clus.statistic.ClusStatistic
 
serialVersionUID - Static variable in class si.ijs.kt.clus.statistic.CombStat
 
serialVersionUID - Static variable in class si.ijs.kt.clus.statistic.CombStatClassRegHier
 
serialVersionUID - Static variable in class si.ijs.kt.clus.statistic.GeneticDistanceStat
 
serialVersionUID - Static variable in class si.ijs.kt.clus.statistic.GISStat
Deprecated.
 
serialVersionUID - Static variable in class si.ijs.kt.clus.statistic.HierSingleLabelStat
 
serialVersionUID - Static variable in class si.ijs.kt.clus.statistic.HierSumPairwiseDistancesStat
 
serialVersionUID - Static variable in class si.ijs.kt.clus.statistic.RegressionStat
 
serialVersionUID - Static variable in class si.ijs.kt.clus.statistic.RegressionStatBase
 
serialVersionUID - Static variable in class si.ijs.kt.clus.statistic.RegressionStatBinaryNomiss
 
serialVersionUID - Static variable in class si.ijs.kt.clus.statistic.SumPairwiseDistancesStat
 
serialVersionUID - Static variable in class si.ijs.kt.clus.statistic.WHTDStatistic
 
serialVersionUID - Static variable in exception class si.ijs.kt.clus.util.exception.ClusException
 
serialVersionUID - Static variable in class si.ijs.kt.clus.util.jeans.io.ini.INIFile
 
serialVersionUID - Static variable in class si.ijs.kt.clus.util.jeans.io.ini.INIFileArray
 
serialVersionUID - Static variable in class si.ijs.kt.clus.util.jeans.io.ini.INIFileBool
 
serialVersionUID - Static variable in class si.ijs.kt.clus.util.jeans.io.ini.INIFileDouble
 
serialVersionUID - Static variable in class si.ijs.kt.clus.util.jeans.io.ini.INIFileInt
 
serialVersionUID - Static variable in class si.ijs.kt.clus.util.jeans.io.ini.INIFileNominal
 
serialVersionUID - Static variable in class si.ijs.kt.clus.util.jeans.io.ini.INIFileNominalOrDoubleOrVector
 
serialVersionUID - Static variable in class si.ijs.kt.clus.util.jeans.io.ini.INIFileNominalOrIntOrVector
 
serialVersionUID - Static variable in class si.ijs.kt.clus.util.jeans.io.ini.INIFileSection
 
serialVersionUID - Static variable in class si.ijs.kt.clus.util.jeans.io.ini.INIFileSectionGroup
 
serialVersionUID - Static variable in class si.ijs.kt.clus.util.jeans.io.ini.INIFileString
 
serialVersionUID - Static variable in class si.ijs.kt.clus.util.jeans.io.ini.INIFileStringOrDouble
 
serialVersionUID - Static variable in class si.ijs.kt.clus.util.jeans.io.ini.INIFileStringOrInt
 
serialVersionUID - Static variable in class si.ijs.kt.clus.util.jeans.io.range.NominalType
 
serialVersionUID - Static variable in class si.ijs.kt.clus.util.jeans.list.BitList
 
serialVersionUID - Static variable in class si.ijs.kt.clus.util.jeans.tree.MyNode
 
serialVersionUID - Static variable in class si.ijs.kt.clus.util.jeans.util.compound.DoubleBoolean
 
serialVersionUID - Static variable in class si.ijs.kt.clus.util.jeans.util.compound.IndexedItem
 
serialVersionUID - Static variable in exception class si.ijs.kt.clus.util.jeans.util.GeneralException
 
serialVersionUID - Static variable in class si.ijs.kt.clus.util.jeans.util.IntervalCollection
 
serialVersionUID - Static variable in class si.ijs.kt.clus.util.jeans.util.MyArray
 
serialVersionUID - Static variable in class si.ijs.kt.clus.util.tools.textproc.StopList
 
set(double, Object) - Method in class si.ijs.kt.clus.util.jeans.util.compound.DoubleObject
 
set(int, int, double) - Method in class si.ijs.kt.clus.util.jeans.math.matrix.MSymMatrix
 
Set - Class in si.ijs.kt.clus.ext.structuredTypes
 
Set - Enum constant in enum class si.ijs.kt.clus.data.type.ClusAttrType.AttributeType
 
Set(int) - Constructor for class si.ijs.kt.clus.ext.structuredTypes.Set
 
Set(Object[]) - Constructor for class si.ijs.kt.clus.ext.structuredTypes.Set
 
Set(String) - Constructor for class si.ijs.kt.clus.ext.structuredTypes.Set
 
Set(String, String) - Constructor for class si.ijs.kt.clus.ext.structuredTypes.Set
 
Set(Set) - Constructor for class si.ijs.kt.clus.ext.structuredTypes.Set
 
set_itemsetcpt(int) - Static method in class si.ijs.kt.clus.main.Global
 
set_sym(int, int, double) - Method in class si.ijs.kt.clus.util.jeans.math.matrix.MSymMatrix
 
set_treecpt(int) - Static method in class si.ijs.kt.clus.main.Global
 
set1SERule(boolean) - Method in class si.ijs.kt.clus.pruning.SequencePruningVSB
 
set1SERuleEnabled(boolean) - Method in class si.ijs.kt.clus.main.settings.section.SettingsTree
 
setAbundance(double) - Method in class si.ijs.kt.clus.ext.hierarchical.ClassesValue
 
setAdditionalInfo(String) - Method in class si.ijs.kt.clus.error.common.ClusError
 
setAdditiveError(ClusErrorList) - Method in class si.ijs.kt.clus.pruning.SizeConstraintPruning
 
setAggregate(boolean) - Method in class si.ijs.kt.clus.ext.hierarchicalmtr.ClusHMTRNode
 
setAllErrorsClone(ClusErrorList, ClusErrorList, ClusErrorList) - Method in class si.ijs.kt.clus.model.ClusModelInfo
 
setAllIntermediate(boolean) - Method in class si.ijs.kt.clus.ext.hierarchical.ClassesTuple
 
setAllNormalizationWeights(double) - Method in class si.ijs.kt.clus.data.attweights.ClusNormalizedAttributeWeights
 
setAllStatistic(ClusStatistic) - Method in class si.ijs.kt.clus.main.ClusStatManager
 
setAllWeights(double) - Method in class si.ijs.kt.clus.data.attweights.ClusAttributeWeights
 
setAlternatives(ArrayList<NodeTest>) - Method in class si.ijs.kt.clus.algo.tdidt.ClusNode
 
setAlternativesString(String) - Method in class si.ijs.kt.clus.algo.tdidt.ClusNode
 
setAppName(String) - Method in class si.ijs.kt.clus.main.settings.section.SettingsGeneric
 
setArity(int) - Method in class si.ijs.kt.clus.model.test.NodeTest
 
setArrayIndex(int) - Method in class si.ijs.kt.clus.data.type.ClusAttrType
 
setArrayIndexNames(boolean) - Method in class si.ijs.kt.clus.util.jeans.io.ini.INIFileNominalOrDoubleOrVector
 
setArrayIndexNames(String[]) - Method in class si.ijs.kt.clus.util.jeans.io.ini.INIFileNominalOrDoubleOrVector
 
setAttrHeuristic(ClusHeuristic) - Method in class si.ijs.kt.clus.ext.beamsearch.ClusBeamHeuristic
 
setAttribs(ClusAttrType[]) - Method in class si.ijs.kt.clus.algo.kNN.distance.valentin.VectorDistance
 
setAttribtue(ClusAttrType) - Method in class si.ijs.kt.clus.ext.optiontree.TestAndHeuristic
 
setAttributes(ClusAttrType[]) - Method in class si.ijs.kt.clus.heuristic.EncodingCost
 
setAttrType(ClusAttrType, int) - Method in class si.ijs.kt.clus.data.ClusSchema
 
SetAttrType - Class in si.ijs.kt.clus.data.type.complex
 
SetAttrType(String) - Constructor for class si.ijs.kt.clus.data.type.complex.SetAttrType
 
SetAttrType(String, String) - Constructor for class si.ijs.kt.clus.data.type.complex.SetAttrType
 
SetAttrType(String, String, int) - Constructor for class si.ijs.kt.clus.data.type.complex.SetAttrType
 
SetAttrType.MySerializable - Class in si.ijs.kt.clus.data.type.complex
 
setAvgIter(int) - Method in class si.ijs.kt.clus.ext.ilevelc.COPKMeansModel
 
setBagSelection(int) - Method in class si.ijs.kt.clus.main.settings.section.SettingsEnsemble
 
setBasicDistance(BasicDistance) - Method in class si.ijs.kt.clus.data.type.ClusAttrType
Sets the BasicDistance for this AttributeType
setBeam(ClusBeam) - Method in class si.ijs.kt.clus.ext.beamsearch.ClusBeamSearch
 
setBeam(ClusBeam) - Method in class si.ijs.kt.clus.ext.beamsearch.ClusBeamSimClassStat
 
setBeam(ClusBeam) - Method in class si.ijs.kt.clus.ext.beamsearch.ClusBeamSimRegrStat
 
setBeam(ClusBeam) - Method in class si.ijs.kt.clus.ext.exhaustivesearch.ClusExhaustiveSearch
 
setBeam(ClusBeam) - Method in class si.ijs.kt.clus.statistic.ClusStatistic
 
setBeamChanged(boolean) - Method in class si.ijs.kt.clus.algo.rules.ClusRuleConstraintInduce
 
setBeamChanged(boolean) - Method in class si.ijs.kt.clus.algo.rules.ClusRuleInduce
 
setBeamChanged(boolean) - Method in class si.ijs.kt.clus.ext.beamsearch.ClusBeamSearch
 
setBeamChanged(boolean) - Method in class si.ijs.kt.clus.ext.exhaustivesearch.ClusExhaustiveSearch
 
setBeamSearch(boolean) - Method in class si.ijs.kt.clus.main.ClusStatManager
 
setBeamSimilarity(double) - Method in class si.ijs.kt.clus.ext.beamsearch.ClusBeam
 
setBestHeur(double) - Method in class si.ijs.kt.clus.algo.split.CurrentBestTestAndHeuristic
 
setBestHeur(double) - Method in class si.ijs.kt.clus.ext.optiontree.TestAndHeuristic
 
setBestTest(int, NodeTest) - Method in class si.ijs.kt.clus.ext.beamsearch.ClusBeamAttrSelector
 
setBit(int) - Method in class si.ijs.kt.clus.util.jeans.list.BitList
 
setBitPosition(int) - Method in class si.ijs.kt.clus.data.type.BitwiseNominalAttrType
 
setBlockChars(String, String) - Method in class si.ijs.kt.clus.util.jeans.util.MStringTokenizer
 
setBound(double) - Method in class si.ijs.kt.clus.model.test.ClusRuleConstraintInduceTest
 
setBound(double) - Method in class si.ijs.kt.clus.model.test.NumericTest
 
setCalcItotal(double) - Method in class si.ijs.kt.clus.statistic.ClassificationStat
 
setCalcItotal(double) - Method in class si.ijs.kt.clus.statistic.RegressionStat
 
setCapacity(int) - Method in class si.ijs.kt.clus.util.jeans.util.array.MyIntArray
 
setCapacity(int) - Method in class si.ijs.kt.clus.util.jeans.util.MyArray
 
setCargo(Object) - Method in class si.ijs.kt.clus.util.jeans.tree.BinaryNode
 
setCharTokens(String) - Method in class si.ijs.kt.clus.util.jeans.util.MStreamTokenizer
 
setCharTokens(String) - Method in class si.ijs.kt.clus.util.jeans.util.MStringTokenizer
 
setCharTokens(String) - Method in class si.ijs.kt.clus.util.jeans.util.MTokenizer
 
setChild(int, MyNode) - Method in class si.ijs.kt.clus.ext.optiontree.MyNode
 
setChild(MyNode, int) - Method in class si.ijs.kt.clus.ext.optiontree.MyNode
 
setChild(Node, int) - Method in class si.ijs.kt.clus.util.jeans.tree.MyNode
 
setChosenIntancesTrain(int[]) - Method in class si.ijs.kt.clus.main.settings.section.SettingsKNN
 
setClassTerm(ClassTerm) - Method in class si.ijs.kt.clus.ext.hierarchical.ClassesValue
 
setCloneAnonymousParent(boolean) - Method in class si.ijs.kt.clus.util.cloner.Cloner
if false, anonymous classes parent class won't be cloned.
setCloneSynthetics(boolean) - Method in class si.ijs.kt.clus.util.cloner.Cloner
 
setCloningEnabled(boolean) - Method in class si.ijs.kt.clus.util.cloner.Cloner
 
setClusterID(int) - Method in class si.ijs.kt.clus.ext.ilevelc.ILevelCStatistic
 
setClustering(boolean) - Method in class si.ijs.kt.clus.data.type.ClusAttrType
 
setClustering(String) - Method in class si.ijs.kt.clus.main.settings.section.SettingsAttribute
 
setClustering(IntervalCollection) - Method in class si.ijs.kt.clus.data.ClusSchema
 
setClustering(IntervalCollection, boolean) - Method in class si.ijs.kt.clus.data.ClusSchema
 
setClusteringAll(boolean) - Method in class si.ijs.kt.clus.data.ClusSchema
 
setClusteringStat(ClusStatistic) - Method in class si.ijs.kt.clus.algo.rules.ClusRule
 
setClusteringStat(ClusStatistic) - Method in class si.ijs.kt.clus.algo.tdidt.ClusNode
Mutators
setClusteringStat(ClusStatistic) - Method in class si.ijs.kt.clus.ext.optiontree.MyNode
 
setClusteringStatistic(ClusStatistic) - Method in class si.ijs.kt.clus.main.ClusStatManager
 
setClusteringWeights(ClusAttributeWeights) - Method in class si.ijs.kt.clus.main.ClusRun
 
setClusters(ArrayList<RowData>, ArrayList<Integer>) - Method in class si.ijs.kt.clus.heuristic.EncodingCost
 
setClusters(COPKMeansCluster[]) - Method in class si.ijs.kt.clus.ext.ilevelc.COPKMeansModel
 
setCommentChar() - Method in class si.ijs.kt.clus.util.jeans.util.MStreamTokenizer
 
setCommentChar() - Method in class si.ijs.kt.clus.util.jeans.util.MTokenizer
 
setCommentChar(int) - Method in class si.ijs.kt.clus.util.jeans.util.MStreamTokenizer
 
setCommentChar(int) - Method in class si.ijs.kt.clus.util.jeans.util.MTokenizer
 
setConfidenceThreshold(double) - Method in class si.ijs.kt.clus.main.settings.section.SettingsSSL
 
setConstraintPredictions(ArrayList<ClusStatistic>) - Method in class si.ijs.kt.clus.ext.beamsearch.ClusBeamSyntacticConstraint
 
setConstraints(ArrayList<ILevelConstraint>) - Method in class si.ijs.kt.clus.algo.rules.ClusRule
 
setCount(int, int, double) - Method in class si.ijs.kt.clus.statistic.ClassificationStat
 
setCoverage(double[]) - Method in class si.ijs.kt.clus.algo.rules.ClusRule
 
setCoveredBitVectArray(ArrayList) - Method in class si.ijs.kt.clus.heuristic.rules.ClusRuleHeuristicDispersion
 
setCoveringMethod(SettingsRules.CoveringMethod) - Method in class si.ijs.kt.clus.main.settings.section.SettingsRules
 
setCoveringWeight(double) - Method in class si.ijs.kt.clus.main.settings.section.SettingsRules
 
setCSets(int) - Method in class si.ijs.kt.clus.ext.ilevelc.COPKMeansModel
 
setCTree(int) - Method in class si.ijs.kt.clus.ext.exhaustivesearch.ClusExhaustiveDFSearch
 
setCurrentModel(int) - Method in class si.ijs.kt.clus.ext.beamsearch.ClusBeamSearch
 
setCurrentModel(int) - Method in class si.ijs.kt.clus.ext.exhaustivesearch.ClusExhaustiveSearch
 
setCurrentTree(ClusNode) - Method in class si.ijs.kt.clus.pruning.PruneTree
 
setData(double[]) - Method in class si.ijs.kt.clus.util.jeans.util.sort.DoubleIndexSorter
 
setData(double[][], int[][], int) - Method in class si.ijs.kt.clus.data.cols.ColTarget
 
setData(double[], int[]) - Method in class si.ijs.kt.clus.util.jeans.util.sort.DoubleIndexSorter
 
setData(RowData) - Method in class si.ijs.kt.clus.addon.sit.mtLearner.MTLearnerImpl
 
setData(RowData) - Method in class si.ijs.kt.clus.ext.beamsearch.ClusBeamAttrSelector
 
setData(RowData) - Method in class si.ijs.kt.clus.ext.optxval.OptXValGroup
 
setData(RowData) - Method in class si.ijs.kt.clus.heuristic.ClusHeuristic
 
setData(RowData) - Method in class si.ijs.kt.clus.heuristic.GeneticDistanceHeuristic
 
setData(RowData) - Method in class si.ijs.kt.clus.heuristic.GeneticDistanceHeuristicMatrix
 
setData(RowData) - Method in class si.ijs.kt.clus.heuristic.GISHeuristic
 
setData(RowData) - Method in class si.ijs.kt.clus.heuristic.rules.ClusRuleHeuristicSSD
 
setData(RowData) - Method in class si.ijs.kt.clus.heuristic.VarianceReductionHeuristic
 
setData(RowData) - Method in class si.ijs.kt.clus.statistic.ClassificationStat
 
setData(RowData) - Method in class si.ijs.kt.clus.statistic.ClusStatistic
 
setData(RowData) - Method in class si.ijs.kt.clus.statistic.RegressionStat
 
setData(RowData) - Method in class si.ijs.kt.clus.statistic.WHTDStatistic
 
setDataIndexes(boolean[]) - Method in class si.ijs.kt.clus.heuristic.rules.ClusRuleHeuristicDispersion
 
setDataIndexes(int[]) - Method in class si.ijs.kt.clus.heuristic.rules.ClusRuleHeuristicDispersion
 
setDataIndexesPerVal(int[][]) - Method in class si.ijs.kt.clus.heuristic.rules.ClusRuleHeuristicDispersion
 
setDataSet(int) - Method in class si.ijs.kt.clus.addon.hmc.HMCAverageSingleClass.HMCAverageTreeModel
 
setDatasetIndex(int) - Method in class si.ijs.kt.clus.data.rows.DataTuple
 
setDatasetIndex(int) - Method in class si.ijs.kt.clus.data.type.ClusAttrType
 
setDate(Date) - Method in class si.ijs.kt.clus.main.settings.section.SettingsGeneric
 
setDebug(boolean) - Method in class si.ijs.kt.clus.ext.beamsearch.ClusBeamSizeConstraints
 
setDebug(EnumSet<Clus.DebugType>) - Static method in class si.ijs.kt.clus.Clus
This sets global debugging flags.
setDEBUG(boolean) - Method in class si.ijs.kt.clus.algo.kNN.methods.SearchAlgorithm
Set DEBUG variable.
setDefault(int[]) - Method in class si.ijs.kt.clus.error.common.ClusNominalError
 
setDefault(ClusStatistic) - Method in class si.ijs.kt.clus.error.common.ClusNominalError
 
setDepth(double) - Method in class si.ijs.kt.clus.ext.hierarchical.ClassTerm
Setter for m_Depth.
setDescriptive(boolean) - Method in class si.ijs.kt.clus.data.type.ClusAttrType
 
setDescriptive(String) - Method in class si.ijs.kt.clus.main.settings.section.SettingsAttribute
 
setDescriptive(IntervalCollection) - Method in class si.ijs.kt.clus.data.ClusSchema
 
setDescriptive(IntervalCollection, boolean) - Method in class si.ijs.kt.clus.data.ClusSchema
 
setDescriptiveAll(boolean) - Method in class si.ijs.kt.clus.data.ClusSchema
 
setDisabled(String) - Method in class si.ijs.kt.clus.main.settings.section.SettingsAttribute
 
setDisabled(IntervalCollection) - Method in class si.ijs.kt.clus.data.ClusSchema
 
setDistance(ClusDistance) - Method in class si.ijs.kt.clus.distance.primitive.SearchDistance
 
SetDistance - Class in si.ijs.kt.clus.distance.complex
 
SetDistance(SetAttrType, ClusDistance) - Constructor for class si.ijs.kt.clus.distance.complex.SetDistance
 
SetDistance(ClusDistance) - Constructor for class si.ijs.kt.clus.distance.complex.SetDistance
 
setDistanceToBeam(double) - Method in class si.ijs.kt.clus.ext.beamsearch.ClusBeamModel
 
setDontCloneInstanceOf(Class<?>...) - Method in class si.ijs.kt.clus.util.cloner.Cloner
 
setDouble(double) - Method in class si.ijs.kt.clus.util.jeans.io.ini.INIFileNominalOrDoubleOrVector
 
setDouble(int, double) - Method in class si.ijs.kt.clus.util.jeans.io.ini.INIFileNominalOrDoubleOrVector
 
setDoubleArray(double[]) - Method in class si.ijs.kt.clus.util.jeans.io.ini.INIFileNominalOrDoubleOrVector
 
setDoubleVal(double, int) - Method in class si.ijs.kt.clus.data.rows.DataTuple
 
setDoubleValue(double) - Method in class si.ijs.kt.clus.util.jeans.io.ini.INIFileStringOrDouble
 
setDoubleValueSparse(Double, Integer) - Method in class si.ijs.kt.clus.data.rows.SparseDataTuple
 
setDumpCloned(IDumpCloned) - Method in class si.ijs.kt.clus.util.cloner.Cloner
provide a cloned classes dumper (so i.e.
setDumpClonedClasses(boolean) - Method in class si.ijs.kt.clus.util.cloner.Cloner
will println() all cloned classes.
setElementAt(int, int) - Method in class si.ijs.kt.clus.util.jeans.util.array.MyIntArray
 
setElementAt(Object, int) - Method in class si.ijs.kt.clus.util.jeans.util.MyArray
 
setEmptySetIndicator(String) - Static method in class si.ijs.kt.clus.ext.hierarchical.ClassesValue
 
setEnabled(boolean) - Method in class si.ijs.kt.clus.util.jeans.io.ini.INIFileNode
 
setEnabled(boolean) - Method in class si.ijs.kt.clus.util.jeans.io.MyFile
 
setEnsembleBagSize(int) - Method in class si.ijs.kt.clus.main.settings.section.SettingsEnsemble
Sets the size of bags for ensembles
setEnsembleMethod(String) - Method in class si.ijs.kt.clus.main.settings.section.SettingsEnsemble
 
setEnsembleMode(boolean) - Method in class si.ijs.kt.clus.main.settings.section.SettingsEnsemble
 
setEnsembleRankigDescription(int) - Method in class si.ijs.kt.clus.ext.featureRanking.ensemble.ClusEnsembleFeatureRanking
 
setEnsembleRankigDescription(int) - Method in class si.ijs.kt.clus.ext.featureRanking.ensemble.ClusEnsembleFeatureRankings
 
setEnsembleROSForestInfo(ClusROSForestInfo) - Method in class si.ijs.kt.clus.ext.ensemble.ClusForest
 
setEnsembleROSVotingType(SettingsEnsemble.EnsembleROSVotingType) - Method in class si.ijs.kt.clus.main.settings.section.SettingsEnsemble
 
setEntropyType(SettingsTree.EntropyType) - Method in class si.ijs.kt.clus.main.settings.section.SettingsTree
 
setError(ClusErrorList, int) - Method in class si.ijs.kt.clus.algo.rules.ClusRule
For computation of rule-wise error measures
setError(ClusErrorList, int) - Method in class si.ijs.kt.clus.algo.rules.ClusRuleSet
 
setErrorMeasure(ClusErrorList) - Method in class si.ijs.kt.clus.pruning.SizeConstraintPruning
 
setErrors(int, double, double[]) - Method in class si.ijs.kt.clus.ext.ensemble.ClusOOBWeights
 
setErrors(int, ClusError) - Method in class si.ijs.kt.clus.ext.ensemble.ClusOOBWeights
 
setEvalClasses(ClassesTuple) - Method in class si.ijs.kt.clus.ext.hierarchical.ClassHierarchy
 
setExamples(ArrayList<SparseDataTuple>) - Method in class si.ijs.kt.clus.data.type.primitive.SparseNumericAttrType
 
setExtraError(int, ClusErrorList) - Method in class si.ijs.kt.clus.model.ClusModelInfo
 
setExtraImmutables(Set<Class<?>>) - Method in class si.ijs.kt.clus.util.cloner.Cloner
 
setExtraNullInsteadOfClone(Set<Class<?>>) - Method in class si.ijs.kt.clus.util.cloner.Cloner
 
setExtraStaticFields(Set<Class<?>>) - Method in class si.ijs.kt.clus.util.cloner.Cloner
spring framework friendly version of registerStaticFields
setFakeLeaf(boolean) - Method in class si.ijs.kt.clus.util.jeans.tree.BinaryNode
 
setFeatureRankingMethod(String) - Method in class si.ijs.kt.clus.main.settings.section.SettingsEnsemble
 
setFimpHeader(String) - Method in class si.ijs.kt.clus.ext.featureRanking.ClusFeatureRanking
 
setFinalResult(ArrayList<SingleStatList>, int, int) - Method in class si.ijs.kt.clus.algo.tdidt.tune.CDTuneSizeConstrPruning
 
setFinished(boolean) - Method in class si.ijs.kt.clus.ext.beamsearch.ClusBeamModel
 
setFold(int, int) - Method in class si.ijs.kt.clus.ext.optxval.OptXValGroup
 
setFolds(int) - Method in class si.ijs.kt.clus.Clus
 
setFromList(ArrayList) - Method in class si.ijs.kt.clus.data.rows.RowData
 
setFTest(double, int) - Method in class si.ijs.kt.clus.main.settings.section.SettingsTree
 
setFTestEnabled(boolean) - Method in class si.ijs.kt.clus.main.settings.section.SettingsTree
 
setGenes(ArrayList<Double>) - Method in class si.ijs.kt.clus.util.tools.optimization.de.DEIndividual
 
setGenie3FimpHeader(ArrayList<String>) - Method in class si.ijs.kt.clus.ext.featureRanking.ensemble.ClusEnsembleFeatureRanking
 
setGIS(IntervalCollection) - Method in class si.ijs.kt.clus.data.ClusSchema
 
setGlobalStat(WHTDStatistic) - Method in class si.ijs.kt.clus.statistic.WHTDStatistic
 
setHasMissing(boolean) - Method in class si.ijs.kt.clus.pruning.SequencePruningVSB
 
setHeuristic(ClusHeuristic) - Method in class si.ijs.kt.clus.algo.rules.ClusRuleConstraintInduce
 
setHeuristic(ClusHeuristic) - Method in class si.ijs.kt.clus.algo.rules.ClusRuleInduce
 
setHeuristic(ClusHeuristic) - Method in class si.ijs.kt.clus.algo.split.CurrentBestTestAndHeuristic
 
setHeuristic(ClusHeuristic) - Method in class si.ijs.kt.clus.ext.optiontree.TestAndHeuristic
 
setHeuristic(SettingsTree.Heuristic) - Method in class si.ijs.kt.clus.main.settings.section.SettingsTree
 
setHeuristicRatio(int, double) - Method in class si.ijs.kt.clus.ext.optiontree.ClusOptionNode
 
setHeuristicRatios(double[]) - Method in class si.ijs.kt.clus.ext.optiontree.ClusOptionNode
 
setHeuristicValue(double) - Method in class si.ijs.kt.clus.model.test.NodeTest
 
setHeurPrototypeDistPar(double) - Method in class si.ijs.kt.clus.main.settings.section.SettingsRules
 
setHeurRuleDistPar(double) - Method in class si.ijs.kt.clus.main.settings.section.SettingsRules
 
setHier(ClassHierarchy) - Method in class si.ijs.kt.clus.statistic.WHTDStatistic
 
setHierType(int) - Method in class si.ijs.kt.clus.ext.hierarchical.ClassHierarchy
 
setHierTypeFromSettings(SettingsHMLC.HierarchyType) - Method in class si.ijs.kt.clus.ext.hierarchical.ClassHierarchy
 
setHmcThreshold(double) - Method in class si.ijs.kt.clus.ext.semisupervised.confidence.OracleScore
Threshold for prediction in the context of hierarchical multi-label classification
setHMTRHierarchy(ClusHMTRHierarchy) - Method in class si.ijs.kt.clus.data.ClusSchema
 
setHMTRUsingDump(boolean) - Method in class si.ijs.kt.clus.main.settings.section.SettingsHMTR
 
setHSeparator(String) - Static method in class si.ijs.kt.clus.ext.hierarchical.ClassesValue
 
setID(int) - Method in class si.ijs.kt.clus.algo.rules.ClusRule
 
setID(String) - Method in class si.ijs.kt.clus.ext.hierarchical.ClassTerm
 
setIllegal(boolean) - Method in class si.ijs.kt.clus.ext.ilevelc.COPKMeansModel
 
setIndex(int) - Method in class si.ijs.kt.clus.data.rows.DataTuple
 
setIndex(int) - Method in class si.ijs.kt.clus.data.type.ClusAttrType
 
setIndex(int) - Method in class si.ijs.kt.clus.data.type.primitive.SparseNumericAttrType
 
setIndex(int) - Method in class si.ijs.kt.clus.ext.ilevelc.COPKMeansCluster
 
setIndex(int) - Method in class si.ijs.kt.clus.main.ClusRun
 
setIndex(int) - Method in class si.ijs.kt.clus.util.jeans.util.compound.IndexedItem
 
setIndices(int[][], ArrayList, int[], int[]) - Method in class si.ijs.kt.clus.ext.ilevelc.ILevelCHeurStat
 
setInductionOrder(SettingsTree.InductionOrder) - Method in class si.ijs.kt.clus.main.settings.section.SettingsTree
 
setInductionTime(long) - Method in class si.ijs.kt.clus.main.ClusModelInfoList
************************************************************************* Induction time *************************************************************************
setInductionTimeSequential(long) - Method in class si.ijs.kt.clus.main.ClusModelInfoList
 
setInitialData(ClusStatistic, RowData) - Method in class si.ijs.kt.clus.algo.split.CurrentBestTestAndHeuristic
 
setInitialData(ClusStatistic, RowData) - Method in class si.ijs.kt.clus.algo.split.FindBestTest
 
setInitialData(ClusStatistic, RowData) - Method in class si.ijs.kt.clus.algo.tdidt.DepthFirstInduce
 
setInitialData(ClusStatistic, RowData) - Method in class si.ijs.kt.clus.ext.bestfirst.BestFirstInduce
 
setInitialData(ClusStatistic, RowData) - Method in class si.ijs.kt.clus.ext.optiontree.FindBestTests
 
setInitialData(ClusStatistic, RowData) - Method in class si.ijs.kt.clus.ext.optiontree.TestAndHeuristic
 
setInitialData(ClusStatistic, RowData) - Method in class si.ijs.kt.clus.heuristic.ClusHeuristic
 
setInitialData(ClusStatistic, RowData) - Method in class si.ijs.kt.clus.heuristic.GeneticDistanceHeuristicMatrix
 
setInitialData(ClusStatistic, RowData) - Method in class si.ijs.kt.clus.heuristic.GISHeuristic
 
setInitialRuleGeneratingMethod(SettingsRules.InitialRuleGeneratingMethod) - Method in class si.ijs.kt.clus.main.settings.section.SettingsRules
 
setInnerTypes(ClusAttrType[]) - Method in class si.ijs.kt.clus.data.type.ClusAttrType
 
setInstCoveringWeightThreshold(double) - Method in class si.ijs.kt.clus.main.settings.section.SettingsRules
 
setInt(int) - Method in class si.ijs.kt.clus.util.jeans.io.ini.INIFileNominalOrIntOrVector
 
setInt(int, int) - Method in class si.ijs.kt.clus.util.jeans.io.ini.INIFileNominalOrIntOrVector
 
setIntermediate(boolean) - Method in class si.ijs.kt.clus.ext.hierarchical.ClassesValue
 
setIntVal(int, int) - Method in class si.ijs.kt.clus.data.rows.DataTuple
 
setIntValue(int) - Method in class si.ijs.kt.clus.util.jeans.io.ini.INIFileStringOrInt
 
setIntVector(int[]) - Method in class si.ijs.kt.clus.util.jeans.io.ini.INIFileNominalOrIntOrVector
 
setIS_RULE_SIG_TESTING(boolean) - Method in class si.ijs.kt.clus.main.settings.section.SettingsRules
 
setIsBeamUpdated(boolean) - Method in class si.ijs.kt.clus.ext.beamsearch.ClusBeamModelDistance
 
setIsInternalXValRun(boolean) - Method in class si.ijs.kt.clus.main.ClusRun
 
setIsLessBetter(boolean) - Method in class si.ijs.kt.clus.ext.semisupervised.confidence.normalization.MinMaxNormalization
 
setIsLessBetter(boolean) - Method in class si.ijs.kt.clus.ext.semisupervised.confidence.normalization.NoNormalization
 
setIsLessBetter(boolean) - Method in interface si.ijs.kt.clus.ext.semisupervised.confidence.normalization.Normalization
Set to true if less is better, of false if more is better
setIsLessBetter(boolean) - Method in class si.ijs.kt.clus.ext.semisupervised.confidence.normalization.Ranking
 
setIsLessBetter(boolean) - Method in class si.ijs.kt.clus.ext.semisupervised.confidence.normalization.Standardization
 
setIsUsingDump(boolean) - Method in class si.ijs.kt.clus.ext.hierarchicalmtr.ClusHMTRHierarchy
 
setItemAt(ClassesValue, int) - Method in class si.ijs.kt.clus.ext.hierarchical.ClassesTuple
 
setItemsHistory(double) - Method in class si.ijs.kt.clus.algo.kNN.methods.vpTree.VPItem
 
setIterations(int) - Method in class si.ijs.kt.clus.ext.ilevelc.COPKMeansModel
 
setIterations(int) - Method in class si.ijs.kt.clus.main.settings.section.SettingsSSL
 
setK(int) - Method in class si.ijs.kt.clus.ext.ilevelc.COPKMeansModel
 
setK(int) - Method in class si.ijs.kt.clus.main.settings.section.SettingsSSL
 
setKey(IntervalCollection) - Method in class si.ijs.kt.clus.data.ClusSchema
 
setKNNAttrWeight(String) - Method in class si.ijs.kt.clus.main.settings.section.SettingsKNN
 
setLastChar(int) - Method in class si.ijs.kt.clus.data.io.ClusReader
 
setLeft(BinaryNode) - Method in class si.ijs.kt.clus.util.jeans.tree.BinaryNode
 
setLeftSubtree(VPNode) - Method in class si.ijs.kt.clus.algo.kNN.methods.vpTree.VPNode
 
setLength(int) - Method in class si.ijs.kt.clus.ext.hierarchical.ClassesTuple
 
setLine(String) - Method in class si.ijs.kt.clus.model.test.FakeTest
 
setLine(String) - Method in class si.ijs.kt.clus.util.jeans.util.MultiDelimStringTokenizer
 
setLocked(boolean) - Method in class si.ijs.kt.clus.ext.hierarchical.ClassHierarchy
 
setM5PruningMultEnabled(boolean) - Method in class si.ijs.kt.clus.main.settings.section.SettingsTree
 
setMainTarget(String) - Method in class si.ijs.kt.clus.main.settings.section.SettingsSIT
 
setMainTarget(ClusAttrType) - Method in interface si.ijs.kt.clus.addon.sit.mtLearner.MTLearner
Some model can return predictions for targets that are not included in the targetset.
setMainTarget(ClusAttrType) - Method in class si.ijs.kt.clus.addon.sit.mtLearner.MTLearnerImpl
 
setMax(double) - Method in class si.ijs.kt.clus.algo.kNN.distance.valentin.NumericStatistic
 
setMaxDepth(int) - Method in class si.ijs.kt.clus.ext.hierarchical.ClassTerm
 
setMaxError(double[]) - Method in class si.ijs.kt.clus.pruning.SizeConstraintPruning
 
setMaxRulesNb(int) - Method in class si.ijs.kt.clus.main.settings.section.SettingsRules
 
setMean(double) - Method in class si.ijs.kt.clus.algo.kNN.distance.valentin.NumericStatistic
 
setMean(int) - Method in class si.ijs.kt.clus.algo.kNN.distance.valentin.NominalStatistic
 
setMeans(double[]) - Method in class si.ijs.kt.clus.statistic.RegressionStatBase
 
setMeanTuple(boolean[]) - Method in class si.ijs.kt.clus.statistic.WHTDStatistic
 
setMeanTuple(ClassesTuple) - Method in class si.ijs.kt.clus.statistic.WHTDStatistic
 
setMedian(double) - Method in class si.ijs.kt.clus.algo.kNN.methods.vpTree.VPNode
 
setMin(double) - Method in class si.ijs.kt.clus.algo.kNN.distance.valentin.NumericStatistic
 
setMinDepth(int) - Method in class si.ijs.kt.clus.ext.hierarchical.ClassTerm
 
setMinimalWeight(double) - Method in class si.ijs.kt.clus.main.settings.section.SettingsModel
 
setMissingAttrHandlingToTrainingSet() - Method in class si.ijs.kt.clus.main.settings.section.SettingsTree
 
setMissingClusteringAttrHandling(SettingsTree.MissingClusteringAttributeHandlingType) - Method in class si.ijs.kt.clus.main.settings.section.SettingsTree
 
setMissingTargetAttrHandling(SettingsTree.MissingTargetAttributeHandlingType) - Method in class si.ijs.kt.clus.main.settings.section.SettingsTree
 
setModel(ClusNode) - Method in class si.ijs.kt.clus.ext.beamsearch.ClusBeamModel
 
setModel(ClusModel) - Method in class si.ijs.kt.clus.model.ClusModelInfo
 
setModelInfo(int, ClusModelInfo) - Method in class si.ijs.kt.clus.main.ClusModelInfoList
 
setModelInfo(String) - Method in class si.ijs.kt.clus.ext.ensemble.ClusForest
Set some additional model info (used in self-training, which wraps around ensembles)
setModelPredictions(ArrayList<ClusStatistic>) - Method in class si.ijs.kt.clus.ext.beamsearch.ClusBeamModel
 
setModels(ArrayList<ClusModel>) - Method in class si.ijs.kt.clus.ext.ensemble.ClusForest
 
setModels(ArrayList<ClusModelInfo>) - Method in class si.ijs.kt.clus.main.ClusModelInfoList
 
setMTLearner(MTLearner) - Method in class si.ijs.kt.clus.addon.sit.searchAlgorithm.AllTargets
 
setMTLearner(MTLearner) - Method in class si.ijs.kt.clus.addon.sit.searchAlgorithm.OneTarget
 
setMTLearner(MTLearner) - Method in interface si.ijs.kt.clus.addon.sit.searchAlgorithm.SearchAlgorithm
 
setMTLearner(MTLearner) - Method in class si.ijs.kt.clus.addon.sit.searchAlgorithm.SearchAlgorithmImpl
 
setName(String) - Method in class si.ijs.kt.clus.data.type.ClusAttrType
 
setName(String) - Method in class si.ijs.kt.clus.model.ClusModelInfo
 
setName(String) - Method in class si.ijs.kt.clus.util.jeans.io.ini.INIFileNode
 
setName(String) - Method in class si.ijs.kt.clus.util.jeans.tree.BinaryNode
 
setNamedValue(int, String) - Method in class si.ijs.kt.clus.util.jeans.io.ini.INIFileInt
 
setNbAttributes(int) - Method in class si.ijs.kt.clus.statistic.RegressionStatBase
 
setNbBags(int) - Method in class si.ijs.kt.clus.main.settings.section.SettingsEnsemble
 
setNbChildren(int) - Method in class si.ijs.kt.clus.ext.optiontree.MyNode
 
setNbChildren(int) - Method in class si.ijs.kt.clus.util.jeans.tree.MyNode
 
setNbExamples(int) - Method in class si.ijs.kt.clus.error.common.ClusErrorList
 
setNbExamples(int, int) - Method in class si.ijs.kt.clus.error.common.ClusErrorList
 
setNbFeatureRankings(int) - Method in class si.ijs.kt.clus.ext.featureRanking.ClusFeatureRanking
 
setNbFeatureRankings(ClusSchema, ClusStatManager) - Method in class si.ijs.kt.clus.ext.ensemble.ClusEnsembleInduce
 
setNbFeatureRankings(SettingsEnsemble.EnsembleRanking, ClusEnsembleFeatureRanking, ClusSchema, ClusStatManager, int) - Method in class si.ijs.kt.clus.ext.ensemble.ClusEnsembleInduce
Sets the number of feature rankings and the ranking description.
setNbFolds(int) - Method in class si.ijs.kt.clus.ext.optxval.OptXValInduce
 
setNbHMTRAttributes(int) - Method in class si.ijs.kt.clus.data.ClusSchema
 
setNbMissing(int) - Method in class si.ijs.kt.clus.data.type.ClusAttrType
 
setNbRandomAttrSelected(int) - Method in class si.ijs.kt.clus.main.settings.section.SettingsEnsemble
 
setNbRandomTargetAttrString(String) - Method in class si.ijs.kt.clus.main.settings.section.SettingsEnsemble
 
setNbRows(int) - Method in class si.ijs.kt.clus.data.ClusData
 
setNbRows(int) - Method in class si.ijs.kt.clus.data.cols.ColTarget
 
setNbRows(int) - Method in class si.ijs.kt.clus.data.type.ClusAttrType
 
setNbRows(int) - Method in class si.ijs.kt.clus.data.type.primitive.IndexAttrType
 
setNbSequences(int) - Method in class si.ijs.kt.clus.heuristic.EncodingCost
 
setNbTotal(int) - Method in class si.ijs.kt.clus.error.common.ClusErrorList
 
setNext(MyList) - Method in class si.ijs.kt.clus.util.jeans.util.list.MyList
 
setNode(int, ClusNode) - Method in class si.ijs.kt.clus.ext.optxval.OptXValNode
 
setNodeClusters(ArrayList<ClusNode>, ArrayList<RowData>) - Method in class si.ijs.kt.clus.heuristic.EncodingCost
 
setNodeIndex(int, ClusNode) - Method in class si.ijs.kt.clus.ext.optxval.OptXValNode
 
setNominal(int) - Method in class si.ijs.kt.clus.util.jeans.io.ini.INIFileNominalOrDoubleOrVector
 
setNominal(int) - Method in class si.ijs.kt.clus.util.jeans.io.ini.INIFileNominalOrIntOrVector
 
setNominal(int, int) - Method in class si.ijs.kt.clus.util.jeans.io.ini.INIFileNominalOrDoubleOrVector
 
setNominal(int, int) - Method in class si.ijs.kt.clus.util.jeans.io.ini.INIFileNominalOrIntOrVector
 
setNominal(int, int, int) - Method in class si.ijs.kt.clus.data.cols.ColTarget
 
setNominal(DataTuple, int) - Method in class si.ijs.kt.clus.data.type.BitwiseNominalAttrType
 
setNominal(DataTuple, int) - Method in class si.ijs.kt.clus.data.type.primitive.NominalAttrType
 
setNormalizationWeights(double[], double[]) - Method in class si.ijs.kt.clus.distance.primitive.SearchDistance
Minimal and maximal values of numeric attributes are converted to normalization weights.
setNoRootPreds(boolean) - Method in class si.ijs.kt.clus.ext.hierarchical.HierRemoveInsigClasses
 
setNullTransient(boolean) - Method in class si.ijs.kt.clus.util.cloner.Cloner
this makes the cloner to set a transient field to null upon cloning.
setNumberOfPossibleValues(int) - Method in class si.ijs.kt.clus.data.type.complex.SetAttrType
 
setNumberOfThreads(int) - Method in class si.ijs.kt.clus.ext.ensemble.ClusEnsembleInduce
Sets the number of threads used when inducing an ensemble.
setNumeric(int, int, double) - Method in class si.ijs.kt.clus.data.cols.ColTarget
 
setNumeric(DataTuple, double) - Method in class si.ijs.kt.clus.data.type.primitive.NumericAttrType
 
setNumeric(DataTuple, double) - Method in class si.ijs.kt.clus.data.type.primitive.SparseNumericAttrType
 
setNumericPrediction(double[]) - Method in class si.ijs.kt.clus.algo.rules.ClusRule
Given double predictions, sets the target stat.
setObj1(Object) - Method in class si.ijs.kt.clus.util.jeans.util.compound.DuoObject
 
setObj2(Object) - Method in class si.ijs.kt.clus.util.jeans.util.compound.DuoObject
 
setObject(Comparable) - Method in class si.ijs.kt.clus.ext.beamsearch.ClusBeamTreeElem
 
setObjectVal(Object, int) - Method in class si.ijs.kt.clus.data.rows.DataTuple
 
setOOBCalculation(boolean) - Method in class si.ijs.kt.clus.ext.ensemble.ClusOOBErrorEstimate
 
setOOBestimate(boolean) - Method in class si.ijs.kt.clus.main.settings.section.SettingsEnsemble
 
setOOBWeightsEstimates(ClusOOBWeights) - Method in class si.ijs.kt.clus.ext.ensemble.ClusForest
OOB estimates for all ensemble members.
SetOperations - Class in si.ijs.kt.clus.ext.structuredTypes
 
SetOperations() - Constructor for class si.ijs.kt.clus.ext.structuredTypes.SetOperations
 
setOppositeAlternatives(ArrayList<NodeTest>) - Method in class si.ijs.kt.clus.algo.tdidt.ClusNode
 
setOptGDGradTreshold(double) - Method in class si.ijs.kt.clus.main.settings.section.SettingsRules
GD Treshold [0,1] for changing the gradient.
setOptGDMaxIter(int) - Method in class si.ijs.kt.clus.main.settings.section.SettingsRules
 
setOptGDMaxNbWeights(int) - Method in class si.ijs.kt.clus.main.settings.section.SettingsRules
GD Maximum number of nonzero weights.
setOptimization(ClusEnsembleInduceOptimization) - Method in class si.ijs.kt.clus.ext.ensemble.ClusForest
 
setOptNbZeroesPar(double) - Method in class si.ijs.kt.clus.main.settings.section.SettingsRules
Optimization regularization parameter - number of zeroes
setOptRegPar(double) - Method in class si.ijs.kt.clus.main.settings.section.SettingsRules
Optimization regularization parameter
setOptWeight(double) - Method in class si.ijs.kt.clus.algo.rules.ClusRule
 
setOriginalTree(ClusNode) - Method in class si.ijs.kt.clus.pruning.PruneTree
 
setOrigSet(ClusData) - Method in class si.ijs.kt.clus.main.ClusRun
 
setOutputClowdFlows(boolean) - Method in class si.ijs.kt.clus.main.settings.section.SettingsOutput
 
setOutputFile(String) - Method in class si.ijs.kt.clus.pruning.SequencePruningVSB
 
setOutTestError(boolean) - Method in class si.ijs.kt.clus.main.settings.section.SettingsOutput
 
setOutTrainError(boolean) - Method in class si.ijs.kt.clus.main.settings.section.SettingsOutput
 
setOutValidError(boolean) - Method in class si.ijs.kt.clus.main.settings.section.SettingsOutput
 
setParent(MyNode) - Method in class si.ijs.kt.clus.ext.optiontree.MyNode
 
setParent(INIFileNode) - Method in class si.ijs.kt.clus.util.jeans.io.ini.INIFileNode
 
setParent(Node) - Method in class si.ijs.kt.clus.ext.hierarchical.ClassTerm
 
setParent(Node) - Method in class si.ijs.kt.clus.util.jeans.tree.BinaryNode
 
setParent(Node) - Method in class si.ijs.kt.clus.util.jeans.tree.MyNode
 
setParent(Node) - Method in interface si.ijs.kt.clus.util.jeans.tree.Node
 
setParent(Node) - Method in class si.ijs.kt.clus.util.jeans.tree.SimpleNode
 
setParent(Node) - Method in class si.ijs.kt.clus.util.jeans.tree.VisitableNode
 
setParentModelIndex(int) - Method in class si.ijs.kt.clus.ext.beamsearch.ClusBeamModel
 
setParentStat(ClusStatistic) - Method in class si.ijs.kt.clus.error.common.multiscore.MultiScoreStat
 
setParentStat(ClusStatistic) - Method in class si.ijs.kt.clus.statistic.BitVectorStat
 
setParentStat(ClusStatistic) - Method in class si.ijs.kt.clus.statistic.ClassificationStat
 
setParentStat(ClusStatistic) - Method in class si.ijs.kt.clus.statistic.ClusStatistic
 
setParentStat(ClusStatistic) - Method in class si.ijs.kt.clus.statistic.CombStat
 
setParentStat(ClusStatistic) - Method in class si.ijs.kt.clus.statistic.CombStatClassRegHier
 
setParentStat(ClusStatistic) - Method in class si.ijs.kt.clus.statistic.RegressionStat
 
setParentStat(ClusStatistic) - Method in class si.ijs.kt.clus.statistic.RegressionStatBinaryNomiss
 
setParentStatsToChildren() - Method in class si.ijs.kt.clus.algo.split.FindBestTest
Set parent stats to children of this node
setParentStatsToTests() - Method in class si.ijs.kt.clus.algo.split.CurrentBestTestAndHeuristic
 
setParentStatsToThis(ClusStatistic) - Method in class si.ijs.kt.clus.algo.split.FindBestTest
Set parent stat to this node
setParentStatsToTotal(ClusStatistic) - Method in class si.ijs.kt.clus.algo.split.CurrentBestTestAndHeuristic
 
setPath(String, int) - Method in class si.ijs.kt.clus.ext.hierarchical.ClassesValue
 
setPerformRankingPerTarget(boolean) - Method in class si.ijs.kt.clus.main.settings.section.SettingsEnsemble
 
setPosFreq(double) - Method in class si.ijs.kt.clus.model.test.NodeTest
 
setPrepareTime(long) - Method in class si.ijs.kt.clus.main.ClusModelInfoList
 
setPreprocs(DataPreprocs) - Method in class si.ijs.kt.clus.data.rows.TupleIterator
 
setPrevIndex(int) - Method in class si.ijs.kt.clus.statistic.ClassificationStat
 
setPrevIndex(int) - Method in class si.ijs.kt.clus.statistic.ClusStatistic
 
setPrevIndex(int) - Method in class si.ijs.kt.clus.statistic.RegressionStat
 
setPrevIndex(int) - Method in class si.ijs.kt.clus.statistic.WHTDStatistic
 
setPrintAllRules(boolean) - Method in class si.ijs.kt.clus.main.settings.section.SettingsRules
 
setPrintModels(boolean) - Method in class si.ijs.kt.clus.ext.ensemble.ClusForest
 
setProportion(double[]) - Method in class si.ijs.kt.clus.model.test.NodeTest
 
setProportion(int, double) - Method in class si.ijs.kt.clus.model.test.NodeTest
 
setPrototype(INIFileSection) - Method in class si.ijs.kt.clus.util.jeans.io.ini.INIFileSectionGroup
 
setPruneInvalid(boolean) - Method in class si.ijs.kt.clus.model.ClusModelInfo
 
setPruneSet(ClusData, ClusSelection) - Method in class si.ijs.kt.clus.main.ClusRun
 
setPruneSetMaxEnabled(boolean) - Method in class si.ijs.kt.clus.main.settings.section.SettingsData
 
setPruneTime(long) - Method in class si.ijs.kt.clus.main.ClusModelInfoList
 
setPruningMethod(SettingsTree.PruningMethod) - Method in class si.ijs.kt.clus.main.settings.section.SettingsTree
 
setRandIndex(double) - Method in class si.ijs.kt.clus.ext.ilevelc.COPKMeansModel
 
setRandomSeed(int) - Method in class si.ijs.kt.clus.selection.RandomSelection
 
setRandomSubspaces(ClusAttrType[]) - Static method in class si.ijs.kt.clus.ext.ensemble.ClusEnsembleInduce
 
setRankingDescription(String) - Method in class si.ijs.kt.clus.ext.featureRanking.ClusFeatureRanking
 
setReader(boolean) - Method in class si.ijs.kt.clus.data.ClusSchema
 
setReader(boolean) - Method in class si.ijs.kt.clus.data.type.ClusAttrType
 
setReader(boolean) - Method in class si.ijs.kt.clus.util.jeans.io.range.NominalType
 
setRefined(boolean) - Method in class si.ijs.kt.clus.ext.beamsearch.ClusBeamModel
 
setRefinement(Object) - Method in class si.ijs.kt.clus.ext.beamsearch.ClusBeamModel
 
setRelationName(String) - Method in class si.ijs.kt.clus.data.ClusSchema
 
setRelativeMeasure(boolean, double) - Method in class si.ijs.kt.clus.algo.tdidt.tune.CDTuneSizeConstrPruning
 
setReliefDescription(int[], int[]) - Method in class si.ijs.kt.clus.ext.featureRanking.relief.ClusReliefFeatureRanking
 
setReliefFimpHeader(ArrayList<String>) - Method in class si.ijs.kt.clus.ext.featureRanking.relief.ClusReliefFeatureRanking
 
setRForestFimpHeader(ArrayList<String>) - Method in class si.ijs.kt.clus.ext.featureRanking.ensemble.ClusEnsembleFeatureRanking
 
setRight(BinaryNode) - Method in class si.ijs.kt.clus.util.jeans.tree.BinaryNode
 
setRightSubtree(VPNode) - Method in class si.ijs.kt.clus.algo.kNN.methods.vpTree.VPNode
 
setRootStatistic(ClusStatistic) - Method in class si.ijs.kt.clus.algo.split.CurrentBestTestAndHeuristic
Statistics on data
setRootStatistic(ClusStatistic) - Method in class si.ijs.kt.clus.ext.beamsearch.ClusBeamHeuristic
 
setRootStatistic(ClusStatistic) - Method in class si.ijs.kt.clus.ext.beamsearch.ClusBeamHeuristicMEstimate
 
setRootStatistic(ClusStatistic) - Method in class si.ijs.kt.clus.ext.beamsearch.ClusBeamHeuristicMorishita
 
setRootStatistic(ClusStatistic) - Method in class si.ijs.kt.clus.ext.beamsearch.ClusBeamHeuristicSS
 
setRootStatistic(ClusStatistic) - Method in class si.ijs.kt.clus.ext.optiontree.TestAndHeuristic
Statistics on data
setRootStatistic(ClusStatistic) - Method in class si.ijs.kt.clus.heuristic.ClusHeuristic
 
setRootStatistic(ClusStatistic) - Method in class si.ijs.kt.clus.heuristic.ReducedErrorHeuristic
 
setRootStatistic(ClusStatistic) - Method in class si.ijs.kt.clus.heuristic.rules.ClusRuleHeuristicMEstimate
 
setROSModelInfo(ClusROSModelInfo) - Method in class si.ijs.kt.clus.algo.rules.ClusRule
 
setROSModelInfo(ClusROSModelInfo) - Method in class si.ijs.kt.clus.algo.tdidt.ClusNode
 
setROSModelInfo(ClusROSModelInfo) - Method in class si.ijs.kt.clus.data.attweights.ClusAttributeWeights
 
setRuleAddingMethod(SettingsRules.RuleAddingMethod) - Method in class si.ijs.kt.clus.main.settings.section.SettingsRules
 
setRuleInduceOnly(boolean) - Method in class si.ijs.kt.clus.main.ClusStatManager
 
setRulePredictionMethod(SettingsRules.RulePredictionMethod) - Method in class si.ijs.kt.clus.main.settings.section.SettingsRules
 
setSchema(ClusSchema) - Method in class si.ijs.kt.clus.data.rows.DataTuple
 
setSchema(ClusSchema) - Method in class si.ijs.kt.clus.data.rows.RowData
 
setSchema(ClusSchema) - Method in class si.ijs.kt.clus.data.type.ClusAttrType
 
setScore(double) - Method in class si.ijs.kt.clus.model.ClusModelInfo
 
setSDataSize(int) - Method in class si.ijs.kt.clus.algo.split.NArySplit
 
setSDataSize(int) - Method in class si.ijs.kt.clus.algo.split.NominalSplit
 
setSDataSize(int) - Method in class si.ijs.kt.clus.algo.split.SubsetSplit
 
setSDataSize(int) - Method in class si.ijs.kt.clus.statistic.BitVectorStat
 
setSDataSize(int) - Method in class si.ijs.kt.clus.statistic.ClusStatistic
 
setSDataSize(int) - Method in class si.ijs.kt.clus.statistic.HierSumPairwiseDistancesStat
 
setSearch(String) - Method in class si.ijs.kt.clus.main.settings.section.SettingsSIT
 
setSectionBeamEnabled(boolean) - Method in class si.ijs.kt.clus.main.settings.section.SettingsBeamSearch
 
setSectionEnsembleEnabled(boolean) - Method in class si.ijs.kt.clus.main.settings.section.SettingsEnsemble
Do we print ensemble settings to output files
setSectionExhaustiveEnabled(boolean) - Method in class si.ijs.kt.clus.main.settings.section.SettingsExhaustiveSearch
 
setSectionHierarchicalEnabled(boolean) - Method in class si.ijs.kt.clus.main.settings.section.SettingsHMLC
 
setSectionHMTREnabled(boolean) - Method in class si.ijs.kt.clus.main.settings.section.SettingsHMTR
 
setSectionKNNEnabled(boolean) - Method in class si.ijs.kt.clus.main.settings.section.SettingsKNN
 
setSectionKNNTEnabled(boolean) - Method in class si.ijs.kt.clus.main.settings.section.SettingsKNNTree
 
setSectionMultiLabelEnabled(boolean) - Method in class si.ijs.kt.clus.main.settings.section.SettingsMLC
 
setSectionOptionEnabled(boolean) - Method in class si.ijs.kt.clus.main.settings.section.SettingsOptionTree
 
setSectionPhylogenyEnabled(boolean) - Method in class si.ijs.kt.clus.main.settings.section.SettingsPhylogeny
 
setSectionReliefEnabled(boolean) - Method in class si.ijs.kt.clus.main.settings.section.SettingsRelief
 
setSectionRulesEnabled(boolean) - Method in class si.ijs.kt.clus.main.settings.section.SettingsRules
 
setSectionSITEnabled(boolean) - Method in class si.ijs.kt.clus.main.settings.section.SettingsSIT
 
setSectionTimeSeriesEnabled(boolean) - Method in class si.ijs.kt.clus.main.settings.section.SettingsTimeSeries
 
setSectionTreeEnabled(boolean) - Method in class si.ijs.kt.clus.main.settings.section.SettingsTree
 
setSelectedErrorsClone(ClusErrorList, ClusErrorList, ClusErrorList) - Method in class si.ijs.kt.clus.model.ClusModelInfo
 
setSemiSupervisedMethod(SettingsSSL.SSLMethod) - Method in class si.ijs.kt.clus.main.settings.section.SettingsSSL
 
setSemiSupervisedMode(boolean) - Method in class si.ijs.kt.clus.main.settings.section.SettingsSSL
 
setSeparatorType(boolean) - Method in class si.ijs.kt.clus.util.jeans.util.MStreamTokenizer
 
setSequencePruner(PruneTree) - Method in class si.ijs.kt.clus.pruning.SequencePruningVSB
 
setSet(DataTuple, Set) - Method in class si.ijs.kt.clus.data.type.complex.SetAttrType
 
setSetDistance(SettingsTree.SetDistance) - Method in class si.ijs.kt.clus.main.settings.section.SettingsTree
 
setSettings(Settings) - Method in class si.ijs.kt.clus.addon.sit.searchAlgorithm.AllTargets
 
setSettings(Settings) - Method in class si.ijs.kt.clus.addon.sit.searchAlgorithm.OneTarget
 
setSettings(Settings) - Method in interface si.ijs.kt.clus.addon.sit.searchAlgorithm.SearchAlgorithm
 
setSettings(Settings) - Method in class si.ijs.kt.clus.addon.sit.searchAlgorithm.SearchAlgorithmImpl
 
setSettings(Settings) - Method in class si.ijs.kt.clus.data.ClusSchema
 
setSetWeight(double) - Method in class si.ijs.kt.clus.ext.structuredTypes.Set
 
setShouldAttach(boolean) - Method in class si.ijs.kt.clus.data.rows.TupleIterator
 
setShouldSave(boolean) - Method in class si.ijs.kt.clus.model.ClusModelInfo
 
setShouldWritePredictions(boolean) - Method in class si.ijs.kt.clus.model.ClusModelInfo
 
setSigLevel(double) - Method in class si.ijs.kt.clus.statistic.WHTDStatistic
 
setSignificance(double) - Method in class si.ijs.kt.clus.ext.hierarchical.HierRemoveInsigClasses
 
setSingleValue(int) - Method in class si.ijs.kt.clus.util.jeans.io.ini.INIFileNominal
 
setSize(int) - Method in class si.ijs.kt.clus.ext.hierarchical.ClassesTuple
 
setSize(int) - Method in class si.ijs.kt.clus.ext.timeseries.TimeSeries
Sets a new size for the time series
setSize(int) - Method in class si.ijs.kt.clus.util.jeans.util.MyArray
 
setSizeConstraintPruning(int) - Method in class si.ijs.kt.clus.main.settings.section.SettingsConstraints
 
setSoft() - Method in class si.ijs.kt.clus.ext.optxval.OptXValGroup
 
setSpaceChars(String) - Method in class si.ijs.kt.clus.util.jeans.util.MStringTokenizer
 
setSparse() - Method in class si.ijs.kt.clus.data.ClusSchema
 
setSparse(boolean) - Method in class si.ijs.kt.clus.data.type.primitive.NumericAttrType
 
setSpatialMatrix(SettingsTree.SpatialMatrixType) - Method in class si.ijs.kt.clus.main.settings.section.SettingsTree
 
setSpatialMeasure(SettingsTree.SpatialMeasure) - Method in class si.ijs.kt.clus.main.settings.section.SettingsTree
 
setSplit(boolean) - Method in class si.ijs.kt.clus.data.cols.attribute.ClusAttribute
 
setSplitIndex(int) - Method in class si.ijs.kt.clus.statistic.ClassificationStat
 
setSplitIndex(int) - Method in class si.ijs.kt.clus.statistic.ClusStatistic
 
setSplitIndex(int) - Method in class si.ijs.kt.clus.statistic.RegressionStat
 
setSplitIndex(int) - Method in class si.ijs.kt.clus.statistic.WHTDStatistic
 
setSplitStatSVarS(double) - Method in class si.ijs.kt.clus.heuristic.ClusHeuristic
 
setSSLInternalFolds(String) - Method in class si.ijs.kt.clus.main.settings.section.SettingsSSL
 
setSSLPruningWhenTuning(String) - Method in class si.ijs.kt.clus.main.settings.section.SettingsSSL
 
setStat(ClusStatistic) - Method in class si.ijs.kt.clus.ext.ensemble.ClusForest
 
setStatistic(NominalStatistic) - Method in class si.ijs.kt.clus.data.type.primitive.NominalAttrType
 
setStatistic(NumericStatistic) - Method in class si.ijs.kt.clus.data.type.primitive.NumericAttrType
 
SetStatistic - Class in si.ijs.kt.clus.ext.structuredTypes
 
SetStatistic(Settings, SetAttrType, ClusDistance, SettingsTimeSeries.TimeSeriesPrototypeComplexity) - Constructor for class si.ijs.kt.clus.ext.structuredTypes.SetStatistic
 
setStatManager(ClusStatManager) - Method in class si.ijs.kt.clus.ext.optiontree.MyNode
 
setStatManager(ClusStatManager) - Method in class si.ijs.kt.clus.main.ClusSummary
 
setStatManager(ClusStatManager) - Method in class si.ijs.kt.clus.model.ClusModelInfo
 
setStatus(ClusAttrType.Status) - Method in class si.ijs.kt.clus.data.type.ClusAttrType
 
setStatus(IntervalCollection, ClusAttrType.Status, boolean) - Method in class si.ijs.kt.clus.data.ClusSchema
 
setStatusAll(ClusAttrType.Status) - Method in class si.ijs.kt.clus.data.ClusSchema
 
setStopCrit(boolean) - Method in class si.ijs.kt.clus.ext.beamsearch.ClusBeamAttrSelector
 
setStopCriterion(ClusStopCriterion) - Method in class si.ijs.kt.clus.heuristic.ClusHeuristic
 
setStoppingCriteria(SettingsSSL.SSLStoppingCriteria) - Method in class si.ijs.kt.clus.main.settings.section.SettingsSSL
 
setString(String) - Method in class si.ijs.kt.clus.util.jeans.util.MStringTokenizer
 
setSuffix(String) - Method in class si.ijs.kt.clus.main.settings.section.SettingsGeneric
 
setSymbolicFimpHeader(String[]) - Method in class si.ijs.kt.clus.ext.featureRanking.ensemble.ClusEnsembleFeatureRanking
 
setTarget(String) - Method in class si.ijs.kt.clus.main.settings.section.SettingsAttribute
 
setTarget(ClusAttrType[]) - Method in class si.ijs.kt.clus.distance.complex.tuples.SSPDMatrix
 
setTarget(IntervalCollection) - Method in class si.ijs.kt.clus.data.ClusSchema
 
setTargetDistance(double) - Method in class si.ijs.kt.clus.ext.featureRanking.relief.nearestNeighbour.NearestNeighbour
Deprecated.
setTargetStat(ClusStatistic) - Method in class si.ijs.kt.clus.algo.rules.ClusRule
 
setTargetStat(ClusStatistic) - Method in class si.ijs.kt.clus.algo.rules.ClusRuleSet
 
setTargetStat(ClusStatistic) - Method in class si.ijs.kt.clus.algo.tdidt.ClusNode
 
setTargetStat(ClusStatistic) - Method in class si.ijs.kt.clus.ext.optiontree.MyNode
 
setTargetStatistic(ClusStatistic) - Method in class si.ijs.kt.clus.main.ClusStatManager
 
setTest(int, NodeTest) - Method in class si.ijs.kt.clus.algo.rules.ClusRule
 
setTest(NodeTest) - Method in class si.ijs.kt.clus.algo.tdidt.ClusNode
 
setTest(NodeTest) - Method in class si.ijs.kt.clus.ext.optiontree.ClusSplitNode
 
setTest(NodeTest) - Method in class si.ijs.kt.clus.ext.optxval.OptXValGroup
 
setTest(NodeTest) - Method in class si.ijs.kt.clus.ext.optxval.OptXValSplit
 
setTestData(RowData) - Method in interface si.ijs.kt.clus.addon.sit.mtLearner.MTLearner
 
setTestData(RowData) - Method in class si.ijs.kt.clus.addon.sit.mtLearner.MTLearnerImpl
Sets the testdata to test
setTestError(ClusErrorList) - Method in class si.ijs.kt.clus.main.ClusSummary
 
setTestError(ClusErrorList) - Method in class si.ijs.kt.clus.model.ClusModelInfo
 
setTesting(boolean) - Method in class si.ijs.kt.clus.data.rows.DataTuple
 
setTestSet(int) - Method in class si.ijs.kt.clus.data.ClusSchema
 
setTestSet(TupleIterator) - Method in class si.ijs.kt.clus.main.ClusRun
Test set
setTestSet(ClusRun) - Method in class si.ijs.kt.clus.ext.semisupervised.ClusSemiSupervisedInduce
 
setThreshold(double) - Method in class si.ijs.kt.clus.statistic.WHTDStatistic
 
setThresholds(double) - Method in class si.ijs.kt.clus.statistic.ClassificationStat
 
setThresholds(double) - Method in class si.ijs.kt.clus.statistic.WHTDStatistic
 
setThresholds(double[]) - Method in class si.ijs.kt.clus.error.ROCAndPRCurve
 
setThresholds(double[]) - Method in class si.ijs.kt.clus.statistic.ClassificationStat
 
setTimeBudget(int) - Method in class si.ijs.kt.clus.main.settings.section.SettingsEnsemble
 
setTimeSeries(DataTuple, TimeSeries) - Method in class si.ijs.kt.clus.data.type.primitive.TimeSeriesAttrType
 
setTimeSeriesDistance(SettingsTimeSeries.TimeSeriesDistanceMeasure) - Method in class si.ijs.kt.clus.main.settings.section.SettingsTimeSeries
 
Settings - Class in si.ijs.kt.clus.main.settings
All the settings.
Settings() - Constructor for class si.ijs.kt.clus.main.settings.Settings
 
SettingsAttribute - Class in si.ijs.kt.clus.main.settings.section
 
SettingsAttribute(int) - Constructor for class si.ijs.kt.clus.main.settings.section.SettingsAttribute
 
SettingsBase - Class in si.ijs.kt.clus.main.settings
 
SettingsBase(int, String) - Constructor for class si.ijs.kt.clus.main.settings.SettingsBase
 
SettingsBase.YesNo - Enum Class in si.ijs.kt.clus.main.settings
 
SettingsBeamSearch - Class in si.ijs.kt.clus.main.settings.section
 
SettingsBeamSearch(int) - Constructor for class si.ijs.kt.clus.main.settings.section.SettingsBeamSearch
 
SettingsConstraints - Class in si.ijs.kt.clus.main.settings.section
 
SettingsConstraints(int) - Constructor for class si.ijs.kt.clus.main.settings.section.SettingsConstraints
 
SettingsData - Class in si.ijs.kt.clus.main.settings.section
 
SettingsData(int) - Constructor for class si.ijs.kt.clus.main.settings.section.SettingsData
 
SettingsData.NormalizeDataValues - Enum Class in si.ijs.kt.clus.main.settings.section
 
SettingsEnsemble - Class in si.ijs.kt.clus.main.settings.section
 
SettingsEnsemble(int) - Constructor for class si.ijs.kt.clus.main.settings.section.SettingsEnsemble
 
SettingsEnsemble.EnsembleBootstrapping - Enum Class in si.ijs.kt.clus.main.settings.section
Section: Ensemble methods *
SettingsEnsemble.EnsembleMethod - Enum Class in si.ijs.kt.clus.main.settings.section
 
SettingsEnsemble.EnsembleRanking - Enum Class in si.ijs.kt.clus.main.settings.section
 
SettingsEnsemble.EnsembleROSAlgorithmType - Enum Class in si.ijs.kt.clus.main.settings.section
 
SettingsEnsemble.EnsembleROSVotingType - Enum Class in si.ijs.kt.clus.main.settings.section
How ROS ensemble make predictions
SettingsEnsemble.EnsembleVotingType - Enum Class in si.ijs.kt.clus.main.settings.section
 
SettingsEnsemble.RandomAttributeTypeSelection - Enum Class in si.ijs.kt.clus.main.settings.section
 
SettingsExhaustiveSearch - Class in si.ijs.kt.clus.main.settings.section
 
SettingsExhaustiveSearch(int) - Constructor for class si.ijs.kt.clus.main.settings.section.SettingsExhaustiveSearch
 
SettingsExperimental - Class in si.ijs.kt.clus.main.settings.section
 
SettingsExperimental(int) - Constructor for class si.ijs.kt.clus.main.settings.section.SettingsExperimental
 
SettingsGeneral - Class in si.ijs.kt.clus.main.settings.section
 
SettingsGeneral(int) - Constructor for class si.ijs.kt.clus.main.settings.section.SettingsGeneral
 
SettingsGeneral.ResourceInfoLoad - Enum Class in si.ijs.kt.clus.main.settings.section
Section: General - ResourceInfo loaded *
SettingsGeneric - Class in si.ijs.kt.clus.main.settings.section
 
SettingsGeneric(SettingsOutput) - Constructor for class si.ijs.kt.clus.main.settings.section.SettingsGeneric
 
SettingsHMLC - Class in si.ijs.kt.clus.main.settings.section
 
SettingsHMLC(int) - Constructor for class si.ijs.kt.clus.main.settings.section.SettingsHMLC
 
SettingsHMLC.HierarchyDistance - Enum Class in si.ijs.kt.clus.main.settings.section
 
SettingsHMLC.HierarchyMeasures - Enum Class in si.ijs.kt.clus.main.settings.section
 
SettingsHMLC.HierarchyType - Enum Class in si.ijs.kt.clus.main.settings.section
Section: Hierarchical multi-label classification *
SettingsHMLC.HierarchyWeight - Enum Class in si.ijs.kt.clus.main.settings.section
 
SettingsHMTR - Class in si.ijs.kt.clus.main.settings.section
 
SettingsHMTR(int, SettingsAttribute, SettingsGeneral) - Constructor for class si.ijs.kt.clus.main.settings.section.SettingsHMTR
 
SettingsHMTR.HierarchyAggregationsHMTR - Enum Class in si.ijs.kt.clus.main.settings.section
 
SettingsHMTR.HierarchyDistanceHMTR - Enum Class in si.ijs.kt.clus.main.settings.section
 
SettingsHMTR.HierarchyTypesHMTR - Enum Class in si.ijs.kt.clus.main.settings.section
Section: Hierarchical multi-target regression *
SettingsILevelC - Class in si.ijs.kt.clus.main.settings.section
 
SettingsILevelC(int) - Constructor for class si.ijs.kt.clus.main.settings.section.SettingsILevelC
 
SettingsKNN - Class in si.ijs.kt.clus.main.settings.section
 
SettingsKNN(int) - Constructor for class si.ijs.kt.clus.main.settings.section.SettingsKNN
 
SettingsKNN.Distance - Enum Class in si.ijs.kt.clus.main.settings.section
 
SettingsKNN.DistanceWeights - Enum Class in si.ijs.kt.clus.main.settings.section
 
SettingsKNN.SearchMethod - Enum Class in si.ijs.kt.clus.main.settings.section
 
SettingsKNNTree - Class in si.ijs.kt.clus.main.settings.section
 
SettingsKNNTree(int) - Constructor for class si.ijs.kt.clus.main.settings.section.SettingsKNNTree
 
SettingsMLC - Class in si.ijs.kt.clus.main.settings.section
 
SettingsMLC(int, SettingsHMLC, SettingsRelief) - Constructor for class si.ijs.kt.clus.main.settings.section.SettingsMLC
 
SettingsMLC.MultiLabelMeasures - Enum Class in si.ijs.kt.clus.main.settings.section
 
SettingsMLC.MultiLabelThresholdOptimization - Enum Class in si.ijs.kt.clus.main.settings.section
 
SettingsModel - Class in si.ijs.kt.clus.main.settings.section
 
SettingsModel(int) - Constructor for class si.ijs.kt.clus.main.settings.section.SettingsModel
 
SettingsNominal - Class in si.ijs.kt.clus.main.settings.section
 
SettingsNominal(int) - Constructor for class si.ijs.kt.clus.main.settings.section.SettingsNominal
 
SettingsOptionTree - Class in si.ijs.kt.clus.main.settings.section
 
SettingsOptionTree(int) - Constructor for class si.ijs.kt.clus.main.settings.section.SettingsOptionTree
 
SettingsOutput - Class in si.ijs.kt.clus.main.settings.section
 
SettingsOutput(int) - Constructor for class si.ijs.kt.clus.main.settings.section.SettingsOutput
 
SettingsOutput.ConvertRules - Enum Class in si.ijs.kt.clus.main.settings.section
 
SettingsOutput.PythonModelType - Enum Class in si.ijs.kt.clus.main.settings.section
 
SettingsOutput.ShowInfo - Enum Class in si.ijs.kt.clus.main.settings.section
 
SettingsOutput.ShowModels - Enum Class in si.ijs.kt.clus.main.settings.section
Section: Output - Show info in .out file *
SettingsOutput.WritePredictions - Enum Class in si.ijs.kt.clus.main.settings.section
Section: Output - Write predictions to file *
SettingsPhylogeny - Class in si.ijs.kt.clus.main.settings.section
 
SettingsPhylogeny(int) - Constructor for class si.ijs.kt.clus.main.settings.section.SettingsPhylogeny
 
SettingsPhylogeny.PhylogenyCriterion - Enum Class in si.ijs.kt.clus.main.settings.section
 
SettingsPhylogeny.PhylogenyDistanceMeasure - Enum Class in si.ijs.kt.clus.main.settings.section
Section: Phylogeny *
SettingsPhylogeny.PhylogenySequence - Enum Class in si.ijs.kt.clus.main.settings.section
 
SettingsRelief - Class in si.ijs.kt.clus.main.settings.section
 
SettingsRelief(int) - Constructor for class si.ijs.kt.clus.main.settings.section.SettingsRelief
 
SettingsRelief.MissingTargetHandling - Enum Class in si.ijs.kt.clus.main.settings.section
 
SettingsRelief.MultilabelDistance - Enum Class in si.ijs.kt.clus.main.settings.section
 
SettingsRelief.ReliefStatisticsType - Enum Class in si.ijs.kt.clus.main.settings.section
 
SettingsRules - Class in si.ijs.kt.clus.main.settings.section
 
SettingsRules(int) - Constructor for class si.ijs.kt.clus.main.settings.section.SettingsRules
 
SettingsRules.CoveringMethod - Enum Class in si.ijs.kt.clus.main.settings.section
 
SettingsRules.GDExternalMethodValues - Enum Class in si.ijs.kt.clus.main.settings.section
For external GD binary, do we use GD or brute force method
SettingsRules.InitialRuleGeneratingMethod - Enum Class in si.ijs.kt.clus.main.settings.section
How the initial rules are generated when using SampledRuleSet covering method
SettingsRules.OptimizationGDAddLinearTerms - Enum Class in si.ijs.kt.clus.main.settings.section
 
SettingsRules.OptimizationGDMTCombineGradient - Enum Class in si.ijs.kt.clus.main.settings.section
GD optimization.
SettingsRules.OptimizationLinearTermNormalizeValues - Enum Class in si.ijs.kt.clus.main.settings.section
 
SettingsRules.OptimizationLossFunction - Enum Class in si.ijs.kt.clus.main.settings.section
WEIGHT OPTIMIZATION Differential evolution algorithm
SettingsRules.OptimizationNormalization - Enum Class in si.ijs.kt.clus.main.settings.section
 
SettingsRules.RuleAddingMethod - Enum Class in si.ijs.kt.clus.main.settings.section
 
SettingsRules.RulePredictionMethod - Enum Class in si.ijs.kt.clus.main.settings.section
 
SettingsSIT - Class in si.ijs.kt.clus.main.settings.section
 
SettingsSIT(int) - Constructor for class si.ijs.kt.clus.main.settings.section.SettingsSIT
 
SettingsSSL - Class in si.ijs.kt.clus.main.settings.section
 
SettingsSSL(int) - Constructor for class si.ijs.kt.clus.main.settings.section.SettingsSSL
 
SettingsSSL.SSLAggregation - Enum Class in si.ijs.kt.clus.main.settings.section
Aggregation of per target reliability scores
SettingsSSL.SSLConfidenceMeasure - Enum Class in si.ijs.kt.clus.main.settings.section
Confidence (i.e., reliability) score for Self-Training
SettingsSSL.SSLMethod - Enum Class in si.ijs.kt.clus.main.settings.section
 
SettingsSSL.SSLNormalization - Enum Class in si.ijs.kt.clus.main.settings.section
Normalization of per target reliability scores
SettingsSSL.SSLOOBErrorCalculation - Enum Class in si.ijs.kt.clus.main.settings.section
Specifies which data will be used for calculation of OOB error, only originally labeled data or all examples (including the ones with predicted labeles with Self-training
SettingsSSL.SSLStoppingCriteria - Enum Class in si.ijs.kt.clus.main.settings.section
Stopping criteria for self training
SettingsSSL.SSLUnlabeledCriteria - Enum Class in si.ijs.kt.clus.main.settings.section
unlabeled criteria is the criteria by which the unlabeled data will be added to the training set (used by the Self Training algorithm)
SettingsTimeSeries - Class in si.ijs.kt.clus.main.settings.section
 
SettingsTimeSeries(int) - Constructor for class si.ijs.kt.clus.main.settings.section.SettingsTimeSeries
 
SettingsTimeSeries.TimeSeriesDistanceMeasure - Enum Class in si.ijs.kt.clus.main.settings.section
Section: Time series *
SettingsTimeSeries.TimeSeriesPrototypeComplexity - Enum Class in si.ijs.kt.clus.main.settings.section
 
SettingsTree - Class in si.ijs.kt.clus.main.settings.section
 
SettingsTree(int) - Constructor for class si.ijs.kt.clus.main.settings.section.SettingsTree
 
SettingsTree.EntropyType - Enum Class in si.ijs.kt.clus.main.settings.section
 
SettingsTree.Heuristic - Enum Class in si.ijs.kt.clus.main.settings.section
Section: Tree - Heuristic *
SettingsTree.InductionOrder - Enum Class in si.ijs.kt.clus.main.settings.section
 
SettingsTree.MissingClusteringAttributeHandlingType - Enum Class in si.ijs.kt.clus.main.settings.section
Determines how we handle the case where when searching evaluating candidate split all examples have only missing values for a clustering attriute, in one of the branches.
SettingsTree.MissingTargetAttributeHandlingType - Enum Class in si.ijs.kt.clus.main.settings.section
 
SettingsTree.PruningMethod - Enum Class in si.ijs.kt.clus.main.settings.section
Section: Tree - Pruning method *
SettingsTree.SetDistance - Enum Class in si.ijs.kt.clus.main.settings.section
Section: Tree - SetDistance *
SettingsTree.SpatialMatrixType - Enum Class in si.ijs.kt.clus.main.settings.section
 
SettingsTree.SpatialMeasure - Enum Class in si.ijs.kt.clus.main.settings.section
 
SettingsTree.SplitPositions - Enum Class in si.ijs.kt.clus.main.settings.section
 
SettingsTree.TimeSeriesDistanceMeasure - Enum Class in si.ijs.kt.clus.main.settings.section
Section: Tree - TimeSeriesDistance *
SettingsTree.TreeOptimizeValues - Enum Class in si.ijs.kt.clus.main.settings.section
Section: Tree *
SettingsTree.TupleDistance - Enum Class in si.ijs.kt.clus.main.settings.section
Section: Tree - TupleDistance *
setToAllMultiLabelRankingMeasures() - Method in class si.ijs.kt.clus.main.settings.section.SettingsMLC
 
setToMissing(DataTuple) - Method in class si.ijs.kt.clus.data.type.ClusAttrType
 
setToMissing(DataTuple) - Method in class si.ijs.kt.clus.data.type.hierarchies.ClassesAttrType
 
setToMissing(DataTuple) - Method in class si.ijs.kt.clus.data.type.primitive.NominalAttrType
 
setToMissing(DataTuple) - Method in class si.ijs.kt.clus.data.type.primitive.NumericAttrType
 
setTotalRuns(int) - Method in class si.ijs.kt.clus.main.ClusSummary
 
setTotalWeight(double) - Method in class si.ijs.kt.clus.ext.beamsearch.ClusBeamSearch
 
setTotalWeight(double) - Method in class si.ijs.kt.clus.ext.exhaustivesearch.ClusExhaustiveSearch
 
setTrainData(RowData) - Method in class si.ijs.kt.clus.heuristic.ClusHeuristic
 
setTrainDataHeurValue(double) - Method in class si.ijs.kt.clus.heuristic.ClusHeuristic
 
setTrainError(ClusErrorList) - Method in class si.ijs.kt.clus.main.ClusSummary
 
setTrainError(ClusErrorList) - Method in class si.ijs.kt.clus.model.ClusModelInfo
 
setTrainErrorScore() - Method in class si.ijs.kt.clus.algo.rules.ClusRule
Calculates TrainErrorScore - average of error rates across all target attributes on the all training data covered by this rule (kind of ...).
setTrainErrorScore() - Method in class si.ijs.kt.clus.algo.rules.ClusRuleSet
Sets TrainErrorScore in all rules which is to be used in some schemes (AccuracyWeighted) for combining predictions of multiple (unordered) rules.
setTraining(boolean) - Method in class si.ijs.kt.clus.data.rows.DataTuple
 
setTrainingData(RowData) - Method in class si.ijs.kt.clus.pruning.C45Pruner
 
setTrainingData(RowData) - Method in class si.ijs.kt.clus.pruning.EncodingCostPruning
 
setTrainingData(RowData) - Method in class si.ijs.kt.clus.pruning.M5Pruner
 
setTrainingData(RowData) - Method in class si.ijs.kt.clus.pruning.M5PrunerMulti
 
setTrainingData(RowData) - Method in class si.ijs.kt.clus.pruning.PruneTree
 
setTrainingData(RowData) - Method in class si.ijs.kt.clus.pruning.SizeConstraintPruning
 
setTrainingSet(ClusData) - Method in class si.ijs.kt.clus.main.ClusRun
 
setTrainingSet(RowData, int) - Method in class si.ijs.kt.clus.ext.semisupervised.confidence.regression.RForestProximities
 
setTrainingStat(ClusStatistic) - Method in class si.ijs.kt.clus.statistic.ClassificationStat
 
setTrainingStat(ClusStatistic) - Method in class si.ijs.kt.clus.statistic.ClusStatistic
 
setTrainingStat(ClusStatistic) - Method in class si.ijs.kt.clus.statistic.CombStat
 
setTrainingStat(ClusStatistic) - Method in class si.ijs.kt.clus.statistic.CombStatClassRegHier
 
setTrainingStat(ClusStatistic) - Method in class si.ijs.kt.clus.statistic.GISStat
Deprecated.
 
setTrainingStat(ClusStatistic) - Method in class si.ijs.kt.clus.statistic.RegressionStat
 
setTrainingStat(ClusStatistic) - Method in class si.ijs.kt.clus.statistic.WHTDStatistic
 
setTreeMaxDepth(int) - Method in class si.ijs.kt.clus.main.settings.section.SettingsConstraints
For tree to rules procedure, we want to induce a tree without maximum depth
setTreeOffset(double) - Method in class si.ijs.kt.clus.ext.beamsearch.ClusBeamHeuristic
 
setTreeSplitSampling(int) - Method in class si.ijs.kt.clus.main.settings.section.SettingsTree
To find the best split, heuristic can be calculated on a random sample of the training set to conserve time
setTSDistance(SettingsTree.TimeSeriesDistanceMeasure) - Method in class si.ijs.kt.clus.main.settings.section.SettingsTree
 
setTSWeight(double) - Method in class si.ijs.kt.clus.ext.structuredTypes.Tuple
 
setTSWeight(double) - Method in class si.ijs.kt.clus.ext.timeseries.TimeSeries
 
setTuple(DataTuple, int) - Method in class si.ijs.kt.clus.data.rows.RowData
 
setTuple(DataTuple, Tuple) - Method in class si.ijs.kt.clus.data.type.complex.TupleAttrType
 
setTupleDistance(SettingsTree.TupleDistance) - Method in class si.ijs.kt.clus.main.settings.section.SettingsTree
 
setTuples(LinkedList<DataTuple>) - Method in class si.ijs.kt.clus.algo.kNN.methods.kdTree.KDNode
Set tuples belonging to this node.
setType(int) - Static method in class si.ijs.kt.clus.model.processor.ClusEnsemblePredictionWriter
 
setType(ClusAttrType) - Method in class si.ijs.kt.clus.ext.optxval.SoftNumericTest
 
setType(ClusAttrType) - Method in class si.ijs.kt.clus.model.test.ClusRuleConstraintInduceTest
 
setType(ClusAttrType) - Method in class si.ijs.kt.clus.model.test.FakeTest
 
setType(ClusAttrType) - Method in class si.ijs.kt.clus.model.test.NodeTest
 
setType(ClusAttrType) - Method in class si.ijs.kt.clus.model.test.NominalTest
 
setType(ClusAttrType) - Method in class si.ijs.kt.clus.model.test.NumericTest
 
setType(ClusAttrType) - Method in class si.ijs.kt.clus.model.test.SubsetTest
 
setType(ClassesAttrType) - Method in class si.ijs.kt.clus.ext.hierarchical.ClassHierarchy
 
setTypeDefinition(String) - Method in class si.ijs.kt.clus.data.type.ClusAttrType
 
setTypeDefinition(String) - Method in class si.ijs.kt.clus.data.type.complex.SetAttrType
 
setUnknownFreq(double) - Method in class si.ijs.kt.clus.model.test.NodeTest
 
setUnlabeledCriteria(SettingsSSL.SSLUnlabeledCriteria) - Method in class si.ijs.kt.clus.main.settings.section.SettingsSSL
 
setUnlabeledSet(TupleIterator) - Method in class si.ijs.kt.clus.main.ClusRun
Unlabeled set
setValidationError(ClusErrorList) - Method in class si.ijs.kt.clus.main.ClusSummary
 
setValidationError(ClusErrorList) - Method in class si.ijs.kt.clus.model.ClusModelInfo
 
setValidationStat(WHTDStatistic) - Method in class si.ijs.kt.clus.statistic.WHTDStatistic
 
setValue(boolean) - Method in class si.ijs.kt.clus.util.jeans.io.ini.INIFileBool
 
setValue(double) - Method in class si.ijs.kt.clus.ext.beamsearch.ClusBeamModel
 
setValue(double) - Method in class si.ijs.kt.clus.util.jeans.io.ini.INIFileDouble
 
setValue(int) - Method in class si.ijs.kt.clus.util.jeans.io.ini.INIFileInt
 
setValue(int) - Method in class si.ijs.kt.clus.util.jeans.util.compound.IntObject
 
setValue(int, double) - Method in class si.ijs.kt.clus.ext.timeseries.TimeSeries
 
setValue(int, int) - Method in class si.ijs.kt.clus.data.type.primitive.IndexAttrType
 
setValue(int, int) - Method in class si.ijs.kt.clus.model.test.SubsetTest
 
setValue(int, Object) - Method in class si.ijs.kt.clus.ext.structuredTypes.Tuple
 
setValue(int, String) - Method in class si.ijs.kt.clus.data.type.primitive.NominalAttrType
 
setValue(String) - Method in class si.ijs.kt.clus.util.jeans.io.ini.INIFileArray
 
setValue(String) - Method in class si.ijs.kt.clus.util.jeans.io.ini.INIFileBool
 
setValue(String) - Method in class si.ijs.kt.clus.util.jeans.io.ini.INIFileDouble
 
setValue(String) - Method in class si.ijs.kt.clus.util.jeans.io.ini.INIFileEntry
 
setValue(String) - Method in class si.ijs.kt.clus.util.jeans.io.ini.INIFileEnum
 
setValue(String) - Method in class si.ijs.kt.clus.util.jeans.io.ini.INIFileEnumList
 
setValue(String) - Method in class si.ijs.kt.clus.util.jeans.io.ini.INIFileInt
 
setValue(String) - Method in class si.ijs.kt.clus.util.jeans.io.ini.INIFileNominal
 
setValue(String) - Method in class si.ijs.kt.clus.util.jeans.io.ini.INIFileNominalOrDoubleOrVector
 
setValue(String) - Method in class si.ijs.kt.clus.util.jeans.io.ini.INIFileNominalOrIntOrVector
 
setValue(String) - Method in class si.ijs.kt.clus.util.jeans.io.ini.INIFileString
 
setValue(String) - Method in class si.ijs.kt.clus.util.jeans.io.ini.INIFileStringOrDouble
 
setValue(String) - Method in class si.ijs.kt.clus.util.jeans.io.ini.INIFileStringOrInt
 
setValue(List<T>) - Method in class si.ijs.kt.clus.util.jeans.io.ini.INIFileEnumList
 
setValue(DataTuple, ClassesTuple) - Method in class si.ijs.kt.clus.data.type.hierarchies.ClassesAttrType
 
setValue(T) - Method in class si.ijs.kt.clus.util.jeans.io.ini.INIFileEnum
 
setValueCheck(ValueCheck) - Method in class si.ijs.kt.clus.util.jeans.io.ini.INIFileDouble
 
setValueCheck(ValueCheck) - Method in class si.ijs.kt.clus.util.jeans.io.ini.INIFileInt
 
setValues(double[]) - Method in class si.ijs.kt.clus.ext.timeseries.TimeSeries
 
setValues(int[]) - Method in class si.ijs.kt.clus.util.jeans.io.ini.INIFileNominal
 
setValues(Object[]) - Method in class si.ijs.kt.clus.ext.structuredTypes.Set
 
setValues(Object[]) - Method in class si.ijs.kt.clus.ext.structuredTypes.Tuple
 
setVariance(double) - Method in class si.ijs.kt.clus.algo.kNN.distance.valentin.NumericStatistic
 
setVector(int) - Method in class si.ijs.kt.clus.util.jeans.io.ini.INIFileNominalOrDoubleOrVector
 
setVector(int) - Method in class si.ijs.kt.clus.util.jeans.io.ini.INIFileNominalOrIntOrVector
 
setVerbose(boolean) - Method in class si.ijs.kt.clus.ext.beamsearch.ClusBeamSearch
 
setVerbose(boolean) - Method in class si.ijs.kt.clus.ext.exhaustivesearch.ClusExhaustiveSearch
 
setVisitor(Object) - Method in class si.ijs.kt.clus.algo.rules.ClusRule
 
setVisitor(Object) - Method in class si.ijs.kt.clus.algo.tdidt.ClusNode
 
setVisitor(Object, int) - Method in class si.ijs.kt.clus.util.jeans.util.Visitable
 
setVotes(ArrayList) - Static method in class si.ijs.kt.clus.model.processor.ClusEnsemblePredictionWriter
 
setWeight(double) - Method in class si.ijs.kt.clus.data.rows.DataTuple
 
setWeight(int, double) - Method in class si.ijs.kt.clus.data.attweights.ClusAttributeWeights
 
setWeight(ClusAttrType, double) - Method in class si.ijs.kt.clus.data.attweights.ClusAttributeWeights
 
setWeighting(AttributeWeighting) - Method in class si.ijs.kt.clus.distance.ClusDistance
 
setWeights(double[]) - Method in class si.ijs.kt.clus.algo.rules.probabilistic.ClusRuleProbabilisticRuleSetInduceWeights
 
setWeights(ClusAttributeWeights) - Method in class si.ijs.kt.clus.error.common.ClusError
 
setWeights(ClusAttributeWeights) - Method in class si.ijs.kt.clus.error.common.ClusErrorList
 
setWeights(ClusAttributeWeights) - Method in class si.ijs.kt.clus.error.MSError
 
setWeights(ClusAttributeWeights) - Method in class si.ijs.kt.clus.error.sets.Accuracy
 
setWeights(ClusAttributeWeights) - Method in class si.ijs.kt.clus.error.sets.F1Score
 
setWeights(ClusAttributeWeights) - Method in class si.ijs.kt.clus.error.sets.HammingLossError
 
setWeights(ClusAttributeWeights) - Method in class si.ijs.kt.clus.error.sets.Precision
 
setWeights(ClusAttributeWeights) - Method in class si.ijs.kt.clus.error.sets.Recall
 
setWeights(ClusAttributeWeights) - Method in class si.ijs.kt.clus.error.sets.SubsetAccuracy
 
setWeights(ClusAttributeWeights, ClusAttrType[], double) - Method in class si.ijs.kt.clus.ext.semisupervised.ClusSemiSupervisedPCTs
 
setWriteOOBFile(boolean) - Method in class si.ijs.kt.clus.main.settings.section.SettingsOutput
 
setX(double) - Method in class si.ijs.kt.clus.util.jeans.math.SingleStatList
 
setXValFolds(int) - Method in class si.ijs.kt.clus.main.settings.section.SettingsData
 
setY(double) - Method in class si.ijs.kt.clus.util.jeans.math.SingleStatList
 
severe(String) - Static method in class si.ijs.kt.clus.util.ClusLogger
 
shallowClone(T) - Method in class si.ijs.kt.clus.util.cloner.Cloner
shallow clones "o".
shallowCloneData() - Method in class si.ijs.kt.clus.data.rows.RowData
 
shared() - Static method in class si.ijs.kt.clus.util.cloner.Cloner
 
shouldAttach() - Method in class si.ijs.kt.clus.data.rows.TupleIterator
 
shouldBeLow() - Method in class si.ijs.kt.clus.error.AbsoluteError
 
shouldBeLow() - Method in class si.ijs.kt.clus.error.Accuracy
 
shouldBeLow() - Method in class si.ijs.kt.clus.error.AvgDistancesError
 
shouldBeLow() - Method in class si.ijs.kt.clus.error.ClusSumError
 
shouldBeLow() - Method in class si.ijs.kt.clus.error.common.ClusError
Should this error be minimized (e.g.
shouldBeLow() - Method in class si.ijs.kt.clus.error.common.multiscore.MultiScoreWrapper
 
shouldBeLow() - Method in class si.ijs.kt.clus.error.ContingencyTable
 
shouldBeLow() - Method in class si.ijs.kt.clus.error.hmlc.HierClassWiseAccuracy
 
shouldBeLow() - Method in class si.ijs.kt.clus.error.hmlc.HierErrorMeasures
 
shouldBeLow() - Method in class si.ijs.kt.clus.error.hmlc.HierLevelAccuracy
 
shouldBeLow() - Method in class si.ijs.kt.clus.error.ICVPairwiseDistancesError
 
shouldBeLow() - Method in class si.ijs.kt.clus.error.MisclassificationError
 
shouldBeLow() - Method in class si.ijs.kt.clus.error.mlc.AveragePrecision
 
shouldBeLow() - Method in class si.ijs.kt.clus.error.mlc.Coverage
 
shouldBeLow() - Method in class si.ijs.kt.clus.error.mlc.HammingLoss
 
shouldBeLow() - Method in class si.ijs.kt.clus.error.mlc.MacroFOne
 
shouldBeLow() - Method in class si.ijs.kt.clus.error.mlc.MacroPrecision
 
shouldBeLow() - Method in class si.ijs.kt.clus.error.mlc.MacroRecall
 
shouldBeLow() - Method in class si.ijs.kt.clus.error.mlc.MicroFOne
 
shouldBeLow() - Method in class si.ijs.kt.clus.error.mlc.MicroPrecision
 
shouldBeLow() - Method in class si.ijs.kt.clus.error.mlc.MicroRecall
 
shouldBeLow() - Method in class si.ijs.kt.clus.error.mlc.MLAccuracy
 
shouldBeLow() - Method in class si.ijs.kt.clus.error.mlc.MLFOneMeasure
 
shouldBeLow() - Method in class si.ijs.kt.clus.error.mlc.MLPrecision
 
shouldBeLow() - Method in class si.ijs.kt.clus.error.mlc.MLRecall
 
shouldBeLow() - Method in class si.ijs.kt.clus.error.mlc.MLROCAndPRCurve
 
shouldBeLow() - Method in class si.ijs.kt.clus.error.mlc.OneError
 
shouldBeLow() - Method in class si.ijs.kt.clus.error.mlc.RankingLoss
 
shouldBeLow() - Method in class si.ijs.kt.clus.error.mlc.SubsetAccuracy
 
shouldBeLow() - Method in class si.ijs.kt.clus.error.mlcForHmlc.MlcMeasuresForHmlc
 
shouldBeLow() - Method in class si.ijs.kt.clus.error.MSError
 
shouldBeLow() - Method in class si.ijs.kt.clus.error.MSNominalError
 
shouldBeLow() - Method in class si.ijs.kt.clus.error.NominalCorrelation
 
shouldBeLow() - Method in class si.ijs.kt.clus.error.PearsonCorrelation
 
shouldBeLow() - Method in class si.ijs.kt.clus.error.RelativeError
 
shouldBeLow() - Method in class si.ijs.kt.clus.error.sets.Accuracy
 
shouldBeLow() - Method in class si.ijs.kt.clus.error.sets.F1Score
 
shouldBeLow() - Method in class si.ijs.kt.clus.error.sets.HammingLossError
 
shouldBeLow() - Method in class si.ijs.kt.clus.error.sets.Precision
 
shouldBeLow() - Method in class si.ijs.kt.clus.error.sets.Recall
 
shouldBeLow() - Method in class si.ijs.kt.clus.error.sets.SubsetAccuracy
 
shouldBeLow() - Method in class si.ijs.kt.clus.error.SpearmanRankCorrelation
 
shouldBeLow() - Method in class si.ijs.kt.clus.error.SpearmanRankCorrelationPerExample
 
shouldBeLow() - Method in class si.ijs.kt.clus.error.WAHNDError
 
shouldBeLow() - Method in class si.ijs.kt.clus.ext.ilevelc.ILevelCRandIndex
 
shouldBeLow() - Method in class si.ijs.kt.clus.ext.timeseries.TimeSeriesSignificantChangeTesterXVAL
 
shouldCalibrateHmcThreshold() - Method in class si.ijs.kt.clus.main.settings.section.SettingsSSL
Should calibrate HMC threshold so that the difference between label cardinality of labeled examples and predicted unlabeled examples is minimal
shouldComputeSpearman() - Method in class si.ijs.kt.clus.main.settings.section.SettingsOutput
 
shouldEstimate(double, double) - Method in class si.ijs.kt.clus.statistic.RegressionStat
Should the variance be calculated, or estimated (for example if all examples have missing values)
shouldEstimateOOB() - Method in class si.ijs.kt.clus.main.settings.section.SettingsEnsemble
 
shouldForceInternalXVal() - Method in class si.ijs.kt.clus.main.settings.section.SettingsSSL
 
shouldInduceMain() - Method in class si.ijs.kt.clus.main.settings.section.SettingsSSL
 
shouldLoadNeighbours() - Method in class si.ijs.kt.clus.main.settings.section.SettingsKNN
 
shouldOptimizeEnsemble() - Method in class si.ijs.kt.clus.main.settings.section.SettingsEnsemble
 
shouldPerformRanking() - Method in class si.ijs.kt.clus.main.settings.section.SettingsEnsemble
 
shouldPerformRankingPerTarget() - Method in class si.ijs.kt.clus.main.settings.section.SettingsEnsemble
 
shouldProcessModel(ClusModelInfo) - Method in class si.ijs.kt.clus.model.processor.ClusModelProcessor
 
shouldProcessModel(ClusModelInfo) - Method in class si.ijs.kt.clus.model.processor.PredictionWriter
 
shouldPruneInvalid() - Method in class si.ijs.kt.clus.model.ClusModelInfo
 
shouldRunThresholdOptimization() - Method in class si.ijs.kt.clus.main.settings.section.SettingsMLC
 
shouldSave() - Method in class si.ijs.kt.clus.model.ClusModelInfo
 
shouldSaveNeighbours() - Method in class si.ijs.kt.clus.main.settings.section.SettingsKNN
 
shouldShowModel(int) - Method in class si.ijs.kt.clus.main.settings.section.SettingsOutput
 
shouldShowThresholds() - Method in class si.ijs.kt.clus.main.settings.section.SettingsMLC
 
shouldShowThresholds(String) - Method in class si.ijs.kt.clus.main.settings.section.SettingsMLC
 
shouldSortRankingByRelevance() - Method in class si.ijs.kt.clus.main.settings.section.SettingsEnsemble
 
shouldUseIndicesInNames() - Method in class si.ijs.kt.clus.main.settings.section.SettingsRelief
 
shouldWritePerBagModelFiles() - Method in class si.ijs.kt.clus.main.settings.section.SettingsOutput
 
shouldWritePredictions() - Method in class si.ijs.kt.clus.model.ClusModelInfo
 
shouldWritePredictionsFromEnsemble() - Method in class si.ijs.kt.clus.main.settings.section.SettingsEnsemble
 
show() - Static method in class si.ijs.kt.clus.main.ClusStat
 
show(PrintWriter) - Method in class si.ijs.kt.clus.main.settings.Settings
 
SHOW_BRANCH_FREQ - Static variable in class si.ijs.kt.clus.main.settings.section.SettingsOutput
 
SHOW_DISTRIBUTION - Variable in class si.ijs.kt.clus.statistic.StatisticPrintInfo
 
SHOW_EXAMPLE_COUNT - Variable in class si.ijs.kt.clus.statistic.StatisticPrintInfo
 
SHOW_EXAMPLE_COUNT_BYTARGET - Variable in class si.ijs.kt.clus.statistic.StatisticPrintInfo
 
SHOW_INDEX - Variable in class si.ijs.kt.clus.statistic.StatisticPrintInfo
 
SHOW_INDUCE_PROGRESS - Static variable in class si.ijs.kt.clus.algo.tdidt.DepthFirstInduce
 
SHOW_KEY - Variable in class si.ijs.kt.clus.statistic.StatisticPrintInfo
 
SHOW_UNKNOWN_FREQ - Static variable in class si.ijs.kt.clus.main.settings.section.SettingsOutput
 
SHOW_XVAL_FOREST - Static variable in class si.ijs.kt.clus.main.settings.section.SettingsExperimental
Cross-validaiton *
showAccuracy(PrintWriter, int) - Method in class si.ijs.kt.clus.error.ContingencyTable
 
showAlternatives(PrintWriter) - Method in class si.ijs.kt.clus.algo.tdidt.ClusNode
 
showAlternativeSplits() - Method in class si.ijs.kt.clus.main.settings.section.SettingsTree
 
showContTable(PrintWriter, int) - Method in class si.ijs.kt.clus.error.ContingencyTable
 
showDebug() - Method in class si.ijs.kt.clus.Clus
 
showDebug() - Method in class si.ijs.kt.clus.data.ClusSchema
 
showDebug(ClusSchema) - Method in class si.ijs.kt.clus.data.rows.RowData
 
showDefaultError(PrintWriter, boolean) - Method in class si.ijs.kt.clus.error.AbsoluteError
 
showDoubleArray(double[]) - Method in class si.ijs.kt.clus.error.common.ClusError
 
showDoubleArray(double[], double) - Method in class si.ijs.kt.clus.error.common.ClusError
 
showDoubleArray(double[], double[]) - Method in class si.ijs.kt.clus.error.common.ClusError
 
showError(PrintWriter) - Method in class si.ijs.kt.clus.error.common.ClusErrorList
 
showError(ClusModelInfoList, int, String, PrintWriter, Settings) - Method in class si.ijs.kt.clus.error.common.ClusErrorList
 
showErrorBrief(ClusModelInfoList, int, PrintWriter) - Method in class si.ijs.kt.clus.error.common.ClusErrorList
 
showFoldsInfo(PrintWriter, Object) - Static method in class si.ijs.kt.clus.ext.optxval.OptXVal
Deprecated.
 
showForest() - Method in class si.ijs.kt.clus.ext.ensemble.ClusForest
 
showForest(PrintWriter, OptXValNode) - Static method in class si.ijs.kt.clus.ext.optxval.OptXVal
Deprecated.
 
showHelp() - Method in class si.ijs.kt.clus.addon.hmc.ClusAmandaRules.ClusAmandaRules
 
showHelp() - Method in class si.ijs.kt.clus.addon.hmc.HMCAverageSingleClass.HMCAverageSingleClass
 
showHelp() - Method in class si.ijs.kt.clus.addon.hmc.HMCNodeWiseModels.hmcnwmodels.HMCNodeWiseModels
 
showHelp() - Method in class si.ijs.kt.clus.addon.sit.Sit
 
showHelp() - Method in class si.ijs.kt.clus.Clus
 
showHelp() - Static method in class si.ijs.kt.clus.util.ClusMisc
 
showHelp() - Method in interface si.ijs.kt.clus.util.jeans.util.cmdline.CMDLineArgsProvider
 
showInfo() - Method in class si.ijs.kt.clus.Clus
 
showModel(String) - Method in class si.ijs.kt.clus.Clus
 
showModelError(PrintWriter, int) - Method in class si.ijs.kt.clus.error.AbsoluteError
 
showModelError(PrintWriter, int) - Method in class si.ijs.kt.clus.error.AvgDistancesError
 
showModelError(PrintWriter, int) - Method in class si.ijs.kt.clus.error.common.ClusError
 
showModelError(PrintWriter, int) - Method in class si.ijs.kt.clus.error.common.multiscore.MultiScoreWrapper
 
showModelError(PrintWriter, int) - Method in class si.ijs.kt.clus.error.ContingencyTable
 
showModelError(PrintWriter, int) - Method in class si.ijs.kt.clus.error.hmlc.HierClassWiseAccuracy
 
showModelError(PrintWriter, int) - Method in class si.ijs.kt.clus.error.hmlc.HierErrorMeasures
 
showModelError(PrintWriter, int) - Method in class si.ijs.kt.clus.error.hmlc.HierLevelAccuracy
 
showModelError(PrintWriter, int) - Method in class si.ijs.kt.clus.error.ICVPairwiseDistancesError
 
showModelError(PrintWriter, int) - Method in class si.ijs.kt.clus.error.mlc.AveragePrecision
 
showModelError(PrintWriter, int) - Method in class si.ijs.kt.clus.error.mlc.Coverage
 
showModelError(PrintWriter, int) - Method in class si.ijs.kt.clus.error.mlc.HammingLoss
 
showModelError(PrintWriter, int) - Method in class si.ijs.kt.clus.error.mlc.MacroFOne
 
showModelError(PrintWriter, int) - Method in class si.ijs.kt.clus.error.mlc.MacroPrecision
 
showModelError(PrintWriter, int) - Method in class si.ijs.kt.clus.error.mlc.MacroRecall
 
showModelError(PrintWriter, int) - Method in class si.ijs.kt.clus.error.mlc.MicroFOne
 
showModelError(PrintWriter, int) - Method in class si.ijs.kt.clus.error.mlc.MicroPrecision
 
showModelError(PrintWriter, int) - Method in class si.ijs.kt.clus.error.mlc.MicroRecall
 
showModelError(PrintWriter, int) - Method in class si.ijs.kt.clus.error.mlc.MLAccuracy
 
showModelError(PrintWriter, int) - Method in class si.ijs.kt.clus.error.mlc.MLaverageAUPRC
 
showModelError(PrintWriter, int) - Method in class si.ijs.kt.clus.error.mlc.MLaverageAUROC
 
showModelError(PrintWriter, int) - Method in class si.ijs.kt.clus.error.mlc.MLFOneMeasure
 
showModelError(PrintWriter, int) - Method in class si.ijs.kt.clus.error.mlc.MLpooledAUPRC
 
showModelError(PrintWriter, int) - Method in class si.ijs.kt.clus.error.mlc.MLPrecision
 
showModelError(PrintWriter, int) - Method in class si.ijs.kt.clus.error.mlc.MLRecall
 
showModelError(PrintWriter, int) - Method in class si.ijs.kt.clus.error.mlc.MLROCAndPRCurve
 
showModelError(PrintWriter, int) - Method in class si.ijs.kt.clus.error.mlc.MLweightedAUPRC
 
showModelError(PrintWriter, int) - Method in class si.ijs.kt.clus.error.mlc.OneError
 
showModelError(PrintWriter, int) - Method in class si.ijs.kt.clus.error.mlc.RankingLoss
 
showModelError(PrintWriter, int) - Method in class si.ijs.kt.clus.error.mlc.SubsetAccuracy
 
showModelError(PrintWriter, int) - Method in class si.ijs.kt.clus.error.mlcForHmlc.MlcMeasuresForHmlc
 
showModelError(PrintWriter, int) - Method in class si.ijs.kt.clus.error.MSError
 
showModelError(PrintWriter, int) - Method in class si.ijs.kt.clus.error.MSNominalError
 
showModelError(PrintWriter, int) - Method in class si.ijs.kt.clus.error.PearsonCorrelation
Compute Pearson correlation coefficient
showModelError(PrintWriter, int) - Method in class si.ijs.kt.clus.error.RRMSError
 
showModelError(PrintWriter, int) - Method in class si.ijs.kt.clus.error.sets.Accuracy
 
showModelError(PrintWriter, int) - Method in class si.ijs.kt.clus.error.sets.F1Score
 
showModelError(PrintWriter, int) - Method in class si.ijs.kt.clus.error.sets.HammingLossError
 
showModelError(PrintWriter, int) - Method in class si.ijs.kt.clus.error.sets.Precision
 
showModelError(PrintWriter, int) - Method in class si.ijs.kt.clus.error.sets.Recall
 
showModelError(PrintWriter, int) - Method in class si.ijs.kt.clus.error.sets.SubsetAccuracy
 
showModelError(PrintWriter, int) - Method in class si.ijs.kt.clus.error.SpearmanRankCorrelation
 
showModelError(PrintWriter, int) - Method in class si.ijs.kt.clus.error.WAHNDError
 
showModelError(PrintWriter, int) - Method in class si.ijs.kt.clus.ext.ilevelc.ILevelCRandIndex
 
showModelError(PrintWriter, int) - Method in class si.ijs.kt.clus.ext.timeseries.TimeSeriesSignificantChangeTesterXVAL
 
showModelError(PrintWriter, String, int) - Method in class si.ijs.kt.clus.error.common.ClusError
Display
showModelError(PrintWriter, String, int) - Method in class si.ijs.kt.clus.error.hmlc.HierErrorMeasures
 
showModelError(PrintWriter, String, int) - Method in class si.ijs.kt.clus.error.mlcForHmlc.MlcMeasuresForHmlc
 
showModelInfos() - Method in class si.ijs.kt.clus.main.ClusModelInfoList
 
showPath(int[]) - Static method in class si.ijs.kt.clus.util.jeans.tree.MyNode
 
showPath(int[], PrintWriter) - Static method in class si.ijs.kt.clus.util.jeans.tree.MyNode
 
showRelativeError(PrintWriter, boolean) - Method in class si.ijs.kt.clus.error.AbsoluteError
 
showRelativeModelError(PrintWriter, int) - Method in class si.ijs.kt.clus.error.common.ClusError
 
showRootInfo() - Method in class si.ijs.kt.clus.statistic.ClusStatistic
 
showRootInfo() - Method in class si.ijs.kt.clus.statistic.WHTDStatistic
 
showSummary() - Method in class si.ijs.kt.clus.ext.hierarchical.ClassHierarchy
 
showSummaryError(PrintWriter, boolean) - Method in class si.ijs.kt.clus.error.AbsoluteError
 
showSummaryError(PrintWriter, boolean) - Method in class si.ijs.kt.clus.error.Accuracy
 
showSummaryError(PrintWriter, boolean) - Method in class si.ijs.kt.clus.error.ContingencyTable
 
showSummaryError(PrintWriter, boolean) - Method in class si.ijs.kt.clus.error.mlc.AveragePrecision
 
showSummaryError(PrintWriter, boolean) - Method in class si.ijs.kt.clus.error.mlc.Coverage
 
showSummaryError(PrintWriter, boolean) - Method in class si.ijs.kt.clus.error.mlc.HammingLoss
 
showSummaryError(PrintWriter, boolean) - Method in class si.ijs.kt.clus.error.mlc.MacroFOne
 
showSummaryError(PrintWriter, boolean) - Method in class si.ijs.kt.clus.error.mlc.MacroPrecision
 
showSummaryError(PrintWriter, boolean) - Method in class si.ijs.kt.clus.error.mlc.MacroRecall
 
showSummaryError(PrintWriter, boolean) - Method in class si.ijs.kt.clus.error.mlc.MicroFOne
 
showSummaryError(PrintWriter, boolean) - Method in class si.ijs.kt.clus.error.mlc.MicroPrecision
 
showSummaryError(PrintWriter, boolean) - Method in class si.ijs.kt.clus.error.mlc.MicroRecall
 
showSummaryError(PrintWriter, boolean) - Method in class si.ijs.kt.clus.error.mlc.MLAccuracy
 
showSummaryError(PrintWriter, boolean) - Method in class si.ijs.kt.clus.error.mlc.MLFOneMeasure
 
showSummaryError(PrintWriter, boolean) - Method in class si.ijs.kt.clus.error.mlc.MLPrecision
 
showSummaryError(PrintWriter, boolean) - Method in class si.ijs.kt.clus.error.mlc.MLRecall
 
showSummaryError(PrintWriter, boolean) - Method in class si.ijs.kt.clus.error.mlc.MLROCAndPRCurve
 
showSummaryError(PrintWriter, boolean) - Method in class si.ijs.kt.clus.error.mlc.OneError
 
showSummaryError(PrintWriter, boolean) - Method in class si.ijs.kt.clus.error.mlc.RankingLoss
 
showSummaryError(PrintWriter, boolean) - Method in class si.ijs.kt.clus.error.mlc.SubsetAccuracy
 
showSummaryError(PrintWriter, boolean) - Method in class si.ijs.kt.clus.error.MSError
 
showSummaryError(PrintWriter, boolean) - Method in class si.ijs.kt.clus.error.MSNominalError
 
showSummaryError(PrintWriter, boolean) - Method in class si.ijs.kt.clus.error.RMSError
 
showSummaryError(PrintWriter, boolean) - Method in class si.ijs.kt.clus.error.RRMSError
 
showSummaryError(PrintWriter, boolean) - Method in class si.ijs.kt.clus.error.sets.Accuracy
 
showSummaryError(PrintWriter, boolean) - Method in class si.ijs.kt.clus.error.sets.F1Score
 
showSummaryError(PrintWriter, boolean) - Method in class si.ijs.kt.clus.error.sets.HammingLossError
 
showSummaryError(PrintWriter, boolean) - Method in class si.ijs.kt.clus.error.sets.Precision
 
showSummaryError(PrintWriter, boolean) - Method in class si.ijs.kt.clus.error.sets.Recall
 
showSummaryError(PrintWriter, boolean) - Method in class si.ijs.kt.clus.error.sets.SubsetAccuracy
 
showTable() - Method in class si.ijs.kt.clus.data.rows.RowData
 
showTest(NominalAttrType, boolean[], int, double, ClusStatistic, ClusStatistic) - Method in class si.ijs.kt.clus.algo.split.SubsetSplit
 
showValuesForGene(ClusRun, ClusRuleSet, String) - Method in class si.ijs.kt.clus.addon.hmc.ClusAmandaRules.ClusAmandaRules
 
si.ijs.kt.clus - package si.ijs.kt.clus
 
si.ijs.kt.clus.addon.hmc.ClusAmandaRules - package si.ijs.kt.clus.addon.hmc.ClusAmandaRules
 
si.ijs.kt.clus.addon.hmc.HMCAverageSingleClass - package si.ijs.kt.clus.addon.hmc.HMCAverageSingleClass
 
si.ijs.kt.clus.addon.hmc.HMCConvertDAGData - package si.ijs.kt.clus.addon.hmc.HMCConvertDAGData
 
si.ijs.kt.clus.addon.hmc.HMCConvertToSC - package si.ijs.kt.clus.addon.hmc.HMCConvertToSC
 
si.ijs.kt.clus.addon.hmc.HMCNodeWiseModels.hmcnwmodels - package si.ijs.kt.clus.addon.hmc.HMCNodeWiseModels.hmcnwmodels
 
si.ijs.kt.clus.addon.ILevelC.ilevelc - package si.ijs.kt.clus.addon.ILevelC.ilevelc
 
si.ijs.kt.clus.addon.network - package si.ijs.kt.clus.addon.network
 
si.ijs.kt.clus.addon.sit - package si.ijs.kt.clus.addon.sit
 
si.ijs.kt.clus.addon.sit.mtLearner - package si.ijs.kt.clus.addon.sit.mtLearner
 
si.ijs.kt.clus.addon.sit.searchAlgorithm - package si.ijs.kt.clus.addon.sit.searchAlgorithm
 
si.ijs.kt.clus.algo - package si.ijs.kt.clus.algo
 
si.ijs.kt.clus.algo.kNN - package si.ijs.kt.clus.algo.kNN
 
si.ijs.kt.clus.algo.kNN.distance.attributeWeighting - package si.ijs.kt.clus.algo.kNN.distance.attributeWeighting
 
si.ijs.kt.clus.algo.kNN.distance.distanceWeighting - package si.ijs.kt.clus.algo.kNN.distance.distanceWeighting
 
si.ijs.kt.clus.algo.kNN.distance.valentin - package si.ijs.kt.clus.algo.kNN.distance.valentin
 
si.ijs.kt.clus.algo.kNN.methods - package si.ijs.kt.clus.algo.kNN.methods
 
si.ijs.kt.clus.algo.kNN.methods.bfMethod - package si.ijs.kt.clus.algo.kNN.methods.bfMethod
 
si.ijs.kt.clus.algo.kNN.methods.kdTree - package si.ijs.kt.clus.algo.kNN.methods.kdTree
 
si.ijs.kt.clus.algo.kNN.methods.vpTree - package si.ijs.kt.clus.algo.kNN.methods.vpTree
 
si.ijs.kt.clus.algo.rules - package si.ijs.kt.clus.algo.rules
 
si.ijs.kt.clus.algo.rules.probabilistic - package si.ijs.kt.clus.algo.rules.probabilistic
 
si.ijs.kt.clus.algo.rules.tune - package si.ijs.kt.clus.algo.rules.tune
 
si.ijs.kt.clus.algo.split - package si.ijs.kt.clus.algo.split
 
si.ijs.kt.clus.algo.tdidt - package si.ijs.kt.clus.algo.tdidt
 
si.ijs.kt.clus.algo.tdidt.processor - package si.ijs.kt.clus.algo.tdidt.processor
 
si.ijs.kt.clus.algo.tdidt.tune - package si.ijs.kt.clus.algo.tdidt.tune
 
si.ijs.kt.clus.data - package si.ijs.kt.clus.data
 
si.ijs.kt.clus.data.attweights - package si.ijs.kt.clus.data.attweights
 
si.ijs.kt.clus.data.cols - package si.ijs.kt.clus.data.cols
 
si.ijs.kt.clus.data.cols.attribute - package si.ijs.kt.clus.data.cols.attribute
 
si.ijs.kt.clus.data.io - package si.ijs.kt.clus.data.io
 
si.ijs.kt.clus.data.rows - package si.ijs.kt.clus.data.rows
 
si.ijs.kt.clus.data.type - package si.ijs.kt.clus.data.type
 
si.ijs.kt.clus.data.type.complex - package si.ijs.kt.clus.data.type.complex
 
si.ijs.kt.clus.data.type.hierarchies - package si.ijs.kt.clus.data.type.hierarchies
 
si.ijs.kt.clus.data.type.primitive - package si.ijs.kt.clus.data.type.primitive
 
si.ijs.kt.clus.distance - package si.ijs.kt.clus.distance
 
si.ijs.kt.clus.distance.complex - package si.ijs.kt.clus.distance.complex
 
si.ijs.kt.clus.distance.complex.sets - package si.ijs.kt.clus.distance.complex.sets
 
si.ijs.kt.clus.distance.complex.tuples - package si.ijs.kt.clus.distance.complex.tuples
 
si.ijs.kt.clus.distance.hierarchies - package si.ijs.kt.clus.distance.hierarchies
 
si.ijs.kt.clus.distance.primitive - package si.ijs.kt.clus.distance.primitive
 
si.ijs.kt.clus.distance.primitive.nominal - package si.ijs.kt.clus.distance.primitive.nominal
 
si.ijs.kt.clus.distance.primitive.relief - package si.ijs.kt.clus.distance.primitive.relief
 
si.ijs.kt.clus.distance.primitive.timeseries - package si.ijs.kt.clus.distance.primitive.timeseries
 
si.ijs.kt.clus.error - package si.ijs.kt.clus.error
 
si.ijs.kt.clus.error.common - package si.ijs.kt.clus.error.common
 
si.ijs.kt.clus.error.common.multiscore - package si.ijs.kt.clus.error.common.multiscore
 
si.ijs.kt.clus.error.hmlc - package si.ijs.kt.clus.error.hmlc
 
si.ijs.kt.clus.error.mlc - package si.ijs.kt.clus.error.mlc
 
si.ijs.kt.clus.error.mlcForHmlc - package si.ijs.kt.clus.error.mlcForHmlc
 
si.ijs.kt.clus.error.sets - package si.ijs.kt.clus.error.sets
 
si.ijs.kt.clus.ext.beamsearch - package si.ijs.kt.clus.ext.beamsearch
 
si.ijs.kt.clus.ext.bestfirst - package si.ijs.kt.clus.ext.bestfirst
 
si.ijs.kt.clus.ext.constraint - package si.ijs.kt.clus.ext.constraint
 
si.ijs.kt.clus.ext.ensemble - package si.ijs.kt.clus.ext.ensemble
 
si.ijs.kt.clus.ext.ensemble.callable - package si.ijs.kt.clus.ext.ensemble.callable
 
si.ijs.kt.clus.ext.ensemble.container - package si.ijs.kt.clus.ext.ensemble.container
 
si.ijs.kt.clus.ext.ensemble.ros - package si.ijs.kt.clus.ext.ensemble.ros
 
si.ijs.kt.clus.ext.exhaustivesearch - package si.ijs.kt.clus.ext.exhaustivesearch
 
si.ijs.kt.clus.ext.featureRanking - package si.ijs.kt.clus.ext.featureRanking
 
si.ijs.kt.clus.ext.featureRanking.ensemble - package si.ijs.kt.clus.ext.featureRanking.ensemble
 
si.ijs.kt.clus.ext.featureRanking.relief - package si.ijs.kt.clus.ext.featureRanking.relief
 
si.ijs.kt.clus.ext.featureRanking.relief.nearestNeighbour - package si.ijs.kt.clus.ext.featureRanking.relief.nearestNeighbour
 
si.ijs.kt.clus.ext.featureRanking.relief.statistics - package si.ijs.kt.clus.ext.featureRanking.relief.statistics
 
si.ijs.kt.clus.ext.hierarchical - package si.ijs.kt.clus.ext.hierarchical
 
si.ijs.kt.clus.ext.hierarchical.thresholdcalibration - package si.ijs.kt.clus.ext.hierarchical.thresholdcalibration
 
si.ijs.kt.clus.ext.hierarchicalmtr - package si.ijs.kt.clus.ext.hierarchicalmtr
 
si.ijs.kt.clus.ext.ilevelc - package si.ijs.kt.clus.ext.ilevelc
 
si.ijs.kt.clus.ext.imputation - package si.ijs.kt.clus.ext.imputation
 
si.ijs.kt.clus.ext.optiontree - package si.ijs.kt.clus.ext.optiontree
 
si.ijs.kt.clus.ext.optxval - package si.ijs.kt.clus.ext.optxval
 
si.ijs.kt.clus.ext.semisupervised - package si.ijs.kt.clus.ext.semisupervised
 
si.ijs.kt.clus.ext.semisupervised.confidence - package si.ijs.kt.clus.ext.semisupervised.confidence
 
si.ijs.kt.clus.ext.semisupervised.confidence.aggregation - package si.ijs.kt.clus.ext.semisupervised.confidence.aggregation
 
si.ijs.kt.clus.ext.semisupervised.confidence.classification - package si.ijs.kt.clus.ext.semisupervised.confidence.classification
 
si.ijs.kt.clus.ext.semisupervised.confidence.normalization - package si.ijs.kt.clus.ext.semisupervised.confidence.normalization
 
si.ijs.kt.clus.ext.semisupervised.confidence.regression - package si.ijs.kt.clus.ext.semisupervised.confidence.regression
 
si.ijs.kt.clus.ext.semisupervised.utils - package si.ijs.kt.clus.ext.semisupervised.utils
 
si.ijs.kt.clus.ext.structuredTypes - package si.ijs.kt.clus.ext.structuredTypes
 
si.ijs.kt.clus.ext.timeseries - package si.ijs.kt.clus.ext.timeseries
 
si.ijs.kt.clus.heuristic - package si.ijs.kt.clus.heuristic
 
si.ijs.kt.clus.heuristic.hierarchical - package si.ijs.kt.clus.heuristic.hierarchical
 
si.ijs.kt.clus.heuristic.rules - package si.ijs.kt.clus.heuristic.rules
 
si.ijs.kt.clus.heuristic.stopCriterion - package si.ijs.kt.clus.heuristic.stopCriterion
 
si.ijs.kt.clus.main - package si.ijs.kt.clus.main
 
si.ijs.kt.clus.main.settings - package si.ijs.kt.clus.main.settings
 
si.ijs.kt.clus.main.settings.section - package si.ijs.kt.clus.main.settings.section
 
si.ijs.kt.clus.model - package si.ijs.kt.clus.model
 
si.ijs.kt.clus.model.io - package si.ijs.kt.clus.model.io
 
si.ijs.kt.clus.model.processor - package si.ijs.kt.clus.model.processor
 
si.ijs.kt.clus.model.test - package si.ijs.kt.clus.model.test
 
si.ijs.kt.clus.pruning - package si.ijs.kt.clus.pruning
 
si.ijs.kt.clus.selection - package si.ijs.kt.clus.selection
 
si.ijs.kt.clus.statistic - package si.ijs.kt.clus.statistic
 
si.ijs.kt.clus.util - package si.ijs.kt.clus.util
 
si.ijs.kt.clus.util.cloner - package si.ijs.kt.clus.util.cloner
 
si.ijs.kt.clus.util.exception - package si.ijs.kt.clus.util.exception
 
si.ijs.kt.clus.util.format - package si.ijs.kt.clus.util.format
 
si.ijs.kt.clus.util.io - package si.ijs.kt.clus.util.io
 
si.ijs.kt.clus.util.jeans.io - package si.ijs.kt.clus.util.jeans.io
 
si.ijs.kt.clus.util.jeans.io.ini - package si.ijs.kt.clus.util.jeans.io.ini
 
si.ijs.kt.clus.util.jeans.io.range - package si.ijs.kt.clus.util.jeans.io.range
 
si.ijs.kt.clus.util.jeans.list - package si.ijs.kt.clus.util.jeans.list
 
si.ijs.kt.clus.util.jeans.math - package si.ijs.kt.clus.util.jeans.math
 
si.ijs.kt.clus.util.jeans.math.matrix - package si.ijs.kt.clus.util.jeans.math.matrix
 
si.ijs.kt.clus.util.jeans.tree - package si.ijs.kt.clus.util.jeans.tree
 
si.ijs.kt.clus.util.jeans.util - package si.ijs.kt.clus.util.jeans.util
 
si.ijs.kt.clus.util.jeans.util.array - package si.ijs.kt.clus.util.jeans.util.array
 
si.ijs.kt.clus.util.jeans.util.cmdline - package si.ijs.kt.clus.util.jeans.util.cmdline
 
si.ijs.kt.clus.util.jeans.util.compound - package si.ijs.kt.clus.util.jeans.util.compound
 
si.ijs.kt.clus.util.jeans.util.list - package si.ijs.kt.clus.util.jeans.util.list
 
si.ijs.kt.clus.util.jeans.util.sort - package si.ijs.kt.clus.util.jeans.util.sort
 
si.ijs.kt.clus.util.tools - package si.ijs.kt.clus.util.tools
 
si.ijs.kt.clus.util.tools.hier - package si.ijs.kt.clus.util.tools.hier
 
si.ijs.kt.clus.util.tools.manual - package si.ijs.kt.clus.util.tools.manual
 
si.ijs.kt.clus.util.tools.optimization - package si.ijs.kt.clus.util.tools.optimization
 
si.ijs.kt.clus.util.tools.optimization.de - package si.ijs.kt.clus.util.tools.optimization.de
 
si.ijs.kt.clus.util.tools.optimization.gd - package si.ijs.kt.clus.util.tools.optimization.gd
 
si.ijs.kt.clus.util.tools.optimization.sls - package si.ijs.kt.clus.util.tools.optimization.sls
 
si.ijs.kt.clus.util.tools.textproc - package si.ijs.kt.clus.util.tools.textproc
 
si.ijs.kt.clus.util.tuple - package si.ijs.kt.clus.util.tuple
 
signDifferent() - Method in class si.ijs.kt.clus.statistic.CombStat
Returns a number of attributes with significantly different distributions
SIGNIFICANT_DIGITS_IN_PREDICTIONS - Static variable in class si.ijs.kt.clus.ext.ensemble.ClusEnsembleInduceOptimization
 
SimpleClusterModel - Class in si.ijs.kt.clus.ext.ilevelc
 
SimpleClusterModel(int[], ClusStatManager) - Constructor for class si.ijs.kt.clus.ext.ilevelc.SimpleClusterModel
 
SimpleNode - Class in si.ijs.kt.clus.util.jeans.tree
 
SimpleNode() - Constructor for class si.ijs.kt.clus.util.jeans.tree.SimpleNode
 
SimpleNode(Node) - Constructor for class si.ijs.kt.clus.util.jeans.tree.SimpleNode
 
simplify() - Method in class si.ijs.kt.clus.algo.rules.ClusRule
 
simplifyConjunction(NodeTest) - Method in class si.ijs.kt.clus.model.test.NodeTest
 
simplifyConjunction(NodeTest) - Method in class si.ijs.kt.clus.model.test.NumericTest
 
simplifyConjunction(NodeTest) - Method in class si.ijs.kt.clus.model.test.SubsetTest
 
simplifyRules() - Method in class si.ijs.kt.clus.algo.rules.ClusRuleSet
 
singleRun() - Method in class si.ijs.kt.clus.addon.sit.Sit
 
singleRun(ClusInductionAlgorithmType) - Method in class si.ijs.kt.clus.Clus
 
singleRunMain(ClusInductionAlgorithmType, ClusSummary) - Method in class si.ijs.kt.clus.Clus
 
SingleStat - Class in si.ijs.kt.clus.util.jeans.math
 
SingleStat() - Constructor for class si.ijs.kt.clus.util.jeans.math.SingleStat
 
SingleStatList - Class in si.ijs.kt.clus.util.jeans.math
 
SingleStatList(int) - Constructor for class si.ijs.kt.clus.util.jeans.math.SingleStatList
 
Sit - Class in si.ijs.kt.clus.addon.sit
 
SITFitnessFunction - Class in si.ijs.kt.clus.addon.sit.searchAlgorithm
Translates a chromosome to a targetset and evaluates it against the MTLearner
SITFitnessFunction(ClusAttrType, MTLearner, TargetSet) - Constructor for class si.ijs.kt.clus.addon.sit.searchAlgorithm.SITFitnessFunction
 
SIX_AFTER_DOT - Static variable in class si.ijs.kt.clus.util.format.ClusFormat
 
size - Variable in class si.ijs.kt.clus.algo.rules.ClusRuleConstraintInduce
 
size - Variable in class si.ijs.kt.clus.util.jeans.util.IntegerStack
 
size() - Method in class si.ijs.kt.clus.error.BinaryPredictionList
 
size() - Method in class si.ijs.kt.clus.ext.structuredTypes.Set
 
size() - Method in class si.ijs.kt.clus.util.jeans.list.BitList
 
size() - Method in class si.ijs.kt.clus.util.jeans.util.array.MyIntArray
 
size() - Method in class si.ijs.kt.clus.util.jeans.util.MyArray
 
SIZE_PENALTY - Static variable in class si.ijs.kt.clus.main.settings.section.SettingsBeamSearch
 
SizeConstraintPruning - Class in si.ijs.kt.clus.pruning
 
SizeConstraintPruning(int[], ClusAttributeWeights) - Constructor for class si.ijs.kt.clus.pruning.SizeConstraintPruning
 
SizeConstraintPruning(int, ClusAttributeWeights) - Constructor for class si.ijs.kt.clus.pruning.SizeConstraintPruning
 
SizeConstraintVisitor - Class in si.ijs.kt.clus.pruning
 
SizeConstraintVisitor(int) - Constructor for class si.ijs.kt.clus.pruning.SizeConstraintVisitor
 
skipTillComma() - Method in class si.ijs.kt.clus.data.io.ClusReader
 
skipTillCommaOriginal() - Method in class si.ijs.kt.clus.data.io.ClusReader
 
skipTillCommaValentinModified() - Method in class si.ijs.kt.clus.data.io.ClusReader
 
skipTillData() - Method in class si.ijs.kt.clus.data.io.ARFFFile
 
skipTillLine(int) - Method in class si.ijs.kt.clus.util.jeans.util.MStreamTokenizer
 
skipTillLine(String) - Method in class si.ijs.kt.clus.util.jeans.util.MStreamTokenizer
 
SMALL_BUT_MORE_THAN_ZERO - Variable in class si.ijs.kt.clus.ext.ensemble.ClusOOBWeights
 
smallerThan - Variable in class si.ijs.kt.clus.model.test.ClusRuleConstraintInduceTest
 
smartSort(NumericAttrType) - Method in class si.ijs.kt.clus.data.rows.RowData
 
smartSortNonSparse(NumericAttrType) - Method in class si.ijs.kt.clus.data.rows.RowData
 
smartSortSparse(NumericAttrType) - Method in class si.ijs.kt.clus.data.rows.RowData
 
SmoothLocalSearch(ClusRuleSet, double, double, Function<ClusRuleSet, Double>) - Method in class si.ijs.kt.clus.util.tools.optimization.sls.OptSmoothLocalSearch
Smooth Local Search optimization
smOrEq(double, double) - Static method in class si.ijs.kt.clus.util.ClusUtil
 
softEquals(NodeTest) - Method in class si.ijs.kt.clus.model.test.NodeTest
 
softEquals(NodeTest) - Method in class si.ijs.kt.clus.model.test.NumericTest
 
SoftNumericTest - Class in si.ijs.kt.clus.ext.optxval
 
SoftNumericTest(NodeTest, int) - Constructor for class si.ijs.kt.clus.ext.optxval.SoftNumericTest
 
softPredict(RowData, DataTuple, int, int) - Method in class si.ijs.kt.clus.ext.optxval.SoftNumericTest
 
softPredict(RowData, DataTuple, int, int) - Method in class si.ijs.kt.clus.model.test.SoftTest
 
softPredict2(RowData, DataTuple, int, int) - Method in class si.ijs.kt.clus.ext.optxval.SoftNumericTest
 
softPredict2(RowData, DataTuple, int, int) - Method in class si.ijs.kt.clus.model.test.SoftTest
 
softPredictNb(DataTuple, int) - Method in class si.ijs.kt.clus.ext.optxval.SoftNumericTest
 
softPredictNb(DataTuple, int) - Method in class si.ijs.kt.clus.model.test.SoftTest
 
softPredictNb2(DataTuple, int) - Method in class si.ijs.kt.clus.ext.optxval.SoftNumericTest
 
softPredictNb2(DataTuple, int) - Method in class si.ijs.kt.clus.model.test.SoftTest
 
SoftTest - Class in si.ijs.kt.clus.model.test
 
SoftTest() - Constructor for class si.ijs.kt.clus.model.test.SoftTest
 
sort() - Method in class si.ijs.kt.clus.error.BinaryPredictionList
Sorts the jeans.util.compound.DoubleBooleans from the m_ValueSet.
sort() - Method in class si.ijs.kt.clus.ext.optiontree.FindBestTests
 
sort() - Method in class si.ijs.kt.clus.util.jeans.util.MyArray
 
sort() - Method in class si.ijs.kt.clus.util.jeans.util.sort.DoubleIndexSorter
 
sort(double[], boolean) - Static method in class si.ijs.kt.clus.util.tools.optimization.IndexMergeSorter
 
sort(NumericAttrType) - Method in class si.ijs.kt.clus.data.rows.RowData
 
sortChildrenByID() - Method in class si.ijs.kt.clus.ext.hierarchical.ClassTerm
 
sortIntervals() - Method in class si.ijs.kt.clus.ext.optxval.SoftNumericTest
 
sortLabeledFirst() - Method in class si.ijs.kt.clus.data.rows.RowData
Sorts RowData so that the labeled examples come first, unlabeled second
sortModels(ClusRun, ArrayList) - Method in class si.ijs.kt.clus.ext.beamsearch.ClusBeamInduce
Dragi, JSI Sorts the beam according to train accuracy/correlation in descending order In case of equal train accuracy/correlation then the tree with greater heuristic score are put higher
sortPopRandom() - Method in class si.ijs.kt.clus.util.tools.optimization.de.DEPopulation
Take a new random permutation of population individuals.
sortSparse(NumericAttrType, RowDataSortHelper) - Method in class si.ijs.kt.clus.data.rows.RowData
Sorts the instances with respect to the given attribute at, so that
sortSubArray(double[], boolean[], int, boolean) - Static method in class si.ijs.kt.clus.util.tools.optimization.IndexMergeSorter
Consider only the elements that are true in subArray.
SPACE - Static variable in class si.ijs.kt.clus.util.jeans.util.MSStringTokenizer
 
SPACE_TYPES - Static variable in class si.ijs.kt.clus.ext.featureRanking.relief.ClusReliefFeatureRanking
 
spacechars - Variable in class si.ijs.kt.clus.util.jeans.util.MStringTokenizer
 
SparseDataTuple - Class in si.ijs.kt.clus.data.rows
 
SparseDataTuple() - Constructor for class si.ijs.kt.clus.data.rows.SparseDataTuple
 
SparseDataTuple(ClusSchema) - Constructor for class si.ijs.kt.clus.data.rows.SparseDataTuple
 
SparseNumericAttrType - Class in si.ijs.kt.clus.data.type.primitive
 
SparseNumericAttrType(String) - Constructor for class si.ijs.kt.clus.data.type.primitive.SparseNumericAttrType
 
SparseNumericAttrType(NumericAttrType) - Constructor for class si.ijs.kt.clus.data.type.primitive.SparseNumericAttrType
 
SparseNumericAttrType.MySerializable - Class in si.ijs.kt.clus.data.type.primitive
 
SpearmanRankCorrelation - Class in si.ijs.kt.clus.error
 
SpearmanRankCorrelation(ClusErrorList, NumericAttrType[]) - Constructor for class si.ijs.kt.clus.error.SpearmanRankCorrelation
 
SpearmanRankCorrelation(ClusErrorList, NumericAttrType[], String) - Constructor for class si.ijs.kt.clus.error.SpearmanRankCorrelation
 
SpearmanRankCorrelationPerExample - Class in si.ijs.kt.clus.error
This class computes the average spearman rank correlation over all target attributes.
SpearmanRankCorrelationPerExample(ClusErrorList, NumericAttrType[]) - Constructor for class si.ijs.kt.clus.error.SpearmanRankCorrelationPerExample
 
SpearmanRankCorrelationPerExample(ClusErrorList, NumericAttrType[], String) - Constructor for class si.ijs.kt.clus.error.SpearmanRankCorrelationPerExample
 
SPECIAL - Static variable in class si.ijs.kt.clus.util.jeans.util.MSStringTokenizer
 
split(Vector, int, int, MComparator) - Static method in class si.ijs.kt.clus.util.jeans.util.sort.MVectorSorter
 
split(ColTarget) - Method in class si.ijs.kt.clus.data.cols.attribute.ClusAttribute
 
split(ColTarget) - Method in class si.ijs.kt.clus.data.cols.attribute.NominalAttribute
 
split(ColTarget) - Method in class si.ijs.kt.clus.data.cols.attribute.NumericAttribute
 
splitDataIntoValAndTrainSet(ClusStatManager, OptimizationProblem.OptimizationParameter, OptimizationProblem.OptimizationParameter, OptimizationProblem.OptimizationParameter) - Static method in class si.ijs.kt.clus.util.tools.optimization.OptimizationProblem
Splits data into validation and training sets randomly
sqr(double) - Static method in class si.ijs.kt.clus.error.MSError
 
sqr(double) - Static method in class si.ijs.kt.clus.error.MSNominalError
 
sqr(double) - Static method in class si.ijs.kt.clus.error.sets.Accuracy
 
sqr(double) - Static method in class si.ijs.kt.clus.error.sets.F1Score
 
sqr(double) - Static method in class si.ijs.kt.clus.error.sets.HammingLossError
 
sqr(double) - Static method in class si.ijs.kt.clus.error.sets.Precision
 
sqr(double) - Static method in class si.ijs.kt.clus.error.sets.Recall
 
sqr(double) - Static method in class si.ijs.kt.clus.error.sets.SubsetAccuracy
 
Squared - Enum constant in enum class si.ijs.kt.clus.main.settings.section.SettingsRules.OptimizationLossFunction
Optimization Loss function type.
SSPD - Enum constant in enum class si.ijs.kt.clus.main.ClusStatManager.Mode
 
SSPD - Enum constant in enum class si.ijs.kt.clus.main.settings.section.SettingsTree.Heuristic
 
SSPDMatrix - Class in si.ijs.kt.clus.distance.complex.tuples
 
SSPDMatrix(int) - Constructor for class si.ijs.kt.clus.distance.complex.tuples.SSPDMatrix
 
stack - Variable in class si.ijs.kt.clus.util.jeans.util.IntegerStack
 
stackWeight() - Method in class si.ijs.kt.clus.ext.timeseries.TimeSeriesStat
 
standard() - Static method in class si.ijs.kt.clus.util.cloner.Cloner
 
Standard - Enum constant in enum class si.ijs.kt.clus.main.settings.section.SettingsRules.CoveringMethod
Standard covering: ordered rules (decision list)
StandardBootstrap - Enum constant in enum class si.ijs.kt.clus.main.settings.section.SettingsRules.CoveringMethod
Repeated standard covering on bootstraped data
StandardEntropy - Enum constant in enum class si.ijs.kt.clus.main.settings.section.SettingsTree.EntropyType
 
Standardization - Class in si.ijs.kt.clus.ext.semisupervised.confidence.normalization
Standardizes per-target scores to 0.5 mean and 0.125 standard deviation.
Standardization - Enum constant in enum class si.ijs.kt.clus.main.settings.section.SettingsSSL.SSLNormalization
standardization to 0.5 mean and 0.125 standard deviation (ensures that 99.98% of the scores are in [0,1] interval)
Standardization(int) - Constructor for class si.ijs.kt.clus.ext.semisupervised.confidence.normalization.Standardization
 
StandardizedGetis - Enum constant in enum class si.ijs.kt.clus.main.settings.section.SettingsTree.SpatialMeasure
 
startCloning(Class<?>) - Method in interface si.ijs.kt.clus.util.cloner.IDumpCloned
 
startPlayBack() - Method in class si.ijs.kt.clus.model.io.ClusTreeReader
 
startRecording(String) - Method in class si.ijs.kt.clus.model.io.ClusTreeReader
 
StaticRandom - Enum constant in enum class si.ijs.kt.clus.ext.ensemble.ClusEnsembleInduce.ParallelTrap
 
StatisticPrintInfo - Class in si.ijs.kt.clus.statistic
 
StatisticPrintInfo() - Constructor for class si.ijs.kt.clus.statistic.StatisticPrintInfo
 
Statistics - Class in si.ijs.kt.clus.ext.featureRanking.relief.statistics
 
Statistics() - Constructor for class si.ijs.kt.clus.ext.featureRanking.relief.statistics.Statistics
 
statOnData(RowData) - Method in class si.ijs.kt.clus.algo.split.CurrentBestTestAndHeuristic
 
statOnData(RowData) - Method in class si.ijs.kt.clus.ext.optiontree.TestAndHeuristic
 
stblock - Variable in class si.ijs.kt.clus.util.jeans.util.MStringTokenizer
 
STDEV - Enum constant in enum class si.ijs.kt.clus.main.settings.section.SettingsHMTR.HierarchyAggregationsHMTR
 
stDevOpt(double[]) - Static method in class si.ijs.kt.clus.ext.semisupervised.Helper
Calculates standard deviation IMPORTANT: this implementation is buggy, it returns Double.NaN, when stdDev should be 0
Steepness - Class in si.ijs.kt.clus.ext.featureRanking.relief.statistics
 
Steepness - Enum constant in enum class si.ijs.kt.clus.main.settings.section.SettingsRelief.ReliefStatisticsType
 
Steepness(ClusReliefFeatureRanking, int, int, int, int, boolean, boolean) - Constructor for class si.ijs.kt.clus.ext.featureRanking.relief.statistics.Steepness
 
stopcrit - Variable in class si.ijs.kt.clus.ext.beamsearch.ClusBeamAttrSelector
 
stopCrit() - Method in class si.ijs.kt.clus.algo.split.CurrentBestTestAndHeuristic
Stopping criterion
stopCrit() - Method in class si.ijs.kt.clus.ext.optiontree.TestAndHeuristic
Stopping criterion
stopCrit(int) - Method in class si.ijs.kt.clus.ext.optxval.OptXValGroup
 
stopCrit(OptXValNode) - Method in class si.ijs.kt.clus.ext.optxval.OptXValGroup
 
stopCriterion(ClusStatistic, ClusStatistic[], int) - Method in class si.ijs.kt.clus.ext.semisupervised.SemiSupMinLabeledWeightStopCrit
 
stopCriterion(ClusStatistic, ClusStatistic[], int) - Method in class si.ijs.kt.clus.heuristic.ClusHeuristic
 
stopCriterion(ClusStatistic, ClusStatistic[], int) - Method in interface si.ijs.kt.clus.heuristic.stopCriterion.ClusStopCriterion
 
stopCriterion(ClusStatistic, ClusStatistic[], int) - Method in class si.ijs.kt.clus.heuristic.stopCriterion.ClusStopCriterionMinNbExamples
 
stopCriterion(ClusStatistic, ClusStatistic[], int) - Method in class si.ijs.kt.clus.heuristic.stopCriterion.ClusStopCriterionMinWeight
 
stopCriterion(ClusStatistic, ClusStatistic, ClusStatistic) - Method in class si.ijs.kt.clus.ext.semisupervised.SemiSupMinLabeledWeightStopCrit
 
stopCriterion(ClusStatistic, ClusStatistic, ClusStatistic) - Method in class si.ijs.kt.clus.heuristic.ClusHeuristic
 
stopCriterion(ClusStatistic, ClusStatistic, ClusStatistic) - Method in interface si.ijs.kt.clus.heuristic.stopCriterion.ClusStopCriterion
 
stopCriterion(ClusStatistic, ClusStatistic, ClusStatistic) - Method in class si.ijs.kt.clus.heuristic.stopCriterion.ClusStopCriterionMinNbExamples
 
stopCriterion(ClusStatistic, ClusStatistic, ClusStatistic) - Method in class si.ijs.kt.clus.heuristic.stopCriterion.ClusStopCriterionMinWeight
 
StopList - Class in si.ijs.kt.clus.util.tools.textproc
 
StopList() - Constructor for class si.ijs.kt.clus.util.tools.textproc.StopList
 
StopList(String) - Constructor for class si.ijs.kt.clus.util.tools.textproc.StopList
 
stopPlayBack() - Method in class si.ijs.kt.clus.model.io.ClusTreeReader
 
storeLabels(ClusNode, ILevelCHeurStat) - Method in class si.ijs.kt.clus.ext.ilevelc.ILevelCInduce
 
strg - Variable in class si.ijs.kt.clus.util.jeans.util.MStringTokenizer
 
String - Enum constant in enum class si.ijs.kt.clus.data.type.ClusAttrType.AttributeType
 
StringAttrType - Class in si.ijs.kt.clus.data.type.primitive
 
StringAttrType(String) - Constructor for class si.ijs.kt.clus.data.type.primitive.StringAttrType
 
StringAttrType.MySerializable - Class in si.ijs.kt.clus.data.type.primitive
 
StringTable - Class in si.ijs.kt.clus.util.jeans.util.array
 
StringTable() - Constructor for class si.ijs.kt.clus.util.jeans.util.array.StringTable
 
StringUtils - Class in si.ijs.kt.clus.util.jeans.util
 
StringUtils() - Constructor for class si.ijs.kt.clus.util.jeans.util.StringUtils
 
STRUCTURED - Enum constant in enum class si.ijs.kt.clus.main.ClusStatManager.Mode
 
StructuredData - Enum constant in enum class si.ijs.kt.clus.main.settings.section.SettingsTree.Heuristic
 
subClass() - Element in annotation interface si.ijs.kt.clus.util.cloner.Immutable
by default all subclasses of the @Immutable class are not immutable.
subsetAccuracy(DataTuple, DataTuple) - Method in class si.ijs.kt.clus.distance.primitive.relief.MultiLabelDistance
Computes the probability whether the label sets of two data tuples are the same.
SubsetAccuracy - Class in si.ijs.kt.clus.error.mlc
 
SubsetAccuracy - Class in si.ijs.kt.clus.error.mlcForHmlc
 
SubsetAccuracy - Class in si.ijs.kt.clus.error.sets
 
SubsetAccuracy - Enum constant in enum class si.ijs.kt.clus.main.settings.section.SettingsMLC.MultiLabelMeasures
 
SubsetAccuracy - Enum constant in enum class si.ijs.kt.clus.main.settings.section.SettingsRelief.MultilabelDistance
 
SubsetAccuracy() - Constructor for class si.ijs.kt.clus.error.mlcForHmlc.SubsetAccuracy
 
SubsetAccuracy(ClusErrorList, SetAttrType[], ClusAttributeWeights, boolean, ClusDistance) - Constructor for class si.ijs.kt.clus.error.sets.SubsetAccuracy
 
SubsetAccuracy(ClusErrorList, SetAttrType[], ClusAttributeWeights, ClusDistance) - Constructor for class si.ijs.kt.clus.error.sets.SubsetAccuracy
 
SubsetAccuracy(ClusErrorList, SetAttrType[], ClusDistance) - Constructor for class si.ijs.kt.clus.error.sets.SubsetAccuracy
 
SubsetAccuracy(ClusErrorList, NominalAttrType[]) - Constructor for class si.ijs.kt.clus.error.mlc.SubsetAccuracy
 
SubsetSplit - Class in si.ijs.kt.clus.algo.split
 
SubsetSplit() - Constructor for class si.ijs.kt.clus.algo.split.SubsetSplit
 
SubsetTest - Class in si.ijs.kt.clus.model.test
 
SubsetTest(NominalAttrType, int) - Constructor for class si.ijs.kt.clus.model.test.SubsetTest
 
SubsetTest(NominalAttrType, int, boolean[], double) - Constructor for class si.ijs.kt.clus.model.test.SubsetTest
 
SubspaceAveraging - Enum constant in enum class si.ijs.kt.clus.main.settings.section.SettingsEnsemble.EnsembleROSVotingType
Vote only with those targets, that were used for learning, i.e., votes of individual ensemble members contribute to the overall prediction only with those target predictions, that have been used for learning the individual ensemble members.
substract(MNumber) - Method in class si.ijs.kt.clus.util.jeans.math.MNumber
 
subtract(IntervalCollection) - Method in class si.ijs.kt.clus.util.jeans.util.IntervalCollection
 
subtractDeltaU(ClusNode, double, double) - Static method in class si.ijs.kt.clus.pruning.CartPruning
 
subtractFromBits(boolean[]) - Method in class si.ijs.kt.clus.util.jeans.util.IntervalCollection
 
subtractFromOther(double[], double[]) - Static method in class si.ijs.kt.clus.util.jeans.util.array.MDoubleArray
 
subtractFromOther(ClusStatistic) - Method in class si.ijs.kt.clus.error.common.multiscore.MultiScoreStat
 
subtractFromOther(ClusStatistic) - Method in class si.ijs.kt.clus.ext.beamsearch.ClusBeamSimClassStat
 
subtractFromOther(ClusStatistic) - Method in class si.ijs.kt.clus.ext.beamsearch.ClusBeamSimRegrStat
 
subtractFromOther(ClusStatistic) - Method in class si.ijs.kt.clus.statistic.BitVectorStat
 
subtractFromOther(ClusStatistic) - Method in class si.ijs.kt.clus.statistic.ClassificationStat
 
subtractFromOther(ClusStatistic) - Method in class si.ijs.kt.clus.statistic.ClusStatistic
 
subtractFromOther(ClusStatistic) - Method in class si.ijs.kt.clus.statistic.CombStat
 
subtractFromOther(ClusStatistic) - Method in class si.ijs.kt.clus.statistic.CombStatClassRegHier
 
subtractFromOther(ClusStatistic) - Method in class si.ijs.kt.clus.statistic.GeneticDistanceStat
 
subtractFromOther(ClusStatistic) - Method in class si.ijs.kt.clus.statistic.GISStat
Deprecated.
 
subtractFromOther(ClusStatistic) - Method in class si.ijs.kt.clus.statistic.HierSumPairwiseDistancesStat
 
subtractFromOther(ClusStatistic) - Method in class si.ijs.kt.clus.statistic.RegressionStat
 
subtractFromOther(ClusStatistic) - Method in class si.ijs.kt.clus.statistic.RegressionStatBinaryNomiss
 
subtractFromOther(BitList) - Method in class si.ijs.kt.clus.util.jeans.list.BitList
 
subtractFromThis(double[], double[]) - Static method in class si.ijs.kt.clus.util.jeans.util.array.MDoubleArray
 
subtractFromThis(ClusStatistic) - Method in class si.ijs.kt.clus.error.common.multiscore.MultiScoreStat
 
subtractFromThis(ClusStatistic) - Method in class si.ijs.kt.clus.ext.beamsearch.ClusBeamSimClassStat
 
subtractFromThis(ClusStatistic) - Method in class si.ijs.kt.clus.ext.beamsearch.ClusBeamSimRegrStat
 
subtractFromThis(ClusStatistic) - Method in class si.ijs.kt.clus.ext.timeseries.TimeSeriesStat
 
subtractFromThis(ClusStatistic) - Method in class si.ijs.kt.clus.statistic.BitVectorStat
 
subtractFromThis(ClusStatistic) - Method in class si.ijs.kt.clus.statistic.ClassificationStat
 
subtractFromThis(ClusStatistic) - Method in class si.ijs.kt.clus.statistic.ClusStatistic
 
subtractFromThis(ClusStatistic) - Method in class si.ijs.kt.clus.statistic.CombStat
 
subtractFromThis(ClusStatistic) - Method in class si.ijs.kt.clus.statistic.CombStatClassRegHier
 
subtractFromThis(ClusStatistic) - Method in class si.ijs.kt.clus.statistic.GeneticDistanceStat
 
subtractFromThis(ClusStatistic) - Method in class si.ijs.kt.clus.statistic.GISStat
Deprecated.
 
subtractFromThis(ClusStatistic) - Method in class si.ijs.kt.clus.statistic.HierSumPairwiseDistancesStat
 
subtractFromThis(ClusStatistic) - Method in class si.ijs.kt.clus.statistic.RegressionStat
 
subtractFromThis(ClusStatistic) - Method in class si.ijs.kt.clus.statistic.RegressionStatBinaryNomiss
 
subtractFromThis(BitList) - Method in class si.ijs.kt.clus.statistic.GeneticDistanceStat
 
subtractFromThis(BitList) - Method in class si.ijs.kt.clus.util.jeans.list.BitList
 
subtractMissing() - Method in class si.ijs.kt.clus.algo.split.CurrentBestTestAndHeuristic
 
subtractMissing() - Method in class si.ijs.kt.clus.ext.optiontree.TestAndHeuristic
 
subtractMissing(OptXValGroup) - Method in class si.ijs.kt.clus.ext.optxval.OptXValInduce
 
sum(double[]) - Static method in class si.ijs.kt.clus.ext.semisupervised.Helper
Calculates sum of an array of values
SUM - Enum constant in enum class si.ijs.kt.clus.main.settings.section.SettingsHMTR.HierarchyAggregationsHMTR
 
sumColumn(int[][], int) - Method in class si.ijs.kt.clus.error.ContingencyTable
 
sumColumn(int, int) - Method in class si.ijs.kt.clus.error.ContingencyTable
 
sumI(int) - Method in class si.ijs.kt.clus.error.NominalCorrelation
 
sumJ(int) - Method in class si.ijs.kt.clus.error.NominalCorrelation
 
SumPairwiseDistancesStat - Class in si.ijs.kt.clus.statistic
 
SumPairwiseDistancesStat(Settings, ClusDistance) - Constructor for class si.ijs.kt.clus.statistic.SumPairwiseDistancesStat
 
SumPairwiseDistancesStat(Settings, ClusDistance, SettingsTimeSeries.TimeSeriesPrototypeComplexity) - Constructor for class si.ijs.kt.clus.statistic.SumPairwiseDistancesStat
 
sumRow(int[][], int) - Method in class si.ijs.kt.clus.error.ContingencyTable
 
sumRow(int, int) - Method in class si.ijs.kt.clus.error.ContingencyTable
 
sumStats(int) - Method in class si.ijs.kt.clus.ext.optxval.OptXValInduce
 
superSit(ClusData, ClusData) - Method in class si.ijs.kt.clus.algo.tdidt.ClusSITDecisionTree
 
supportsReplacement() - Method in class si.ijs.kt.clus.selection.ClusSelection
 
supportsReplacement() - Method in class si.ijs.kt.clus.selection.OverSample
 
swap(int, int) - Method in class si.ijs.kt.clus.data.rows.RowData
 
swap(int, int) - Method in class si.ijs.kt.clus.data.rows.RowDataSortHelper
 
swap(int, int) - Method in class si.ijs.kt.clus.util.jeans.util.array.MyIntArray
 
swap(int, int) - Method in class si.ijs.kt.clus.util.jeans.util.MyArray
 
swap(int, int) - Method in interface si.ijs.kt.clus.util.jeans.util.sort.MSortable
 
swapObjects(Vector, int, int) - Static method in class si.ijs.kt.clus.util.jeans.util.sort.MVectorSorter
 
sweepSit(ClusData, ClusData) - Method in class si.ijs.kt.clus.algo.tdidt.ClusSITDecisionTree
 
Symbolic - Enum constant in enum class si.ijs.kt.clus.main.settings.section.SettingsEnsemble.EnsembleRanking
 
symmetricDifference(ArrayList<T>, ArrayList<T>) - Static method in class si.ijs.kt.clus.util.jeans.math.MathUtil
Computes the symmetric difference between the two lists.

T

TAB_SIZE - Static variable in class si.ijs.kt.clus.ext.hierarchical.HierIO
 
table - Variable in class si.ijs.kt.clus.util.jeans.util.array.StringTable
 
TAG_ERROR - Static variable in class si.ijs.kt.clus.data.io.ARFFFile
 
TAG_NAME - Static variable in class si.ijs.kt.clus.data.io.ARFFFile
 
Target - Enum constant in enum class si.ijs.kt.clus.data.type.ClusAttrType.AttributeUseType
 
Target - Enum constant in enum class si.ijs.kt.clus.data.type.ClusAttrType.Status
 
TARGET_SPACE - Static variable in class si.ijs.kt.clus.ext.featureRanking.relief.ClusReliefFeatureRanking
 
TARGET_WEIGHT - Static variable in class si.ijs.kt.clus.main.settings.section.SettingsAttribute
 
TargetSet - Class in si.ijs.kt.clus.addon.sit
 
TargetSet() - Constructor for class si.ijs.kt.clus.addon.sit.TargetSet
 
TargetSet(TargetSet) - Constructor for class si.ijs.kt.clus.addon.sit.TargetSet
 
TargetSet(ClusSchema, IntervalCollection) - Constructor for class si.ijs.kt.clus.addon.sit.TargetSet
Creates a targetset from a ClusSchema and an IntervalCollection
TargetSet(ClusAttrType) - Constructor for class si.ijs.kt.clus.addon.sit.TargetSet
 
targetSignDifferent() - Method in class si.ijs.kt.clus.statistic.CombStat
Checks weather values of a target attribute are significantly different
TC - Class in si.ijs.kt.clus.addon.sit.searchAlgorithm
 
TC() - Constructor for class si.ijs.kt.clus.addon.sit.searchAlgorithm.TC
 
temp_data - Variable in class si.ijs.kt.clus.statistic.ClassificationStat
 
term(ClusSchema) - Method in class si.ijs.kt.clus.data.type.primitive.NumericAttrType.MySerializable
 
term(ClusSchema) - Method in class si.ijs.kt.clus.util.io.ClusSerializable
 
termAllModelProcessors(int) - Method in class si.ijs.kt.clus.model.ClusModelInfo
 
termEnsemblePredictionsWriter(int) - Method in class si.ijs.kt.clus.main.ClusModelInfoList
 
terminate(ClusModel) - Method in class si.ijs.kt.clus.algo.rules.ClusCalcRuleErrorProc
 
terminate(ClusModel) - Method in class si.ijs.kt.clus.algo.tdidt.processor.BasicExampleCollector
 
terminate(ClusModel) - Method in class si.ijs.kt.clus.algo.tdidt.processor.NodeExampleCollector
 
terminate(ClusModel) - Method in class si.ijs.kt.clus.algo.tdidt.processor.NodeIDWriter
 
terminate(ClusModel) - Method in class si.ijs.kt.clus.model.processor.CalcStatisticProcessor
 
terminate(ClusModel) - Method in class si.ijs.kt.clus.model.processor.ClusModelProcessor
 
terminate(ClusModel) - Method in class si.ijs.kt.clus.model.processor.ModelProcessorCollection
 
terminateAll() - Method in class si.ijs.kt.clus.model.processor.ClusModelProcessor
 
terminateAll() - Method in class si.ijs.kt.clus.model.processor.ModelProcessorCollection
 
terminateAll() - Method in class si.ijs.kt.clus.model.processor.PredictionWriter
 
terminateEnsemblePredictionWriter(int) - Method in class si.ijs.kt.clus.model.ClusModelInfo
 
termModelProcessors(int) - Method in class si.ijs.kt.clus.main.ClusModelInfoList
 
termModelProcessors(int) - Method in class si.ijs.kt.clus.model.ClusModelInfo
 
termToIndexList(ClassTerm) - Static method in class si.ijs.kt.clus.ext.hierarchical.HierPrologOutput
 
Test - Enum constant in enum class si.ijs.kt.clus.main.settings.section.SettingsGeneral.ResourceInfoLoad
 
Test - Enum constant in enum class si.ijs.kt.clus.main.settings.section.SettingsOutput.WritePredictions
 
Test - Enum constant in enum class si.ijs.kt.clus.main.settings.section.SettingsTimeSeries.TimeSeriesPrototypeComplexity
 
TEST - Static variable in class si.ijs.kt.clus.ext.hierarchical.ClassHierarchy
 
TEST - Static variable in interface si.ijs.kt.clus.model.ClusModel
 
TEST_ERR - Static variable in class si.ijs.kt.clus.model.ClusModelInfo
 
TestAndHeuristic - Class in si.ijs.kt.clus.ext.optiontree
 
TestAndHeuristic(Settings) - Constructor for class si.ijs.kt.clus.ext.optiontree.TestAndHeuristic
 
testerr - Variable in class si.ijs.kt.clus.pruning.ErrorVisitor
 
testModel(String) - Method in class si.ijs.kt.clus.Clus
 
TESTSET - Static variable in class si.ijs.kt.clus.main.ClusModelInfoList
 
testToNode(CurrentBestTestAndHeuristic) - Method in class si.ijs.kt.clus.algo.tdidt.ClusNode
 
testToNode(TestAndHeuristic) - Method in class si.ijs.kt.clus.ext.optiontree.ClusSplitNode
 
THREE_AFTER_DOT - Static variable in class si.ijs.kt.clus.util.format.ClusFormat
 
Threshold - Enum constant in enum class si.ijs.kt.clus.main.settings.section.SettingsSSL.SSLUnlabeledCriteria
Threshold - all of the unlabeled instances with confidence of prediction greater than Threshold will be added to the training set
thresholdToModel(int, double) - Method in class si.ijs.kt.clus.ext.ensemble.ClusForest
 
TIME_SERIES - Enum constant in enum class si.ijs.kt.clus.main.ClusStatManager.Mode
 
TimeSeries - Class in si.ijs.kt.clus.ext.timeseries
 
TimeSeries - Enum constant in enum class si.ijs.kt.clus.data.type.ClusAttrType.AttributeType
 
TimeSeries(double[]) - Constructor for class si.ijs.kt.clus.ext.timeseries.TimeSeries
 
TimeSeries(int) - Constructor for class si.ijs.kt.clus.ext.timeseries.TimeSeries
 
TimeSeries(String) - Constructor for class si.ijs.kt.clus.ext.timeseries.TimeSeries
 
TimeSeries(TimeSeries) - Constructor for class si.ijs.kt.clus.ext.timeseries.TimeSeries
 
TimeSeriesAttrBase - Class in si.ijs.kt.clus.data.cols.attribute
 
TimeSeriesAttrBase(TimeSeriesAttrType) - Constructor for class si.ijs.kt.clus.data.cols.attribute.TimeSeriesAttrBase
 
TimeSeriesAttribute - Class in si.ijs.kt.clus.data.cols.attribute
 
TimeSeriesAttribute(TimeSeriesAttrType) - Constructor for class si.ijs.kt.clus.data.cols.attribute.TimeSeriesAttribute
 
TimeSeriesAttrType - Class in si.ijs.kt.clus.data.type.primitive
 
TimeSeriesAttrType(String) - Constructor for class si.ijs.kt.clus.data.type.primitive.TimeSeriesAttrType
 
TimeSeriesAttrType(String, String) - Constructor for class si.ijs.kt.clus.data.type.primitive.TimeSeriesAttrType
 
TimeSeriesAttrType.MySerializable - Class in si.ijs.kt.clus.data.type.primitive
 
TimeSeriesDist - Class in si.ijs.kt.clus.distance.primitive.timeseries
 
TimeSeriesDist(TimeSeriesAttrType) - Constructor for class si.ijs.kt.clus.distance.primitive.timeseries.TimeSeriesDist
 
TimeSeriesSignificantChangeTesterXVAL - Class in si.ijs.kt.clus.ext.timeseries
 
TimeSeriesSignificantChangeTesterXVAL(ClusErrorList, TimeSeriesStat) - Constructor for class si.ijs.kt.clus.ext.timeseries.TimeSeriesSignificantChangeTesterXVAL
 
TimeSeriesStat - Class in si.ijs.kt.clus.ext.timeseries
 
TimeSeriesStat(Settings, TimeSeriesAttrType, ClusDistance, SettingsTimeSeries.TimeSeriesPrototypeComplexity) - Constructor for class si.ijs.kt.clus.ext.timeseries.TimeSeriesStat
 
TimeSeriesTarget - Class in si.ijs.kt.clus.data.cols.attribute
 
TimeSeriesTarget(ColTarget, TimeSeriesAttrType, int) - Constructor for class si.ijs.kt.clus.data.cols.attribute.TimeSeriesTarget
 
toArray() - Method in class si.ijs.kt.clus.ext.beamsearch.ClusBeam
 
toArray() - Method in class si.ijs.kt.clus.ext.exhaustivesearch.ClusExhaustive
 
toArray() - Method in class si.ijs.kt.clus.util.jeans.util.array.MDoubleArray
 
toArray() - Method in class si.ijs.kt.clus.util.jeans.util.array.MIntArray
 
toArrayList() - Method in class si.ijs.kt.clus.data.rows.RowData
 
toBits() - Method in class si.ijs.kt.clus.util.jeans.util.IntervalCollection
 
toBits(boolean[]) - Method in class si.ijs.kt.clus.util.jeans.util.IntervalCollection
 
toBits(ArrayList) - Static method in class si.ijs.kt.clus.util.jeans.util.IntervalCollection
 
toBits(ArrayList, boolean[]) - Static method in class si.ijs.kt.clus.util.jeans.util.IntervalCollection
 
toCPArray() - Method in class si.ijs.kt.clus.util.jeans.math.matrix.MMatrix
 
toFileString() - Method in class si.ijs.kt.clus.ext.featureRanking.relief.nearestNeighbour.NearestNeighbour
 
toFlat(StringTable) - Method in class si.ijs.kt.clus.ext.hierarchical.ClassesTuple
 
toFlat(StringTable) - Method in class si.ijs.kt.clus.ext.hierarchical.ClassesValue
 
toIndices() - Method in class si.ijs.kt.clus.util.jeans.util.IntervalCollection
 
toPathString() - Method in class si.ijs.kt.clus.ext.hierarchical.ClassesValue
 
toPathString() - Method in class si.ijs.kt.clus.ext.hierarchical.ClassTerm
 
toPathString(String) - Method in class si.ijs.kt.clus.ext.hierarchical.ClassTerm
 
toString() - Method in class si.ijs.kt.clus.addon.sit.TargetSet
 
toString() - Method in class si.ijs.kt.clus.algo.kNN.distance.valentin.VectorDistance
 
toString() - Method in class si.ijs.kt.clus.algo.rules.ClusRule
 
toString() - Method in class si.ijs.kt.clus.algo.split.CurrentBestTestAndHeuristic
Reset
toString() - Method in class si.ijs.kt.clus.algo.tdidt.ClusNode
 
toString() - Method in class si.ijs.kt.clus.data.ClusSchema
 
toString() - Method in class si.ijs.kt.clus.data.rows.DataTuple
 
toString() - Method in class si.ijs.kt.clus.data.rows.RowData
 
toString() - Method in class si.ijs.kt.clus.data.type.ClusAttrType
 
toString() - Method in class si.ijs.kt.clus.distance.primitive.relief.MultiLabelDistance
 
toString() - Method in class si.ijs.kt.clus.ext.beamsearch.ClusBeamModel
 
toString() - Method in enum class si.ijs.kt.clus.ext.ensemble.ClusEnsembleInduce.ParallelTrap
 
toString() - Method in class si.ijs.kt.clus.ext.ensemble.container.NodeDepthPair
 
toString() - Method in class si.ijs.kt.clus.ext.ensemble.ros.ClusROSForestInfo
 
toString() - Method in class si.ijs.kt.clus.ext.ensemble.ros.ClusROSModelInfo
 
toString() - Method in class si.ijs.kt.clus.ext.featureRanking.relief.nearestNeighbour.NearestNeighbour
 
toString() - Method in class si.ijs.kt.clus.ext.hierarchical.ClassesTuple
 
toString() - Method in class si.ijs.kt.clus.ext.hierarchical.ClassesValue
 
toString() - Method in class si.ijs.kt.clus.ext.hierarchical.ClassTerm
 
toString() - Method in class si.ijs.kt.clus.ext.optiontree.ClusSplitNode
 
toString() - Method in class si.ijs.kt.clus.ext.optiontree.TestAndHeuristic
Reset
toString() - Method in class si.ijs.kt.clus.ext.structuredTypes.Set
 
toString() - Method in class si.ijs.kt.clus.ext.structuredTypes.Tuple
 
toString() - Method in class si.ijs.kt.clus.ext.timeseries.TimeSeries
 
toString() - Method in enum class si.ijs.kt.clus.main.settings.section.SettingsRules.InitialRuleGeneratingMethod
 
toString() - Method in class si.ijs.kt.clus.model.ClusModelInfo
 
toString() - Method in class si.ijs.kt.clus.model.test.NodeTest
 
toString() - Method in class si.ijs.kt.clus.statistic.ClassificationStat
 
toString() - Method in class si.ijs.kt.clus.statistic.ClusStatistic
 
toString() - Method in exception class si.ijs.kt.clus.util.exception.ClusException
 
toString() - Method in class si.ijs.kt.clus.util.jeans.io.ini.INIFileEnum
 
toString() - Method in class si.ijs.kt.clus.util.jeans.list.BitList
 
toString() - Method in class si.ijs.kt.clus.util.jeans.math.matrix.MSymMatrix
 
toString() - Method in class si.ijs.kt.clus.util.jeans.math.MDouble
 
toString() - Method in class si.ijs.kt.clus.util.jeans.math.SingleStat
 
toString() - Method in class si.ijs.kt.clus.util.jeans.util.array.MDoubleArray
 
toString() - Method in class si.ijs.kt.clus.util.jeans.util.array.MIntArray
 
toString() - Method in class si.ijs.kt.clus.util.jeans.util.array.MyIntArray
 
toString() - Method in class si.ijs.kt.clus.util.jeans.util.IntervalCollection
 
toString() - Method in class si.ijs.kt.clus.util.jeans.util.MStreamTokenizer
 
toString() - Method in class si.ijs.kt.clus.util.tools.manual.ManualEntry
 
toString() - Method in class si.ijs.kt.clus.util.tools.manual.ManualSectionEntry
 
toString(double[]) - Static method in class si.ijs.kt.clus.util.jeans.util.array.MDoubleArray
 
toString(int) - Method in class si.ijs.kt.clus.util.jeans.math.matrix.MSymMatrix
 
toString(int[]) - Static method in class si.ijs.kt.clus.util.jeans.util.array.MIntArray
 
toString(String) - Method in class si.ijs.kt.clus.data.rows.RowData
 
toString(ClassHierarchy, char, boolean) - Method in class si.ijs.kt.clus.ext.hierarchical.ClassesTuple
 
toStringData(ClassHierarchy) - Method in class si.ijs.kt.clus.ext.hierarchical.ClassesTuple
 
toStringData(ClassHierarchy) - Method in class si.ijs.kt.clus.ext.hierarchical.ClassesValue
 
toStringHuman(ClassHierarchy) - Method in class si.ijs.kt.clus.ext.hierarchical.ClassesTuple
 
toStringHuman(ClassHierarchy) - Method in class si.ijs.kt.clus.ext.hierarchical.ClassTerm
 
toStringWithDepths(ClassHierarchy) - Method in class si.ijs.kt.clus.ext.hierarchical.ClassesValue
 
TotalAveraging - Enum constant in enum class si.ijs.kt.clus.main.settings.section.SettingsEnsemble.EnsembleROSVotingType
Use all targets for voting.
TotCoverageWeighted - Enum constant in enum class si.ijs.kt.clus.main.settings.section.SettingsRules.RulePredictionMethod
Each rule's prediction has a weight proportional to its coverage on the total learning set
toVector() - Method in class si.ijs.kt.clus.util.jeans.list.BitList
 
train(RowData) - Method in class si.ijs.kt.clus.Clus
 
Train - Enum constant in enum class si.ijs.kt.clus.main.settings.section.SettingsOutput.WritePredictions
 
TRAIN - Static variable in interface si.ijs.kt.clus.model.ClusModel
 
TRAIN_ERR - Static variable in class si.ijs.kt.clus.model.ClusModelInfo
 
TRAINSET - Static variable in class si.ijs.kt.clus.main.ClusModelInfoList
 
transformToMajority(double[][]) - Static method in class si.ijs.kt.clus.ext.ensemble.ClusEnsembleInduceOptimization
Transform the class counts to majority vote (the one with max votes gets 1)
transformToProbabilityDistribution(double[][]) - Static method in class si.ijs.kt.clus.ext.ensemble.ClusEnsembleInduceOptimization
Transform the class counts to probability distributions.
traverseTreeAndRecordEncodingCost(ClusNode, ClusNode, RowData) - Method in class si.ijs.kt.clus.pruning.EncodingCostPruning
 
traverseTreeAndRecordEncodingCostIfLeafChildren(ClusNode, ClusNode, RowData) - Method in class si.ijs.kt.clus.pruning.EncodingCostPruning
 
Tree - Enum constant in enum class si.ijs.kt.clus.main.settings.section.SettingsHMLC.HierarchyType
 
Tree - Enum constant in enum class si.ijs.kt.clus.main.settings.section.SettingsHMTR.HierarchyTypesHMTR
 
TREE - Static variable in class si.ijs.kt.clus.ext.hierarchical.ClassHierarchy
 
TREE_ERROR - Static variable in class si.ijs.kt.clus.error.common.ClusError
 
TREE_POSTFIX - Static variable in class si.ijs.kt.clus.error.common.ClusError
 
treecpt - Static variable in class si.ijs.kt.clus.main.Global
 
TreeErrorComputer - Class in si.ijs.kt.clus.pruning
 
TreeErrorComputer() - Constructor for class si.ijs.kt.clus.pruning.TreeErrorComputer
 
TreeIterator - Class in si.ijs.kt.clus.util.jeans.tree
 
TreeIterator(Node) - Constructor for class si.ijs.kt.clus.util.jeans.tree.TreeIterator
 
TreeIterator(TreeIterator) - Constructor for class si.ijs.kt.clus.util.jeans.tree.TreeIterator
 
trimDirSeparator(String) - Static method in class si.ijs.kt.clus.util.jeans.util.FileUtil
 
trimSpacesAndTabs(String) - Static method in class si.ijs.kt.clus.util.jeans.util.StringUtils
 
trimToSize() - Method in class si.ijs.kt.clus.util.jeans.util.array.MyIntArray
 
trimToSize() - Method in class si.ijs.kt.clus.util.jeans.util.MyArray
 
Triple<T1,T2,T3> - Class in si.ijs.kt.clus.util.tuple
Implements 3-Tuple.
Triple(T1, T2, T3) - Constructor for class si.ijs.kt.clus.util.tuple.Triple
 
TrueValues(int) - Constructor for class si.ijs.kt.clus.util.tools.optimization.OptimizationProblem.TrueValues
An empty class
TrueValues(int, DataTuple) - Constructor for class si.ijs.kt.clus.util.tools.optimization.OptimizationProblem.TrueValues
 
tryEachLeaf(ClusNode, ClusNode, int, double, int[]) - Method in class si.ijs.kt.clus.ext.ilevelc.ILevelCInduce
 
tryGivenLeaf(ClusNode, boolean, int, double, int[]) - Method in class si.ijs.kt.clus.ext.ilevelc.ILevelCInduce
 
tryInitializeMLC(int[], RowData, double) - Method in class si.ijs.kt.clus.algo.kNN.KnnModel
 
tryInitializeMLC(int[], RowData, KnnModel, double) - Method in class si.ijs.kt.clus.statistic.KnnMlcStat
Initializes MLC counts, i.e., updates the fields m_PriorLabelProbabilities and m_NeighbourhoodProbabilities.
tryLabel(ILevelCHeurStat, ILevelCHeurStat, int, int) - Method in class si.ijs.kt.clus.ext.ilevelc.ILevelCInduce
 
tryLogBeam(MyFile, ClusBeam, String) - Method in class si.ijs.kt.clus.ext.beamsearch.ClusBeamSearch
 
tryLogBeam(MyFile, ClusBeam, String) - Method in class si.ijs.kt.clus.ext.exhaustivesearch.ClusExhaustiveSearch
 
tryReOpen() - Method in class si.ijs.kt.clus.data.io.ClusReader
 
TSC - Enum constant in enum class si.ijs.kt.clus.main.settings.section.SettingsTimeSeries.TimeSeriesDistanceMeasure
 
TSC - Enum constant in enum class si.ijs.kt.clus.main.settings.section.SettingsTree.TimeSeriesDistanceMeasure
 
TSCTimeSeriesDist - Class in si.ijs.kt.clus.distance.primitive.timeseries
 
TSCTimeSeriesDist(TimeSeriesAttrType) - Constructor for class si.ijs.kt.clus.distance.primitive.timeseries.TSCTimeSeriesDist
 
tuple - Variable in class si.ijs.kt.clus.algo.kNN.distance.distanceWeighting.DistanceWeighting
Tuple to be classified
Tuple - Class in si.ijs.kt.clus.ext.structuredTypes
 
Tuple - Enum constant in enum class si.ijs.kt.clus.data.type.ClusAttrType.AttributeType
 
Tuple(int) - Constructor for class si.ijs.kt.clus.ext.structuredTypes.Tuple
 
Tuple(Object[]) - Constructor for class si.ijs.kt.clus.ext.structuredTypes.Tuple
 
Tuple(String) - Constructor for class si.ijs.kt.clus.ext.structuredTypes.Tuple
 
Tuple(Tuple) - Constructor for class si.ijs.kt.clus.ext.structuredTypes.Tuple
 
TupleAttrType - Class in si.ijs.kt.clus.data.type.complex
 
TupleAttrType(String) - Constructor for class si.ijs.kt.clus.data.type.complex.TupleAttrType
 
TupleAttrType(String, String, ClusAttrType[]) - Constructor for class si.ijs.kt.clus.data.type.complex.TupleAttrType
 
TupleAttrType.MySerializable - Class in si.ijs.kt.clus.data.type.complex
 
TupleDistance - Class in si.ijs.kt.clus.distance.complex
 
TupleDistance(TupleAttrType) - Constructor for class si.ijs.kt.clus.distance.complex.TupleDistance
 
TupleIterator - Class in si.ijs.kt.clus.data.rows
 
TupleIterator() - Constructor for class si.ijs.kt.clus.data.rows.TupleIterator
 
TupleIterator(DataPreprocs) - Constructor for class si.ijs.kt.clus.data.rows.TupleIterator
 
TuplePreproc - Interface in si.ijs.kt.clus.data.rows
 
TupleStatistic - Class in si.ijs.kt.clus.ext.structuredTypes
 
TupleStatistic(Settings, TupleAttrType, ClusDistance, SettingsTimeSeries.TimeSeriesPrototypeComplexity) - Constructor for class si.ijs.kt.clus.ext.structuredTypes.TupleStatistic
 
TWO_AFTER_DOT - Static variable in class si.ijs.kt.clus.util.format.ClusFormat
 
twoSidedSit(ClusData, ClusData) - Method in class si.ijs.kt.clus.algo.tdidt.ClusSITDecisionTree
 
type - Variable in class si.ijs.kt.clus.ext.semisupervised.confidence.RandomScore
 
TYPE_DOUBLE_ARRAY - Static variable in class si.ijs.kt.clus.util.jeans.io.ini.INIFile
 
TYPE_INT_ARRAY - Static variable in class si.ijs.kt.clus.util.jeans.io.ini.INIFile
 
TYPE_INVERSE_NUMERIC - Static variable in class si.ijs.kt.clus.algo.split.CurrentBestTestAndHeuristic
 
TYPE_INVERSE_NUMERIC - Static variable in class si.ijs.kt.clus.ext.optiontree.TestAndHeuristic
 
TYPE_NONE - Static variable in class si.ijs.kt.clus.algo.split.CurrentBestTestAndHeuristic
 
TYPE_NONE - Static variable in class si.ijs.kt.clus.ext.optiontree.TestAndHeuristic
 
TYPE_NUMERIC - Static variable in class si.ijs.kt.clus.algo.split.CurrentBestTestAndHeuristic
 
TYPE_NUMERIC - Static variable in class si.ijs.kt.clus.ext.optiontree.TestAndHeuristic
 
TYPE_STRING_ARRAY - Static variable in class si.ijs.kt.clus.util.jeans.io.ini.INIFile
 
TYPE_TEST - Static variable in class si.ijs.kt.clus.algo.split.CurrentBestTestAndHeuristic
 
TYPE_TEST - Static variable in class si.ijs.kt.clus.ext.optiontree.TestAndHeuristic
 

U

unCaseCompare(String, String) - Static method in class si.ijs.kt.clus.util.jeans.util.StringUtils
 
Undefined - Enum constant in enum class si.ijs.kt.clus.main.settings.section.SettingsEnsemble.EnsembleBootstrapping
 
Undefined - Enum constant in enum class si.ijs.kt.clus.main.settings.section.SettingsHMLC.HierarchyMeasures
 
union(int, int) - Method in class si.ijs.kt.clus.util.jeans.util.DisjointSetForest
 
union(ClusStatistic) - Method in class si.ijs.kt.clus.statistic.ClusStatistic
 
union(ClusStatistic) - Method in class si.ijs.kt.clus.statistic.WHTDStatistic
 
Union - Enum constant in enum class si.ijs.kt.clus.main.settings.section.SettingsRules.CoveringMethod
In multi-label classification: predicted set of classes is union of predictions of individual rules
Union - Enum constant in enum class si.ijs.kt.clus.main.settings.section.SettingsRules.RulePredictionMethod
 
unionDone() - Method in class si.ijs.kt.clus.statistic.ClusStatistic
 
unionDone() - Method in class si.ijs.kt.clus.statistic.WHTDStatistic
 
unionInit() - Method in class si.ijs.kt.clus.statistic.ClusStatistic
 
unionInit() - Method in class si.ijs.kt.clus.statistic.WHTDStatistic
 
unique(ClusRule) - Method in class si.ijs.kt.clus.algo.rules.ClusRuleSet
Tests if the rule is already in the rule set.
uniqueDeeply(ClusRule) - Method in class si.ijs.kt.clus.algo.rules.ClusRuleSet
 
UniqueNodeIdentifier - Class in si.ijs.kt.clus.util
 
UniqueNodeIdentifier(int) - Constructor for class si.ijs.kt.clus.util.UniqueNodeIdentifier
 
UNK - Static variable in class si.ijs.kt.clus.algo.tdidt.ClusNode
 
Unknown - Enum constant in enum class si.ijs.kt.clus.main.settings.section.SettingsHMLC.HierarchyType
 
UNKNOWN - Static variable in class si.ijs.kt.clus.ext.hierarchical.ClassHierarchy
 
UNKNOWN - Static variable in class si.ijs.kt.clus.model.test.NodeTest
 
unprepare() - Method in class si.ijs.kt.clus.data.cols.attribute.ClusAttribute
 
unprepare() - Method in class si.ijs.kt.clus.data.cols.attribute.NumericAttribute
 
unregisterFastCloner(Class<?>) - Method in class si.ijs.kt.clus.util.cloner.Cloner
 
unsort(double[], int[]) - Static method in class si.ijs.kt.clus.util.jeans.util.sort.DoubleIndexSorter
 
update(ClusSchema) - Method in class si.ijs.kt.clus.main.settings.Settings
 
update(ColTarget, int) - Method in class si.ijs.kt.clus.error.common.multiscore.MultiScoreStat
 
update(ColTarget, int) - Method in class si.ijs.kt.clus.statistic.BitVectorStat
 
update(ColTarget, int) - Method in class si.ijs.kt.clus.statistic.ClusStatistic
 
update(ClassTerm, int, double[]) - Method in class si.ijs.kt.clus.error.hmlc.HierLevelAccuracy
 
update(ClusSelection) - Method in class si.ijs.kt.clus.data.rows.RowData
 
Update - Enum constant in enum class si.ijs.kt.clus.main.settings.section.SettingsRules.GDExternalMethodValues
 
updateAll(boolean[], double[], boolean[]) - Method in class si.ijs.kt.clus.error.mlcForHmlc.MlcMeasuresForHmlc
 
updateAllPredictions(ArrayList<ClusBeamModel>) - Method in class si.ijs.kt.clus.ext.beamsearch.ClusBeamInduce
 
updateArity() - Method in class si.ijs.kt.clus.algo.tdidt.ClusNode
 
updateArity() - Method in class si.ijs.kt.clus.ext.optiontree.ClusSplitNode
 
updateArity() - Method in class si.ijs.kt.clus.model.test.NodeTest
 
updateAttributeUse() - Method in class si.ijs.kt.clus.data.ClusSchema
 
updateCenter() - Method in class si.ijs.kt.clus.ext.ilevelc.COPKMeansCluster
 
updateClusterCenters() - Method in class si.ijs.kt.clus.ext.ilevelc.COPKMeans
 
updateCounts(ArrayList<Integer>, int, int, int) - Method in class si.ijs.kt.clus.ext.ensemble.ClusForest
Used for more efficient updating if the corresponding tree is a part of more than one forest.
updateDataFile(String) - Method in class si.ijs.kt.clus.main.settings.section.SettingsData
 
updateDefaultRule(ClusRuleSet, RowData) - Method in class si.ijs.kt.clus.algo.rules.ClusRuleConstraintInduce
 
updateDefaultRule(ClusRuleSet, RowData) - Method in class si.ijs.kt.clus.algo.rules.ClusRuleInduce
Updates the default rule.
updateDisabledSettings() - Method in class si.ijs.kt.clus.main.settings.Settings
 
updateDistribution(double[], double) - Method in class si.ijs.kt.clus.ext.hierarchical.ClassesTuple
 
updateErrorMeasures(ClusRun) - Method in class si.ijs.kt.clus.addon.hmc.HMCAverageSingleClass.HMCAverageNodeWiseModels
 
updateExtra(DataTuple, ClusStatistic[], int) - Static method in class si.ijs.kt.clus.ext.optxval.OptXValIndOV
Deprecated.
 
updateFoldSet(DataTuple, int[]) - Method in class si.ijs.kt.clus.ext.optxval.SoftNumericTest
 
updateFoldSet(RowData, int, DataTuple, int[]) - Method in class si.ijs.kt.clus.ext.optxval.SoftNumericTest
 
updateFoldSet2(RowData, int, DataTuple, int[]) - Method in class si.ijs.kt.clus.ext.optxval.SoftNumericTest
 
updateFromGlobalMeasure(ClusError) - Method in class si.ijs.kt.clus.error.common.ClusError
 
updateFromGlobalMeasure(ClusError) - Method in class si.ijs.kt.clus.error.hmlc.HierClassWiseAccuracy
 
updateFromGlobalMeasure(ClusError) - Method in class si.ijs.kt.clus.error.hmlc.HierErrorMeasures
 
updateFromGlobalMeasure(ClusErrorList) - Method in class si.ijs.kt.clus.error.common.ClusErrorList
 
updateInverseNumeric(double, ClusAttrType) - Method in class si.ijs.kt.clus.algo.split.CurrentBestTestAndHeuristic
Take the inverse test '<=' instead of the default '>'.
updateInverseNumeric(double, ClusAttrType) - Method in class si.ijs.kt.clus.ext.optiontree.TestAndHeuristic
Take the inverse test '<=' instead of the default '>'.
updateLambda(ClusNode) - Static method in class si.ijs.kt.clus.pruning.CartPruning
 
updateLambdaMin(ClusNode) - Static method in class si.ijs.kt.clus.pruning.CartPruning
 
updateMaxMemory() - Static method in class si.ijs.kt.clus.main.ClusStat
 
updateModelRefinement(ClusBeamModel) - Method in class si.ijs.kt.clus.ext.beamsearch.ClusFastBeamSearch
 
updateName(ClusModelInfo) - Method in class si.ijs.kt.clus.model.ClusModelInfo
 
updateNbRandomAttrSelected(ClusSchema) - Method in class si.ijs.kt.clus.main.settings.section.SettingsEnsemble
 
updateNumeric(double, ClusAttrType) - Method in class si.ijs.kt.clus.algo.split.CurrentBestTestAndHeuristic
 
updateNumeric(double, ClusAttrType) - Method in class si.ijs.kt.clus.ext.optiontree.TestAndHeuristic
 
updateNumeric(double, ClusAttrType, double, boolean) - Method in class si.ijs.kt.clus.algo.split.CurrentBestTestAndHeuristic
 
updateNumeric(double, ClusStatistic, ClusAttrType) - Method in class si.ijs.kt.clus.algo.split.CurrentBestTestAndHeuristic
Numeric splits
updateNumeric(double, ClusStatistic, ClusAttrType) - Method in class si.ijs.kt.clus.ext.optiontree.TestAndHeuristic
Numeric splits
updateNumericGIS(double, ClusAttrType, Integer[]) - Method in class si.ijs.kt.clus.algo.split.CurrentBestTestAndHeuristic
Version of updateNumeric for if there are any GIS attributes.
updateOOBMapping(DataTuple, int) - Method in class si.ijs.kt.clus.ext.ensemble.ClusOOBErrorEstimate
 
updateOOBTuple(DataTuple, ClusModel) - Method in class si.ijs.kt.clus.ext.ensemble.ClusOOBErrorEstimate
 
updateOOBTuples(OOBSelection, RowData, ClusModel, int) - Method in class si.ijs.kt.clus.ext.ensemble.ClusOOBErrorEstimate
 
updatePrediction(RowData, int, int, ClusModel, ClassTerm, ClassTerm) - Method in class si.ijs.kt.clus.addon.hmc.HMCAverageSingleClass.HMCAverageNodeWiseModels
 
updatePredictionsForTuples(ClusModel, TupleIterator, TupleIterator) - Method in class si.ijs.kt.clus.ext.ensemble.ClusEnsembleInduceOptClassification
 
updatePredictionsForTuples(ClusModel, TupleIterator, TupleIterator) - Method in class si.ijs.kt.clus.ext.ensemble.ClusEnsembleInduceOptimization
 
updatePredictionsForTuples(ClusModel, TupleIterator, TupleIterator) - Method in class si.ijs.kt.clus.ext.ensemble.ClusEnsembleInduceOptRegHMLC
 
updatePredictWriterSchema(ClusSchema) - Method in class si.ijs.kt.clus.data.type.ClusAttrType
 
updatePredictWriterSchema(ClusSchema) - Method in class si.ijs.kt.clus.data.type.hierarchies.ClassesAttrType
 
updatePredictWriterSchema(ClusSchema) - Method in class si.ijs.kt.clus.data.type.hierarchies.ClassesAttrTypeSingleLabel
 
updatePrunedModelInfo(ClusModelInfo) - Method in class si.ijs.kt.clus.ext.hierarchical.HierClassTresholdPruner
 
updatePrunedModelInfo(ClusModelInfo) - Method in class si.ijs.kt.clus.pruning.PruneTree
 
updateRange(SimpleMatrix, int, int, int, int, double) - Static method in class si.ijs.kt.clus.ext.featureRanking.relief.statistics.Steepness
 
updateRange(SimpleMatrix, int, int, int, int, Random) - Static method in class si.ijs.kt.clus.ext.featureRanking.relief.statistics.Steepness
 
updateRange(SimpleMatrix, int, int, SimpleMatrix) - Static method in class si.ijs.kt.clus.ext.featureRanking.relief.statistics.Steepness
 
updateSoft() - Method in class si.ijs.kt.clus.ext.optxval.OptXValGroup
 
updateStatistic(String, ClusStatistic[]) - Method in class si.ijs.kt.clus.Clus
 
updateStatistics(int, int, double) - Method in class si.ijs.kt.clus.ext.featureRanking.relief.statistics.Classic
 
updateStatistics(int, int, double) - Method in class si.ijs.kt.clus.ext.featureRanking.relief.statistics.DistanceSimplified
 
updateStatistics(int, int, double) - Method in class si.ijs.kt.clus.ext.featureRanking.relief.statistics.Statistics
 
updateStatistics(int, int, double) - Method in class si.ijs.kt.clus.ext.featureRanking.relief.statistics.Steepness
 
updateStatistics(int, int, double) - Method in class si.ijs.kt.clus.ext.featureRanking.relief.statistics.Variance
 
updateStatistics(ClusModel) - Method in class si.ijs.kt.clus.main.ClusStatManager
 
updateSums(double, double, int) - Method in class si.ijs.kt.clus.error.PearsonCorrelation
 
updateTarget(ClusSchema) - Method in class si.ijs.kt.clus.main.settings.Settings
 
updateTempStatistics(int, boolean, DataTuple, RowData, NearestNeighbour, double, int, int) - Method in class si.ijs.kt.clus.ext.featureRanking.relief.statistics.Classic
 
updateTempStatistics(int, boolean, DataTuple, RowData, NearestNeighbour, double, int, int) - Method in class si.ijs.kt.clus.ext.featureRanking.relief.statistics.DistanceSimplified
 
updateTempStatistics(int, boolean, DataTuple, RowData, NearestNeighbour, double, int, int) - Method in class si.ijs.kt.clus.ext.featureRanking.relief.statistics.Statistics
 
updateTempStatistics(int, boolean, DataTuple, RowData, NearestNeighbour, double, int, int) - Method in class si.ijs.kt.clus.ext.featureRanking.relief.statistics.Steepness
 
updateTempStatistics(int, boolean, DataTuple, RowData, NearestNeighbour, double, int, int) - Method in class si.ijs.kt.clus.ext.featureRanking.relief.statistics.Variance
 
updateTest() - Method in class si.ijs.kt.clus.algo.split.CurrentBestTestAndHeuristic
 
updateTest() - Method in class si.ijs.kt.clus.ext.optiontree.TestAndHeuristic
 
updateThresholds(double) - Method in class si.ijs.kt.clus.algo.tdidt.ClusNode
 
updateTree() - Method in class si.ijs.kt.clus.algo.tdidt.ClusNode
 
updateWeighted(DataTuple, double) - Method in class si.ijs.kt.clus.ext.beamsearch.ClusBeamSimClassStat
 
updateWeighted(DataTuple, double) - Method in class si.ijs.kt.clus.ext.beamsearch.ClusBeamSimRegrStat
 
updateWeighted(DataTuple, double) - Method in class si.ijs.kt.clus.ext.ilevelc.ILevelCHeurStat
 
updateWeighted(DataTuple, double) - Method in class si.ijs.kt.clus.statistic.ClassificationStat
 
updateWeighted(DataTuple, double) - Method in class si.ijs.kt.clus.statistic.ClusStatistic
 
updateWeighted(DataTuple, double) - Method in class si.ijs.kt.clus.statistic.CombStat
 
updateWeighted(DataTuple, double) - Method in class si.ijs.kt.clus.statistic.CombStatClassRegHier
 
updateWeighted(DataTuple, double) - Method in class si.ijs.kt.clus.statistic.RegressionStat
 
updateWeighted(DataTuple, double) - Method in class si.ijs.kt.clus.statistic.WHTDStatistic
 
updateWeighted(DataTuple, int) - Method in class si.ijs.kt.clus.error.common.multiscore.MultiScoreStat
 
updateWeighted(DataTuple, int) - Method in class si.ijs.kt.clus.ext.beamsearch.ClusBeamSimClassStat
 
updateWeighted(DataTuple, int) - Method in class si.ijs.kt.clus.ext.structuredTypes.SetStatistic
 
updateWeighted(DataTuple, int) - Method in class si.ijs.kt.clus.ext.structuredTypes.TupleStatistic
 
updateWeighted(DataTuple, int) - Method in class si.ijs.kt.clus.ext.timeseries.TimeSeriesStat
 
updateWeighted(DataTuple, int) - Method in class si.ijs.kt.clus.statistic.BitVectorStat
 
updateWeighted(DataTuple, int) - Method in class si.ijs.kt.clus.statistic.ClassificationStat
 
updateWeighted(DataTuple, int) - Method in class si.ijs.kt.clus.statistic.ClusStatistic
 
updateWeighted(DataTuple, int) - Method in class si.ijs.kt.clus.statistic.CombStat
 
updateWeighted(DataTuple, int) - Method in class si.ijs.kt.clus.statistic.CombStatClassRegHier
 
updateWeighted(DataTuple, int) - Method in class si.ijs.kt.clus.statistic.GeneticDistanceStat
 
updateWeighted(DataTuple, int) - Method in class si.ijs.kt.clus.statistic.HierSumPairwiseDistancesStat
 
updateWeighted(DataTuple, int) - Method in class si.ijs.kt.clus.statistic.RegressionStatBase
 
updateWeighted(SparseDataTuple, double) - Method in class si.ijs.kt.clus.ext.beamsearch.ClusBeamSimRegrStat
 
updateWeighted(SparseDataTuple, int) - Method in class si.ijs.kt.clus.error.common.multiscore.MultiScoreStat
 
updateWeighted(SparseDataTuple, int) - Method in class si.ijs.kt.clus.ext.beamsearch.ClusBeamSimClassStat
 
updateWeights(RowData, double[], double) - Method in class si.ijs.kt.clus.ext.ensemble.ClusBoostingInduce
 
UseDescriptive - Enum constant in enum class si.ijs.kt.clus.main.settings.section.SettingsRelief.MissingTargetHandling
 
useMEstimate() - Method in class si.ijs.kt.clus.main.settings.section.SettingsHMLC
 
UserDefinedWeighting - Class in si.ijs.kt.clus.algo.kNN.distance.attributeWeighting
 
UserDefinedWeighting(double[]) - Constructor for class si.ijs.kt.clus.algo.kNN.distance.attributeWeighting.UserDefinedWeighting
 

V

VALID_ERR - Static variable in class si.ijs.kt.clus.model.ClusModelInfo
 
validateSettings(ClusSchema) - Method in class si.ijs.kt.clus.main.settings.Settings
 
validateSettingsInternal() - Method in class si.ijs.kt.clus.main.settings.section.SettingsEnsemble
 
validateSettingsInternal() - Method in class si.ijs.kt.clus.main.settings.SettingsBase
This method should be overriden to check for inconsistencies in the section settings.
VALIDATIONSET - Static variable in class si.ijs.kt.clus.main.ClusModelInfoList
 
ValueCheck - Interface in si.ijs.kt.clus.util.jeans.io.range
 
valueOf(String) - Static method in enum class si.ijs.kt.clus.Clus.DebugType
Returns the enum constant of this class with the specified name.
valueOf(String) - Static method in enum class si.ijs.kt.clus.data.type.ClusAttrType.AttributeType
Returns the enum constant of this class with the specified name.
valueOf(String) - Static method in enum class si.ijs.kt.clus.data.type.ClusAttrType.AttributeUseType
Returns the enum constant of this class with the specified name.
valueOf(String) - Static method in enum class si.ijs.kt.clus.data.type.ClusAttrType.Status
Returns the enum constant of this class with the specified name.
valueOf(String) - Static method in enum class si.ijs.kt.clus.data.type.ClusAttrType.ValueType
Returns the enum constant of this class with the specified name.
valueOf(String) - Static method in enum class si.ijs.kt.clus.error.mlcForHmlc.MLROCAndPRCurve.CurveType
Returns the enum constant of this class with the specified name.
valueOf(String) - Static method in enum class si.ijs.kt.clus.ext.ensemble.ClusEnsembleInduce.ParallelTrap
Returns the enum constant of this class with the specified name.
valueOf(String) - Static method in enum class si.ijs.kt.clus.main.ClusStatManager.Mode
Returns the enum constant of this class with the specified name.
valueOf(String) - Static method in enum class si.ijs.kt.clus.main.ClusStatManager.TargetType
Returns the enum constant of this class with the specified name.
valueOf(String) - Static method in enum class si.ijs.kt.clus.main.settings.section.SettingsData.NormalizeDataValues
Returns the enum constant of this class with the specified name.
valueOf(String) - Static method in enum class si.ijs.kt.clus.main.settings.section.SettingsEnsemble.EnsembleBootstrapping
Returns the enum constant of this class with the specified name.
valueOf(String) - Static method in enum class si.ijs.kt.clus.main.settings.section.SettingsEnsemble.EnsembleMethod
Returns the enum constant of this class with the specified name.
valueOf(String) - Static method in enum class si.ijs.kt.clus.main.settings.section.SettingsEnsemble.EnsembleRanking
Returns the enum constant of this class with the specified name.
valueOf(String) - Static method in enum class si.ijs.kt.clus.main.settings.section.SettingsEnsemble.EnsembleROSAlgorithmType
Returns the enum constant of this class with the specified name.
valueOf(String) - Static method in enum class si.ijs.kt.clus.main.settings.section.SettingsEnsemble.EnsembleROSVotingType
Returns the enum constant of this class with the specified name.
valueOf(String) - Static method in enum class si.ijs.kt.clus.main.settings.section.SettingsEnsemble.EnsembleVotingType
Returns the enum constant of this class with the specified name.
valueOf(String) - Static method in enum class si.ijs.kt.clus.main.settings.section.SettingsEnsemble.RandomAttributeTypeSelection
Returns the enum constant of this class with the specified name.
valueOf(String) - Static method in enum class si.ijs.kt.clus.main.settings.section.SettingsGeneral.ResourceInfoLoad
Returns the enum constant of this class with the specified name.
valueOf(String) - Static method in enum class si.ijs.kt.clus.main.settings.section.SettingsHMLC.HierarchyDistance
Returns the enum constant of this class with the specified name.
valueOf(String) - Static method in enum class si.ijs.kt.clus.main.settings.section.SettingsHMLC.HierarchyMeasures
Returns the enum constant of this class with the specified name.
valueOf(String) - Static method in enum class si.ijs.kt.clus.main.settings.section.SettingsHMLC.HierarchyType
Returns the enum constant of this class with the specified name.
valueOf(String) - Static method in enum class si.ijs.kt.clus.main.settings.section.SettingsHMLC.HierarchyWeight
Returns the enum constant of this class with the specified name.
valueOf(String) - Static method in enum class si.ijs.kt.clus.main.settings.section.SettingsHMTR.HierarchyAggregationsHMTR
Returns the enum constant of this class with the specified name.
valueOf(String) - Static method in enum class si.ijs.kt.clus.main.settings.section.SettingsHMTR.HierarchyDistanceHMTR
Returns the enum constant of this class with the specified name.
valueOf(String) - Static method in enum class si.ijs.kt.clus.main.settings.section.SettingsHMTR.HierarchyTypesHMTR
Returns the enum constant of this class with the specified name.
valueOf(String) - Static method in enum class si.ijs.kt.clus.main.settings.section.SettingsKNN.Distance
Returns the enum constant of this class with the specified name.
valueOf(String) - Static method in enum class si.ijs.kt.clus.main.settings.section.SettingsKNN.DistanceWeights
Returns the enum constant of this class with the specified name.
valueOf(String) - Static method in enum class si.ijs.kt.clus.main.settings.section.SettingsKNN.SearchMethod
Returns the enum constant of this class with the specified name.
valueOf(String) - Static method in enum class si.ijs.kt.clus.main.settings.section.SettingsMLC.MultiLabelMeasures
Returns the enum constant of this class with the specified name.
valueOf(String) - Static method in enum class si.ijs.kt.clus.main.settings.section.SettingsMLC.MultiLabelThresholdOptimization
Returns the enum constant of this class with the specified name.
valueOf(String) - Static method in enum class si.ijs.kt.clus.main.settings.section.SettingsOutput.ConvertRules
Returns the enum constant of this class with the specified name.
valueOf(String) - Static method in enum class si.ijs.kt.clus.main.settings.section.SettingsOutput.PythonModelType
Returns the enum constant of this class with the specified name.
valueOf(String) - Static method in enum class si.ijs.kt.clus.main.settings.section.SettingsOutput.ShowInfo
Returns the enum constant of this class with the specified name.
valueOf(String) - Static method in enum class si.ijs.kt.clus.main.settings.section.SettingsOutput.ShowModels
Returns the enum constant of this class with the specified name.
valueOf(String) - Static method in enum class si.ijs.kt.clus.main.settings.section.SettingsOutput.WritePredictions
Returns the enum constant of this class with the specified name.
valueOf(String) - Static method in enum class si.ijs.kt.clus.main.settings.section.SettingsPhylogeny.PhylogenyCriterion
Returns the enum constant of this class with the specified name.
valueOf(String) - Static method in enum class si.ijs.kt.clus.main.settings.section.SettingsPhylogeny.PhylogenyDistanceMeasure
Returns the enum constant of this class with the specified name.
valueOf(String) - Static method in enum class si.ijs.kt.clus.main.settings.section.SettingsPhylogeny.PhylogenySequence
Returns the enum constant of this class with the specified name.
valueOf(String) - Static method in enum class si.ijs.kt.clus.main.settings.section.SettingsRelief.MissingTargetHandling
Returns the enum constant of this class with the specified name.
valueOf(String) - Static method in enum class si.ijs.kt.clus.main.settings.section.SettingsRelief.MultilabelDistance
Returns the enum constant of this class with the specified name.
valueOf(String) - Static method in enum class si.ijs.kt.clus.main.settings.section.SettingsRelief.ReliefStatisticsType
Returns the enum constant of this class with the specified name.
valueOf(String) - Static method in enum class si.ijs.kt.clus.main.settings.section.SettingsRules.CoveringMethod
Returns the enum constant of this class with the specified name.
valueOf(String) - Static method in enum class si.ijs.kt.clus.main.settings.section.SettingsRules.GDExternalMethodValues
Returns the enum constant of this class with the specified name.
valueOf(String) - Static method in enum class si.ijs.kt.clus.main.settings.section.SettingsRules.InitialRuleGeneratingMethod
Returns the enum constant of this class with the specified name.
valueOf(String) - Static method in enum class si.ijs.kt.clus.main.settings.section.SettingsRules.OptimizationGDAddLinearTerms
Returns the enum constant of this class with the specified name.
valueOf(String) - Static method in enum class si.ijs.kt.clus.main.settings.section.SettingsRules.OptimizationGDMTCombineGradient
Returns the enum constant of this class with the specified name.
valueOf(String) - Static method in enum class si.ijs.kt.clus.main.settings.section.SettingsRules.OptimizationLinearTermNormalizeValues
Returns the enum constant of this class with the specified name.
valueOf(String) - Static method in enum class si.ijs.kt.clus.main.settings.section.SettingsRules.OptimizationLossFunction
Returns the enum constant of this class with the specified name.
valueOf(String) - Static method in enum class si.ijs.kt.clus.main.settings.section.SettingsRules.OptimizationNormalization
Returns the enum constant of this class with the specified name.
valueOf(String) - Static method in enum class si.ijs.kt.clus.main.settings.section.SettingsRules.RuleAddingMethod
Returns the enum constant of this class with the specified name.
valueOf(String) - Static method in enum class si.ijs.kt.clus.main.settings.section.SettingsRules.RulePredictionMethod
Returns the enum constant of this class with the specified name.
valueOf(String) - Static method in enum class si.ijs.kt.clus.main.settings.section.SettingsSSL.SSLAggregation
Returns the enum constant of this class with the specified name.
valueOf(String) - Static method in enum class si.ijs.kt.clus.main.settings.section.SettingsSSL.SSLConfidenceMeasure
Returns the enum constant of this class with the specified name.
valueOf(String) - Static method in enum class si.ijs.kt.clus.main.settings.section.SettingsSSL.SSLMethod
Returns the enum constant of this class with the specified name.
valueOf(String) - Static method in enum class si.ijs.kt.clus.main.settings.section.SettingsSSL.SSLNormalization
Returns the enum constant of this class with the specified name.
valueOf(String) - Static method in enum class si.ijs.kt.clus.main.settings.section.SettingsSSL.SSLOOBErrorCalculation
Returns the enum constant of this class with the specified name.
valueOf(String) - Static method in enum class si.ijs.kt.clus.main.settings.section.SettingsSSL.SSLStoppingCriteria
Returns the enum constant of this class with the specified name.
valueOf(String) - Static method in enum class si.ijs.kt.clus.main.settings.section.SettingsSSL.SSLUnlabeledCriteria
Returns the enum constant of this class with the specified name.
valueOf(String) - Static method in enum class si.ijs.kt.clus.main.settings.section.SettingsTimeSeries.TimeSeriesDistanceMeasure
Returns the enum constant of this class with the specified name.
valueOf(String) - Static method in enum class si.ijs.kt.clus.main.settings.section.SettingsTimeSeries.TimeSeriesPrototypeComplexity
Returns the enum constant of this class with the specified name.
valueOf(String) - Static method in enum class si.ijs.kt.clus.main.settings.section.SettingsTree.EntropyType
Returns the enum constant of this class with the specified name.
valueOf(String) - Static method in enum class si.ijs.kt.clus.main.settings.section.SettingsTree.Heuristic
Returns the enum constant of this class with the specified name.
valueOf(String) - Static method in enum class si.ijs.kt.clus.main.settings.section.SettingsTree.InductionOrder
Returns the enum constant of this class with the specified name.
valueOf(String) - Static method in enum class si.ijs.kt.clus.main.settings.section.SettingsTree.MissingClusteringAttributeHandlingType
Returns the enum constant of this class with the specified name.
valueOf(String) - Static method in enum class si.ijs.kt.clus.main.settings.section.SettingsTree.MissingTargetAttributeHandlingType
Returns the enum constant of this class with the specified name.
valueOf(String) - Static method in enum class si.ijs.kt.clus.main.settings.section.SettingsTree.PruningMethod
Returns the enum constant of this class with the specified name.
valueOf(String) - Static method in enum class si.ijs.kt.clus.main.settings.section.SettingsTree.SetDistance
Returns the enum constant of this class with the specified name.
valueOf(String) - Static method in enum class si.ijs.kt.clus.main.settings.section.SettingsTree.SpatialMatrixType
Returns the enum constant of this class with the specified name.
valueOf(String) - Static method in enum class si.ijs.kt.clus.main.settings.section.SettingsTree.SpatialMeasure
Returns the enum constant of this class with the specified name.
valueOf(String) - Static method in enum class si.ijs.kt.clus.main.settings.section.SettingsTree.SplitPositions
Returns the enum constant of this class with the specified name.
valueOf(String) - Static method in enum class si.ijs.kt.clus.main.settings.section.SettingsTree.TimeSeriesDistanceMeasure
Returns the enum constant of this class with the specified name.
valueOf(String) - Static method in enum class si.ijs.kt.clus.main.settings.section.SettingsTree.TreeOptimizeValues
Returns the enum constant of this class with the specified name.
valueOf(String) - Static method in enum class si.ijs.kt.clus.main.settings.section.SettingsTree.TupleDistance
Returns the enum constant of this class with the specified name.
valueOf(String) - Static method in enum class si.ijs.kt.clus.main.settings.SettingsBase.YesNo
Returns the enum constant of this class with the specified name.
values() - Static method in enum class si.ijs.kt.clus.Clus.DebugType
Returns an array containing the constants of this enum class, in the order they are declared.
values() - Static method in enum class si.ijs.kt.clus.data.type.ClusAttrType.AttributeType
Returns an array containing the constants of this enum class, in the order they are declared.
values() - Static method in enum class si.ijs.kt.clus.data.type.ClusAttrType.AttributeUseType
Returns an array containing the constants of this enum class, in the order they are declared.
values() - Static method in enum class si.ijs.kt.clus.data.type.ClusAttrType.Status
Returns an array containing the constants of this enum class, in the order they are declared.
values() - Static method in enum class si.ijs.kt.clus.data.type.ClusAttrType.ValueType
Returns an array containing the constants of this enum class, in the order they are declared.
values() - Static method in enum class si.ijs.kt.clus.error.mlcForHmlc.MLROCAndPRCurve.CurveType
Returns an array containing the constants of this enum class, in the order they are declared.
values() - Static method in enum class si.ijs.kt.clus.ext.ensemble.ClusEnsembleInduce.ParallelTrap
Returns an array containing the constants of this enum class, in the order they are declared.
values() - Static method in enum class si.ijs.kt.clus.main.ClusStatManager.Mode
Returns an array containing the constants of this enum class, in the order they are declared.
values() - Static method in enum class si.ijs.kt.clus.main.ClusStatManager.TargetType
Returns an array containing the constants of this enum class, in the order they are declared.
values() - Static method in enum class si.ijs.kt.clus.main.settings.section.SettingsData.NormalizeDataValues
Returns an array containing the constants of this enum class, in the order they are declared.
values() - Static method in enum class si.ijs.kt.clus.main.settings.section.SettingsEnsemble.EnsembleBootstrapping
Returns an array containing the constants of this enum class, in the order they are declared.
values() - Static method in enum class si.ijs.kt.clus.main.settings.section.SettingsEnsemble.EnsembleMethod
Returns an array containing the constants of this enum class, in the order they are declared.
values() - Static method in enum class si.ijs.kt.clus.main.settings.section.SettingsEnsemble.EnsembleRanking
Returns an array containing the constants of this enum class, in the order they are declared.
values() - Static method in enum class si.ijs.kt.clus.main.settings.section.SettingsEnsemble.EnsembleROSAlgorithmType
Returns an array containing the constants of this enum class, in the order they are declared.
values() - Static method in enum class si.ijs.kt.clus.main.settings.section.SettingsEnsemble.EnsembleROSVotingType
Returns an array containing the constants of this enum class, in the order they are declared.
values() - Static method in enum class si.ijs.kt.clus.main.settings.section.SettingsEnsemble.EnsembleVotingType
Returns an array containing the constants of this enum class, in the order they are declared.
values() - Static method in enum class si.ijs.kt.clus.main.settings.section.SettingsEnsemble.RandomAttributeTypeSelection
Returns an array containing the constants of this enum class, in the order they are declared.
values() - Static method in enum class si.ijs.kt.clus.main.settings.section.SettingsGeneral.ResourceInfoLoad
Returns an array containing the constants of this enum class, in the order they are declared.
values() - Static method in enum class si.ijs.kt.clus.main.settings.section.SettingsHMLC.HierarchyDistance
Returns an array containing the constants of this enum class, in the order they are declared.
values() - Static method in enum class si.ijs.kt.clus.main.settings.section.SettingsHMLC.HierarchyMeasures
Returns an array containing the constants of this enum class, in the order they are declared.
values() - Static method in enum class si.ijs.kt.clus.main.settings.section.SettingsHMLC.HierarchyType
Returns an array containing the constants of this enum class, in the order they are declared.
values() - Static method in enum class si.ijs.kt.clus.main.settings.section.SettingsHMLC.HierarchyWeight
Returns an array containing the constants of this enum class, in the order they are declared.
values() - Static method in enum class si.ijs.kt.clus.main.settings.section.SettingsHMTR.HierarchyAggregationsHMTR
Returns an array containing the constants of this enum class, in the order they are declared.
values() - Static method in enum class si.ijs.kt.clus.main.settings.section.SettingsHMTR.HierarchyDistanceHMTR
Returns an array containing the constants of this enum class, in the order they are declared.
values() - Static method in enum class si.ijs.kt.clus.main.settings.section.SettingsHMTR.HierarchyTypesHMTR
Returns an array containing the constants of this enum class, in the order they are declared.
values() - Static method in enum class si.ijs.kt.clus.main.settings.section.SettingsKNN.Distance
Returns an array containing the constants of this enum class, in the order they are declared.
values() - Static method in enum class si.ijs.kt.clus.main.settings.section.SettingsKNN.DistanceWeights
Returns an array containing the constants of this enum class, in the order they are declared.
values() - Static method in enum class si.ijs.kt.clus.main.settings.section.SettingsKNN.SearchMethod
Returns an array containing the constants of this enum class, in the order they are declared.
values() - Static method in enum class si.ijs.kt.clus.main.settings.section.SettingsMLC.MultiLabelMeasures
Returns an array containing the constants of this enum class, in the order they are declared.
values() - Static method in enum class si.ijs.kt.clus.main.settings.section.SettingsMLC.MultiLabelThresholdOptimization
Returns an array containing the constants of this enum class, in the order they are declared.
values() - Static method in enum class si.ijs.kt.clus.main.settings.section.SettingsOutput.ConvertRules
Returns an array containing the constants of this enum class, in the order they are declared.
values() - Static method in enum class si.ijs.kt.clus.main.settings.section.SettingsOutput.PythonModelType
Returns an array containing the constants of this enum class, in the order they are declared.
values() - Static method in enum class si.ijs.kt.clus.main.settings.section.SettingsOutput.ShowInfo
Returns an array containing the constants of this enum class, in the order they are declared.
values() - Static method in enum class si.ijs.kt.clus.main.settings.section.SettingsOutput.ShowModels
Returns an array containing the constants of this enum class, in the order they are declared.
values() - Static method in enum class si.ijs.kt.clus.main.settings.section.SettingsOutput.WritePredictions
Returns an array containing the constants of this enum class, in the order they are declared.
values() - Static method in enum class si.ijs.kt.clus.main.settings.section.SettingsPhylogeny.PhylogenyCriterion
Returns an array containing the constants of this enum class, in the order they are declared.
values() - Static method in enum class si.ijs.kt.clus.main.settings.section.SettingsPhylogeny.PhylogenyDistanceMeasure
Returns an array containing the constants of this enum class, in the order they are declared.
values() - Static method in enum class si.ijs.kt.clus.main.settings.section.SettingsPhylogeny.PhylogenySequence
Returns an array containing the constants of this enum class, in the order they are declared.
values() - Static method in enum class si.ijs.kt.clus.main.settings.section.SettingsRelief.MissingTargetHandling
Returns an array containing the constants of this enum class, in the order they are declared.
values() - Static method in enum class si.ijs.kt.clus.main.settings.section.SettingsRelief.MultilabelDistance
Returns an array containing the constants of this enum class, in the order they are declared.
values() - Static method in enum class si.ijs.kt.clus.main.settings.section.SettingsRelief.ReliefStatisticsType
Returns an array containing the constants of this enum class, in the order they are declared.
values() - Static method in enum class si.ijs.kt.clus.main.settings.section.SettingsRules.CoveringMethod
Returns an array containing the constants of this enum class, in the order they are declared.
values() - Static method in enum class si.ijs.kt.clus.main.settings.section.SettingsRules.GDExternalMethodValues
Returns an array containing the constants of this enum class, in the order they are declared.
values() - Static method in enum class si.ijs.kt.clus.main.settings.section.SettingsRules.InitialRuleGeneratingMethod
Returns an array containing the constants of this enum class, in the order they are declared.
values() - Static method in enum class si.ijs.kt.clus.main.settings.section.SettingsRules.OptimizationGDAddLinearTerms
Returns an array containing the constants of this enum class, in the order they are declared.
values() - Static method in enum class si.ijs.kt.clus.main.settings.section.SettingsRules.OptimizationGDMTCombineGradient
Returns an array containing the constants of this enum class, in the order they are declared.
values() - Static method in enum class si.ijs.kt.clus.main.settings.section.SettingsRules.OptimizationLinearTermNormalizeValues
Returns an array containing the constants of this enum class, in the order they are declared.
values() - Static method in enum class si.ijs.kt.clus.main.settings.section.SettingsRules.OptimizationLossFunction
Returns an array containing the constants of this enum class, in the order they are declared.
values() - Static method in enum class si.ijs.kt.clus.main.settings.section.SettingsRules.OptimizationNormalization
Returns an array containing the constants of this enum class, in the order they are declared.
values() - Static method in enum class si.ijs.kt.clus.main.settings.section.SettingsRules.RuleAddingMethod
Returns an array containing the constants of this enum class, in the order they are declared.
values() - Static method in enum class si.ijs.kt.clus.main.settings.section.SettingsRules.RulePredictionMethod
Returns an array containing the constants of this enum class, in the order they are declared.
values() - Static method in enum class si.ijs.kt.clus.main.settings.section.SettingsSSL.SSLAggregation
Returns an array containing the constants of this enum class, in the order they are declared.
values() - Static method in enum class si.ijs.kt.clus.main.settings.section.SettingsSSL.SSLConfidenceMeasure
Returns an array containing the constants of this enum class, in the order they are declared.
values() - Static method in enum class si.ijs.kt.clus.main.settings.section.SettingsSSL.SSLMethod
Returns an array containing the constants of this enum class, in the order they are declared.
values() - Static method in enum class si.ijs.kt.clus.main.settings.section.SettingsSSL.SSLNormalization
Returns an array containing the constants of this enum class, in the order they are declared.
values() - Static method in enum class si.ijs.kt.clus.main.settings.section.SettingsSSL.SSLOOBErrorCalculation
Returns an array containing the constants of this enum class, in the order they are declared.
values() - Static method in enum class si.ijs.kt.clus.main.settings.section.SettingsSSL.SSLStoppingCriteria
Returns an array containing the constants of this enum class, in the order they are declared.
values() - Static method in enum class si.ijs.kt.clus.main.settings.section.SettingsSSL.SSLUnlabeledCriteria
Returns an array containing the constants of this enum class, in the order they are declared.
values() - Static method in enum class si.ijs.kt.clus.main.settings.section.SettingsTimeSeries.TimeSeriesDistanceMeasure
Returns an array containing the constants of this enum class, in the order they are declared.
values() - Static method in enum class si.ijs.kt.clus.main.settings.section.SettingsTimeSeries.TimeSeriesPrototypeComplexity
Returns an array containing the constants of this enum class, in the order they are declared.
values() - Static method in enum class si.ijs.kt.clus.main.settings.section.SettingsTree.EntropyType
Returns an array containing the constants of this enum class, in the order they are declared.
values() - Static method in enum class si.ijs.kt.clus.main.settings.section.SettingsTree.Heuristic
Returns an array containing the constants of this enum class, in the order they are declared.
values() - Static method in enum class si.ijs.kt.clus.main.settings.section.SettingsTree.InductionOrder
Returns an array containing the constants of this enum class, in the order they are declared.
values() - Static method in enum class si.ijs.kt.clus.main.settings.section.SettingsTree.MissingClusteringAttributeHandlingType
Returns an array containing the constants of this enum class, in the order they are declared.
values() - Static method in enum class si.ijs.kt.clus.main.settings.section.SettingsTree.MissingTargetAttributeHandlingType
Returns an array containing the constants of this enum class, in the order they are declared.
values() - Static method in enum class si.ijs.kt.clus.main.settings.section.SettingsTree.PruningMethod
Returns an array containing the constants of this enum class, in the order they are declared.
values() - Static method in enum class si.ijs.kt.clus.main.settings.section.SettingsTree.SetDistance
Returns an array containing the constants of this enum class, in the order they are declared.
values() - Static method in enum class si.ijs.kt.clus.main.settings.section.SettingsTree.SpatialMatrixType
Returns an array containing the constants of this enum class, in the order they are declared.
values() - Static method in enum class si.ijs.kt.clus.main.settings.section.SettingsTree.SpatialMeasure
Returns an array containing the constants of this enum class, in the order they are declared.
values() - Static method in enum class si.ijs.kt.clus.main.settings.section.SettingsTree.SplitPositions
Returns an array containing the constants of this enum class, in the order they are declared.
values() - Static method in enum class si.ijs.kt.clus.main.settings.section.SettingsTree.TimeSeriesDistanceMeasure
Returns an array containing the constants of this enum class, in the order they are declared.
values() - Static method in enum class si.ijs.kt.clus.main.settings.section.SettingsTree.TreeOptimizeValues
Returns an array containing the constants of this enum class, in the order they are declared.
values() - Static method in enum class si.ijs.kt.clus.main.settings.section.SettingsTree.TupleDistance
Returns an array containing the constants of this enum class, in the order they are declared.
values() - Static method in enum class si.ijs.kt.clus.main.settings.SettingsBase.YesNo
Returns an array containing the constants of this enum class, in the order they are declared.
VAR - Enum constant in enum class si.ijs.kt.clus.main.settings.section.SettingsHMTR.HierarchyAggregationsHMTR
 
variance() - Method in class si.ijs.kt.clus.algo.kNN.distance.valentin.NumericStatistic
 
variance(double[]) - Static method in class si.ijs.kt.clus.util.ClusUtil
 
Variance - Class in si.ijs.kt.clus.ext.featureRanking.relief.statistics
 
Variance - Enum constant in enum class si.ijs.kt.clus.main.settings.section.SettingsRelief.ReliefStatisticsType
 
Variance - Enum constant in enum class si.ijs.kt.clus.main.settings.section.SettingsSSL.SSLConfidenceMeasure
Variance - standard deviation of votes of ensemble
Variance(ClusReliefFeatureRanking, int, int, int) - Constructor for class si.ijs.kt.clus.ext.featureRanking.relief.statistics.Variance
 
VarianceReduction - Enum constant in enum class si.ijs.kt.clus.main.settings.section.SettingsTree.Heuristic
 
VarianceReductionGIS - Enum constant in enum class si.ijs.kt.clus.main.settings.section.SettingsTree.Heuristic
 
VarianceReductionHeuristic - Class in si.ijs.kt.clus.heuristic
 
VarianceReductionHeuristic(String, ClusStatistic, ClusAttributeWeights, Settings) - Constructor for class si.ijs.kt.clus.heuristic.VarianceReductionHeuristic
 
VarianceReductionHeuristic(ClusStatistic, ClusAttributeWeights, Settings) - Constructor for class si.ijs.kt.clus.heuristic.VarianceReductionHeuristic
 
VarianceReductionHeuristicCompatibility - Class in si.ijs.kt.clus.heuristic
 
VarianceReductionHeuristicCompatibility(String, ClusStatistic, ClusAttributeWeights, Settings) - Constructor for class si.ijs.kt.clus.heuristic.VarianceReductionHeuristicCompatibility
 
VarianceReductionHeuristicCompatibility(ClusStatistic, ClusAttributeWeights, Settings) - Constructor for class si.ijs.kt.clus.heuristic.VarianceReductionHeuristicCompatibility
 
VarianceReductionHeuristicEfficient - Class in si.ijs.kt.clus.heuristic
 
VarianceReductionHeuristicEfficient(ClusAttributeWeights, ClusAttrType[], Settings) - Constructor for class si.ijs.kt.clus.heuristic.VarianceReductionHeuristicEfficient
 
VarianceReductionHeuristicInclMissingValues - Class in si.ijs.kt.clus.heuristic
 
VarianceReductionHeuristicInclMissingValues(ClusAttributeWeights, ClusAttrType[], ClusStatistic, Settings) - Constructor for class si.ijs.kt.clus.heuristic.VarianceReductionHeuristicInclMissingValues
 
VarianceReductionMissing - Enum constant in enum class si.ijs.kt.clus.main.settings.section.SettingsTree.Heuristic
 
VarianceScore - Class in si.ijs.kt.clus.ext.semisupervised.confidence.regression
Calculates the confidence of predictions as standard deviation of votes of the trees in random forest tree ensemble.
VarianceScore(ClusStatManager, SettingsSSL.SSLNormalization, SettingsSSL.SSLAggregation) - Constructor for class si.ijs.kt.clus.ext.semisupervised.confidence.regression.VarianceScore
 
VectorDistance - Class in si.ijs.kt.clus.algo.kNN.distance.valentin
This class represents distances between DataTuples
VectorDistance(ClusAttrType[], double[]) - Constructor for class si.ijs.kt.clus.algo.kNN.distance.valentin.VectorDistance
 
vectorToAttrArray(ArrayList) - Static method in class si.ijs.kt.clus.data.ClusSchema
 
vectorToNominalAttrArray(ArrayList) - Static method in class si.ijs.kt.clus.data.ClusSchema
 
vectorToNumericAttrArray(ArrayList) - Static method in class si.ijs.kt.clus.data.ClusSchema
 
vectorToTimeSeriesAttrArray(ArrayList) - Static method in class si.ijs.kt.clus.data.ClusSchema
 
Visitable - Class in si.ijs.kt.clus.util.jeans.util
 
Visitable() - Constructor for class si.ijs.kt.clus.util.jeans.util.Visitable
 
VisitableNode - Class in si.ijs.kt.clus.util.jeans.tree
 
VisitableNode(Node) - Constructor for class si.ijs.kt.clus.util.jeans.tree.VisitableNode
 
visitor - Variable in class si.ijs.kt.clus.ext.beamsearch.ClusBeamSizeConstraintInfo
 
visitors - Variable in class si.ijs.kt.clus.util.jeans.util.Visitable
 
vote(ArrayList) - Method in class si.ijs.kt.clus.statistic.CombStatClassRegHier
 
vote(ArrayList<ClusStatistic>) - Method in class si.ijs.kt.clus.error.common.multiscore.MultiScoreStat
 
vote(ArrayList<ClusStatistic>) - Method in class si.ijs.kt.clus.statistic.BitVectorStat
 
vote(ArrayList<ClusStatistic>) - Method in class si.ijs.kt.clus.statistic.ClassificationStat
 
vote(ArrayList<ClusStatistic>) - Method in class si.ijs.kt.clus.statistic.ClusStatistic
 
vote(ArrayList<ClusStatistic>) - Method in class si.ijs.kt.clus.statistic.CombStat
 
vote(ArrayList<ClusStatistic>) - Method in class si.ijs.kt.clus.statistic.RegressionStatBase
 
vote(ArrayList<ClusStatistic>) - Method in class si.ijs.kt.clus.statistic.WHTDStatistic
 
vote(ArrayList<ClusStatistic>, ClusOOBWeights) - Method in class si.ijs.kt.clus.error.common.multiscore.MultiScoreStat
 
vote(ArrayList<ClusStatistic>, ClusOOBWeights) - Method in class si.ijs.kt.clus.statistic.BitVectorStat
 
vote(ArrayList<ClusStatistic>, ClusOOBWeights) - Method in class si.ijs.kt.clus.statistic.ClassificationStat
 
vote(ArrayList<ClusStatistic>, ClusOOBWeights) - Method in class si.ijs.kt.clus.statistic.ClusStatistic
 
vote(ArrayList<ClusStatistic>, ClusOOBWeights) - Method in class si.ijs.kt.clus.statistic.CombStat
 
vote(ArrayList<ClusStatistic>, ClusOOBWeights) - Method in class si.ijs.kt.clus.statistic.RegressionStatBase
 
vote(ArrayList<ClusStatistic>, ClusOOBWeights, ClusROSForestInfo) - Method in class si.ijs.kt.clus.error.common.multiscore.MultiScoreStat
 
vote(ArrayList<ClusStatistic>, ClusOOBWeights, ClusROSForestInfo) - Method in class si.ijs.kt.clus.statistic.BitVectorStat
 
vote(ArrayList<ClusStatistic>, ClusOOBWeights, ClusROSForestInfo) - Method in class si.ijs.kt.clus.statistic.ClassificationStat
 
vote(ArrayList<ClusStatistic>, ClusOOBWeights, ClusROSForestInfo) - Method in class si.ijs.kt.clus.statistic.ClusStatistic
 
vote(ArrayList<ClusStatistic>, ClusOOBWeights, ClusROSForestInfo) - Method in class si.ijs.kt.clus.statistic.CombStat
 
vote(ArrayList<ClusStatistic>, ClusOOBWeights, ClusROSForestInfo) - Method in class si.ijs.kt.clus.statistic.RegressionStatBase
 
vote(ArrayList<ClusStatistic>, ClusROSForestInfo) - Method in class si.ijs.kt.clus.error.common.multiscore.MultiScoreStat
 
vote(ArrayList<ClusStatistic>, ClusROSForestInfo) - Method in class si.ijs.kt.clus.statistic.BitVectorStat
 
vote(ArrayList<ClusStatistic>, ClusROSForestInfo) - Method in class si.ijs.kt.clus.statistic.ClassificationStat
 
vote(ArrayList<ClusStatistic>, ClusROSForestInfo) - Method in class si.ijs.kt.clus.statistic.ClusStatistic
 
vote(ArrayList<ClusStatistic>, ClusROSForestInfo) - Method in class si.ijs.kt.clus.statistic.CombStat
 
vote(ArrayList<ClusStatistic>, ClusROSForestInfo) - Method in class si.ijs.kt.clus.statistic.RegressionStatBase
 
voteMajority(ArrayList<ClusStatistic>) - Method in class si.ijs.kt.clus.statistic.ClassificationStat
 
voteMajority(ArrayList<ClusStatistic>, ClusROSForestInfo) - Method in class si.ijs.kt.clus.statistic.ClassificationStat
 
voteProbDistr(ArrayList<ClusStatistic>) - Method in class si.ijs.kt.clus.statistic.ClassificationStat
 
voteProbDistr(ArrayList<ClusStatistic>, ClusROSForestInfo) - Method in class si.ijs.kt.clus.statistic.ClassificationStat
 
VPItem - Class in si.ijs.kt.clus.algo.kNN.methods.vpTree
 
VPItem(DataTuple) - Constructor for class si.ijs.kt.clus.algo.kNN.methods.vpTree.VPItem
 
VPNode - Class in si.ijs.kt.clus.algo.kNN.methods.vpTree
 
VPNode(VPItem) - Constructor for class si.ijs.kt.clus.algo.kNN.methods.vpTree.VPNode
Constructs new VPNode.
VPTree - Class in si.ijs.kt.clus.algo.kNN.methods.vpTree
 
VPTree - Enum constant in enum class si.ijs.kt.clus.main.settings.section.SettingsKNN.SearchMethod
 
VPTree(ClusRun, SearchDistance) - Constructor for class si.ijs.kt.clus.algo.kNN.methods.vpTree.VPTree
 

W

WAHNDError - Class in si.ijs.kt.clus.error
 
WAHNDError(ClusErrorList, double) - Constructor for class si.ijs.kt.clus.error.WAHNDError
 
WAHNDError(ClusErrorList, double, String) - Constructor for class si.ijs.kt.clus.error.WAHNDError
 
weight(int, int, float) - Static method in class si.ijs.kt.clus.addon.network.PredictionAnalyzer
 
weight(DataTuple) - Method in class si.ijs.kt.clus.algo.kNN.distance.distanceWeighting.DistanceWeighting
Return distance weight for tuple el.
weight(DataTuple) - Method in class si.ijs.kt.clus.algo.kNN.distance.distanceWeighting.WeightConstant
 
weight(DataTuple) - Method in class si.ijs.kt.clus.algo.kNN.distance.distanceWeighting.WeightMinus
 
weight(DataTuple) - Method in class si.ijs.kt.clus.algo.kNN.distance.distanceWeighting.WeightOver
 
WEIGHT_OBJECTIVE_ACCURACY - Variable in class si.ijs.kt.clus.algo.rules.probabilistic.ClusRuleProbabilisticRuleSetInduceWeights
 
WEIGHT_OBJECTIVE_CARDINALITY - Variable in class si.ijs.kt.clus.algo.rules.probabilistic.ClusRuleProbabilisticRuleSetInduceWeights
 
WEIGHT_OBJECTIVE_CORRECT_COVER - Variable in class si.ijs.kt.clus.algo.rules.probabilistic.ClusRuleProbabilisticRuleSetInduceWeights
 
WEIGHT_OBJECTIVE_INCORRECT_COVER - Variable in class si.ijs.kt.clus.algo.rules.probabilistic.ClusRuleProbabilisticRuleSetInduceWeights
 
WEIGHT_OBJECTIVE_OVERLAP - Variable in class si.ijs.kt.clus.algo.rules.probabilistic.ClusRuleProbabilisticRuleSetInduceWeights
 
WEIGHT_OBJECTIVE_SIZE - Variable in class si.ijs.kt.clus.algo.rules.probabilistic.ClusRuleProbabilisticRuleSetInduceWeights
default weights
WeightConstant - Class in si.ijs.kt.clus.algo.kNN.distance.distanceWeighting
 
WeightConstant(LinkedList<DataTuple>, SearchAlgorithm, DataTuple) - Constructor for class si.ijs.kt.clus.algo.kNN.distance.distanceWeighting.WeightConstant
Inicialize new distance weigthing schem for set of tuples, selected algorithm and interested tuple.
WeightedAdditive - Enum constant in enum class si.ijs.kt.clus.main.settings.section.SettingsRules.CoveringMethod
 
weightedAUPRC - Enum constant in enum class si.ijs.kt.clus.error.mlcForHmlc.MLROCAndPRCurve.CurveType
 
weightedAUPRC - Static variable in class si.ijs.kt.clus.error.mlc.MLROCAndPRCurve
 
WeightedAverageAUPRC - Enum constant in enum class si.ijs.kt.clus.main.settings.section.SettingsHMLC.HierarchyMeasures
 
WeightedAverageAUPRC - Enum constant in enum class si.ijs.kt.clus.main.settings.section.SettingsMLC.MultiLabelMeasures
 
WeightedError - Enum constant in enum class si.ijs.kt.clus.main.settings.section.SettingsRules.CoveringMethod
 
WeightedEuclidean - Enum constant in enum class si.ijs.kt.clus.main.settings.section.SettingsHMLC.HierarchyDistance
 
WeightedEuclidean - Enum constant in enum class si.ijs.kt.clus.main.settings.section.SettingsHMTR.HierarchyDistanceHMTR
 
WeightedMultiplicative - Enum constant in enum class si.ijs.kt.clus.main.settings.section.SettingsRules.CoveringMethod
'Weighted' coverings: unordered rules
WeightMinus - Class in si.ijs.kt.clus.algo.kNN.distance.distanceWeighting
 
WeightMinus(LinkedList<DataTuple>, SearchAlgorithm, DataTuple) - Constructor for class si.ijs.kt.clus.algo.kNN.distance.distanceWeighting.WeightMinus
Inicialize new distance weigthing schem for set of tuples, selected algorithm and interested tuple.
WeightOver - Class in si.ijs.kt.clus.algo.kNN.distance.distanceWeighting
 
WeightOver(LinkedList<DataTuple>, SearchAlgorithm, DataTuple) - Constructor for class si.ijs.kt.clus.algo.kNN.distance.distanceWeighting.WeightOver
Inicialize new distance weigthing schem for set of tuples, selected algorithm and interested tuple.
WHTDStatistic - Class in si.ijs.kt.clus.statistic
 
WHTDStatistic(Settings, ClassHierarchy) - Constructor for class si.ijs.kt.clus.statistic.WHTDStatistic
Constructor for poolAUPRC case
WHTDStatistic(Settings, ClassHierarchy, boolean) - Constructor for class si.ijs.kt.clus.statistic.WHTDStatistic
 
writeArff(String, RowData) - Static method in class si.ijs.kt.clus.data.io.ARFFFile
 
writeArffHeader(PrintWriter, ClusSchema) - Static method in class si.ijs.kt.clus.data.io.ARFFFile
 
writeArffHeaderToSC(PrintWriter, ClusSchema, String[], boolean) - Static method in class si.ijs.kt.clus.addon.hmc.HMCConvertToSC.HMCConvertToSC
 
writeArffToSC(String, RowData, String[], boolean[][], boolean) - Static method in class si.ijs.kt.clus.addon.hmc.HMCConvertToSC.HMCConvertToSC
 
writeARFFType(PrintWriter) - Method in class si.ijs.kt.clus.data.type.ClusAttrType
 
writeARFFType(PrintWriter) - Method in class si.ijs.kt.clus.data.type.complex.SetAttrType
 
writeARFFType(PrintWriter) - Method in class si.ijs.kt.clus.data.type.complex.TupleAttrType
 
writeARFFType(PrintWriter) - Method in class si.ijs.kt.clus.data.type.hierarchies.ClassesAttrType
 
writeARFFType(PrintWriter) - Method in class si.ijs.kt.clus.data.type.primitive.NominalAttrType
 
writeARFFType(PrintWriter) - Method in class si.ijs.kt.clus.data.type.primitive.NumericAttrType
 
writeARFFType(PrintWriter) - Method in class si.ijs.kt.clus.data.type.primitive.StringAttrType
 
writeARFFType(PrintWriter) - Method in class si.ijs.kt.clus.data.type.primitive.TimeSeriesAttrType
 
writeBrief(ClusRun) - Method in class si.ijs.kt.clus.main.ClusOutput
 
writeCSVFilesPR(String) - Method in class si.ijs.kt.clus.error.hmlc.HierErrorMeasures
 
writeCSVFilesROC(String) - Method in class si.ijs.kt.clus.error.hmlc.HierErrorMeasures
 
writeDescriptive(PrintWriter) - Method in class si.ijs.kt.clus.data.rows.DataTuple
Writes tuple's descriptive attributes in comma separated format
writeDistributionForInternalNode(PrintWriter, StatisticPrintInfo) - Method in class si.ijs.kt.clus.algo.tdidt.ClusNode
 
writeDistributionForInternalNode(PrintWriter, StatisticPrintInfo) - Method in class si.ijs.kt.clus.ext.optiontree.ClusOptionNode
 
writeExamples(RowData, ClassHierarchy) - Static method in class si.ijs.kt.clus.ext.hierarchical.HierMatrixOutput
 
writeFile(ClusNode) - Method in class si.ijs.kt.clus.algo.tdidt.processor.NodeExampleCollector
 
writeHeader() - Method in class si.ijs.kt.clus.addon.sit.ErrorOutput
 
writeHeader() - Method in class si.ijs.kt.clus.error.common.ClusErrorOutput
 
writeHeader() - Method in class si.ijs.kt.clus.main.ClusOutput
 
writeHeader(ClassHierarchy, PrintWriter) - Static method in class si.ijs.kt.clus.ext.hierarchical.HierMatrixOutput
 
writeHeader(Settings) - Method in class si.ijs.kt.clus.ext.beamsearch.ClusBeamSimilarityOutput
 
writeHierarchy(int, ClassTerm, PrintWriter) - Method in class si.ijs.kt.clus.ext.hierarchical.HierIO
 
writeHierarchy(ClassTerm) - Method in class si.ijs.kt.clus.ext.hierarchical.HierIO
 
writeHierarchy(ClassTerm, PrintWriter) - Method in class si.ijs.kt.clus.ext.hierarchical.HierIO
 
writeJSON(ClusRun) - Method in class si.ijs.kt.clus.ext.featureRanking.ClusFeatureRanking
 
writeModel(ClusModelCollectionIO) - Method in class si.ijs.kt.clus.algo.ClusInductionAlgorithm
 
writeModel(ClusModelCollectionIO) - Method in class si.ijs.kt.clus.ext.beamsearch.ClusBeamInduce
 
writeModel(ClusModelCollectionIO) - Method in class si.ijs.kt.clus.ext.beamsearch.ClusBeamSearch
 
writeModel(ClusModelCollectionIO) - Method in class si.ijs.kt.clus.ext.exhaustivesearch.ClusExhaustiveInduce
 
writeModel(ClusModelCollectionIO) - Method in class si.ijs.kt.clus.ext.exhaustivesearch.ClusExhaustiveSearch
 
writeObject(Object) - Method in class si.ijs.kt.clus.util.jeans.io.ObjectSaveStream
 
writeOutput(ClusRun, boolean) - Method in class si.ijs.kt.clus.main.ClusOutput
 
writeOutput(ClusRun, boolean, boolean) - Method in class si.ijs.kt.clus.main.ClusOutput
 
writeOutput(ClusRun, boolean, boolean, double[]) - Method in class si.ijs.kt.clus.error.common.ClusErrorOutput
 
writePredictionsForTuple(DataTuple, ClusStatistic) - Method in class si.ijs.kt.clus.model.processor.ClusEnsemblePredictionWriter
 
writePrologGraph(String, ClassTerm, PrintWriter) - Static method in class si.ijs.kt.clus.ext.hierarchical.HierIO
 
writePrologTerm(ClassTerm, boolean[], PrintWriter) - Static method in class si.ijs.kt.clus.ext.hierarchical.HierIO
 
writePrologTerm(ClassTerm, PrintWriter) - Static method in class si.ijs.kt.clus.ext.hierarchical.HierIO
 
writePythonAggregation(PrintWriter, String, ClusStatManager.TargetType) - Static method in class si.ijs.kt.clus.ext.ensemble.ClusForest
 
writePythonEnsembleFile(PrintWriter, String, SettingsOutput.PythonModelType) - Method in class si.ijs.kt.clus.ext.ensemble.ClusForest
Adds an ensemble predictor to python models file.
writeRanking(String) - Method in class si.ijs.kt.clus.ext.featureRanking.ClusFeatureRanking
Writes fimp with where the attributes appear in the order that was chosen (as in the dataset or sorted by relevance).
writeRDataNominalLabels(String, RowData) - Static method in class si.ijs.kt.clus.data.io.ARFFFile
 
writeStream(InputStream) - Static method in class si.ijs.kt.clus.ext.ilevelc.MPCKMeansWrapper
 
writeSummary(ClusSummary) - Method in class si.ijs.kt.clus.main.ClusOutput
 
writeTarget(PrintWriter) - Method in class si.ijs.kt.clus.data.rows.DataTuple
Writes tuple's target attributes in comma separated format
writeTargets() - Method in class si.ijs.kt.clus.Clus
 
writeTargets(RowData, ClusSchema, String) - Method in class si.ijs.kt.clus.ext.hierarchical.ClassHierarchy
 
writeTuple(PrintWriter) - Method in class si.ijs.kt.clus.data.rows.DataTuple
 
writeTuple(PrintWriter) - Method in class si.ijs.kt.clus.data.rows.SparseDataTuple
 
writingLock() - Method in class si.ijs.kt.clus.ext.ensemble.ClusReadWriteLock
 
writingUnlock() - Method in class si.ijs.kt.clus.ext.ensemble.ClusReadWriteLock
 

X

xtAx(double[]) - Method in class si.ijs.kt.clus.util.jeans.math.matrix.MSymMatrix
 
xtAx(MySparseVector) - Method in class si.ijs.kt.clus.util.jeans.math.matrix.MSymMatrix
 
xtAx_delta(double[], double[]) - Method in class si.ijs.kt.clus.util.jeans.math.matrix.MSymMatrix
 
XVAL_OVERLAP - Static variable in class si.ijs.kt.clus.main.settings.section.SettingsExperimental
 
XVAL_PREDS - Static variable in class si.ijs.kt.clus.model.ClusModelInfo
 
XValDataSelection - Class in si.ijs.kt.clus.selection
 
XValDataSelection(IndexAttrType) - Constructor for class si.ijs.kt.clus.selection.XValDataSelection
 
XValGroup - Class in si.ijs.kt.clus.selection
 
XValGroup(int) - Constructor for class si.ijs.kt.clus.selection.XValGroup
 
xvalInduce(OptXValGroup) - Method in class si.ijs.kt.clus.ext.optxval.OptXValIndNO
 
xvalInduce(OptXValGroup) - Method in class si.ijs.kt.clus.ext.optxval.OptXValIndOV
Deprecated.
 
xvalInduce(OptXValGroup) - Method in class si.ijs.kt.clus.ext.optxval.OptXValInduce
 
xvalInduce(OptXValNode, OptXValGroup) - Method in class si.ijs.kt.clus.ext.optxval.OptXValIndNO
 
xvalInduce(OptXValNode, OptXValGroup) - Method in class si.ijs.kt.clus.ext.optxval.OptXValIndOV
Deprecated.
 
XValMainSelection - Class in si.ijs.kt.clus.selection
 
XValMainSelection(int, int) - Constructor for class si.ijs.kt.clus.selection.XValMainSelection
 
XValRandomSelection - Class in si.ijs.kt.clus.selection
 
XValRandomSelection(int, int) - Constructor for class si.ijs.kt.clus.selection.XValRandomSelection
 
XValRandomSelection(int, int, Random) - Constructor for class si.ijs.kt.clus.selection.XValRandomSelection
 
xvalRun(String, Date) - Method in class si.ijs.kt.clus.ext.optxval.OptXVal
Deprecated.
 
xvalRun(ClusInductionAlgorithmType) - Method in class si.ijs.kt.clus.Clus
 
XValRun() - Method in class si.ijs.kt.clus.addon.sit.Sit
 
XValSelection - Class in si.ijs.kt.clus.selection
 
XValSelection(XValMainSelection, int) - Constructor for class si.ijs.kt.clus.selection.XValSelection
 

Y

YATSXValRun() - Method in class si.ijs.kt.clus.addon.sit.Sit
 
Yes - Enum constant in enum class si.ijs.kt.clus.main.settings.section.SettingsEnsemble.EnsembleBootstrapping
 
Yes - Enum constant in enum class si.ijs.kt.clus.main.settings.section.SettingsGeneral.ResourceInfoLoad
 
Yes - Enum constant in enum class si.ijs.kt.clus.main.settings.section.SettingsMLC.MultiLabelThresholdOptimization
 
Yes - Enum constant in enum class si.ijs.kt.clus.main.settings.section.SettingsRules.OptimizationGDAddLinearTerms
Add linear terms explicitly.
Yes - Enum constant in enum class si.ijs.kt.clus.main.settings.section.SettingsRules.OptimizationLinearTermNormalizeValues
Normalize linear terms for optimization and leave the normalization to the resulting rule ensemble.
Yes - Enum constant in enum class si.ijs.kt.clus.main.settings.section.SettingsRules.OptimizationNormalization
Normalize during optimization with 2*std dev and shifting with average.
Yes - Enum constant in enum class si.ijs.kt.clus.main.settings.SettingsBase.YesNo
 
YES - Static variable in class si.ijs.kt.clus.algo.tdidt.ClusNode
 
YesAndConvert - Enum constant in enum class si.ijs.kt.clus.main.settings.section.SettingsRules.OptimizationLinearTermNormalizeValues
Normalize linear terms for optimization, but after optimization convert the linear terms to plain terms without normalization without changing the resulting prediction.
YESNO - Static variable in class si.ijs.kt.clus.model.io.ClusTreeReader
 
YesSaveMemory - Enum constant in enum class si.ijs.kt.clus.main.settings.section.SettingsRules.OptimizationGDAddLinearTerms
Use linear terms in optimization, but add them explicitly after optimization (if weight is zero).
YesVariance - Enum constant in enum class si.ijs.kt.clus.main.settings.section.SettingsRules.OptimizationNormalization
Normalize during optimization with variance.

Z

zero - Variable in class si.ijs.kt.clus.data.rows.RowDataSortHelper
 
Zero - Enum constant in enum class si.ijs.kt.clus.main.settings.section.SettingsTree.MissingTargetAttributeHandlingType
variance will not be estimated, while mean (i.e., prediction) will be equal to zero
ZERO - Enum constant in enum class si.ijs.kt.clus.main.settings.section.SettingsHMTR.HierarchyAggregationsHMTR
 
ZeroOneError - Enum constant in enum class si.ijs.kt.clus.main.settings.section.SettingsRules.OptimizationLossFunction
Optimization Loss function type.
zipOpen(String) - Method in class si.ijs.kt.clus.data.io.ClusReader
 
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